New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 5743351 (0.010)235 (1.540) 103/276 0.0 99.6% coding (380/384 nt) ybcQ DLP12 prophage; putative antitermination protein
?NC_000913 574591 = NA (NA)noncoding (1195/1195 nt) IS5 repeat region

Only 100 of 236 total aligned reads displayed.

TCATGTCACTGGCAGGTAAGCATTGCTGCTCTGATGGTTATATCGGGAAAAGGTTACAGAAGGCTGAGGGCATAATTGAAGGGATGTTAATGGCATTAGATATCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAATTAATATGCCAATTGTTTACTAAAAATTATTAAAAATGGGGCGTTGAGACGCCCCCAAAAATAAAGGGTAATATATAACAGAAGGTTTATATAGTTAGAAGCAAGGTTGTGCTTCTAAAGGAAGTGGCTTGAGGGAGCC  >  NC_000913/574197‑574474
                                                                                                                                          |                                                                                                                                           
  aTGTCACTGGCAGGTAAGCATTGCTGCTCTGATGGTTATATCGGGAAAAGGTTACAGAAGGCTGAGGGCATAATTGAAGGGATGTTAATGGCATTAGATATCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAAgga                                                                                                                                          >  1:785087‑M1/1‑137 (MQ=255)
  aTGTCACTGGCAGGTAAGCATTGCTGCTCTGATGGCTATATCGGGAAAAGGTTACAGAAGGCTGAGGGCATAATTGAAGGGATGTTAATGGCATTAGATATCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAAgga                                                                                                                                          >  1:1632191‑M1/1‑137 (MQ=255)
    gTCACTGGCAGGTAAGCATTGCTGCTCTGATGGTTATATCGGGAAAAGGTTACAGAAGGCTGAGGGCATAATTGAAGGGATGTTAATGGCATTAGATATCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAAggaag                                                                                                                                        <  1:2372946‑M1/140‑6 (MQ=255)
      cACTGGCAGGTAAGCATTGCTGCTCTGATGGTTATATCGGGAAAAGGTTACAGAAGGCTGAGGGCATAATTGAAGGGATGTTAATGGCATTAGATATCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAAggaaggt                                                                                                                                      <  1:771406‑M1/140‑8 (MQ=255)
        cTGGCAGGTAAGCATTGCTGCTCTGATGGTTATATCGGGAAAAGGTTACAGAAGGCTGAGGGCATAATTGAAGGGATGTTAATGGCATTAGATATCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAAggaaggtgc                                                                                                                                    >  1:1692157‑M1/1‑131 (MQ=255)
         tGGCAGGTAAGCATTGCTGCTCTGATGGTTATATCGGGAAAAGGTTACAGAAGGCTGAGGGCATAATTGAAGGGATGTTAATGGCATTAGATATCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAAggaaggtgcg                                                                                                                                   >  1:125493‑M1/1‑130 (MQ=255)
         tGGCAGGTAAGCATTGCTGCTCTGATGGTTATATCGGGAAAAGGTTACAGAAGGCTGAGGGCATAATTGAAGGGATGTTAATGGCATTAGATATCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAAggaaggtgcg                                                                                                                                   >  2:2308847‑M1/1‑130 (MQ=255)
         tGGCAGGTAAGCATTGCTGCTCTGATGGTTATATCGGGAAAAGGTTACAGAAGGCTGAGGGCATAATTGAAGGGATGTTAATGGCATTAGATACCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAAggaaggtgcg                                                                                                                                   >  2:213985‑M1/1‑130 (MQ=255)
               gTAAGCATTGCTGCTCTGATGGTTATATCGGGAAAAGGTTACAGAAGGCTGAGGGCATAATTGAAGGGATGTTAATGGCATTAGATATCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAAggaaggtgcgaataag                                                                                                                             <  1:2323354‑M1/140‑17 (MQ=255)
               gTAAGCATTGCTGCTCTGATGGTTATATCGGGAAAAGGTTACAGAAGGCTGAGGGCATAATTGAAGGGATGTTAATGGCATTAGATATCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAAggaaggtgcgaataag                                                                                                                             >  1:1577965‑M1/1‑124 (MQ=255)
                  aGCATTGCTGCTCTGATGGTTATATCGGGAAAAGGTTACAGAAGGCTGAGGGCATAATTGAAGGGATGTTAATGGCATTAGATATCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAAggaaggtgcgaataagcgg                                                                                                                          <  1:1413905‑M1/140‑20 (MQ=255)
                       tgctgcTCTGATGGTTATATCGGGAAAAGGTTACAGAAGGCTGAGGGCTTAATTGAAGGGATGTTAATGGCATTAGATATCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAAggaaggtgcgaataagcggggaaa                                                                                                                     >  1:2349876‑M1/1‑116 (MQ=255)
                       tgctgcTCTGATGGTTATATCGGGAAAAGGTTACAGAAGGCTGAGGGCATAATTGAAGGGATGTTAATGGCATTAGATATCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAAggaaggtgcgaataagcggggaaa                                                                                                                     <  1:579098‑M1/140‑25 (MQ=255)
                         ctgctCTGATGGTTATATCGGGAAAAGGTTACAGAAGGCTGAGGGCATAATTGAAGGGATGTTAATGGCATTAGATATCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAAggaaggtgcgaataagcggggaaatt                                                                                                                   >  2:970753‑M1/1‑114 (MQ=255)
                         ctgctCTGATGGTTATATCGGGAAAAGGTTACAGAAGGCTGAGGGCATAATTGAAGGGATGTTAATGGCATTAGATATCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAAggaaggtgcgaataagcggggaaatt                                                                                                                   >  1:2478015‑M1/1‑114 (MQ=255)
                         ctgctCTGATGGTTATATCGGGAAAAGGTTACAGAAGGCTGAGGGCATAATTGAAGGGATGTTAATGGCATTAGATATCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAAggaaggtgcgaataagcggggaaatt                                                                                                                   >  2:1924010‑M1/1‑114 (MQ=255)
                            ctctGATGGTTATATCGGGAAAAGGTTACAGAAGGCTGAGGGCATAATTGAAGGGATGTTAATGGCATTAGATATCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAAggaaggtgcgaataagcggggaaattctt                                                                                                                <  2:827186‑M1/140‑30 (MQ=255)
                            ctctGATGGTTATATCGGGAAAAGGTTACAGAAGGCTGAGGGCATAATTGAAGGGATGTTAATGGCATTAGATATCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAAggaaggtgcgaataagcggggaaattctt                                                                                                                <  2:750284‑M1/140‑30 (MQ=255)
                              ctGATGGTTATATCGGGAAAAGGTTACAGAAGGCTGAGGGCATAATTGAAGGGATGTTAATGGCATTAGATATCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAAggaaggtgcgaataagcggggaaattcttct                                                                                                              >  1:1771253‑M1/1‑109 (MQ=255)
                                 aTGGTTATATCGGGAAAAGGTTACAGAAGGCTGAGGGCATAATTGAAGGGATGTTAATGGCATTAGATATCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAAggaaggtgcgaataagcggggaaattcttctcgg                                                                                                           >  2:1409771‑M1/1‑106 (MQ=255)
                                     ttATATCGGGAAAAGGTTACAGAAGGCTGAGGGCATAATTGAAGGGATGTTAATGGCATTAGATATCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAAggaaggtgcgaataagcggggaaattcttctcggctga                                                                                                       <  2:1577965‑M1/140‑39 (MQ=255)
                                      tataTCGGGAAAAGGTTACAGAAGGCTGAGGGCATAATTGAAGGGATGTTAATGGCATTAGATATCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAAggaaggtgcgaataagcggggaaattcttctcggctgac                                                                                                      >  2:1423026‑M1/1‑101 (MQ=255)
                                      tataTCGGGAAAAGGTTACAGAAGGCTGAGGGCATAATTGAAGGGATGTTAATGGCATTAGATATCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAAggaaggtgcgaataagcggggaaa                                                                                                                     <  2:669149‑M1/125‑25 (MQ=255)
                                           cGGGAAAAGGTTACAGAAGGCTGAGGGCATAATTGAAGGGATGTTAATGGCATTAGATATCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagt                                                                                                 <  1:2308847‑M1/140‑45 (MQ=255)
                                           cGGGAAAAGGTTACAGAAGGCTGAGGGCATAATTGAAGGGATGTTAATGGCATTAGATATCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagt                                                                                                 <  2:876114‑M1/140‑45 (MQ=255)
                                             ggAAAAGGTTACAGAAGGCTGAGGGCATAATTGAAGGGATGTTAATGGCATTAGATATCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtca                                                                                               >  2:2338885‑M1/1‑94 (MQ=255)
                                              gAAAAGGTTACAGAAGGCTGAGGGCATAATTGAAGGGATGTTAATGGCATTAGATATCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcat                                                                                              <  1:335928‑M1/140‑48 (MQ=255)
                                                        cAGAAGGCTGAGGGCATAATTGAAGGGATGTTAATGGCATTAGATATCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttctt                                                                                    <  2:1699472‑M1/140‑58 (MQ=255)
                                                        cAGAAGGCTGAGGGCATAATTGAAGGGATGTTAATGGCATTAGATATCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttctt                                                                                    >  2:1659390‑M1/1‑83 (MQ=255)
                                                        cAGAAGGCTGAGGGCATAATTGAAGGGATGTTAATGGCATTAGATATCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttctt                                                                                    <  2:1771253‑M1/140‑58 (MQ=255)
                                                             ggCTGAGGGCATAATTGAAGGGATGTTAATGGCATTAGATATCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcat                                                                                              <  2:34382‑M1/125‑48 (MQ=255)
                                                              gCTGAGGGCATAATTGAAGGGATGTTAATGGGATTAGATATCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtt                                                                              >  1:72596‑M1/1‑77 (MQ=255)
                                                              gCTGAGGGCATAATTGAAGGGATGTTAATGGCATTAGATATCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtt                                                                              >  2:122882‑M1/1‑77 (MQ=255)
                                                              gCTGAGGGCATAATTGAAGGGATGTTAATGGCATTAGATATCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtt                                                                              >  2:240783‑M1/1‑77 (MQ=255)
                                                              gCTGAGGGCATAATTGAAGGGATGTTAATGGCATTAGATATCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcat                                                                                         <  1:6603‑M1/129‑53 (MQ=255)
                                                               cTGAGGGCATAATTGAAGGGATGTTAATGGCATTAGATATCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgttt                                                                             >  2:1522713‑M1/1‑76 (MQ=255)
                                                                         aaTTGAAGGGATGTTAATGGCATTAGATATCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgag                                                                          <  1:1924806‑M1/133‑68 (MQ=255)
                                                                          aTTGAAGGGATGTTAATGGCATTAGATATCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgatttt                                                                  >  1:2567771‑M1/1‑65 (MQ=255)
                                                                          aTTGAAGGGATGTTAATGGCATTAGATATCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgatttt                                                                  >  1:1910650‑M1/1‑65 (MQ=255)
                                                                            tGAAGGGATGTTAATGGCATTAGATATCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgatttttt                                                                <  1:970753‑M1/140‑78 (MQ=255)
                                                                             gAAGGGATGTTAATGGCATTAGATATCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttc                                                               <  1:1764723‑M1/140‑79 (MQ=255)
                                                                              aaGGGATGTTAATGGCATTAGATATCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttct                                                              >  1:152595‑M1/1‑61 (MQ=255)
                                                                              aaGGGATGTTAATGGCATTAGATATCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgatttttt                                                                >  1:1993560‑M1/1‑61 (MQ=255)
                                                                              aaGGGATGTTAATGGCATTAGATATCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgatttttt                                                                <  2:1993560‑M1/138‑78 (MQ=255)
                                                                                   aTGTTAATGGCATTAGATATCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgt                                                         >  2:1963589‑M1/1‑56 (MQ=255)
                                                                                    tGTTAATGGCATTAGATATCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgta                                                        >  2:694606‑M1/1‑55 (MQ=255)
                                                                                     gTTAATGGCATTAGATATCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaa                                                       >  2:1505943‑M1/1‑54 (MQ=255)
                                                                                     gTTAATGGCATTAGATATCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaa                                                       <  2:2514991‑M1/140‑87 (MQ=255)
                                                                                     gTTAATGGCATTAGATATCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAAggaaggtgcgaataagcggggaaattcttctcggctaactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaa                                                       >  1:344960‑M1/1‑54 (MQ=255)
                                                                                      ttAATGGCATTAGATATCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaa                                                      <  2:2357031‑M1/140‑88 (MQ=255)
                                                                                      ttAATGGCATTAGATATCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaa                                                      >  1:1098913‑M1/1‑53 (MQ=255)
                                                                                      ttAATGGCATTAGATATCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaa                                                      <  1:1452535‑M1/140‑88 (MQ=255)
                                                                                          tGGGATTAGATATCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgcc                                                  <  2:72596‑M1/140‑92 (MQ=255)
                                                                                               ttAGATATCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaa                                             >  2:2117464‑M1/1‑44 (MQ=255)
                                                                                               ttAGATATCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaa                                             <  1:1963589‑M1/140‑97 (MQ=255)
                                                                                               ttAGATATCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaa                                             <  2:1724070‑M1/140‑97 (MQ=255)
                                                                                               ttAGATATCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaa                                             >  2:2557989‑M1/1‑44 (MQ=255)
                                                                                               ttAGATATCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaa                                             <  2:264778‑M1/140‑97 (MQ=255)
                                                                                               ttAGATATCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaa                                             <  1:688329‑M1/140‑97 (MQ=255)
                                                                                               ttAGATATCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttc                                                               >  1:678551‑M1/1‑44 (MQ=255)
                                                                                                 aGATATCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatc                                           <  2:521781‑M1/140‑99 (MQ=255)
                                                                                                   atatCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcag                                         <  1:1699634‑M1/140‑101 (MQ=255)
                                                                                                   atatCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcag                                         <  2:1450781‑M1/140‑101 (MQ=255)
                                                                                                   atatCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcag                                         <  1:240783‑M1/140‑101 (MQ=255)
                                                                                                    tatCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagc                                        <  1:1505943‑M1/140‑102 (MQ=255)
                                                                                                      tCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAAggaaggtgcgaataaccggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgcct                                                 <  2:2446721‑M1/129‑93 (MQ=255)
                                                                                                      tCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAAggaaggtgcgaataaccggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgcct                                                 >  1:2446721‑M1/1‑37 (MQ=255)
                                                                                                       ccGGTTAGAGATGGATATCGTTGTTAATAACTCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagccta                                     >  1:1112257‑M1/1‑36 (MQ=255)
                                                                                                       ccGGTTAGAGATGGATATCGTTGTTAATAACTCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagccat                                     >  2:2123774‑M1/1‑36 (MQ=255)
                                                                                                       ccGGTTAGAGATGGATATCGTTGTTAATAACTCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagc                                        >  1:2155244‑M1/1‑36 (MQ=255)
                                                                                                       ccGGTTAGAGATGGATATCGTTGTTAATAACTCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcag                                         <  2:571580‑M1/136‑101 (MQ=255)
                                                                                                       ccGGTTAGAGATGGATATCGTTGTTAATAACTCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgcc                                                  <  2:1861216‑M1/127‑92 (MQ=255)
                                                                                                       ccGGTTAGAGATGGATATCGTTGTTAATAACTCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgcc                                                  >  1:1861216‑M1/1‑36 (MQ=255)
                                                                                                          gTTAGAGATGGATATCGTTGTTAATAACTCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctattt                                  >  2:423345‑M1/1‑33 (MQ=255)
                                                                                                            tAGAGATGGATATCGTTGTTAATAACTCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttag                                >  2:950215‑M1/1‑31 (MQ=255)
                                                                                                             agagATGGATATCGTTGTTAATAACTCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttaga                               >  2:1327593‑M1/1‑30 (MQ=255)
                                                                                                             agagATGGATATCGTTGTTAATAACTCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttaga                               >  2:1101763‑M1/1‑30 (MQ=255)
                                                                                                             agagATGGATATCGTTGTTAATAACTCTAATTAATATGCCAATTGTTTACTAAAAATTATTAAAAATGGGGCGTTGAGACGCCCCCAAAAATAAAGGGTAATATATAACAGAAGGTTTATATAGTTAGAAGCAAGGTtgt                               >  1:1449554/1‑140 (MQ=255)
                                                                                                                    gATATCGTTGTTAATAACTCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcag                                         >  1:479860‑M1/1‑23 (MQ=255)
                                                                                                                    gATATCGTTGTTAATAACTCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcag                                         <  2:479860‑M1/123‑101 (MQ=255)
                                                                                                                        tCGTTGTTAATAACTCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcg                    <  2:1677130‑M1/140‑122 (MQ=255)
                                                                                                                         cGTTGTTAATAACTCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgc                   <  2:1692157‑M1/140‑123 (MQ=255)
                                                                                                                         cGTTGTTAATAACTCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgc                   >  1:1679423‑M1/1‑18 (MQ=255)
                                                                                                                         cGTTGTTAATAACTCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgc                   <  1:568565‑M1/140‑123 (MQ=255)
                                                                                                                         cGTTGTTAATAACTCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgc                   >  1:506422‑M1/1‑18 (MQ=255)
                                                                                                                           ttgttAATAACTCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgcca                 >  2:1808027‑M1/1‑16 (MQ=255)
                                                                                                                              ttAATAACTCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccattt              >  1:1365386‑M1/1‑13 (MQ=255)
                                                                                                                              ttAATAACTCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttct                       <  1:420896‑M1/131‑119 (MQ=255)
                                                                                                                               taataaCTCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccattta             >  2:379938‑M1/1‑12 (MQ=255)
                                                                                                                                aataaCTCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaa            >  2:2291765‑M1/1‑11 (MQ=255)
                                                                                                                                    aCTCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcg        <  2:809564‑M1/140‑134 (MQ=255)
                                                                                                                                     ctctAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgt       >  2:65114‑M1/1‑6 (MQ=255)
                                                                                                                                        tAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttat    >  1:206584‑M1/1‑3 (MQ=255)
                                                                                                                                        tAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttat    >  1:2127912‑M1/1‑3 (MQ=255)
                                                                                                                                         aaggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatc   >  1:228339‑M1/1‑2 (MQ=255)
                                                                                                                                          aggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatcc  >  2:682603‑M1/1‑1 (MQ=255)
                                                                                                                                          aggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatcc  <  2:2460851‑M1/140‑140 (MQ=255)
                                                                                                                                          aggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatcc  <  1:950215‑M1/140‑140 (MQ=255)
                                                                                                                                          aggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatcc  <  1:1030076‑M1/140‑140 (MQ=255)
                                                                                                                                          aggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattctttctcccgtaaatgccttgaatcagcctatttagaccgtttcttctc                   <  1:252471‑M1/123‑123 (MQ=255)
                                                                                                                                          |                                                                                                                                           
TCATGTCACTGGCAGGTAAGCATTGCTGCTCTGATGGTTATATCGGGAAAAGGTTACAGAAGGCTGAGGGCATAATTGAAGGGATGTTAATGGCATTAGATATCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAATTAATATGCCAATTGTTTACTAAAAATTATTAAAAATGGGGCGTTGAGACGCCCCCAAAAATAAAGGGTAATATATAACAGAAGGTTTATATAGTTAGAAGCAAGGTTGTGCTTCTAAAGGAAGTGGCTTGAGGGAGCC  >  NC_000913/574197‑574474

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.