New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3426498 =NA (NA)3 (0.020) 3/264 10.2 2.0% noncoding (286/2904 nt) rrlD 23S ribosomal RNA
?NC_000913 4037801 = 156 (1.020)noncoding (283/2905 nt) rrlA 23S ribosomal RNA
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 164 total aligned reads displayed.

GGCGAACCGGGGGAACTGAAACATCTAAGTA‑CCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGACCATCCTCCA  >  NC_000913/4037695‑4037940
                                                                                                             |                                                                                                                                           
 gCGAACCGGGGGAACTGAAACATCTAAGTA‑CCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTg                                                                                                           <  1:2456899/140‑1 (MQ=31)
 gCGAACCGGGGGAACTGAAACATCTAAGTA‑CCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTg                                                                                                           <  1:1109337/140‑1 (MQ=31)
  cGAACCGGGGGAACTGAAACATCTAAGTA‑CCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCAGTGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGt                                                                                                            >  1:1144677/1‑140 (MQ=2)
  cGAACCGGGGGAACTGAAACATCTAAGTA‑CCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGc                                                                                                          >  1:926036/1‑140 (MQ=32)
  cGAACCGGGGGAACTGAAACATCTAAGTA‑CCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGc                                                                                                          >  1:1807520/1‑140 (MQ=32)
  cGAACCGGGGGAACTGAAACATCTAAGTA‑CCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGc                                                                                                          >  1:1552679/1‑140 (MQ=32)
  cGAACCGGGGGAACTGAAACATCTAAGTA‑CCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGc                                                                                                          >  2:2520131/1‑140 (MQ=32)
   gAACCGGGGGAACTGAAACATCTAAGTA‑CCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCg                                                                                                         >  2:33298/1‑140 (MQ=32)
    aaCCGGGGGAACTGAAACATCTAAGTA‑CCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGa                                                                                                        <  2:1131370/140‑1 (MQ=33)
      ccGGGGGAACTGAAACATCTAAGTA‑CCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATa                                                                                                      >  1:995617/1‑140 (MQ=32)
      ccGGGGGAACTGAAACATCTAAGTA‑CCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATa                                                                                                      <  2:40803/140‑1 (MQ=33)
        gggggAACTGAAACATCTAAGTA‑CCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACa                                                                                                    <  2:457221/140‑1 (MQ=33)
         ggggAACTGAAACATCTAAGTA‑CCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAg                                                                                                   <  1:1394086/140‑1 (MQ=33)
         ggggAACTGAAACATCTAAGTA‑CCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAg                                                                                                   <  2:139995/140‑1 (MQ=33)
           ggAACTGAAACATCTAAGTA‑CCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAggg                                                                                                 >  1:210782/1‑140 (MQ=32)
              aCTGAAACATCTAAGTA‑CCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTg                                                                                                           >  2:573273/1‑127 (MQ=31)
              aCTGAAACATCTAAGTA‑CCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGa                                                                                              <  2:1140663/140‑1 (MQ=33)
              aCTGAAACATCTAAGTA‑CCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGa                                                                                              >  2:1169292/1‑140 (MQ=32)
               cTGAAACATCTAAGTA‑CCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGAc                                                                                             >  1:872379/1‑140 (MQ=32)
                tGAAACATCTAAGTA‑CCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACa                                                                                            <  1:1132495/140‑1 (MQ=33)
                   aaCATCTAAGTA‑CCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGcc                                                                                         <  2:1807520/140‑1 (MQ=33)
                    aCATCTAAGTACCCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGcc                                                                                         <  2:8122/140‑1 (MQ=18)
                       tCTAAGTA‑CCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGt                                                                                     >  2:218985/1‑140 (MQ=32)
                          aaGTA‑CCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTaca                                                                                  <  1:638438/140‑1 (MQ=33)
                            gTA‑CCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTAcaca                                                                                >  2:1922884/1‑140 (MQ=32)
                            gTA‑CCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTAcaca                                                                                >  2:2241157/1‑140 (MQ=32)
                              a‑CCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACaaa                                                                              <  1:989013/140‑1 (MQ=33)
                              a‑CCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACaaa                                                                              <  1:2348813/140‑1 (MQ=33)
                                 cccGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACaaaaa                                                                            >  1:1680419/1‑140 (MQ=32)
                                 cccGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACaaaaa                                                                            <  1:2171882/140‑1 (MQ=33)
                                   cGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATg                                                                          <  2:926036/140‑1 (MQ=33)
                                   cGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATg                                                                          >  1:2526517/1‑140 (MQ=32)
                                   cGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATg                                                                          >  1:831991/1‑140 (MQ=32)
                                   cGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATg                                                                          >  2:1460975/1‑140 (MQ=32)
                                   cGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATg                                                                          >  2:1850154/1‑140 (MQ=32)
                                   cGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATg                                                                          <  2:1870552/140‑1 (MQ=33)
                                     aGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGca                                                                        >  2:2402915/1‑140 (MQ=32)
                                     aGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGca                                                                        >  1:2136943/1‑140 (MQ=32)
                                       gAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGcaca                                                                      <  1:33298/140‑1 (MQ=33)
                                       gAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGcaca                                                                      <  1:760539/140‑1 (MQ=33)
                                          aaGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGc                                                                   >  1:1997533/1‑140 (MQ=32)
                                           aGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCt                                                                  >  2:760791/1‑140 (MQ=32)
                                               aTCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGTGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGa                                                              >  1:507334/1‑140 (MQ=17)
                                               aTCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGa                                                              >  2:1228970/1‑140 (MQ=32)
                                               aTCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGa                                                              >  1:1090156/1‑140 (MQ=32)
                                               aTCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGa                                                              <  1:2402915/140‑1 (MQ=33)
                                                tCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAg                                                             <  1:1220090/140‑1 (MQ=32)
                                                tCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAg                                                             <  2:1269099/140‑1 (MQ=32)
                                                    ccGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGTGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCg                                                         <  2:507334/140‑1 (MQ=17)
                                                    ccGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCg                                                         <  1:760791/140‑1 (MQ=32)
                                                    ccGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCg                                                         <  1:1443530/140‑1 (MQ=32)
                                                    ccGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCg                                                         <  1:2387696/140‑1 (MQ=32)
                                                    ccGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCg                                                         <  1:1066447/140‑1 (MQ=32)
                                                         aTTCCCCCAGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAg                                                    <  1:667671/140‑1 (MQ=32)
                                                          ttCCCCCAGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGt                                                   <  2:568273/140‑1 (MQ=32)
                                                           tCCCCCAGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTa                                                  <  1:1460975/140‑1 (MQ=32)
                                                            cccccAGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAg                                                 <  1:2241157/140‑1 (MQ=32)
                                                              cccAGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAggg                                               >  1:1667951/1‑140 (MQ=32)
                                                                  gTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCggg                                           <  2:1552679/140‑1 (MQ=32)
                                                                  gTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCggg                                           >  1:1641679/1‑140 (MQ=32)
                                                                   tAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGa                                          <  1:1455797/140‑1 (MQ=32)
                                                                    aGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGac                                         <  2:1342509/140‑1 (MQ=32)
                                                                    aGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGac                                         <  1:1037868/140‑1 (MQ=32)
                                                                      cggcgAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGacac                                       >  1:307027/1‑140 (MQ=32)
                                                                        gcgagcgaACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGt                                     >  2:539640/1‑140 (MQ=32)
                                                                        gcgagcgaACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGt                                     >  1:541746/1‑140 (MQ=32)
                                                                        gcgagcgaACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGt                                     <  2:1641679/140‑1 (MQ=32)
                                                                        gcgagcgaACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAACCCCGTACACAAAAATGCGCATGCTGTGAGCTCGATGAGTAGGGCGGGACACGt                                     >  2:1587473/1‑140 (MQ=17)
                                                                        gcgagcgaACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGCGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGt                                     <  1:1258274/140‑1 (MQ=17)
                                                                         cgagcgaACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTg                                    >  2:327040/1‑140 (MQ=32)
                                                                         cgagcgaACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTg                                    >  2:2071233/1‑140 (MQ=32)
                                                                             cgaACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTAt                                <  2:860901/140‑1 (MQ=32)
                                                                              gaACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATc                               <  1:35618/140‑1 (MQ=32)
                                                                              gaACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATc                               <  2:2289474/140‑1 (MQ=32)
                                                                              gaACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATc                               <  1:1864590/140‑1 (MQ=32)
                                                                                  ggggAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGt                           <  2:1090156/140‑1 (MQ=32)
                                                                                  ggggAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGt                           <  2:2148954/140‑1 (MQ=32)
                                                                                  ggggAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGt                           <  2:175399/140‑1 (MQ=32)
                                                                                  ggggAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGt                           <  2:319064/140‑1 (MQ=32)
                                                                                   gggAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTc                          <  1:1850154/140‑1 (MQ=32)
                                                                                        cagcCCAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAat                     <  2:218130/140‑1 (MQ=32)
                                                                                          gcCCAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAatat                   >  1:1067243/1‑140 (MQ=32)
                                                                                            ccAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATc                               <  1:1461256/126‑1 (MQ=32)
                                                                                            ccAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATgg                 <  1:2432701/140‑1 (MQ=32)
                                                                                            ccAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATgg                 <  2:1067243/140‑1 (MQ=32)
                                                                                              agagCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATgggg               <  1:1027118/140‑1 (MQ=32)
                                                                                               gagCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATggggg              <  2:307027/140‑1 (MQ=32)
                                                                                               gagCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATggggg              >  1:1536370/1‑140 (MQ=32)
                                                                                                 gCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGa            <  1:1595211/140‑1 (MQ=32)
                                                                                                     gAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTGTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGACCAt        >  2:1436829/1‑140 (MQ=17)
                                                                                                     gAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGACCa         <  1:599221/139‑1 (MQ=32)
                                                                                                     gAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGACCAt        <  2:2136943/140‑1 (MQ=32)
                                                                                                      agtgtgtgtgtgtgtgtTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGACCa         <  2:1947239/133‑1 (MQ=12)
                                                                                                      aaTCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGACCAtc       >  1:2179496/1‑140 (MQ=32)
                                                                                                         cA‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGACCAtcctc    <  2:2179496/140‑1 (MQ=32)
                                                                                                          a‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGACCAtcctcc   >  1:489944/1‑140 (MQ=32)
                                                                                                             gtgtgtgtgtTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGACCATCCTCCa  <  2:1253825/140‑1 (MQ=32)
                                                                                                             gtgtgtgtgtTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGACCATCCTCCa  <  1:327040/140‑1 (MQ=32)
                                                                                                             gtgtgtgtgtTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGACCATCCTCCa  <  2:1527189/140‑1 (MQ=32)
                                                                                                             gtgtgtgtgtTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGACCATCCTCCa  <  1:2504705/140‑1 (MQ=32)
                                                                                                             |                                                                                                                                           
GGCGAACCGGGGGAACTGAAACATCTAAGTA‑CCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGACCATCCTCCA  >  NC_000913/4037695‑4037940

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.