Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,178,530 G→T A12D (GCC→GAC)  fbaB ← fructose‑bisphosphate aldolase class I

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,178,5300GT99.5% 675.8 / ‑5.9 187A12D (GCC→GAC) fbaBfructose‑bisphosphate aldolase class I
Reads supporting (aligned to +/- strand):  ref base G (1/0);  new base T (93/93);  total (94/93)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 200 total aligned reads displayed.

GTACAACGTCTGCATATTACGTAACACCGCTGGCGGGCGATTATTGTCAATCATTACGCGGTCTACGTAGTCATGTCCGGGGAGATAAAGCTGGTCAGAAGGAATTGTCATACAACGGTGCTGTAAAAGGTTGTCGGCGTCTTTGCCAAGCAACTGCGCAATATCTGTCATTACTATGCTCCCGTAAATTCCGATTGGATATCGGCTATGGATTGTCCTGGCCCGCCTTTTGCGGGCAATCATAATCCTGGTCGTTACGGGCGAGTTTTTCCA  >  NC_000913/2178394‑2178666
                                                                                                                                        |                                                                                                                                        
gtACAACGTCTGCATATTACGTAACACCGCTGGCGGGCGATTATTGTCAATCATTACGCGGTCTACGTAGTCATGTCCGGGGAGATAAAGCTGGTCAGAAGGAATTGTCATACAACGGTGCTGTAAAAGGTTGTcgtcgt                                                                                                                                       <  1:2160710/140‑1 (MQ=255)
gtACAACGTCTGCATATTACGTAACACCGCTGGCGGGCGATTATTGTCAATCATTACGCGGTCTACGTAGTCATGTCCGGGGAGATAAAGCTGGTCAGAAGGAATTGTCATACAACGGTGCTGTAAAAGGTTGTcgtcgt                                                                                                                                       >  2:2346532/1‑140 (MQ=255)
 tACAACGTCTGCATATTACGTAACACCGCTGGCGGGCGATTATTGTCAATCATTACGCGGTCTACGTAGTCATGTCCGGGGAGATAAAGCTGGTCAGAAGGAATTGTCATACAACGGTGCTGTAAAAGGTTgtcgtcgtc                                                                                                                                      <  2:769524/140‑1 (MQ=255)
   cAACGTCTGCATATTCCGTAACACCGCTGGCGGGCGATTATTGTCAATCATTACGCGGTCTACGTAGTCATGTCCGGGGAGATAAAGCTGGTCAGAAGGAATTGTCATACAACGGTGCTGTAAAAGGTTGTCGTCGTCtt                                                                                                                                    <  1:1117284/140‑1 (MQ=255)
      cGTCTGCATATTACGTAACACCGCTGGCGGGCGATTATTGTCAATCATTACGCGGTCTACGTAGTCATGTCCGGGGAGATAAAGCTGGTCAGAAGGAATTGTCATACAACGGTGCTGTAAAAGGTTGTCGTCGTCTTTGc                                                                                                                                 >  2:978905/1‑140 (MQ=255)
      cGTCTGCATATTACGTAACACCGCTGGCGGGCGATTATTGTCAATCATTACGCGGTCTACGTAGTCATGTCCGGGGAGATAAAGCTGGTCAGAAGGAATTGTCATACAACGGTGCTGTAAAAGGTTGTCGTCGTCTTTGc                                                                                                                                 >  1:838984/1‑140 (MQ=255)
      cGTCTGCATATTACGTAACACCGCTGGCGGGCGATTATTGTCAATCATTACGCGGTCTACGTAGTCATGTCCGGGGAGATAAAGCTGGTCAGAAGGAATTGTCATACAACGGTGCTGTAAAAGGTTGTCGTCGTCTTTGc                                                                                                                                 >  2:2562084/1‑140 (MQ=255)
      cGTCTGCATATTACGTAACACCGCTGGCGGGCGATTATTGTCAATCATTACGCGGTCTACGTAGTCATGTCCGGGGAGATAAAGCTGGTCAGAAGGAATTGTCATACAACGGTGCTGTAAAAGGTTGTCGTCGTCTTTGc                                                                                                                                 >  2:262693/1‑140 (MQ=255)
      cGTCTGCATATTACGTAACACCGCTGGCGGGCGATTATTGTCAATCATTACGCGGTCTACGTAGTCATGTCCGGGGAGATAAAGCTGGTCAGAAGGAATTGTCATACAACGGTGCTGTAAAAGGTTGTCGTCGTCTTTGc                                                                                                                                 >  2:424830/1‑140 (MQ=255)
      cGTCTGCATATTACGTAACACCGCTGGCGGGCGATTATTGTCAATCATTACGCGGTCTACGTAGTCATGTCCGGGGAGATAAAGCTGGTCAGAAGGAATTGTCATACAACGGTGCTGTAAAAGGTTGTCGTCGTCTTTGc                                                                                                                                 >  1:1366065/1‑140 (MQ=255)
      cGTCTGCATATTACGTAACACCGCTGCCGGGCGATTATTGTCAATCATTACGCGGTCTACGTAGTCATGTCCGGGGAGATAAAGCTGGTCAGAAGGAATTGTCATACAACGGTGCTGTAAAAGGTTGTCGTCGTCTTTGc                                                                                                                                 >  2:830878/1‑140 (MQ=255)
        tCTGCATATTACGTAACACCGCTGGCGGGCGATTATTGTCAATCATTACGCGGTCTACGTAGTCATGTCCGGGGAGATAAAGCTGGTCAGAAGGAATTGTCATACAACGGTGCTGTAAAAGGTTGTCGTCGTCTTTGCCa                                                                                                                               <  1:2241153/140‑1 (MQ=255)
        tCTGCATATTACGTAACACCGCTGGCGGGCGATTATTGTCAATCATTACGCGGTCTACGTAGTCATGTCCGGGGAGATAAAGCTGGTCAGAAGGAATTGTCATACAACGGTGCTGTAAAAGGTTGTCGTCGTCTTTGCCa                                                                                                                               >  2:2266647/1‑140 (MQ=255)
        tCTGCATATTACGTAACACCGCTGGCGGGCGATTATTGTCAATCATTACGCGGTCTACGTAGTCATGTCCGGGGAGATAAAGCTGGTCAGAAGGAATTGTCATACAACGGTGCTGTAAAAGGTTGTCGTCGTCTTTGCCa                                                                                                                               >  2:1475719/1‑140 (MQ=255)
        tCTGCATATTACGTAACACCGCTGGCGGGCGATTATTGTCAATCATTACGCGGTCTACGTAGTCATGTCCGGGGAGATAAAGCTGGTCAGAAGGAATTGTCATACAACGGTGCTGTAAAAGGTTGTCGTCGTCTTTGCCa                                                                                                                               >  1:511613/1‑140 (MQ=255)
        tCTGCATATTACGTAACACCGCTGGCGGGCGATTATTGTCAATCATTACGCGGTCTACGTAGTCATGTCCGGGGAGATAAAGCTGGTCAGAAGGAATTGTCATACAACGGTGCTGTAAAAGGTTGTCGTCGTCTTTGCCa                                                                                                                               <  1:1475719/140‑1 (MQ=255)
          tGCATATTACGTAACACCGCTGGCGGGCGATTATTGTCAATCATTACGCGGTCTACGTAGTCATGTCCGGGGAGATAAAGCTGGTCAGAAGGAATTGTCATACAACGGTGCTGTAAAAGGTTGTCGTCGTCTTTGCCAAg                                                                                                                             <  2:968255/140‑1 (MQ=255)
          tGCATATTACGTAACACCGCTGGCGGGCGATTATTGTCAATCATTACGCGGTCTACGTAGTCATGTCCGGGGAGATAAAGCTGGTCAGAAGGAATTGTCATACAACGGTGCTGTAAAAGGTTGTCGTCGTCTTTGCCAAg                                                                                                                             >  2:1779011/1‑140 (MQ=255)
           gCATATTACGTAACACCGCTGGCGGGCGATTATTGTCAATCATTACGCGGTCTACGTAGTCATGTCCGGGGAAATAAAGCTGGTCAGAAGGAATTGTCATACAACGGTGCTGTAAAAGGTTGTCGTCGTCTTTACCAAGc                                                                                                                            >  2:1296882/1‑140 (MQ=255)
              tatTACGTAACACCGCTGGCGGGCGATTATTGTCAATCATTACGCGGTCTACGTAGTCATGTCCGGGGAGATAAAGCTGGTCAGAAGGAATTGTCATACAACGGTGCTGTAAAAGGTTGTCGTCGTCTTTGCCAAGCAAc                                                                                                                         <  2:2502223/140‑1 (MQ=255)
                ttACGTAACACCGCTGGCGGGCGATTATTGTCAATCATTACGCGGTCTACGTAGTCATGTCCGGGGAGATAAAGCTGGTCAGAAGGAATTGTCATACAACGGTGCTGTAAAAGGTTGTCGTCGTCTTTGCCAAGCAACTg                                                                                                                       <  2:2310862/140‑1 (MQ=255)
                 tACGTAACACCGCTGGCGGGCGATTATTGTCAATCATTACGCGGTCTACGTAGTCATGTCCGGGGAGATAAAGCTGGTCAGAAGGAATTGTCATACAACGGTGCTGTAAAAGGTTGTCGTCGTCTTTGCCAAGCAACTgc                                                                                                                      >  1:1605383/1‑140 (MQ=255)
                  aCGTAACACCGCTGGCGGGCGATTATTGTCAATCATTACGCGGTCTACGTAGTCATGTCCGGGGAGATAAAGCTGGTCAGAAGGAATTGTCATACAACGGTGCTGTAAAAGGTTGTCGTCGTCTTTGCCAAGCAACTgcg                                                                                                                     <  2:139299/140‑1 (MQ=255)
                    gTAACACCGCTGGCGGGCGATTATTGTCAATCATTACGCGGTCTACGTAGTCATGTCCGGGGAGATAAAGCTGGTCAGAAGGAATTGTCATACAACGGTGCTGTAAAAGGTTGTCGTCGTCTTTGCCAAGCAACTGCGCa                                                                                                                   <  1:2046091/140‑1 (MQ=255)
                      aaCACCGCTGGCGGGCGATTATTGTCAATCATTACGCGGTCTACGTAGTCATGTCCGGGGAGATAAAGCTGGTCAGAAGGAATTGTCATACAACGGTGCTGTAAAAGGTTGTCGTCGTCTTTGCCAAGCAACTGCGCAat                                                                                                                 >  2:1518602/1‑140 (MQ=255)
                      aaCACCGCTGGCGGGCGATTATTGTCAATCATTACGCGGTCTACGTAGTCATGTCCGGGGAGATAAAGCTGGTCAGAAGGAATTGTCATACAACGGTGCTGTAAAAGGTTGTCGTCGTCTTTGCCAAGCAACTGCGCAat                                                                                                                 >  1:969161/1‑140 (MQ=255)
                        cacCGCTGGCGGGCGATTATTGTCAATCATTACGCGGTCTACGTAGTCATGTCCGGGGAGATAAAGCTGGTCAGAAGGAATTGTCATACAACGGTGCTGTAAAAGGTTGTCGTCGTCTTTGCCAAGCAACTGCGCAatat                                                                                                               >  2:872755/1‑140 (MQ=255)
                        cacCGCTGGCGGGCGATTATTGTCAATCATTACGCGGTCTACGTAGTCATGTCCGGGGAGATAAAGCTGGTCAGAAGGAATTGTCATACAACGGTGCTGTAAAAGGTTGTCGTCGTCTTTGCCAAGCAACTGCGCAatat                                                                                                               <  2:243030/140‑1 (MQ=255)
                        cacCGCTGGCGGGCGATTATTGTCAATCATTACGCGGTCTACGTAGTCATGTCCGGGGAGATAAAGCTGGTCAGAAGGAATTGTCATACAACGGTGCTGTAAAAGGTTGTCGTCGTCTTTGCCAAGCAACTGCGCAatat                                                                                                               >  1:1391250/1‑140 (MQ=255)
                        cacCGCTGGCGGGCGATTATTGTCAATCATTACGCGGTCTACGTAGTCATGTCCGGGGAGATAAAGCTGGTCAGAAGGAATTGTCATACAACGGTGCTGTAAAAGGTTGTCGTCGTCTTTGCCAAGCAACTGCGCAatat                                                                                                               <  1:1465068/140‑1 (MQ=255)
                        cacCGCTGGCGGGCGATTATTGTCAATCATTACGCGGTCTACGTAGTCATGTCCGGGGAGATAAAGCTGGTCAGAAGGAATTGTCATACAACGGTGCTGTAAAAGGTTGTCGTCGTCTTTGCCAAGCAACTGCGCAata                                                                                                                >  2:187548/1‑139 (MQ=255)
                         acCGCTGGCGGGCGATTATTGTCAATCATTACGCGGTCTACGTAGTCATGTCCGGGGAGATAAAGCTGGTCAGAAGGAATTGTCATACAACGGTGCTGTAAAAGGTTGTCGTCGTCTTTGCCAAGCAACTGCGCAATATc                                                                                                              <  1:2266647/140‑1 (MQ=255)
                         acCGCTGGCGGGCGATTATTGTCAATCATTACGCGGTCTACGTAGTCATGTCCGGGGAGATAAAGCTGGTCAGAAGGAATTGTCATACAACGGTGCTGTAAAAGGTTGTCGTCGTCTTTGCCAAGCAACTGCGCAATATc                                                                                                              >  2:1255860/1‑140 (MQ=255)
                         acCGCTGGCGGGCGATTATTGTCAATCATTACGCGGTCTACGTAGTCATGTCCGGGGAGATAAAGCTGGTCAGAAGGAATTGTCATACAACGGTGCTGTAAAAGGTTGTCGTCGTCTTTGCCAAGCAACTGCGCAATATc                                                                                                              <  1:851492/140‑1 (MQ=255)
                         acCGCTGGCGGGCGATAATTGTCAATCATTACGCGGTCTACGTAGTCATGTCCGGGGAGATAAAGCTGGTCAGAAGGAATTGTCATACAACGGTGCTGTAAAAGGTTGTCGTCGTCTTTGCCAAGCAACTGCGCAATATc                                                                                                              >  2:1633721/1‑140 (MQ=255)
                          ccGCTGGCGGGCGATTATTGTCAATCATTACGCGGTCTACGTAGTCATGTCCGGGGAGATAAAGCTGGTCAGAAGGAATTGTCATACAACGGTGCTGTAAAAGGTTGTCGTCGTCTTTGCCAAGCAACTGCGCAATATCt                                                                                                             >  2:2441260/1‑140 (MQ=255)
                           cGCTGGCGGGCGATTATTGTCAATCATTACGCGGTCTACGTAGTCATGTCCGGGGAGATAAAGCTGGTCAGAAGGAATTGTCATACAACGGTGCTGTAAAAGGTTGTCGTCGTCTTTGCCAAGCAACTgcgc                                                                                                                    <  2:614631/132‑1 (MQ=255)
                           cGCTGGCGGGCGATTATTGTCAATCATTACGCGGTCTACGTAGTCATGTCCGGGGAGATAAAGCTGGTCAGAAGGAATTGTCATACAACGGTGCTGTAAAAGGTTGTCGTCGTCTTTGCCAAGCAACTGCGCa                                                                                                                   >  1:1902924/1‑133 (MQ=255)
                           cGCTGGCGGGCGATTATTGTCAATCATTACGCGGTCTACGTAGTCATGTCCGGGGAGATAAAGCTGGTCAGAAGGAATTGTCATACAACGGTGCTGTAAAAGGTTGTCGTCGTCTTTGCCAAGCAACTGCGCAATATCTg                                                                                                            >  2:1529918/1‑140 (MQ=255)
                            gCTGGCGGGCGATTATTGTCAATCATTACGCGGTCTACGTAGTCATGTCCGGGGAGATAAAGCTGGTCAGAAGGAATTGTCATACAACGGTGCTGTAAAAGGTTGTCGTCGTCTTTGCCAAGCAACTGCGCAATATCTGt                                                                                                           <  2:1236185/140‑1 (MQ=255)
                             cTGGCGGGCGATTATTGTCAATCATTACGCGGTCTACGTAGTCATGTCCGGGGAGATAAAGCTGGTCAGAAGGAATTGTCATACAACGGTGCTGTAAAAGGTTGTCGTCGTCTTTGCCAAGCAACTGCGCAatat                                                                                                               <  1:2323474/135‑1 (MQ=255)
                             cTGGCGGGCGATTATTGTCAATCATTACGCGGTCTACGTAGTCATGTCCGGGGAGATAAAGCTGGTCAGAAGGAATTGTCATACAACGGTGCTGTAAAAGGTTGTCGTCGTCTTTGCCAAGCAACTGCGCAATATCTGTc                                                                                                          >  2:1562549/1‑140 (MQ=255)
                             cTGGCGGGCGATTATTGTCAATCATTACGCGGTCTACGTAGTCATGTCCGGGGAGATAAAGCTGGTCAGAAGGAATTGTCATACAACGGTGCTGTAAAAGGTTGTCGTCGTCTTTGCCAAGCAACTGCGCAATATCTGTc                                                                                                          >  2:1028519/1‑140 (MQ=255)
                             cTGGCGGGCGATTATTGTCAATCATTACGCGGTCTACGTAGTCATGTCCGGGGAGATAAAGCTGGTCAGAAGGAATTGTCATACAACGGTGCTGTAAAAGGTTGTCGTCGTCTTTGCCAAGCAACTGCGCAATATCTGTc                                                                                                          >  1:2355781/1‑140 (MQ=255)
                             cTGGCGGGCGATTATTGTCAATCATTACGCGGTCTACGTAGTCATGTCCGGGGAGATAAAGCTGGTCAGAAGGAATTGTCATACAACGGTGCTGTAAAAGGTTGTCGTCGTCTTTGCCAAGCAACTGCGCAATATCTGTc                                                                                                          >  1:2431790/1‑140 (MQ=255)
                                   ggcgATTATTGTCAATCATTACGCGGTCTACGTAGTCATGTCCGGGGAGATAAAGCTGGTCAGAAGGAATTGTCATACAACGGTGCTGTAAAAGGTTGTCGTCGTCTTTGCCAAGCAACTGCGCAATATCTGTCATTACt                                                                                                    <  1:1028519/140‑1 (MQ=255)
                                     cgATTATTGTCAATCATTACGCGGTCTACGTAGTCATGTCCGGGGAGATAAAGCTGGTCAGAAGGAATTGTCATACAACGGTGCTGTAAAAGGTTGTCGTCGTCTTTGCCAAGCAACTGCGCAATATCTGTCATTACTAt                                                                                                  >  1:1071404/1‑140 (MQ=255)
                                      gATTATTGTCAATCATTACGCGGTCTACGTAGTCATGTCCGGGGAGATAAAGCTGGTCAGAAGGAATTGTCATACAACGGTGCTGTAAAAGGTTGTCGTCGTCTTTGCCAAGCAACTGCGCAATATCTGTCATTACTATg                                                                                                 <  1:1874610/140‑1 (MQ=255)
                                      gATTATTGTCAATCATTACGCGGTCTACGTAGTCATGTCCGGGGAGATAAAGCTGGTCAGAAGGAATTGTCATACAACGGTGCTGTAAAAGGTTGTCGTCGTCTTTGCCAAGCAACTGCGCAATATCTGTCATTACTATg                                                                                                 <  1:2495149/140‑1 (MQ=255)
                                        ttattGTCAATCATTACGCGGTCTACGTAGTCATGTCCGGGGAGATAAAGCTGGTCAGAAGGAATTGTCATACAACGGTGCTGTAAAAGGTTGTCGTCGTCTTTGCCAAGCAACTGCGCAATATCTGTCATTACTATGCt                                                                                               <  1:1633721/140‑1 (MQ=255)
                                        ttattGTCAATCATTACGCGGTCTACGTAGTCATGTCCGGGGAGATAAAGCTGGTCAGAAGGAATTGTCATACAACGGTGCTGTAAAAGGTTGTCGTCGTCTTTGCCAAGCAACTGCGCAATATCTGTCATTACTATGCt                                                                                               <  1:424830/140‑1 (MQ=255)
                                                aaTCATTACGCGGTCTACGTAGTCATGTCCGGGGAGATAAAGCTGGTCAGAAGGAATTGTCATACAACGGTGCTGTAAAAGGTTGTCGTCGTCTTTGCCAAGCAACTGCGCAATATCTGTCATTACTATGCTCCCGTaaa                                                                                       >  1:1507640/1‑140 (MQ=255)
                                                  tCATTACGCGGTCTACGTAGTCATGTCCGGGGAGATAAAGCTGGTCAGAAGGAATTGTCATACAACGGTGCTGTAAAAGGTTGTCGTCGTCTTTGCCAAGCAACTGCGCAATATCTGTCATTACTATg                                                                                                 >  1:579219/1‑128 (MQ=255)
                                                  tCATTACGCGGTCTACGTAGTCATGTCCGGGGAGATAAAGCTGGTCAGAAGGAATTGTCATACAACGGTGCTGTAAAAGGTTGTCGTCGTCTTTGCCAAGCAACTGCGCAATATCTGTCATTACTATGCTCCCGTAAAtt                                                                                     >  1:1821087/1‑140 (MQ=255)
                                                   cATTACGCGGTCTACGTAGTCATGTCCGGGGAGATAAAGCTGGTCAGAAGGAATTGTCATACAACGGTGCTGTAAAAGGTTGTCGTCGTCTTTGCCAAGCAACTGCGCAATATCTGTCATTACTATGCTCCCGTAAATTc                                                                                    <  1:2221847/140‑1 (MQ=255)
                                                      tACGCGGTCTACGTAGTCATGTCCGGGGAGATAAAGCTGGTCAGAAGGAATTGTCATACAACGGTGCTGTAAAAGGTTGTCGTCGTCTTTGCCAAGCAACTGCGCAATATCTGTCATTACTATGCTCCCGTAAATTCCGa                                                                                 >  2:716427/1‑140 (MQ=255)
                                                      tACGCGGTCTACGTAGTCATGTCCGGGGAGATAAAGCTGGTCAGAAGGAATTGTCATACAACGGTGCTGTAAAAGGTTGTCGTCGTCTTTGCCAAGCAACTGCGCAATATCTGTCATTACTATGCTCCCGTAAATTCCGa                                                                                 >  1:2569083/1‑140 (MQ=255)
                                                          cgGTCTACGTAGTCATGTCCGGGGAGATAAAGCTGGTCAGAAGGAATTGTCATACAACGGTGCTGTAAAAGGTTGTCGTCGTCTTTGCCAAGCAACTGCGCAATATCTGTCATTACTATGCTCCCGTAAATTCCGATTgg                                                                             <  2:2355781/140‑1 (MQ=255)
                                                          cgGTCTACGTAGTCATGTCCGGGGAGATAAAGCTGGTCAGAAGGAATTGTCATACAACGGTGCTGTAAAAGGTTGTCGTCGTCTTTGCCAAGCAACTGCGCAATATCTGTCATTACTATGCTCCCGTAAATTCCGATTgg                                                                             <  2:71075/140‑1 (MQ=255)
                                                             tCTACGTAGTCATGTCCGGGGAGATAAAGCTGGTCAGAAGGAATTGTCATACAACGGTGCTGTAAAAGGTTGTCGTCGTCTTTGCCAAGCAACTGCGCAATATCTGTCATTACTATGCTCCCGTAAATTCCGATTGGata                                                                          >  2:1090271/1‑140 (MQ=255)
                                                              cTACGTAGTCATGTCCGGGGAGATAAAGCTGGTCAGAAGGAATTGTCATACAACGGTGCTGTAAAAGGTTGTCGTCGTCTTTGCCAAGCAACTGCGCAATATCTGTCATTACTATGCTCCCGTAAATTCCGATTGGatat                                                                         <  1:1883572/140‑1 (MQ=255)
                                                              cTACGTAGTCATGTCCGGGGAGATAAAGCTGGTCAGAAGGAATTGTCATACAACGGTGCTGTAAAAGGTTGTCGTCGTCTTTGCCAAGCAACTGCGCAATATCTGTCATTACTATGCTCCCGTAAATTCCGATTGGatat                                                                         <  2:1895913/140‑1 (MQ=255)
                                                                   tAGTCATGTCCGGGGAGATAAAGCTGGTCAGAAGGAATTGTCATACAACGGTGCTGTAAAAGGTTGTCGTCGTCTTTGCCAAGCAACTGCGCAATATCTGTCATTACTATGCTCCCGTAAATTCCGATTGGATATCGGCt                                                                    <  1:675398/140‑1 (MQ=255)
                                                                   tAGTCATGTCCGGGGAGATAAAGCTGGTCAGAAGGAATTGTCATACAACGGTGCTGTAAAAGGTTGTCGTCGTCTTTGCCAAGCAACTGCGCAATATCTGTCATTACTATGCTCCCGTAAATTCCGATTGGATATCGGCt                                                                    <  2:1928441/140‑1 (MQ=255)
                                                                      tCATGTCCGGGGAGATAAAGCTGGTCAGAAGGAATTGTCATACAACGGTGCTGTAAAAGGTTGTCGTCGTCTTTGCCAAGCAACTGCGCAATATCTGTCATTACTATGCTCCCGTAAATTCCGATTGGATATCGGCTATg                                                                 <  1:1255860/140‑1 (MQ=255)
                                                                       cATGTCCGGGGAGATAAAGCTGGTCAGAAGGAATTGTCATACAACGGTGCTGTAAAAGGTTGTCGTCGTCTTTGCCAAGCAACTGCGCAATATCTGTCATTACTATGCTCCCGTAAATTCCGATTGGATATCGGCTATgg                                                                >  1:289898/1‑140 (MQ=255)
                                                                        aTGTCCGGGGAGATAAAGCTGGTCAGAAGGAATTGTCATACAACGGTGCTGTAAAAGGTTGTCGTCGTCTTTGCCAAGCAACTGCGCAATATCTGTCATTACTATGCTCCCGTAAATTCCGATTGGATATCGGCTATGGa                                                               <  1:872755/140‑1 (MQ=255)
                                                                        aTGTCCGGGGAGATAAAGCTGGTCAGAAGGAATTGTCATACAACGGTGCTGTAAAAGGTTGTCGTCGTCTTTGCCAAGCAACTGCGCAATATCTGTCATTACTATGCTCCCGTAAATTCCGATTGGATATCGGCTATGGa                                                               <  1:2072976/140‑1 (MQ=255)
                                                                        aTGTCCGGGGAGATAAAGCTGGTCAGAAGGAATTGTCATACAACGGTGCTGTAAAAGGTTGTCGTCGTCTTTGCCAAGCAACTGCGCAATATCTGTCATTACTATGCTCCCGTAAATTCCGATTGGATATCGGCTATGGa                                                               <  2:1647084/140‑1 (MQ=255)
                                                                        aTGTCCGGGGAGATAAAGCTGGTCAGAAGGAATTGTCATACAACGGTGCTGTAAAAGGTTGTCGTCGTCTTTGCCAAGCAACTGCGCAATATCTGTCATTACTATGCTCCCGTAAATTCCGATTGGATATCGGCTATGGa                                                               <  1:2346532/140‑1 (MQ=255)
                                                                        aTGTCCGGGGAGATAAAGCTGGTCAGAAGGAATTGTCATACAACGGTGCTGTAAAAGGTTGTCGTCGTCTTTGCCAAGCAACTGCGCAATATCTGTCATTACTATGCTCCCGTAAATTCCGATTGGATATCGGCTATGGa                                                               <  1:2526001/140‑1 (MQ=255)
                                                                         tGTCCGGGGAGATAAAGCTGGTCAGAAGGAATTGTCATACAACGGTGCTGTAAAAGGTTGTCGTCGTCTTTGCCAAGCAACTGCGCAATATCTGTCATTACTATGCTCCCGTAAATTCCGATTGGATATCGGCt                                                                    <  1:1901740/134‑1 (MQ=255)
                                                                           tCCGGGGAGATAAAGCTGGTCAGAAGGAATTGTCATACAACGGTGCTGTAAAAGGTTGTCGTCGTCTTTGCCAAGCAACTGCGCAATATCTGTCATTACTATGCTCCCGTAAATTCCGATTGGatat                                                                         >  1:1753711/1‑127 (MQ=255)
                                                                           tCCGGGGAGATAAAGCTGGTCAGAAGGAATTGTCATACAACGGTGCTGTAAAAGGTTGTCGTCGTCTTTGCCAAGCAACTGCGCAATATCTGTCATTACTATGCTCCCGTAAATTCCGATTGGATATCGGCTATGGATTg                                                            >  2:1902540/1‑140 (MQ=255)
                                                                           tCCGGGGAGATAAAGCTGGTCAGAAGGAATTGTCATACAACGGTGCTGTAAAAGGTTGTCGTCGTCTTTGCCAAGCAACTGCGCAATATCTGTCATTACTATGCTCCCGTAAATTCCGATTGGATATCGGCTATGGATTg                                                            >  2:743577/1‑140 (MQ=255)
                                                                                ggAGATAAAGCTGGTCAGAAGGAATTGTCATACAACGGTGCTGTAAAAGGTTGTCGTCGTCTTTGCCAAGCAACTGCGCAATATCTGTCATTACTATGCTCCCGTAAATTCCGATTGGatat                                                                         >  2:519300/1‑122 (MQ=255)
                                                                                ggAGATAAAGCTGGTCAGAAGGAATTGTCATACAACGGTGCTGTAAAAGGTTGTCGTCGTCTTTGCCAAGCAACTGCGCAATATCTGTCATTACTATGCTCCCGTAAATTCCGATTGGATATCGGCTATGGa                                                               >  2:566156/1‑132 (MQ=255)
                                                                                ggAGATAAAGCTGGTCAGAAGGAATTGTCATACAACGGTGCTGTAAAAGGTTGTCGTCGTCTTTGCCAAGCAACTGCGCAATATCTGTCATTACTATGCTCCCGTAAATTCCGATTGGATATCGGCTATGGATTGTCCTg                                                       >  1:2208616/1‑140 (MQ=255)
                                                                                          cTGGTCAGAAGGAATTGTCATACAACGGTGCTGTAAAAGGTTGTCGTCGTCTTTGCCAAGCAACTGCGCAATATCTGTCATTACTATGCTCCCGTAAATTCCGATTGGATATCGGCTATGGa                                                               <  1:1522772/122‑1 (MQ=255)
                                                                                             gTCAGAAGGAATTGTCATACAACGGTGCTGTAAAAGGTTGTCGTCGTCTTTGCCAAGCAACTGCGCAATATCTGCCATTACTATGCTCCCGTAAATTCCGATTGGATATCGGCTATGGATTGTCCTGGCCCGCCTTTTGc                                          >  2:1603679/1‑140 (MQ=255)
                                                                                              tCAGAAGGAATTGTCATACAACGGTGCTGTAAAAGGTTGTCGTCGTCTTTGCCAAGCAACTGCGCAATATCTGTCATTACTATGCTCCCGTAAATTCCGATTGGATATCGGCTATGGATTGTCCTGGCCCGCCTTTTGCg                                         >  1:519389/1‑140 (MQ=255)
                                                                                                 gAAGGAATTGTCATACAACGGTGCTGTAAAAGGTTGTCGTCGTCTTTGCCAAGCAACTGCGCAATATCTGTCATTACTATGCTCCCGTAAATTCCGATTGGATATCGGCTATGGATTGTCCTGGCCCGCCTTTTGCGGGc                                      <  1:1575853/140‑1 (MQ=255)
                                                                                                 gAAGGAATTGTCATACAACGGTGCTGTAAAAGGTTGTCGTCGTCTTTGCCAAGCAACTGCGCAATATCTGTCATTACTATGCTCCCGTAAATTCCGATTGGATATCGGCTATGGATTGTCCTGGCCCGCCTTTTGCGGGc                                      <  2:2483296/140‑1 (MQ=255)
                                                                                                 gAAGGAATTGTCATACAACGGTGCTGTAAAAGGTTGTCGTCGTCTTTGCCAAGCAACTGCGCAATATCTGTCATTACTATGCTCCCGTAAATTCCGATTGGATATCGGCTATGGATTGTCCTGGCCCGCCTTTTGCGGGc                                      <  1:1779011/140‑1 (MQ=255)
                                                                                                       aTTGTCATACAACGGTGCTGTAAAAGGTTGTCGTCGTCTTTGCCAAGCAACTGCGCAATATCTGTCATTACTATGCTCCCGTAAATTCCGATTGGATATCGGCTATGGATTGTCCTGGCCCGCCTTTTGCGGGCAATCAt                                >  2:2147205/1‑140 (MQ=255)
                                                                                                           tCATACAACGGTGCTGTAAAAGGTTGTCGTCGTCTTTGCCAAGCAACTGCGCAATATCTGTCATTACTATGCTCCCGTAAATTCCGATTGGATATCGGCTATGGATTGTCCTGGCCCGCCTTTTGCGGGCAATCATAATc                            <  1:533713/140‑1 (MQ=255)
                                                                                                           tCATACAACGGTGCTGTAAAAGGTTGTCGTCGTCTTTGCCAAGCAACTGCGCAATATCTGTCATTACTATGCTCCCGTAAATTCCGATTGGATATCGGCTATGGATTGTCCTGGCCCGCCTTTTGCGGGCAATCATAATc                            <  2:1366065/140‑1 (MQ=255)
                                                                                                               aCAACGGTGCTGTAAAAGGTTGTCGTCGTCTTTGCCAAGCAACTGCGCAATATCTGTCATTACTATGCTCCCGTAAATTCCGATTGGATATCGGCTATGGATTGTCCTGGCCCGCCTTTTGCGGGCAATCATAATc                            <  2:2242677/136‑1 (MQ=255)
                                                                                                                cAACGGTGCTGTAAAAGGTTGTCGTCGTCTTTGCCAAGCAACTGCGCAATATCTGTCATTACTATGCTCCCGTAAATTCCGATTGGATATCGGCTATGGATTGTCCTGGCCCGCCTTTTGCGGGCAATCATAATCCTGGt                       >  2:2035988/1‑140 (MQ=255)
                                                                                                                   cGGTGCTGTAAAAGGTTGTCGTCGTCTTTGCCAAGCAACTGCGCAATATCTGTCATTACTATGCTCCCGTAAATTCCGATTGGATATCGGCTATGGATTGTCCTGGCCCGCCTTTTGCGGGc                                      >  2:2140191/1‑122 (MQ=255)
                                                                                                                     gTGCTGTAAAAGGTTGTCGTCGTCTTTGCCAAGCAACTGCGCAATATCTGTCATTACTATGCTCCCGTAAATTCCGATTGGATATCGGCTATGGATTGTCCTGGCCCGCCTTTTGCGGGCAATCATAATCCTGGTCGTTa                  >  1:1531825/1‑140 (MQ=255)
                                                                                                                        cTGTAAAAGGTTGTCGTCGTCTTTGCCAAGCAACTGCGCAATATCTGTCATTACTATGCTCCCGTAAATTCCGATTGGATATCGGCTATGGATTGTCCTGGCCCGCCTTTTGCGGGCAATCATAATCCTGGTCGTTACgg               >  2:899603/1‑140 (MQ=255)
                                                                                                                        cTGTAAAAGGTTGTCGTCGTCTTTGCCAAGCAACTGCGCAATATCTGTCATTACTATGCTCCCGTAAATTCCGATTGGATATCGGCTATGGATTGTCCTGGCCCGCCTTTTGCGGGCAATCATAATCCTGGTCGTTACgg               <  1:986475/140‑1 (MQ=255)
                                                                                                                        cTGTAAAAGGTTGTCGTCGTCTTTGCCAAGCAACTGCGCAATATCTGTCATTACTATGCTCCCGTAAATTCCGATTGGATATCGGCTATGGATTGTCCTGGCCCGCCTTTTGCGGGCAATCATAATCCTGGTCGTTACgg               >  1:803349/1‑140 (MQ=255)
                                                                                                                          gTAAAAGGTTGTCGTCGTCTTTGCCAAGCAACTGCGCAATATCTGTCATTACTATGCTCCCGTAAATTCCGATTGGATATCGGCTATGGATTGTCCTGGCCCGCCTTTTGCGGGCAATCATAATCCTGGTCGTTACGGGc             <  2:1071404/140‑1 (MQ=255)
                                                                                                                            aaaaGGTTGTCGTCGTCTTTGCCAAGCAACTGCGCAATATCTGTCATTACTATGCTCCCGTAAATTCCGATTGGATATCGGCTATGGATTGTCCTGGCCCGCCTTTTGCGGGCAATCATAATCCTGGTCGTTACGGGCGa           <  2:838984/140‑1 (MQ=255)
                                                                                                                                ggTTGTCGTCGTCTTTGCCAAGCAACTGCGCAATATCTGTCATTACTATGCTCCCGTAAATTCCGATTGGATATCGGCTATGGATTGTCCTGGCCCGCCTTTTGCGGGCAATCATAATCCTGGTCGTTACGGGCGAGttt       >  2:1380174/1‑140 (MQ=255)
                                                                                                                                  ttGTCGTCGTCTTTGCCAAGCAACTGCGCAATATCTGTCATTACTATGCTCCCGTAAATTCCGATTGGATATCGGCTATGGATTGTCCTGGCCCGCCTTTTGCGGGCAATCATAATCCTGGTCGTTACGGGCGAGttttt     >  1:2481708/1‑140 (MQ=255)
                                                                                                                                   tGTCGTCGTCTTTGCCAAGCAACTGCGCAATATCTGTCATTACTATGCTCCCGTAAATTCCGATTGGATATCGGCTATGGATTGTCCTGGCCCGCCTTTTGCGGGCAATCATAATCCTGGTCGTTACGGGCGAGTTTTTc    >  1:2308333/1‑140 (MQ=255)
                                                                                                                                     tcgtcgTCTTTGCCAAGCAACTGCGCAATATCTGTCATTACTATGCTCCCGTAAATTCCGATTGGATATCGGCTATGGATTGTCCTGGCCCGCCTTTTGCGGGCAATCATAATCCTGGTCGTTACGGGCGAGTTTTTCCa  <  2:2208616/140‑1 (MQ=255)
                                                                                                                                        |                                                                                                                                        
GTACAACGTCTGCATATTACGTAACACCGCTGGCGGGCGATTATTGTCAATCATTACGCGGTCTACGTAGTCATGTCCGGGGAGATAAAGCTGGTCAGAAGGAATTGTCATACAACGGTGCTGTAAAAGGTTGTCGGCGTCTTTGCCAAGCAACTGCGCAATATCTGTCATTACTATGCTCCCGTAAATTCCGATTGGATATCGGCTATGGATTGTCCTGGCCCGCCTTTTGCGGGCAATCATAATCCTGGTCGTTACGGGCGAGTTTTTCCA  >  NC_000913/2178394‑2178666

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: