BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,654,221	G→A	A238V (GCG→GTG)	sseB ←	protein SseB

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,654,221	0	G	A	100.0%	429.7 / NA	124	A238V (GCG→GTG)	sseB	protein SseB
Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (62/62); total (62/62)

Only 100 of 126 total aligned reads displayed.

ATTTACTGGTGGTTAACAACCTTCAGAGCAGCAAGTAAGCCCGAATGCCGCCCTTTGGGCGGCATATTTTAGATTATCCGATTCTGTTTAAAGTCACGC‑‑AAAAAACCACCCCAGCGACGTTCATAGAATGGCGCAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCCTTTTTTCACCTGACAAATATCGATTGGTTCATCGCCAGGTAATGTATCGGTCGCTACACTTCCCGTCGCCTGAATAATTTCTTCGATATCACCATC  >  NC_000913/2654089‑2654357

aTTTACTGGTGGTTAACAACCTTCAGAGCAGCAAGTAAGCCCGAATGCCGCCCTTTGGGCGGCATATTTTAGATTATCCGATTCTGTTTAAAGTCACGC‑‑AAAAAACCACCCCAGCGACGTTCATAGAATGGCACAATATg                                                                                                                                   <  1:33689/140‑1 (MQ=255)

  ttACTGGTGGTTAACAACCTTCAGAGCAGCAAGTAAGCCCGAATGCCGCCCTTTGGGCGGCATATTTTAGATTATCCGATTCTGTTTAAAGTCACGC‑‑AAAAAACCACCCCAGCGACGTTCATAGAATGGCACAATATGtt                                                                                                                                 <  2:1792964/140‑1 (MQ=255)

  ttACTGGTGGTTAACAACCTTCAGAGCAGCAAGTAAGCCCGAATGCCGCCCTTTGGGCGGCATATTTTAGATTATCCGATTCTGTTTAAAGTCACGC‑‑AAAAAACCACCCCAGCGACGTTCATAGAATGGCACAATATGtt                                                                                                                                 <  1:642364/140‑1 (MQ=255)

  ttACTGGTGGTTAACAACCTTCAGAGCAGCAAGTAAGCCCGAATGCCGCCCTTTGGGCGGCATATTTTAGATTATCCGATTCTGTTTAAAGTCACGC‑‑AAAAAACCACCCCAGCGACGTTCATAGAATGGCACAATATGtt                                                                                                                                 <  1:2283458/140‑1 (MQ=255)

  ttACTGGTGGTTAACAACCTTCAGAGCAGCAAGTAAGCCCGAATGCCGCCCTTTGGGCGGCATATTTTAGATTATCCGATTCTGTTTAAAGTCACGC‑‑AAAAAACCACCCCAGCGACGTTCATACAATGGCACAATATGtt                                                                                                                                 <  2:2279836/140‑1 (MQ=255)

       ggtggtTAACAACCTTCAGAGCAGCAAGTAAGCCCGAATGCCGCCCTTTGGGCGGCATATTTTAGATTATCCGATTCTGTTTAAAGTCACGC‑‑AAAAAACCACCCCAGCGACGTTCATAGAATGGCACAATATGTTCGGta                                                                                                                            <  2:1646866/140‑1 (MQ=255)

       ggtggtTAACAACCTTCAGAGCAGCAAGTAAGCCCGAATGCCGCCCTTTGGGCGGCATATTTTAGATTATCCGATTCTGTTTAAAGTCACGC‑‑AAAAAACCACCCCAGCGACGTTCATAGAATGGCACAATATGTTCGGta                                                                                                                            <  1:99542/140‑1 (MQ=255)

         tggtTAACAACCTTCAGAGCAGCAAGTAAGCCCGAATGCCGCCCTTTGGGCGGCATATTTTAGATTATCCGATTCTGTTTAAAGTCACGC‑‑AAAAAACCACCCCAGCGACGTTCATAGAATGGCACAATATGTTCGGtaat                                                                                                                          >  2:1328502/1‑140 (MQ=255)

          ggtTAACAACCTTCAGAGCAGCAAGTAAGCCCGAATGCCGCCCTTTGGGCGGCATATTTTAGATTATCCGATTCTGTTTAAAGTCACGC‑‑AAAAAACCACCCCAGCGACGTTCATAGAATGGCACAATATGTTCGGtaata                                                                                                                         <  1:428311/140‑1 (MQ=255)

          ggtTAACAACCTTCAGAGCAGCAAGTAAGCCCGAATGCCGCCCTTTGGGCGGCATATTTTAGATTATCCGATTCTGTTTAAAGTCACGC‑‑AAAAAACCACCCCAGCGACGTTCATAGAATGGCACAATATGTTCGGtaata                                                                                                                         >  2:484979/1‑140 (MQ=255)

            ttAACAACCTTCAGAGCAGCTAGTAAGCCCGAATGCCGCCCTTTGGGCGGCATATTTTAGATTATCCGATTCCGTTTAAAGTCACGC‑‑AAAAAACCACCCCAGCGACGTTCATAGAATCGCACACTATGTTCGGTAATaaa                                                                                                                       <  2:649020/140‑1 (MQ=255)

            ttAACAACCTTCAGAGCAGCAAGTAAGCCCGAATGCCGCCCTTTGGGCGGCATATTTTAGATTATCCGATTCTGTTTAAAGTCACGC‑‑AAAAAACCACCCCAGCGACGTTCATAGAATGGCACAATATGTTCGGTAATaaa                                                                                                                       <  1:2532159/140‑1 (MQ=255)

             tAACAACCTTCAGAGCAGCAAGTAAGCCCGAATGCCGCCCTTTGGGCGGCATATTTTAGATTATCCGATTCTGTTTAAAGTCACGC‑‑AAAAAACCACCCCAGCGACGTTCATAGAATGGCACAATATGtt                                                                                                                                 >  2:2354902/1‑129 (MQ=255)

                caacCTTCAGAGCAGCAAGTAAGCCCGAATGCCGCCCTTTGGGCGGCATATTTTAGATTATCCGATTCTGTTTAAAGTCACGC‑‑AAAAAACCACCCCAGCGACGTTCATAGAATGGCACAATATGTTCGGTAATAAAGTgg                                                                                                                   <  2:2379195/140‑1 (MQ=255)

                    cTTCAGAGCAGCAAGTAAGCCCGAATGCCGCCCTTTGGGCGGCATATTTTAGATTATCCGATTCTGTTTAAAGTCACGC‑‑AAAAAACCACCCCAGCGACGTTCATAGAATGGCACAATATGTTCGGTAATAAAGTGGCTaa                                                                                                               <  1:1839894/140‑1 (MQ=255)

                      tCAGAGCAGCAAGTAAGCCCGAATGCCGCCCTTTGGGCGGCATATTTTAGATTATCCGATTCTGTTTAAAGTCACGC‑‑AAAAAACCACCCCAGCGACGTTCATAGAATGGCACAATATGTTCGGTAATAAAGTGGCTAAtt                                                                                                             >  1:2589243/1‑140 (MQ=255)

                        agagCAGCAAGTAAGCCCGAATGCCGCCCTTTGGGCGGCATATTTTAGATTATCCGATTCTGTTTAAAGTCACGC‑‑AAAAAACCACCCCAGCGACGTTCATAGAATGGCACAATATGTTCGGTAATAAAGTGGCTAATTcc                                                                                                           >  2:2471835/1‑140 (MQ=255)

                           gcagcaAGTAAGCCCGAATGCCGCCCTTTGGGCGGCATATTTTAGATTATCCGATTCTGTTTAAAGTCACGC‑‑AAAAAACCACCCCAGCGACGTTCATAGAATGGCACAATATGTTCGGTAATAAAGTGGCTAATTCCttt                                                                                                        >  2:55532/1‑140 (MQ=255)

                               caAGTAAGCCCGAATGCCGCCCTTTGGGCGGCATATTTTAGATTATCCGATTCTGTTTAAAGTCACGC‑‑AAAAAACCACCCCAGCGACGTTCATAGAATGGCACAATATGTTCGGTAATAAAGTg                                                                                                                    >  1:2260536/1‑124 (MQ=255)

                               caAGTAAGCCCGAATGCCGCCCTTTGGGCGGCATATTTTAGATTATCCGATTCTGTTTAAAGTCACGC‑‑AAAAAACCACCCCAGCGACGTTCATAGAATGGCACAATATGTTCGGTAATAAAGTg                                                                                                                    <  2:2260536/124‑1 (MQ=255)

                               caAGTAAGCCCGAATGCCGCCCTTTGGGCGGCATATTTTAGATTATCCGATTCTGTTTAAAGTCACGC‑‑AAAAAACCACCCCAGCGACGTTCATAGAATGGCACAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTcc                                                                                                    >  1:430086/1‑140 (MQ=255)

                                    aaGCCCGAATGCCGCCCTTTGGGCGGCATATTTTAGATTATCCGATTCTGTTTAAAGTCACGC‑‑AAAAAACCACCCCAGCGACGTTCATAGAATGGCACAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCCttt                                                                                               >  1:295664/1‑140 (MQ=255)

                                          gAATGCCGCCCTTTGGGCGGCATATTTTAGATTATCCGATTTTGTTTAAAGTCACGC‑‑AAAAAACCACCCCAGCGACGTTCATAGAATGGCACAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCCTTTTTTCAc                                                                                         <  1:554859/140‑1 (MQ=255)

                                          gAATGCCGCCCTTTGGGCGGCATATTTTAGATTATCCGATTCTGTTTAAAGTCACGC‑‑AAAAAACCACCCCAGCGACGTTCATAGAATGGCACAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCCTTTTTTCAc                                                                                         <  1:1695396/140‑1 (MQ=255)

                                          gAATGCCGCCCTTTGGGCGGCATATTTTAGATTATCCGATTCTGTTTAAAGTCACGC‑‑AAAAAACCACCCCAGCGACGTTCATAGAATGGCACAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCCTTTTTTCAc                                                                                         <  1:289026/140‑1 (MQ=255)

                                           aaTGCCGCCCTTTGGGCGGCATATTTTAGATTATCCGATTCTGTTTAAAGTCACGC‑‑AAAAAACCACCCCAGCGACGTTCATAGAATGGCACAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCCTTTTTTCAcc                                                                                        >  1:2205133/1‑140 (MQ=255)

                                           aaTGCCGCCCTTTGGGCGGCATATTTTAGATTATCCGATTCTGTTTAAAGTCACGC‑‑AAAAAACCACCCCAGCGACGTTCATAGAATGGCACAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCCTTTTTTCAc                                                                                         <  1:334371/139‑1 (MQ=255)

                                           aaTGCCGCCCTTTGGGCGGCATATTTTAGATTATCCGATTCTGTTTAAAGTCACGC‑‑AAAAAACCACCCCAGCGACGTTCATAGAATGGCACAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCCTTTTTTCAc                                                                                         >  2:334371/1‑139 (MQ=255)

                                              gccgccCTTTGGGCGGCATATTTTAGATTATCCGATTCTGTTTAAAGTCACGC‑‑AAAAAACCACCCCAGCGACGTTCATAGAATGGCACAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCCTTTTTTCACCTGa                                                                                     <  1:881099/140‑1 (MQ=255)

                                                 gccCTTTGGGCGGCATATTTTAGATTATCCGATTCTGTTTAAAGTCACGC‑‑AAAAAACCACCCCAGCGACGTTCATAGAATGGCACAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCCTTTTTTCACCTGACaa                                                                                  <  1:1328502/140‑1 (MQ=255)

                                                 gccCTTTGGGCGGCATATTTTAGATTATCCGATTCTGTTTAAAGTCACGC‑‑AAAAAACCACCCCAGCGACGTTCATAGAATGGCACAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCCTTTTTTCACCTGACaa                                                                                  <  2:2205133/140‑1 (MQ=255)

                                                    cTTTGGGCGGCATATTTTAGATTATCCGATTCTGTTTAAAGTCACGC‑‑AAAAAACCACCCCAGCGACGTTCATAGAATGGCACAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCCTTTTTTCACCTGACAAata                                                                               <  1:2471835/140‑1 (MQ=255)

                                                              cATATTTTAGATTATCCGATTCTGTTTAAAGTCACGC‑‑AAAAAACCACCCCAGCGACGTTCATAGAATGGCACAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCCTTTTTTCACCTGACAAATATCGATTGGtt                                                                     <  2:2128402/140‑1 (MQ=255)

                                                              cATATTTTAGATTATCCGATTCTGTTTAAAGTCACGC‑‑AAAAAACCACCCCAGCGACGTTCATAGAATGGCACAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCCTTTTTTCACCTGACAAATATCGATTGGtt                                                                     <  1:55532/140‑1 (MQ=255)

                                                              cATATTTTAGATTATCCGATTCTGTTTAAAGTCACGC‑‑AAAAAACCACCCCAGCGACGTTCATAGAATGGCACAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCCTTTTTTCACCTGACAAATATCGATTGGtt                                                                     <  2:430086/140‑1 (MQ=255)

                                                              cATATTTTAGATTATCCGATTCTGTTTAAAGTCACGC‑‑AAAAAACCACCCCAGCGACGTTCATAGAATGGCACAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCCTTTTTTCACCTGACAAATATCGATTGGtt                                                                     <  1:1659870/140‑1 (MQ=255)

                                                                   tttAGATTATCCGATTCTGTTTAAAGTCACGC‑‑AAAAAACCGCCCCAGCGACGTTCATAGAATGGCACAATATGTTCGGTAATAAAGTGGCTATTTCCTTTTGCCCCTTTTTTCACCTGACAAATATCGATTGGTTCAACg                                                                <  2:1629743/140‑1 (MQ=255)

                                                                   tttAGATTATCCGATTCTGTTTAAAGTCACGC‑‑AAAAAACCACCCCAGCGACGTTCATAGAATGGCACAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCCTTTTTTCACCTGACAAATATCGATTGGTTCATCg                                                                <  2:2304874/140‑1 (MQ=255)

                                                                     tAGATTATCCGATTCTGTTTAAAGTCACGC‑‑AAAAAACCACCCCAGCGACGTTCATAGAATGGCACAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCCTTTTTTCACCTGACAAATATCGATTGGTTCATCGcc                                                              <  2:2335529/140‑1 (MQ=255)

                                                                     tAGATTATCCGATTCTGTTTAAAGTCACGC‑‑AAAAAACCACCCCAGCGACGTTCATAGAATGGCACAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCCTTTTTTCACCTGACAAATATCGATTGGTTCATCGcc                                                              <  2:329123/140‑1 (MQ=255)

                                                                     tAGATTATCCGATTCTGTTTAAAGTCACGC‑‑AAAAAACCACCCCAGCGACGTTCATAGAATGGCACAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCCTTTTTTCACCTGACAAATATCGATTGGTTCATCGcc                                                              <  1:547397/140‑1 (MQ=255)

                                                                       gATTATCCGATTCTGTTTAAAGTCACGC‑‑AAAAAACCACCCCAGCGACGTTCATAGAATGGCACAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCCTTTTTTCACCTGACAAATATCGATTGGTTCATCGCCAg                                                            <  2:255941/140‑1 (MQ=255)

                                                                        aTTATCCGATTCTGTTTAAAGTCACGC‑‑AAAAAACCACCCCAGCGACGTTCATAGAATGGCACAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCCTTTTTTCACCTGACAAATATCGATTGGTTCATCGCCAgg                                                           <  2:1901609/140‑1 (MQ=255)

                                                                        aTTATCCGATTCTGTTTAAAGTCACGC‑‑AAAAAACCACCCCAGCGACGTTCATAGAATGGCACAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCCTTTTTTCACCTGACAAATATCGATTGGTTCATCGCCAgg                                                           >  1:1972171/1‑140 (MQ=255)

                                                                         ttATCCGATTCTGTTTAAAGTCACGC‑‑AAAAAACCACCCCAGCGACGTTCATAGAATGGCACAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCCTTTTTTCACCTGACAAATATCGATTGGTTCATCGCCAGGt                                                          >  2:1306912/1‑140 (MQ=255)

                                                                          tATCCGATTCTGTTTAAAGTCACGC‑‑AAAAAACCACCCCAGCGACGTTCATAGAATGGCACAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCCTTTTTTCACCTGACAAATATCGATTGGTTCATCGCCAGGTa                                                         >  2:892431/1‑140 (MQ=255)

                                                                           aTCCGATTCTGTTTAAAGTCACGC‑‑AAAAAACCACCCCAGCGACGTTCATAGAATGGCACAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCCTTTTTTCACCTGACAAATATCGATTGGTTCATCGCCAGGTaa                                                        >  1:136370/1‑140 (MQ=255)

                                                                            tCCGATTCTGTTTAAAGTCACGCAAAAAAAACCACCCCAGCGACGTTCATAGAATGGCACAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCCTTTTTTCACCTGACAAATATCGATTGGTTCa                                                                   >  2:1410735/1‑130 (MQ=255)

                                                                            tCCGATTCTGTTTAAAGTCACGC‑‑AAAAAACCACCCCAGCGACGTTCATAGAATGGCACAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCCTTTTTTCACCTGACAAATATCGATTGGTTCATCg                                                                >  2:905974/1‑131 (MQ=255)

                                                                            tCCGATTCTGTTTAAAGTCACGC‑‑AAAAAACCACCCCAGCGACGTTCATAGAATGGCACAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCCTTTTTTCACCTGACAAATATCGATTGGTTCATCGcc                                                              <  1:363490/133‑1 (MQ=255)

                                                                            tCCGATTCTGTTTAAAGTCACGC‑‑AAAAAACCACCCCAGCGACGTTCATAGAATGGCACAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCCTTTTTTCACCTGACAAATATCGATTGGTTCATCGCCAGGTAAt                                                       >  1:602705/1‑140 (MQ=255)

                                                                            tCCGATTCTGTTTAAAGTCACGC‑‑AAAAAACCACCCCAGCGACGTTCATAGAATGGCACAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCCTTTTTTCACCTGACAAATATCGATTGGTTCATCGCCAGGTAAt                                                       >  1:274732/1‑140 (MQ=255)

                                                                            tCCGATTCTGTTTAAAGTCACGC‑‑AAAAAACCACCCCAGCGACGTTCATAGAATGGCACAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCCTTTTTTCACCTGACAAATATCGATTGGTTCATCGCCAGGTAAt                                                       >  2:426914/1‑140 (MQ=255)

                                                                            tCCGATTCTGTTTAAAGTCACGC‑‑AAAAAACCACCCCAGCGACGTTCATAGAATGGCACAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCCTTTTTTCACCTGACAAATATCGATTGGTTCATCGCCAGGTAAt                                                       >  1:1698334/1‑140 (MQ=255)

                                                                            tCCGATTCTGTTTAAAGTCACGC‑‑AAAAAACCACCCCAGCGACGTTCATAGAATGGCACAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCCTTTTTTCACCTGACAAATATCGATTGGTTCATCGCCAGGTAAt                                                       >  2:1110638/1‑140 (MQ=255)

                                                                            tCCGATTCTGTTTAAAGTCACGC‑‑AAAAAACCACCCCAGCGACGTTCATAGAATGGCACAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCCTTTTTTCACCTGACAAATATCGATTGGTTCATCGCCAGGTAAt                                                       >  1:1898811/1‑140 (MQ=255)

                                                                             ccGATTCTGTTTAAAGTCACGC‑‑AAAAAACCACCCCAGCGACGTTCATAGAATGGCACAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCCTTTTTTCACCTGACAAATATCGATTGGTTCATCGcc                                                              >  1:1819519/1‑132 (MQ=255)

                                                                                aTTCTGTTTAAAGTCACGC‑‑AAAAAACCACCCCAGCGACGTTCATAGAATGGCACAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCCTTTTTTCACCTGACAAATATCGATTGGtt                                                                     <  1:1134616/122‑1 (MQ=255)

                                                                                 ttCTGTTTAAAGTCACGC‑‑AAAAAACCACCCCAGCGACGTTCATAGAATGGCACAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCCTTTTTTCACCTGACAAATATCGATTGGTTCATCGCCAGGTAATGTATc                                                  <  1:1906611/140‑1 (MQ=255)

                                                                                 ttCTGTTTAAAGTCACGC‑‑AAAAAACCACCCCAGCGACGTTCATAGAATGGCACAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCCTTTTTTCACCTGACAAATATCGATTGGTTCATCGCCAGGTAATGTATc                                                  <  1:1257214/140‑1 (MQ=255)

                                                                                      tttAAAGTCACGC‑‑AAAAAACCACCCCAGCGACGTTCATAGAATGGCACAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCCTTTTTTCACCTGACAAATATCGATTGGTTCATCGCCAGGTAATGTATCGGTCg                                             >  1:1950131/1‑140 (MQ=255)

                                                                                      tttAAAGTCACGC‑‑AAAAAACCACCCCAGCGACGTTCATAGAATGGCACAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCCTTTTTTCACCTGACAAATATCGATTGGTTCATCGCCAGGTAATGTATCGGTCg                                             >  2:447741/1‑140 (MQ=255)

                                                                                      tttAAAGTCACGC‑‑AAAAAACCACCCCAGCGACGTTCATAGAATGGCACAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCCTTTTTTCACCTGACAAATATCGATTGGTTCATCGCCAGGTAATGTATCGGTCg                                             >  1:736667/1‑140 (MQ=255)

                                                                                      tttAAAGTCACGC‑‑AAAAAACCACCCCAGCGACGTTCATAGAATGGCACAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCCTTTTTTCACCTGACAAATATCGATTGGTTCATCGCCAGGTAATGTATCGGTCg                                             >  1:472318/1‑140 (MQ=255)

                                                                                      tttAAAGCCACGC‑‑AAAAAACCACCCCAGCAACGTTCATAGAATGGCGCAATATGCTCGGTAATAAAGGGGCTAATGCCTTTGTCCCCTTGTATCACCTGACAAATATCGAATAAACCATTCCAACGTAATGTATCGGTCg                                             >  2:808394/1‑140 (MQ=255)

                                                                                        tAAAGTCACGC‑‑AAAAAACCACCCCAGCGACGTTCATAGAATGGCACAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCCTTTTTTCACCTGACAAATATCGATTGGTTCATCGCCAGGTAATGTATCGGTCGCt                                           >  1:1839501/1‑140 (MQ=255)

                                                                                                cGC‑‑AAAAAACCACCCCAGCGACGTTCATAGAATGGCACAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCCTTTTTTCACCTGACAAATATCGATTGGTTCATCGCCAGGTAATGTATCGGTCGCTaca                                        >  2:2477893/1‑135 (MQ=255)

                                                                                                cGC‑‑AAAAAACCACCCCAGCGACGTTCATAGAATGGCACAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCCTTTTTTCACCTGACAAATATCGATTGGTTCATCGCCAGGTAATGTATCGGTCGCTaca                                        <  1:2477893/135‑1 (MQ=255)

                                                                                                cGC‑‑AAAAAACCACCCCAGCGACGTTCATAGAATGGCACAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCCTTTTTTCACCTGACAAATATCGATTGGTTCATCGCCAGGTAATGTATCGGTCGCTACACTTcc                                   >  2:915032/1‑140 (MQ=255)

                                                                                                cGC‑‑AAAAAACCACCCCAGCGACGTTCATAGAATGGCACAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCCTTTTTTCACCTGACAAATATCGATTGGTTCATCGCCAGGTAATGTATCGGTCGCTACACTTcc                                   >  2:2420414/1‑140 (MQ=255)

                                                                                                cGC‑‑AAAAAACCACCCCAGCGACGTTCATAGAATGGCACAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCCTTTTTTCACCTGACAAATATCGATTGGTTCATCGCCAGGTAATGTATCGGTCGCTACACTTcc                                   >  2:2445048/1‑140 (MQ=255)

                                                                                                cGC‑‑AAAAAACCACCCCAGCGACGTTCATAGAATGGCACAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCCTTTTTTCACCTGACAAATATCGATTGGTTCATCGCCAGGTAATGTATCGGTCGCTACACTTcc                                   >  2:28550/1‑140 (MQ=255)

                                                                                                cGC‑‑AAAAAACCACCCCAGCGACGTTCATAGAATGGCACAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCCTTTTTTCACCTGACAAATATCGATTGGTTCATCGCCAGGTAATGTATCGGTCGCTACACTTcc                                   >  1:1379163/1‑140 (MQ=255)

                                                                                                cGC‑‑AAAAAACCACCCCAGCGACGTTCATAGAATGGCACAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCCTTTTTTCACCTGACAAATATCGATTGGTTCATCGCCAGGTAATGTATCGGTCGCTACACTTcc                                   >  1:1525293/1‑140 (MQ=255)

                                                                                                cGC‑‑AAAAAACCACCCCAGCGACGTTCATAGAATGGCACAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCCTTTTTTCACCTGACAAATATCGATTGGTTCATCGCCAGGTAATGTATCGGTCGCTACACTTcc                                   >  1:2002768/1‑140 (MQ=255)

                                                                                                     aaaaaaCCACCCCAGCGACGTTCATAGAATGGCACAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCCTTTTTTCACCTGACAAATATCGATTGGTTCATCGCCAGGTAATGTATCGGTCGCTACACTTCCCGt                                <  2:1839501/140‑1 (MQ=255)

                                                                                                     aaaaaaCCACCCCAGCGACGTTCATAGAATGGCACAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCCTTTTTTCACCTGACAAATATCGATTGGTTCATCGCCAGGTAATGTATCGGTCGCTACACTTCCCGt                                <  1:994348/140‑1 (MQ=255)

                                                                                                         aaCCACCCCAGCGACGTTCATAGAATGGCACAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCCTTTTTTCACCTGACAAATATCGATTGGTTCATCGCCAGGTAATGTATCGGTCGCTACACTTCCCGTCGcc                            <  2:1379163/140‑1 (MQ=255)

                                                                                                         aaCCACCCCAGCGACGTTCATAGAATGGCACAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCCTTTTTTCACCTGACAAATATCGATTGGTTCATCGCCAGGTAATGTATCGGTCGCTACACTTCCCGTCGcc                            >  1:1687170/1‑140 (MQ=255)

                                                                                                             accCCAGCGACGTTCATAGAATGGCACAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCCTTTTTTCACCTGACAAATATCGATTGGTTCATCGCCAGGTAATGTATCGGTCGCTACACTTCCCGTCGCCTGaa                        >  1:1740633/1‑140 (MQ=255)

                                                                                                             accCCAGCGACGTTCATAGAATGGCACAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCCTTTTTTCACCTGACAAATATCGATTGGTTCATCGCCAGGTAATGTATCGGTCGCTACACTTCCCGTCGCCTGaa                        >  1:678891/1‑140 (MQ=255)

                                                                                                              ccccAGCGACGTTCATAGAATGGCACAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCCTTTTTTCACCTGACAAATATCGATTGGTTCATCGCCAGGTAATGTATCGGTCGCTACACTTCCCGTCGCCTGaat                       >  2:1164906/1‑140 (MQ=255)

                                                                                                               cccAGCGACGTTCATAGAATGGCACAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCCTTTTTTCACCTGACAAATATCGATTGGTTCATCGCCAGGTAATGTATCGGTCGCTACACTTCCCGTCGCCTGaata                      >  1:540381/1‑140 (MQ=255)

                                                                                                               cccAGCGACGTTCATAGAATGGCACAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCCTTTTTTCACCTGACAAATATCGATTGGTTCATCGCCAGGTAATGTATCGGTCGCTACACTTCCCGTCGCCTGaata                      >  1:1437905/1‑140 (MQ=255)

                                                                                                               cccAGCGACGTTCATAGAATGGCACAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCCTTTTTTCACCTGACAAATATCGATTGGTTCATCGCCAGGTAATGTATCGGTCGCTACACTTCCCGTCGCCTGaata                      >  1:2424443/1‑140 (MQ=255)

                                                                                                                 cAGCGACGTTCATAGAATGGCACAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCCTTTTTTCACCTGACAAATATCGATTGGTTCATCGCCAGGTAATGTATCGGTCGCTACACTTCCCGTCGCCTGaataat                    >  2:1372913/1‑140 (MQ=255)

                                                                                                                    cGACGTTCATAGAATGGCACAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCCTTTTTTCACCTGACAAATATCGATTGGTTCATCGCCAGGTAATGTATCGGTCGCTACACTTCCCGTCGCCTGAATAATttc                 <  1:1576786/140‑1 (MQ=255)

                                                                                                                    cGACGTTCATAGAATGGCACAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCCTTTTTTCACCTGACAAATATCGATTGGTTCATCGCCAGGTAATGTATCGGTCGCTACACTTCCCGTCGCCTGAATAATttc                 <  1:1340526/140‑1 (MQ=255)

                                                                                                                     gACGTTCATAGAATGGCACAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCCTTTTTTCACCTGACAAATATCGATTGGTTCATCGCCAGGTAATGTATCGGTCGCTACACTTCCCGTCGCCTGAATAATttct                <  2:1687170/140‑1 (MQ=255)

                                                                                                                      aCGTTCATAGAATGGCACAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCCTTTTTTCACCTGACAAATATCGATTGGTTCATCGCCAGGTAATGTATCGGTCGCTACACTTCCCGTCGCCTGAATAATttctt               <  2:115667/140‑1 (MQ=255)

                                                                                                                         ttCATAGAATGGCACAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCCTTTTTTCACCTGACAAATATCGATTGGTTCATCGCCAGGTAATGTATCGGTCGCTACACTTCCCGTCGCCTGAATAATTTCTTCGa            >  2:791461/1‑140 (MQ=255)

                                                                                                                           cATAGAATGGCACAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCCTTTTTTCACCTGACAAATATCGATTGGTTCATCGCCAGGTAATGTATCGGTCGCTACACTTCCCGTCGCCTGAATAATTTCTTCGata          <  2:1898811/140‑1 (MQ=255)

                                                                                                                           cATAGAATGGCACAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCCTTTTTTCACCTGACAAATATCGATTGGTTCATCGCCAGGTAATGTATCGGTCGCTACACTTCCCGTCGCCTGAATAATTTCTTCGata          >  1:311238/1‑140 (MQ=255)

                                                                                                                            aTAGAATGGCACAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCCTTTTTTCACCTGACAAATATCGATTGGTTCATCGCCAGGTAATGTATCGGTCGCTACACTTCCCGTCGCCTGaataat                    >  1:1076938/1‑129 (MQ=255)

                                                                                                                            aTAGAATGGCACAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCCTTTTTTCACCTGACAAATATCGATTGGTTCATCGCCAGGTAATGTATCGGTCGCTACACTTCCCGTCGCCTGaataat                    <  2:1076938/129‑1 (MQ=255)

                                                                                                                                  tGGCACAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCCTTTTTTCACCTGACAAATATCGATTGGTTCATCGCCAGGTAATGTATCGGTCGCTACACTTCCCGTCGCCTGAATAATTTCTTCGATATCACCAt   >  1:421313/1‑140 (MQ=255)

                                                                                                                                  tGGCACAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCCTTTTTTCACCTGACAAATATCGATTGGTTCATCGCCAGGTAATGTATCGGTCGCTACACTTCCCGTCGCCTGAATAATTTCTTCGATATCACCAt   <  1:892431/140‑1 (MQ=255)

                                                                                                                                  tGGCACAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCCTTTTTTCACCTGACAAATATCGATTGGTTCATCGCCAGGTAATGTATCGGTCGCTACACTTCCCGTCGCCTGAATAATTTCTTCGATATCACCAt   <  2:1525293/140‑1 (MQ=255)

                                                                                                                                   ggCACAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCCTTTTTTCACCTGACAAATATCGATTGGTTCATCGCCAGGTAATGTATCGGTCGCTACACTTCCCGTCGCCTGAATAATTTCTTCGATATCa       <  1:725554/135‑1 (MQ=255)

                                                                                                                                   ggCACAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCCTTTTTTCACCTGACAAATATCGATTGGTTCATCGCCAGGTAATGTATCGGTCGCTACACTTCCCGTCGCCTGAATAATTTCTTCGATATCACTATc  <  1:1110638/140‑1 (MQ=255)

ATTTACTGGTGGTTAACAACCTTCAGAGCAGCAAGTAAGCCCGAATGCCGCCCTTTGGGCGGCATATTTTAGATTATCCGATTCTGTTTAAAGTCACGC‑‑AAAAAACCACCCCAGCGACGTTCATAGAATGGCGCAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCCTTTTTTCACCTGACAAATATCGATTGGTTCATCGCCAGGTAATGTATCGGTCGCTACACTTCCCGTCGCCTGAATAATTTCTTCGATATCACCATC  >  NC_000913/2654089‑2654357

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`