| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,053,884 | C→A | E465D (GAG→GAT) | glnG ← | DNA‑binding transcriptional dual regulator NtrC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,053,884 | 0 | C | A | 98.5% | 474.1 / 0.3 | 136 | E465D (GAG→GAT) | glnG | DNA‑binding transcriptional dual regulator NtrC |
| Reads supporting (aligned to +/- strand): ref base C (2/0); new base A (78/55); total (81/55) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.14e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.08e-01 | |||||||||||
Only 100 of 141 total aligned reads displayed.
GATTCCAGCATAATGACTCTCCCCGTTTTCCGGGCAAGATCATACTGAACTTATCGGAACAGTAAAGCGTAAAATACCAGCAATTTGCGCTCAATAATCAATCTTTACACACAAGCTGTGAATCACTCCATCCCCAGCTCTTTTAACTTACGCGTCAGGGTGTTGCGGCCCCAGCCGAGTAGCCGCGCCGCTTCCTGTTTATGCCCCTGCGTATGTCGCAACGCGGTCGTCAGTAACGTCCGCTCCAGCTCTGGCTGCGCTTCGGAAAGCAG > NC_000913/4053747‑4054018 | gATTCCAGCATAATGACTCTCCCCGTTTTCCGGGCAAGATCATACTGAACTTATCGGAACAGTAAAGCGTAAAATACCAGCAATTTGCGCTCAATAATCAATCTTTACACACAAGCTGTGAATCACTCCATCCCCAGatc > 2:1729796/1‑140 (MQ=255) aTTCCAGCATAATGACTCTCCCCGTTTTCCGGGCAAGATCATACTGAACTTATCGGAACAGTAAAGCGTAAAATACCAGCAATTTGCGCTCAATAATCAATCTTTACACACAAGCTGTGAATCACTCCATCCCCAGatct > 2:993282/1‑140 (MQ=255) aTTCCAGCATAATGACTCTCCCCGTTTTCCGGGCAAGATCATACTGAACTTATCGGAACAGTAAAGCGTAAAATACCAGCAATTTGCGCTCAATAATCAATCTTTACACACAAGCTGTGAATCACTCCATCCCCAGatct > 2:2031684/1‑140 (MQ=255) tCCAGCATAATGACTCTCCCCGTTTTCCGGGCAAGATCATACTGAACTTATCGGAACAGTAAAGCGTAAAATACCAGCAATTTGCGCTCAATAATCAATCTTTACACACAAGCTGTGAATCACTCCATCCCCAGATCttt > 2:2509476/1‑140 (MQ=255) tAATGACTCTCCCCGTTTTCCGGGCAAGATCATACTGAACTTATCGGAACAGTAAAGCGTAAAATACCAGCAATTTGCGCTCAATAATCAATCTTTACACACAAGCTGTGAATCACTCCATCCCCAGATCTTTTAACTTa < 1:993282/140‑1 (MQ=255) aaTGACTCTCCCCGTTTTCCGGGCAAGATCATACTGAACTTATCGGAACAGTAAAGCGTAAAATACCAGCAATTTGCGCTCAATAATCAATCTTTACACACAAGCTGTGAATCACTCCATCCCCAGATCTTTTAACTTAc > 1:796569/1‑140 (MQ=255) aCTCTCCCCGTTTTCCGGGCAAGATCATACTGAACTTATCGGAACAGTAAAGCGTAAAATACCAGCAATTTGCGCTCAATAATCAATCTTTACACACAAGCTGTGAATCACTCCATCCCCAGATCTTTTAACTTACGCGt < 1:1024698/140‑1 (MQ=255) ctcCCCGTTTTCCGGGCAAGATCATACTGAACTTATCGGAACAGTAAAGCGTAAAATACCAGCAATTTGCGCTCAATAATCAATCTTTACACACAAGCTGTGAATCACTCCATCCCCAGATCTTTTAACTTAcg < 1:78121/134‑1 (MQ=255) ctcCCCGTTTTCCGGGCAAGATCATACTGAACTTATCGGAACAGTAAAGCGTAAAATACCAGCAATTTGCGCTCAATAATCAATCTTTACACACAAGCTGTGAATCACTCCATCCCCAGATCTTTTAACTTAcg > 2:78121/1‑134 (MQ=255) ctcCCCGTTTTCCGGGCAAGATCATACTGAACTTATCGGAACAGTAAAGCGTAAAATACCAGCAATTTGCGCTCAATAATCAATCTTTACACACAAGCTGTGAATCACTCCATCCCCAGATCTTTTAACTTACGCGTCAg > 1:2309159/1‑140 (MQ=255) tcCCCGTTTTCCGGGCAAGATCATACTGAACTTATCGGAACAGTAAAGCGTAAAATACCAGCAATTTGCGCTCAATAATCAATCTTTACACACAAGCTGTGAATCACTCCATCCCCAGATCTTTTAACTTACGCGTCAgg > 2:1483275/1‑140 (MQ=255) tcCCCGTTTTCCGGGCAAGATCATACTGAACTTATCGGAACAGTAAAGCGTAAAATACCAGCAATTTGCGCTCAATAATCAATCTTTACACACAAGCTGTGAATCACTCCATCCCCAGATCTTTTAACTTACGCGTCAgg > 2:1982282/1‑140 (MQ=255) tcCCCGTTTTCCGGGCAAGATCATACTGAACTTATCGGAACAGTAAAGCGTAAAATACCAGCAATTTGCGCTCAATAATCAATCTTTACACACAAGCTGTGAATCACTCCATCCCCAGATCTTTTAACTTACGCGTCAgg > 2:2104254/1‑140 (MQ=255) tcCCCGTTTTCCGGGCAAGATCATACTGAACTTATCGGAACAGTAAAGCGTAAAATACCAGCAATATGCGCTCAATAATCAATCTTTACACACAAGCTGTGAATCACTCCATCCCCAGATCTTTTAACTTACGCGTCAgg > 2:1168392/1‑140 (MQ=255) cccGTTTTCCGGGCAAGATCATACTGAACTTATCGGAACAGTAAAGCGTAAAATACCAGCAATTTGCGCTCAATAATCAATCTTTACACACAAGCTGTGAATCACTCCATCCCCAGATCTTTTAACTTACGCGTCAGGgt > 1:215955/1‑140 (MQ=255) cccGTTTTCCGGGCAAGATCATACTGAACTTATCGGAACAGTAAAGCGTAAAATACCAGCAATTTGCGCTCAATAATCAATCTTTACACACAAGCTGTGAATCACTCCATCCCCAGATCTTTTAACTTACGCGTCAGGgt < 1:2361351/140‑1 (MQ=255) tttCCGGGCAAGATCATACTGAACTTATCGGAACAGTAAAGCGTAAAATACCAGCAATTTGCGCTCAATAATCAATCTTTACACACAAGCTGTGAATCACTCCATCCCCAGATCTTTTAACTTACGCGTCAGGGTGTTGc < 2:708955/140‑1 (MQ=255) gggCAAGATCATACTGAACTTATCGGAACAGTAAAGCGTAAAATACCAGCAATTTGCGCTCAATAATCAATCTTTACACACAAGCTGTGAATCACTCCATCCCCAGATCTTTTAACTTACGCGTCAGGGTGTTGCGGccc < 2:2309159/140‑1 (MQ=255) gggCAAGATCATACTGAACTTATCGGAACAGTAAAGCGTAAAATACCAGCAATTTGCGCTCAATAATCAATCTTTACACACAAGCTGTGAATCACTCCATCCCCAGATCTTTTAACTTACGCGTCAGGGTGTTGCGGccc < 2:554436/140‑1 (MQ=255) tACTGAACTTATCGGAACAGTAAAGCGTAAAATACCAGCAATTTGCGCTCAATAATCAATCTTTACACACAAGCTGTGAATCACTCCATCCCCAGATCTTTTAACTTACGCGTCAGGGTGTTGCGGCCCCAGCCGAGTAg > 2:2348978/1‑140 (MQ=255) aaCTTATCGGAACAGTAAAGCGTAAAATACCAGCAATTTGCGCTCAATAATCAATCTTTACACACAAGCTGTGAATCACTCCATCCCCAGATCTTTTAACTTACGCGTCAGGGTGTTGCGGc < 1:1962510/122‑1 (MQ=255) aaCTTATCGGAACAGTAAAGCGTAAAATACCAGCAATTTGCGCTCAATAATCAATCTTTACACACAAGCTGTGAATCACTCCATCCCCAGATCTTTTAACTTACGCGTCAGGGTGTTGCGGCCCCAGCCGAGTAgccgcg > 1:128439/1‑140 (MQ=255) aaCTTATCGGAACAGTAAAGCGTAAAATACCAGCAATTTGCGCTCAATAATCAATCTTTACACACAAGCTGTGAATCACTCCATCCCCAGATCTTTTAACTTACGCGTCAGGGTGTTGCGGCCCCAGCCGAGTAgccgcg < 1:64716/140‑1 (MQ=255) aaCTTATCGGAACAGTAAAGCGTAAAATACCAGCAATTTGCGCTCAATAATCAATCTTTACACACAAGCTGTGAATCACTCCATCCCCAGATCTTTTAACTTACGCGTCAGGGTGTTGCGGCCCCAGCCGAGTAgccgcg > 2:1155791/1‑140 (MQ=255) cTTATCGGAACAGTAAAGCGTAAAATACCAGCAATTTGCGCTCAATAATCAATCTTTACACACAAGCTGTGAATCACTCCATCCCCAGATCTTTTAACTTACGCGTCAGGGTGTTGCGGCCCCAGCCGAGTAgccgcgcc > 1:685129/1‑140 (MQ=255) cTTATCGGAACAGTAAAGCGTAAAATACCAGCAATTTGCGCTCAATAATCAATCTTTACACACAAGCTGTGAATCACTCCATCCCCAGATCTTTTAACTTACGCGTCAGGGTGTTGCGGCCCCAGCCGAGTAgccgcgcc > 2:1248566/1‑140 (MQ=255) tATCGGAACAGTAAAGCGTAAAATACCAGCAATTTGCGCTCAATAATCAATCTTTACACACAAGCTGTGAATCACTCCATCCCCAGATCTTTTGACTTACGCGTCAGGGTGTTGCGGCCCCAGCCGAGTAgccgcgccgc > 2:2392500/1‑140 (MQ=255) aTCGGAACAGTAAAGCGTAANATANCANCNNTTTGCGCTCAATAATCAATCTTTACACACAAGCTGTGAATCACTCCATCCCCAGATCTTTTAACTTACGCGTCAGGGTGTTGCGGCCCCAGCCGAGTAGCCGCGCCGCt > 2:2205030/1‑140 (MQ=255) aTCGGAACAGTAAAGCGTAAAATACCAGCAATTTGCGCTCAATAATCAATCTTTACACACAAGCTGTGAATCACTCCATCCCCAGATCTTTTAACTTACGCGTCAGGGTGTTGCGGCCCCAGCCGAGTAgccgcg > 1:554279/1‑135 (MQ=255) aTCGGAACAGTAAAGCGTAAAATACCAGCAATTTGCGCTCAATAATCAATCTTTACACACAAGCTGTGAATCACTCCATCCCCAGATCTTTTAACTTACGCGTCAGGGTGTTGCGGCCCCAGCCGAGTAgccgcg < 2:554279/135‑1 (MQ=255) aTCGGAACAGTAAAGCGTAAAATACCAGCAATTTGCGCTCAATAATCAATCTTTACACACAAGCTGTGAATCACTCCATCCCCAGATCTTTTAACTTACGCGTCAGGGTGTTGCGGCCCCAGCCGAGTAGCCGCGCCGCt < 2:155280/140‑1 (MQ=255) aTCGGAACAGTAAAGCGTAAAATACCAGCAATTTGCGCTCAATAATCAATCTTTACACACAAGCTGTGAATCACTCCATCCCCAGATCTTTTAACTTACGCGTCAGGGTGTTGCGGCCCCAGCCGAGTAGCCGCGCCGCt > 1:2419817/1‑140 (MQ=255) aTCGGAACAGTAAAGCGTAAAATACCAGCAATTTGCGCTCAATAATCAATCTTTACACACAAGCTGTGAATCACTCCATCCCCAGATCTTTTAACTTACGCGTCAGGGTGTTGCGGCCCCAGCCGAGTAGCCGCGCCGCt > 2:2337532/1‑140 (MQ=255) cGGAACAGTAAAGCGTAAAATACCAGCAATTTGCGCTCAATAATCAATCTTTACACACAAGCTGTGAATCGCTCCATCCCCAGATCTTTTAACTTACGCGTCAGGGTGTTGCGGCCCCAGCCGAGTAGCCGCGCCGCTTc < 1:2505702/140‑1 (MQ=255) cGGAACAGTAAAGCGTAAAATACCAGCAATTTGCGCTCAATAATCAATCTTTACACACAAGCTGTGAATCACTCCATCCCCAGATCTTTTAACTTACGCGTCAGGGTGTTGCGGCCCCAGCCGAGTAGCCGCGCCGCTTc < 1:2031684/140‑1 (MQ=255) cGGAACAGTAAAGCGTAAAATACCAGCAATTTGCGCTCAATAATCAATCTTTACACACAAGCTGTGAATCACTCCATCCCCAGATCTTTTAACTTACGCGTCAGGGTGTTGCGGCCCCAGCCGAGTAGCCGCGCCGCTTc < 2:796569/140‑1 (MQ=255) cGGAACAGTAAAGCGTAAAATACCAGCAATTTGCGCTCAATAATCAATCTTTACACACAAGCTGTGAATCACTCCATCCCCAGATCTTTTAACTTACGCGTCAGGGTGTTGCGGCCCCAGCCGAGTAGCCGCGCCGCTTc < 1:2210282/140‑1 (MQ=255) cGGAACAGTAAAGCGTAAAATACCAGCAATTTGCGCTCAATAATCAATCTTTACACACAAGCTGTGAATCACTCCATCCCCAGATCTTTTAACTTACGCGTCAGGGTGTTGCGGCCCCAGCCGAGTAGCCGCGCCGCTTc < 2:685129/140‑1 (MQ=255) cGGAACAGTAAAGCGTAAAATACCAGCAACTTGCGCTCAATAATCAATCTTTACACACAAGCTGTGAATCACTCCATCCCCAGATCTTTTAACTTACGCGTCAGGGTGTTGCGGCCCCAGCCGAGTAGCCGCGCCGCTTc < 1:1567217/140‑1 (MQ=255) aaCAGTAAAGCGTAAAATACCAGCAATTTGCGCTCAATAATCAATCTTTACACACAAGCTGTGAATCACTCCATCCCCAGATCTTTTAACTTACGCGTCAGGGTGTTGCGGCCCCAGCCGAGTAGCCGCGCCGCTTCCTg > 1:1368213/1‑140 (MQ=255) aGTAAAGCGTAAAATACCAGCAATTTGCGCTCAATAATCAATCTTTACACACAAGCTGTGAATCACTCCATCCCCAGATCTTTTAACTTACGCGTCAGGGTGTTGCGGCCCCAGCCGAGTAGCCGCGCCGCTTCCTGttt < 2:1398345/140‑1 (MQ=255) tAAAGCGTAAAATACCAGCAATTTGCGCTCAATAATCAATCTTTACACACAAGCTGTGAATCACTCCATCCCCAGATCTTTTAACTTACGCGTCAGGGTGTTGCGGCCCCAGCCGAGTAGCCGCGCCGCtt < 2:408173/131‑1 (MQ=255) tAAAGCGTAAAATACCAGCAATTTGCGCTCAATAATCAATCTTTACACACAAGCTGTGAATCACTCCATCCCCAGATCTTTTAACTTACGCGTCAGGGTGTTGCGGCCCCAGCCGAGTAGCCGCGCCGCTTCCTGTTTa < 2:1050449/139‑1 (MQ=255) tAAAGCGTAAAATACCAGCAATTTGCGCTCAATAATCAATCTTTACACACAAGCTGTGAATCACTCCATCCCCAGATCTTTTAACTTACGCGTCAGGGTGTTGCGGCCCCAGCCGAGTAGCCGCGCCGCTTCCTGTTTa > 1:1050449/1‑139 (MQ=255) aaaGCGTAAAATACCAGCAATTTGCGCTCAATAATCAATCTTTACACACAAGCTGTGAATCACTCCATCCCCAGATCTTTTAACTTACGCGTCAGGGTGTTGCGGCCCCAGCCGAGTAGCCGCGCCGCTTCCTGTTTATg < 1:976413/140‑1 (MQ=255) aaaGCGTAAAATACCAGCAATTTGCGCTCAATAATCAATCTTTACACACAAGCTGTGAAGCACTCCATCCCCAGATCTTTTAACTTACGCGTCAGGGTGTTGCGGCCCCAGCCGAGTAGCCGCGCCGCTTCCTGTTTATg < 2:593372/140‑1 (MQ=255) aaGCGTAAAATACCAGCAATTTGCGCTCAATAATCAATCTTTACACACAAGCTGTGAATCACTCCATCCCCAGATCTTTTAACTTACGCGTCAGGGTGTTGCGGCCCCAGCCGAGTAGCCGCGCCGCTTc > 1:473567/1‑130 (MQ=255) aaGCGTAAAATACCAGCAATTTGCGCTCAATAATCAATCTTTACACACAAGCTGTGAATCACTCCATCCCCAGATCTTTTAACTTACGCGTCAGGGTGTTGCGGCCCCAGCCGAGTAGCCGCGCCGCTTCCTGTTTATGc > 1:1725373/1‑140 (MQ=255) aGCGTAAAATACCAGCAATTTGCGCTCAATAATCAATCTTTACACACAAGCTGTGAATCACTCCATCCCCAGATCTTTTAACTTACGCGTCAGGGTGTTGCGGCCCCAGCCGAGTAGCCGCGCCGCTTCCTGTTTATGcc < 1:1286033/140‑1 (MQ=255) aaaaTACCAGCAATTTGCGCTCAATAATCAATCTTTACACACAAGCTGTGAATCACTCCATCCCCAGATCTTTTAACTTACGCGTCAGGGTGTTGCGGCCCCAGCCGAGTAGCCGCGCCGCTTCCTGTTTa < 2:1860799/131‑1 (MQ=255) aaTACCAGCAATTTGCGCTCAATAATCAATCTTTACACACAAGCTGTGAATCACTCCATCCCCAGCTCTTTTAACTTACGCGTCAGGGTGTTGCGGCCCCAGCCGAGTAGCCGCGCCGCTTCCTGTTTATGCCCCTGCGt > 1:711216/1‑140 (MQ=255) aaTACCAGCAATTTGCGCTCAATAATCAATCTTTACACACAAGCTGTGAATCACTCCATCCCCAGATCTTTTAACTTACGCGTCAGGGTGTTGCGGCCCCAGCCGAGTAGCCGCGCCGCTTCCTGTTTATGCCCCTGCGt > 1:726718/1‑140 (MQ=255) cAATTTGCGCTCAATAATCAATCTTTACACACAAGCTGTGAATCACTCCATCCCCAGATCTTTTAACTTACGCGTCAGGGTGTTGCGGCCCCAGCCGAGTAGCCGCGCCGCTTCCTGTTTATGCCCCTGCGTATGTCGCa < 2:128439/140‑1 (MQ=255) tttGCGCTCAATAATCAATCTTTACACACAAGCTGTGAATCACTCCATCCCCAGATCTTTTAACTTACGCGTCAGGGTGTTGCGGCCCCAGCCGAGTAGCCGCGCCGCTTCCTGTTTATGCCCCTGCGTATGTCGCAAcg < 1:1982282/140‑1 (MQ=255) tGCGCTCAATAATCAATCTTTACACACAAGCTGTGAATCACTCCATCCCCAGATCTTTTAACTTACGCGTCAGGGTGTTGCGGCCCCAGCCGAGTAGCCGCGCCGCTTCCTGTTTATGCCCCTGCGTATGTCGCAAcgcg < 1:1248566/140‑1 (MQ=255) cTCAATAATCAATCTTTACACACAAGCTGTGAATCACTCCATCCCCAGATCTTTTAACTTACGCGTCAGGGTGTTGCGGCCCCAGCCGAGTAGCCGCGCCGCTTCCTGTTTATGCCCCTGCGTATGTCGCAACGCGgtcg < 1:2348978/140‑1 (MQ=255) atcTTTACACACAAGCTGTGAATCACTCCATCCCCAGATCTTTTAACTTACGCGTCAGGGTGTTGCGGCCCCAGCCGAGTAGCCGCGCCGCTTCCTGTTTATGCCCCTGCGTATGTCGCAACGCGGTCGTCAGTAACGTc < 1:1483275/140‑1 (MQ=255) cTTTACACACAAGCTGTGAATCACTCCATCCCCAGATCTTTTAACTTACGCGTCAGGGTGTTGCGGCCCCAGCCGAGTAGCCGCGCCGCTTCCTGTTTATGCCCCTGCGTATGTCGCAACGCGGTCGTCAGTAACGTCCg > 1:316300/1‑140 (MQ=255) cTTTACACACAAGCTGTGAATCACTCCATCCCCAGATCTTTTAACTTACGCGTCAGGGTGTTGCGGCCCCAGCCGAGTAGCCGCGCCGCTTCCTGTTTATGCCCCTGCGTATGTCGCAACGCGGTCGTCAGTAACGTCCg > 1:388759/1‑140 (MQ=255) ttACACACAAGCTGTGAATCACTCCATCCCCAGATCTTTTAACTTACGCGTCAGGGTGTTGCGGCCCCAGCCGAGTAGCCGCGCCGCTTCCTGTTTATGCCCCTGCGTATGTCGCAACGCGGTCGTCAGTAACGTCCGCt > 2:1309258/1‑140 (MQ=255) ttACACACAAGCTGTGAATCACTCCATCCCCAGATCTTTTAACTTACGCGTCAGGGTGTTGCGGCCCCAGCCGAGTAGCCGCGCCGCTTCCTGTTTATGCCCCTGCGTATGTCGCAACGCGGTCGTCAGTAACGTCCGCt < 1:2509476/140‑1 (MQ=255) ttACACACAAGCTGTGAATCACTCCATCCCCAGATCTTTTAACTTACGCGTCAGGGTGTTGCGGCCCCAGCCGAGTAGCCGCGCCGCTTCCTGTTTATGCCCCTGCGTATGTCGCAACGCGGTCGTCAGTAACGTCCGCt > 2:2574780/1‑140 (MQ=255) ttACACACAAGCTGTGAATCACTCCATCCCCAGATCTTTTAACTTACGCGTCAGGGTGTTGCGGCCCCAGCCGAGTAGCCGCGCCGCTTCCTGTTTATGCCCCTGCGTATGTCGCAACGCGGTCGTCAGTAACGTCCGCt > 2:1772063/1‑140 (MQ=255) ttACACACAAGCTGTGAATCACTCCATCCCCAGATCTTTTAACTTACGCGTCAGGGTGTTGCGGCCCCAGCCGAGTAGCCGCGCCGCTTCCTGTTTATGCCCCTGCGTATGTCGCAACGCGGTCGTCAGTAACGTCCGCt < 1:1148457/140‑1 (MQ=255) tACACACAAGCTGTGAATCACTCCATCCCCAGATCTTTTAACTTACGCGTCAGGGTGTTGCGGCCCCAGCCGAGTAGCCGCGCCGCTTCCTGTTTATGCCCCTGCGTATGTCGCAACGCGgt < 1:1537364/122‑1 (MQ=255) tACACACAAGCTGTGAATCACTCCATCCCCAGATCTTTTAACTTACGCGTCAGGGTGTTGCGGCCCCAGCCGAGTAGCCGCGCCGCTTCCTGTTTATGCCCCTGCGTATGTCGCAACGCGgt > 2:1537364/1‑122 (MQ=255) tACACACAAGCTGTGAATCACTCCATCCCCAGATCTTTTAACTTACGCGTCAGGGTGTTGCGGCCCCAGCCGAGTAGCCGCGCCGCTTCCTGTTTATGCCCCTGCGTATGTCGCAACGCGGTCGTCAGTAACGTCCGCTc > 1:814466/1‑140 (MQ=255) tACACACAAGCTGTGAATCACTCCATCCCCAGATCTTTTAACTTACGCGTCAGGGTGTTGCGGCCCCAGCCGAGTAGCCGCGCCGCTTCCTGTTTATGCCCCTGCGTATGTCGCAACGCGGTCGTCAGTAACGTCCGCTc > 1:575459/1‑140 (MQ=255) tACACACAAGCTGTGAATCACTCCATCCCCAGATCTTTTAACTTACGCGTCAGGGTGTTGCGGCCCCAGCCGAGTAGCCGCGCCGCTTCCTGTTTATGCCCCTGCGTATGTCGCAACGCGGTCGTCAGTAACGTCCGCTc > 1:1157842/1‑140 (MQ=255) acacacAAGCTGTGAATCACTCCATCCCCAGATCTTTTAACTTACGCGTCAGGGTGTTGCGGCCCCAGCCGAGTAGCCGCGCCGCTTCCTGTTTATGCCCCTGCGTATGTCGCAACGCGGTCGTCAGTAACGTc < 1:1991020/134‑1 (MQ=255) acacacAAGCTGTGAATCACTCCATCCCCAGATCTTTTAACTTACGCGTCAGGGTGTTGCGGCCCCAGCCGAGTAGCCGCGCCGCTTCCTGTTTATGCCCCTGCGTATGTCGCAACGCGGTCGTCAGTAACGTc > 2:1991020/1‑134 (MQ=255) acacacAAGCTGTGAATCACTCCATCCCCAGATCTTTTAACTTACGCGTCAGGGTGTTGCGGCCCCAGCCGAGTAGCCGCGCCGCTTCCTGTTTATGCCCCTGCGTATGTCGCAACGCGGTCGTCAGTAACGTCCGCTcc > 1:999860/1‑140 (MQ=255) caAGCTGTGAATCACTCCATCCCCAGATCTTTTAACTTACGCGTCAGGGTGTTGCGGCCCCAGCCGAGTAGCCGCGCCGCTTCCTGTTTATGCCCCTGCGTATGTCGCAACGCGGTCGTCAGTAACGTCCGCTCCAGctc > 2:2565167/1‑140 (MQ=255) aaGCTGTGAATCACTCCATCCCCAGATCTTTTAACTTACGCGTCAGGGTGTTGCGGCCCCAGCCGAGTAGCCGCGCCGCTTCCTGTTTATGCCCCTGCGTATGTCGCAACGCGGTCGTCAGTAACGTCCGCTCCAGctct > 1:1198561/1‑140 (MQ=255) aGCTGTGAATCGCTCCATCCCCAGATCTTTTAACTTACGCGTCAGGGTGTTGCGGCCCCAGCCGAGTAGCCGCGCCGCTTCCTGTTTATGCCCCTGCGTATGTCGCAACGCGGTCGTCAGTAACGTCCGCTCCAGCTCTg > 2:1170090/1‑140 (MQ=255) cTGTGAATCACTCCATCCCCAGATCTTTTAACTTACGCGTCAGGGTGTTGCGGCCCCAGCCGAGTAGCCGCGCCGCTTCCTGTTTATGCCCCTGCGTATGTCGCAACGCGGTCGTCAGTAACGTCCGCTCCAGCTCTGGc > 1:2219239/1‑140 (MQ=255) tgtgAATCACTCCATCCCCAGATCTTTTAACTTACGCGTCAGGGTGTTGCGGCCCCAGCCGAGTAGCCGCGCCGCTTCCTGTTTATGCCCCTGCGTATGTCGCAACGCGGTCGTCAGTAACGTCCGCTCCAGCTCTGGCt < 1:1729796/140‑1 (MQ=255) gAATCACTCCATCCCCAGATCTTTTAACTTACGCGTCAGGGTGTTGCGGCCCCAGCCGAGTAGCCGCGCCGCTTCCTGTTTATGCCCCTGCGTATGTCGCAACGCGGTCGTCAGTAACGTCCGCTCCAGCTCTGGCTgcg < 2:1368213/140‑1 (MQ=255) aTCACTCCATCCCCAGATCTTTTAACTTACGCGTCAGGGTGTTGCGGCCCCAGCCGAGTAGCCGCGCCGCTTCCTGTTTATGCCCCTGCGTATGTCGCAACGCGGTCGTCAGTAACGTCCGCTCCAGCTCTGGCTGCGCt < 2:388759/140‑1 (MQ=255) aCTCCATCCCCAGATCTTTTAACTTACGCGTCAGGGTGTTGCGGCCCCAGCCGAGTAGCCGCGCCGCTTCCTGTTTATGCCCCTGCGTATGTCGCAACGCGGTCGTCAGTAACGTCCGCTCCAGCTCTGGCTGCGCTTCg > 2:2168562/1‑140 (MQ=255) aCTCCATCCCCAGATCTTTTAACTTACGCGTCAGGGTGTTGCGGCCCCAGCCGAGTAGCCGCGCCGCTTCCTGTTTATGCCCCTGCGTATGTCGCAACGCGGTCGTCAGTAACGTCCGCTCCAGCTCTGGCTGCGCTTCg > 1:1877623/1‑140 (MQ=255) cTCCATCCCCAGATCTTTTAACTTACGCGTCAGGGTGTTGCGGCCCCAGCCGAGTAGCCGCGCCGCTTCCTGTTTATGCCCCTGCGTATGTCGCAACGCGGTCGTCAGTAACGTCCGCTCCAGCTCTGGCTGCGCTTCgg > 1:1423878/1‑140 (MQ=255) cTCCATCCCCAGATCTTTTAACTTACGCGTCAGGGTGTTGCGGCCCCAGCCGAGTAGCCGCGCCGCTTCCTGTTTATGCCCCTGCGTATGTCGCAACGCGGTCGTCAGTAACGTCCGCTCCAGCTCTGGCTGCGCTTCgg > 2:2409421/1‑140 (MQ=255) tCCATCCCCAGATCTTTTAACTTACGCGTCAGGGTGTTGCGGCCCCAGCCGAGTAGCCGCGCCGCTTCCTGTTTATGCCCCTGCGTATGTCGCAACGCGGTCGTCAGTAACGTCCGCTCCAGCTCTGGCt < 2:924906/130‑1 (MQ=255) tCCATCCCCAGATCTTTTAACTTACGCGTCAGGGTGTTGCGGCCCCAGCCGAGTAGCCGCGCCGCTTCCTGTTTATGCCCCTGCGTATGTCGCAACGCGGTCGTCAGTAACGTCCGCTCCAGCTCTGGCTGCGCTTCGGa > 1:892114/1‑140 (MQ=255) tCCATCCCCAGATCTTTTAACTTACGCGTCAGGGTGTTGCGGCCCCAGCCGAGTAGCCGCGCCGCTTCCTGTTTATGCCCCTGCGTATGTCGCAACGCGGTCGTCAGTAACGTCCGCTCCAGCTCTGGCTGCGCTTCGGa > 1:899008/1‑140 (MQ=255) tCCATCCCCAGATCTTTTAACTTACGCGTCAGGGTGTTGCGGCCCCAGCCGAGTAGCCGCGCCGCTTCCTGTTTATGCCCCTGCGTATGTCGCAACGCGGTCGTCAGTAACGTCCGCTCCAGCTCTGGCTGCGCTTCGGa < 1:2409421/140‑1 (MQ=255) tCCATCCCCAGATCTTTTAACTTACGCGTCAGGGTGTTGCGGCCCCAGCCGAGTAGCCGCGCCGCTTCCTGTTTATGCCCCTGCGTATGTCGCAACGCGGTCGTCAGTAACGTCCGCTCCAGCTCTGGCTGCGCTTCGGa > 2:988772/1‑140 (MQ=255) tCCATCCCCAGATCTTTTAACTTACGCGTCAGGGTGTTGCGGCCCCAGCCGAGTAGCCGCGCCGCTTCCTGTTTATGCCCCTGCGTATGTCGCAACGCGGTCGTCAGTAACGTCCGCTCCAGCTCTGGCTGCGCTTCGGa > 2:2454627/1‑140 (MQ=255) cATCCCCAGATCTTTTAACTTACGCGTCAGGGTGTTGCGGCCCCAGCCGAGTAGCCGCGCCGCTTCCTGTTTATGCCCCTGCGTATGTCGCAACGCGGTCGTCAGTAACGTCCGCTCCAGCTCTGGCTGCGCTTCGGaaa > 2:2084598/1‑140 (MQ=255) aTCCCCAGATCTTTTAACTTACGCGTCAGGGTGTTGCGGCCCCAGCCGAGTAGCCGCGCCGCTTCCTGTTTATGCCCCTGCGTATGTCGCAACGCGGTCGTCAGTAACGTCCGCTCCAGCTCTGGCTGCGCTTCGGAAAg < 2:814466/140‑1 (MQ=255) tCCCCAGATCTTTTAACTTACGCGTCAGGGTGTTGCGGCCCCAGCCGAGTAGCCGCGCCGCTTCCTGTTTATGCCCCTGCGTATGTCGCAACGCGGTCGTCAGTAACGTCCGCTCCAGCTCTGGCt > 2:1436987/1‑126 (MQ=255) tCCCCAGATCTTTTAACTTACGCGTCAGGGTGTTGCGGCCCCAGCCGAGTAGCCGCGCCGCTTCCTGTTTATGCCCCTGCGTATGTCGCAACGCGGTCGTCAGTAACGTCCGCTCCAGCTCTGGCt < 1:1436987/126‑1 (MQ=255) tCCCCAGATCTTTTAACTTACGCGTCAGGGTGTTGCGGCCCCAGCCGAGTAGCCGCGCCGCTTCCTGTTTATGCCCCTGCGTATGTCGCAACGCGGTCGTCAGTAACGTCCGCTCCAGCTCTGGCTGCGCt > 1:2575759/1‑131 (MQ=255) tCCCCAGATCTTTTAACTTACGCGTCAGGGTGTTGCGGCCCCAGCCGAGTAGCCGCGCCGCTTCCTGTTTATGCCCCTGCGTATGTCGCAACGCGGTCGTCAGTAACGTCCGCTCCAGCTCTGGCTGCGCt < 2:2575759/131‑1 (MQ=255) tCCCCAGATCTTTTAACTTACGCGTCAGGGTGTTGCGGCCCCAGCCGAGTAGCCGCGCCGCTTCCTGTTTATGCCCCTGCGTATGTCGCAACGCGGTCGTCAGTAACGTCCGCTCCAGCTCTGGCTGCGCTTCGGAAAGc > 1:1372245/1‑140 (MQ=255) tCCCCAGATCTTTTAACTTACGCGTCAGGGTGTTGCGGCCCCAGCCGAGTAGCCGCGCCGCTTCCTGTTTATGCCCCTGCGTATGTCGCAACGCGGTCGTCAGTAACGTCCGCTCCAGCTCTGGCTGCGCTTCGGAAAGc > 1:1470106/1‑140 (MQ=255) tCCCCAGATCTTTTAACTTACGCGTCAGGGTGTTGCGGCCCCAGCCGAGTAGCCGCGCCGCTTCCTGTTTATGCCCCTGCGTATGTCGCAACGCGGTCGTCAGTAACGTCCGCTCCAGCTCTGGCTGCGCTTCGGAAAGc > 2:1028620/1‑140 (MQ=255) tCCCCAGATCTTTTAACTTACGCGTCAGGGTGTTGCGGCCCCAGCCGAGTAGCCGCGCCGCTTCCTGTTTATGCCCCTGCGTATGTCGCAACGCGGTCGTCAGTAACGTCCGCTCCAGCTCTGGCTGCGCTTCGGAAAGc < 1:2084598/140‑1 (MQ=255) cccAGATCTTTTAACTTACGCGTCAGGGTGTTGCGGCCCCAGCCGAGTAGCCGCGCCGCTTCCTGTTTATGCCCCTGCGTATGTCGCAACGCGGTCGTCAGTAACGTCCGCTCCAGCTCTGGCTGCGCTTCGGAAAGCAg < 2:899008/140‑1 (MQ=255) | GATTCCAGCATAATGACTCTCCCCGTTTTCCGGGCAAGATCATACTGAACTTATCGGAACAGTAAAGCGTAAAATACCAGCAATTTGCGCTCAATAATCAATCTTTACACACAAGCTGTGAATCACTCCATCCCCAGCTCTTTTAACTTACGCGTCAGGGTGTTGCGGCCCCAGCCGAGTAGCCGCGCCGCTTCCTGTTTATGCCCCTGCGTATGTCGCAACGCGGTCGTCAGTAACGTCCGCTCCAGCTCTGGCTGCGCTTCGGAAAGCAG > NC_000913/4053747‑4054018 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |