BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,547,721	G→T	E876* (GAA→TAA)	fimD →	type I fimbriae usher protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,547,721	0	G	T	100.0%	579.1 / NA	161	E876* (GAA→TAA)	fimD	type I fimbriae usher protein
Reads supporting (aligned to +/- strand): ref base G (0/0); new base T (80/81); total (80/81)

Only 100 of 162 total aligned reads displayed.

GTCAGGTTTACCTCAGCGGAATGCCTTTAGCGGGAAAAGTTCAGGTGAAATGGGGAGAAGAGGAAAATGCTCACTGTGTCGCCAATTATCAACTGCCACCAGAGAGTCAGCAGCAGTTATTAACCCAGCTATCAGCTGAATGTCGTTAAGGGGGCGTGATGAGAAACAAACCTTTTTATCTTCTGTGCGCTTTTTTGTGGCTGGCGGTGAGTCACGCTTTGGCTGCGGATAGCACGATTACTATCCGCGGCTATGTCAGGGATAACGGCTGTAG  >  NC_000913/4547584‑4547857

gTCAGGTTTACCTCAGCGGAATGCCTTTAGCGGGAAAAGTTCAGGTGAAATGGGGAGAAGAGGAAAATGCTCACTGTGTCGCCAATTATCAACTGCCACCAGAGAGTCAGCAGCAGTTATTAACCCAGCTATCAGCTTaa                                                                                                                                        <  1:1017834/140‑1 (MQ=255)

 tCAGGTTTACCTCAGCGGAATGCCTTTAGCGGGAAAAGTTCAGGTGAAATGGGGAGAAGAGGAAAATGCTCACTGTGTCGCCAATTATCAACTGCCACCAGAGAGTCAGCAGCAGTTATTAACCCAGCTATCAGCTTAAt                                                                                                                                       <  2:1758816/140‑1 (MQ=255)

 tCAGGTTTACCTCAGCGGAATGCCTTTAGCGGGAAAAGTTCAGGTGAAATGGGGAGAAGAGGAAAATGCTCACTGTGTCGCCAATTATCAACTGCCACCAGAGAGTCAGCAGCAGTTATTAACCCAGCTATCAGCTTAAt                                                                                                                                       <  1:1259636/140‑1 (MQ=255)

   aGGTTTACCTCAGCGGAATGCCTTTAGCGGGAAAAGTTCAGGTGAAATGGGGAGAAGAGGAAAATGCTCACTGTGTCGCCAATTATCAACTGCCACCAGAGAGTCAGCAGCAGTTATTAACCCAGCTATCAGCTTAATGt                                                                                                                                     >  1:1185211/1‑140 (MQ=255)

     gTTTACCTCAGCGGAATGCCTTTAGCGGGAAAAGTTCAGGTGAAATGGGGAGAAGAGGAAAATGCTCACTGTGTCGCCAATTATCAACTGCCACCAGAGAGTCAGCAGCAGTTATTAACCCAGCTATCAGCTTAATGTCg                                                                                                                                   <  2:1908145/140‑1 (MQ=255)

      tttACCTCAGCGGAATGCCTTTAGCGGGAAAAGTTCAGGTGAAATGGGGAGAAGAGGAAAATGCTCACTGTGTCGCCAATTATCAACTGCCACCAGAGAGTCAGCAGCAGTTATTAACCCAGCTATCAGCTTAATGTCGt                                                                                                                                  <  1:1292366/140‑1 (MQ=255)

          ccTCAGCGGAATGCCTTTAGCGGGAAAAGTTCAGGTGAAATGGGGAGAAGAGGAAAATGCTCACTGTGTCGCCAATTATCAACTGCCACCAGAGAGTCAGCAGCAGTTATTAACCCAGCTATCAGCTTAATGTCGTTAAg                                                                                                                              >  2:1078744/1‑140 (MQ=255)

          ccTCAGCGGAATGCCTTTAGCGGGAAAAGTTCAGGTGAAATGGGGAGAAGAGGAAAATGCTCACTGTGTCGCCAATTATCAACTGCCACCAGAGAGTCAGCAGCAGTTATTAACCCAGCTATCAGCTTAATGTCGTTAAg                                                                                                                              <  1:1147850/140‑1 (MQ=255)

               gCGGAATGCCTTTAGCGGGAAAAGTTCAGGTGAAATGGGGAGAAGAGGAAAATGCTCACTGTGTCGCCAATTATCAACTGCCACCAGAGAGTCAGCAGCAGTTATTAACCCAGCTATCAGCTTAATGTCGTTAAGGGGGc                                                                                                                         >  1:707542/1‑140 (MQ=255)

               gCGGAATGCCTTTAGCGGGAAAAGTTCAGGTGAAATGGGGAGAAGAGGAAAATGCTCACTGTGTCGCCAATTATCAACTGCCACCAGAGAGTCAGCAGCAGTTATTAACCCAGCTATCAGCTTAATGTCGTTAAGGGGGc                                                                                                                         >  1:1580899/1‑140 (MQ=255)

                cGGAATGCCTTTAGCGGGAAAAGTTCAGGTGAAATGGGGAGAAGAGGAAAATGCTCACTGTGTCGCCAATTATCAACTGCCACCAGAGAGTCAGCAGCAGTTATTAACCCAGCTATCAGCTTAATGTCGTTAAGGGGGCg                                                                                                                        >  2:2536963/1‑140 (MQ=255)

                  gAATGCCTTTAGCGGGAAAAGTTCAGGTGAAATGGGGAGAAGAGGAAAATGCTCACTGTGTCGCCAATTATCAACTGCCACCAGAGAGTCAGCAGCAGTTATTAACCCAGCTATCAGCTTAATGTCGTTAAGGGGGCGtg                                                                                                                      >  1:2431494/1‑140 (MQ=255)

                  gAATGCCTTTAGCGGGAAAAGTTCAGGTGAAATGGGGAGAAGAGGAAAATGCTCACTGTGTCGCCAATTATCAACTGCCACCAGAGAGTCAGCAGCAGTTATTAACCCAGCTATCAGCTTAATGTCGTTAAGGGGGCGtg                                                                                                                      <  1:211397/140‑1 (MQ=255)

                    aTGCCTTTAGCGGGAAAAGTTCAGGTGAAATGGGGAGAAGAGGAAAATGCTCACTGTGTCGCCAATTATCAACTGCCACCAGAGAGTCAGCAGCAGTTATTAACCCAGCTATCAGCTTAATGTCGTTAAGGGGGCGtgat                                                                                                                    >  2:312134/1‑140 (MQ=255)

                     tGCCTTTAGCGGGAAAAGTTCAGGTGAAATGGGGAGAAGAGGAAAATGCTCACTGTGTCGCCAATTATCAACTGCCACCAGAGAGTCAGCAGCAGTTATTAACCCAGCTATCAGCTTAATGTCGTTAAGGGGGCGtgatg                                                                                                                   <  2:1592143/140‑1 (MQ=255)

                     tGCCTTTAGCGGGAAAAGTTCAGGTGAAATGGGGAGAAGAGGAAAATGCTCACTGTGTCGCCAATTATCAACTGCCACCAGAGAGTCAGCAGCAGTTATTAACCCAGCTATCAGCTTAATGTCGTTAAGGGGGCGtgatg                                                                                                                   >  1:630459/1‑140 (MQ=255)

                     tGCCTTTAGCGGGAAAAGTTCAGGTGAAATGGGGAGAAGAGGAAAATGCTCACTGTGTAGCCAATTATCAACTGCCACCAGAGAGTCAGCAGCAGTTATTAACCCAGCTATCAGCTTAATGTCGTTAAGGGGGCGtgatg                                                                                                                   >  1:1569382/1‑140 (MQ=255)

                            aGCGGGAAAAGTTCAGGTGAAATGGGGAGAAGAGGAAAATGCTCACTGTGTCGCCAATTATCAACTGCCACCAGAGAGTCAGCAGCAGTTATTAACCCAGCTATCAGCTTAATGTCGTTAAGGGGGCGTGATGAGaaaca                                                                                                            <  1:1078744/140‑1 (MQ=255)

                            aGCGGGAAAAGTTCAGGTGAAATGGGGAGAAGAGGAAAATGCTCACTGTGTCGCCAATTATCAACTGCCACCAGAGAGTCAGCAGCAGTTATTAACCCAGCTATCAGCTTAATGTCGTTAAGGGGGCGTGATGAGaaaca                                                                                                            <  2:1045799/140‑1 (MQ=255)

                            aGCGGGAAAAGTTCAGGTGAAATGGGGAGAAGAGGAAAATGCTCACTGTGTCGCCAATTATCAACTGCCACCAGAGAGTCAGCAGCAGTTATTAACCCAGCTATCAGCTTAATGTCGTTAAGGGGGCGTGATGAGaaaca                                                                                                            <  2:2267019/140‑1 (MQ=255)

                              cGGGAAAAGTTCAGGTGAAATGGGGAGAAGAGGAAAATGCTCACTGTGTCGCCAATTATCAACTGCCACCAGAGAGTCAGCAGCAGTTATTAACCCAGCTATCAGCTTAATGTCGTTAAGGGGGCGTGATGAGaaacaaa                                                                                                          <  2:1580899/140‑1 (MQ=255)

                              cGGGAAAAGTTCAGGTGAAATGGGGAGAAGAGGAAAATGCTCACTGTGTCGCCAATTATCAACTGCCACCAGAGAGTCAGCAGCAGTTATTAACCCAGCTATCAGCTTAATGTCGTTAAGGGGGCGTGATGAGaaacaaa                                                                                                          <  2:707542/140‑1 (MQ=255)

                                ggAAAAGTTCAGGTGAAATGGGGAGAAGAGGAAAATGCTCACTGTGTCGCCAATTATCAACTGCCACCAGAGAGTCAGCAGCAGTTATTAACCCAGCTATCAGCTTAATGTCGTTAAGGGGGCGTGATGAGAAACAAAcc                                                                                                        <  1:150411/140‑1 (MQ=255)

                                ggAAAAGTTCAGGTGAAATGGGGAGAAGAGGAAAATGCTCACTGTGTCGCCAATTATCAACTGCCACCAGAGAGTCAGCAGCAGTTATTAACCCAGCTATCAGCTTAATGTCGTTAAGGGGGCGTGATGAGAAACAAAcc                                                                                                        <  2:1229744/140‑1 (MQ=255)

                                ggAAAAGTTCAGGTGAAATGGGGAGAAGAGGAAAATGCTCACTGTGTCGCCAATTATCAACTGCCACCAGAGAGTCAGCAGCAGTTATTAACCCAGCTATCAGCTTAATGTCGTTAAGGGGGCGTGATGAGAAACAAAcc                                                                                                        <  1:1390055/140‑1 (MQ=255)

                                 gAAAAGTTCAGGTGAAATGGGGCGAAGAGGAAAATGCTCACTGTGTCGCCAATTATCAACTGCCACCAGAGAGTCAGCAGCAGTTATTAACCCAGCTATCAGCTTAATGTCGTTAAGGGGGCGTGATGAGAAACAAACCt                                                                                                       >  2:1543832/1‑140 (MQ=255)

                                 gAAAAGTTCAGGTGAAATGGGGAGAAGAGGAAAATGCTCACTGTGTCGCCAATTATCAACTGCCACCAGAGAGTCAGCAGCAGTTATTAACCCAGCTATCAGCTTAATGTCGTTAAGGGGGCGTGATGAGAAACAAACCt                                                                                                       >  2:1364018/1‑140 (MQ=255)

                                       ttCAGGTGAAATGGGGAGAAGAGGAAAATGCTCACTGTGTCGCCAATTATCAACTGCCACCAGAGAGTCAGCAGCAGTTATTAACCCAGCTATCAGCTTAATGTCGTTAAGGGGGCGTGATGAGAAACAAACCTTTTTAt                                                                                                 >  1:534249/1‑140 (MQ=255)

                                            gTGAAATGGGGAGAAGAGGAAAATGCTCACTGTGTCGCCAATTATCAACTGCCACCAGAGAGTCAGCAGCAGTTATTAACCCAGCTATCAGCTTAATGTCGTTAAGGGGGCGTGATGAGAAACAAACCTTTTTAtcttct                                                                                            <  1:1749166/140‑1 (MQ=255)

                                            gTGAAATGGGGAGAAGAGGAAAATGCTCACTGTGTCGCCAATTATCAACTGCCACCAGAGAGTCAGCAGCAGTTATTAACCCAGCTATCAGCTTAATGTCGTTAAGGGGGCGTGATGAGAAACAAACCTTTTTAt                                                                                                 <  2:2023983/135‑1 (MQ=255)

                                              gAAATGGGGAGAAGAGGAAAATGCTCACTGTGTCGCCAATTATCAACTGCCACCAGAGAGTCAGCAGCAGTTATTAACCCAGCTATCAGCTTAATGTCGTTAAGGGGGCGTGATGAGAAACAAACCTTTTTATCTTCtgt                                                                                          <  1:409235/140‑1 (MQ=255)

                                                      gagaAGAGGAAAATGCTCACTGTGTCGCCAATTATCAACTGCCACCAGAGAGTCAGCAGCAGTTATTAACCCAGCTATCAGCTTAATGTCGTTAAGGGGGCGTGATGAGAAACAAACCTTTTTATCTTCTGTGCGCtttt                                                                                  >  1:1517413/1‑140 (MQ=255)

                                                      gagaAGAGGAAAATGCTCACTGTGTCGCCAATTATCAACTGCCACCAGAGAGTCAGCAGCAGTTATTAACCCAGCTATCAGCTTAATGTCGTTAAGGGGGCGTGATGAGAAACAAACCTTTTTATCTTCTGTGCGCtttt                                                                                  >  2:59464/1‑140 (MQ=255)

                                                      gagaAGAGGAAAATGCTCACTGTGTCGCCAATTATCAACTGCCACCAGAGAGTCAGCAGCAGTTATTAACCCAGCTATCAGCTTAATGTCGTTAAGGGGGCGTGATGAGAAACAAACCTTTTTATCTTCTGTGCGCtttt                                                                                  >  2:1955701/1‑140 (MQ=255)

                                                        gaagaGGAAAATGCTCACTGTGTCGCCAATTATCAACTGCCACCAGAGAGTCAGCAGCAGTTATTAACCCAGCTATCAGCTTAATGTCGTTAAGGGGGCGTGATGAGAAACAAACCTTTTTATCTTCTGTGCGCtttttt                                                                                <  1:2048212/140‑1 (MQ=255)

                                                         aagaGGAAAATGCTCACTGTGTCGCCAATTATCAACTGCCACCAGAGAGTCAGCAGCAGTTATTAACCCAGCTATCAGCTTAATGTCGTTAAGGGGGCGTGATGAGAAACAAACCTTTTTATCTTCTGTGCGCTTTTTtg                                                                               >  2:803541/1‑140 (MQ=255)

                                                         aagaGGAAAATGCTCACTGTGTCGCCAATTATCAACTGCCACCAGAGAGTCAGCAGCAGTTATTAACCCAGCTATCAGCTTAATGTCGTTAAGGGGGCGTGATGAGAAACAAACCTTTTTATCTTCTGTGCGCTTTTTtg                                                                               >  1:308323/1‑140 (MQ=255)

                                                         aagaGGAAAATGCTCACTGTGTCGCCAATTATCAACTGCCACCAGAGAGTCAGCAGCAGTTATTAACCCAGCTATCAGCTTAATGTCGTTAAGGGGGCGTGATGAGAAACAAACCTTTTTATCTTCTGTGCGCTTTTTtg                                                                               <  1:1955701/140‑1 (MQ=255)

                                                             ggAAAATGCTCACTGTGTCGCCAATTATCAACTGCCACCAGAGAGTCAGCAGCAGTTATTAACCCAGCTATCAGCTTAATGTCGTTAAGGGGGCGTGATGAGAAACAAACCTTTTTATCTTCTGTGCGCTTTTTTGtggc                                                                           >  1:1339592/1‑140 (MQ=255)

                                                              gAAAATGCTCACTGTGTCGCCAATTATCAACTGCCACCAGAGAGTCAGCAGCAGTTATTAACCCAGCTATCAGCTTAATGTCGTTAAGGGGGCGTGATGAGAAACAAACCTTTTTATCTTCTGTGCGCTTTTTTGtggct                                                                          <  1:1812862/140‑1 (MQ=255)

                                                                  aTGCTCACTGTGTCGCCAATTATCAACTGCCACCAGAGAGTCAGCAGCAGTTATTAACCCAGCTATCAGCTTAATGTCGTTAAGGGGGCGTGATGAGAAACAAACCTTTTTATCTTCTGTGCGCTTTTTTGTGGCTGGCg                                                                      <  1:2352792/140‑1 (MQ=255)

                                                                   tGCTCACTGTGTCGCCAATTATCAACTGCCACCAGAGAGTCAGCAGCAGTTATTAACCCAGCTATCAGCTTAATGTCGTTAAGGGGGCGTGATGAGAAACAAACCTTTTTATCTTCTGTGCGCTTTTTTGTGGCTGGCgg                                                                     >  2:424804/1‑140 (MQ=255)

                                                                    gCTCACTGTGTCGCCAATTATCAACTGCCACCAGAGAGTCAGCAGCAGTTATTAACCCAGCTATCAGCTTAATGTCGTTAAGGGGGCGTGATGAGAAACAAACCTTTTTATCTTCTGTGCGCTTTTTTGTGGCTGGCGGt                                                                    <  1:566391/140‑1 (MQ=255)

                                                                    gCTCACTGTGTCGCCAATTATCAACTGCCACCAGAGAGTCAGCAGCAGTTATTAACCCAGCTATCAGCTTAATGTCGTTAAGGGGGCGTGATGAGAAACAAACCTTTTTATCTTCTGTGCGCTTTTTTGTGGCTGGCGGt                                                                    <  1:1726185/140‑1 (MQ=255)

                                                                     cTCACTGTGTCGCCAATTATCAACTGCCACCAGAGAGTCAGCAGCAGTTATTAACCCAGCTATCAGCTTAATGTCGTTAAGGGGGCGTGATGAGAAACAAACCTTTTTATCTTCTGTGCGCTTTTTTGTGGCTGGCGGTg                                                                   >  1:2181204/1‑140 (MQ=255)

                                                                       cACTGTGTCGCCAATTATCAACTGCCACCAGAGAGTCAGCAGCAGTTATTAACCCAGCTATCAGCTTAATGTCGTTAAGGGGGCGTGATGAGAAACAAACCTTTTTATCTTCTGTGCGCTTTTTTGTGGCTGGCGGTGAg                                                                 >  1:1843480/1‑140 (MQ=255)

                                                                        aCTGTGTCGCCAATTATCAACTGCCACCAGAGAGTCAGCAGCAGTTATTAACCCAGCTATCAGCTTAATGTCGTTAAGGGGGCGTGATGAGAAACAAACCTTTTTATCTTCTGTGCGCTTTTTTGTGGCTGGCGGTGAGt                                                                >  2:2377041/1‑140 (MQ=255)

                                                                         cTGTGTCGCCAATTATCAACTGCCACCAGAGAGTCAGCAGCAGTTATTAACCCAGCTATCAGCTTAATGTCGTTAAGGGGGCGTGATGAGAAACAAACCTTTTTATCTTCTGTGCGCTTTTTTGTGGCTGGCGGTGAGTc                                                               >  1:2252429/1‑140 (MQ=255)

                                                                           gtgtCGCCAATTATCAACTGCCACCAGAGAGTCAGCAGCAGTTATTAACCCAGCTATCAGCTTAATGTCGTTAAGGGGGCGTGATGAGAAACAAACCTTTTTATCTTCTGTGCGCTTTTTTGTGGCTGGCGGTGAGTCAc                                                             >  1:2164057/1‑140 (MQ=255)

                                                                            tgtCGCCAATTATCAACTGCCACCAGAGAGTCAGCAGCAGTTATTAACCCAGCTATCAGCTTAATGTCGTTAAGGGGGCGTGATGAGAAACAAACCTTTTTATCTTCTGTGCGCTTTTTTGTGGCTGGCGGGGAGTCACg                                                            >  2:930836/1‑140 (MQ=255)

                                                                              tCGCCAATTATCAACTGCCACCAGAGAGTCAGCAGCAGTTATTAACCCAGCTATCAGCTTAATGTCGTTAAGGGGGCGTGATGAGAAACAAACCTTTTTATCTTCTGTGCGCTTTTTTGTGGCTGGCGGTGAGt                                                                <  1:1233674/134‑1 (MQ=255)

                                                                                    aTTATCAACTGCCACCAGAGAGTCAGCAGCAGTTATTAACCCAGCTATCAGCTTAATGTCGTTAAGGGGGCGTGATGAGAAACAAACCTTTTTATCTTCTGTGCGCTTTTTTGTGGCTGGCGGTGAGTCACGCTTTGGCt                                                    <  2:2164057/140‑1 (MQ=255)

                                                                                    aTTATCAACTGCCACCAGAGAGTCAGCAGCAGTTATTAACCCAGCTATCAGCTTAATGTCGTTAAGGGGGCGTGATGAGAAACAAACCTTTTTATCTTCTGTGCGCTTTTTTGTGGCTGGCGGTGAGTCACGCTTTGGCt                                                    >  1:1196101/1‑140 (MQ=255)

                                                                                      tATCAACTGCCACCAGAGAGTCAGCAGCAGTTATTAACCCAGCTATCAGCTTAATGTCGTTAAGGGGGCGTGATGAGAAACAAACCTTTTTATCTTCTGTGCGCTTTTTTGTGGCTGGCGGt                                                                    <  1:2045139/122‑1 (MQ=255)

                                                                                         cAACTGCCACCAGAGAGTCCGCAGCAGTTAATTACCCAGCTATCAGCTTAATGTCGTTAAGGGGGCGTGATGAGAAACAAACCTTTTTATCTTCTGTGCGCTTTTTTGTGGCTGGCGGTGAGTCACGCTTTGGCTGCGGa                                               <  1:1634868/140‑1 (MQ=255)

                                                                                          aaCTGCCACCAGAGAGTCAGCAGCAGTTATTAACCCAGCTATCAGCTTAATGTCGTTAAGGGGGCGTGATGAGAAACAAACCTTTTTATCTTCTGTGCGCTTTTTTGTGGCTGGCGGTGAGTCACGCTTTGGCTGCGGAt                                              <  2:2252429/140‑1 (MQ=255)

                                                                                          aaCTGCCACCAGAGAGTCAGCAGCAGTTATTAACCCAGCTATCAGCTTAATGTCGTTAAGGGGGCGTGATGAGAAACAAACCTTTTTATCTTCTGTGCGCTTTTTTGTGGCTGGCGGTGAGTCACGCTTTGGCTGCGGAt                                              <  1:59464/140‑1 (MQ=255)

                                                                                          aaCTGCCACCAGAGAGTCAGCAGCAGTTATTAACCCAGCTATCAGCTTAATGTCGTTAAGGGGGCGTGATGAGAAACAAACCTTTTTATCTTCTGTGCGCTTTTTTGTGGCTGGCGGTGAGTCACGCTTTGGCTGCGGAt                                              <  1:2377041/140‑1 (MQ=255)

                                                                                            cTGCCACCAGAGAGTCAGCAGCAGTTATTAACCCAGCTATCAGCTTAATGTCGTTAAGGGGGCGTGATGAGAAACAAACCTTTTTATCTTCTGTGCGCTTTTTTGTGGCTGGCGGTGAGTCACGCTTTGGCTGCGGATAg                                            <  2:1583956/140‑1 (MQ=255)

                                                                                              gCCACCAGAGAGTCAGCAGCAGTTATTAACCCAGCTATCAGCTTAATGTCGTTAAGGGGGCGTGATGAGAAACAAACCTTTTTATCTTCTGTGCTCTTTTTTGTGGCTGGCGGTGAGTCACGCTTTGGCTGCGGATAGCa                                          <  2:733006/140‑1 (MQ=255)

                                                                                              gCCACCAGAGAGTCAGCAGCAGTTATTAACCCAGCTATCAGCTTAATGTCGTTAAGGGGGCGTGATGAGAAACAAACCTTTTTATCTTCTGTGCGCTTTTTTGTGGCTGGCGGTGAGTCACGCTTTGGCTGCGGATAGCa                                          <  2:1834787/140‑1 (MQ=255)

                                                                                              gCCACCAGAGAGTCAGCAGCAGTTATTAACCCAGCTATCAGCTTAATGTCGTTAAGGGGGCGTGATGAGAAACAAACCTTTTTATCTTCTGTGCGCTTTTTTGTGGCTGGCGGTGAGTCACGCTTTGGCTGCGGATAGCa                                          <  2:308323/140‑1 (MQ=255)

                                                                                               ccaccaGAGAGTCAGCAGCAGTTATTAACCCAGCTATCAGCTTAATGTCGTTAAGGGGGCGTGATGAGAAACAAACCTTTTTATCTTCTGTGCGCTTTTTTGTGGCTGGCGGTGAGTCACGCTTTg                                                       >  1:299557/1‑126 (MQ=255)

                                                                                               ccaccaGAGAGTCAGCAGCAGTTATTAACCCAGCTATCAGCTTAATGTCGTTAAGGGGGCGTGATGAGAAACAAACCTTTTTATCTTCTGTGCGCTTTTTTGTGGCTGGCGGTGAGTCACGCTTTGGCTg                                                   <  1:1032096/130‑1 (MQ=255)

                                                                                               ccaccaGAGAGTCAGCAGCAGTTATTAACCCAGCTATCAGCTTAATGTCGTTAAGGGGGCGTGATGAGAAACAAACCTTTTTATCTTCTGTGCGCTTTTTTGTGGCTGGCGGTGAGTCACGCTTTGGCTGCGGATAGCa                                          >  2:1260475/1‑139 (MQ=255)

                                                                                               ccaccaGAGAGTCAGCAGCAGTTATTAACCCAGCTATCAGCTTAATGTCGTTAAGGGGGCGTGATGAGAAACAAACCTTTTTATCTTCTGTGCGCTTTTTTGTGGCTGGCGGTGAGTCACGCTTTGGCTGCGGATAGCAc                                         >  2:1324717/1‑140 (MQ=255)

                                                                                               ccaccaGAGAGTCAGCAGCAGTTATTAACCCAGCTATCAGCTTAATGTCGTTAAGGGGGCGTGATGAGAAACAAACCTTTTTATCTTCTGTGCGCTTTTTTGTGGCTGGCGGTGAGTCACGCTTTGGCTGCGGATAGCAc                                         >  2:2483974/1‑140 (MQ=255)

                                                                                                  ccaGAGAGTCAGCAGCAGTTATTAACCCAGCTATCAGCTTAATGTCGTTAAGGGGGCGTGATGAGAAACAAACCTTTTTATCTTCTGTGCGCTTTTTTGTGGCTGGCGGTGAGTCACGCTTTGGCTGCGGATAGCACGAt                                      >  1:92832/1‑140 (MQ=255)

                                                                                                  ccaGAGAGTCAGCAGCAGTTATTAACCCAGCTATCAGCTTAATGTCGTTAAGGGGGCGTGATGAGAAACAAACCTTTTTATCTTCTGTGCGCTTTTTTGTGGCTGGCGGTGAGTCACGCTTTGGCTGCGGATAGCACGAt                                      >  2:235468/1‑140 (MQ=255)

                                                                                                   caGAGAGTCAGCAGCAGTTATTAACCCAGCTATCAGCTTAATGTCGTTAAGGGGGCGTGATGAGAAACAAACCTTTTTATCTTCTGTGCGCTTTTTTGTGGCTGGCGGTGAGTCACGCTTTGGCTGCGGATAGCACGAtt                                     >  2:1662021/1‑140 (MQ=255)

                                                                                                         gTCAGCAGCAGTTATTAACCCAGCTATCAGCTTAATGTCGTTAAGGGGGCGTGATGAGAAACAAACCTTTTTATCTTCTGTGCGCTTTTTTGTGGCTGGCGGTGAGTCACGCTTTGGCTGCGGATAGCACGATTACTATc                               <  2:1537431/140‑1 (MQ=255)

                                                                                                          tCAGCAGCAGTTATTAACCCAGCTATCAGCTTAATGTCGTTAAGGGGGCGTGATGAGAAACAAACCTTTTTATCTTCTGTGCTCTTTTTTGTGGCTGGCGGTGAGTCACGCTTTGGCTGCGGATAGCACGATTACTATcc                              <  2:1793178/140‑1 (MQ=255)

                                                                                                          tCAGCAGCAGTTATTAACCCAGCTATCAGCTTAATGTCGTTAAGGGGGCGTGATGAGAAACAAACCTTTTTATCTTCTGTGCGCTTTTTTGTGGCTGGCGGTGAGTCACGCTTTGGCTGCGGATAGCGCGATTACTATcc                              <  2:618717/140‑1 (MQ=255)

                                                                                                          tCAGCAGCAGTTATTAACCCAGCTATCAGCTTAATGTCGTTAAGGGGGCGTGATGAGAAACAAACCTTTTTATCTTCTGTGCGCTTTTTTGTGGCTAGCGGTGAGTCACGCTTTGGCTGCGGATAGCACGATTACTATcc                              <  2:534249/140‑1 (MQ=255)

                                                                                                               agcagTTATTAACCCAGCTATCAGCTTAATGTCGTTAAGGGGGCGTGATGAGAAACAAACCTTTTTATCTTCTGTGCGCTTTTTTGTGGCTGGCGGTGAGTCACGCTTTGGCTGCGGATAGCACGATTACTATCCGCGGc                         <  1:2483974/140‑1 (MQ=255)

                                                                                                                gcagTTATTAACCCAGCTATCAGCTTAATGTCGTTAAGGGGGCGTGATGAGAAACAAACCTTTTTATCTTCTGTGCGCTTTTTTGTGGCTGGCGGTGAGTCACGCTTTGGCTGCGGATAGCACGATTACTATCCGCGGCt                        <  1:2362855/140‑1 (MQ=255)

                                                                                                                gcagTTATTAACCCAGCTATCAGCTTAATGTCGTTAAGGGGGCGTGATGAGAAACAAACCTTTTTATCTTCTGTGCGCTTTTTTGTGGCTGGCGGTGAGTCACGCTTTGGCTGCGGATAGCACGATTACTATCCGCGGCt                        <  2:2421400/140‑1 (MQ=255)

                                                                                                                  agTTATTAACCCAGCTATCAGCTTAATGTCGTTAAGGGGGCGTGATGAGAAACAAACCTTTTTATCTTCTGTGCGCTTTTTTGTGGCTGGCGGTGAGTCACGCTTTGGCTGCGGATAGCACGATTACTATCCGCGGCTAt                      >  1:1992992/1‑140 (MQ=255)

                                                                                                                   gTTATTAACCCAGCTATCAGCTTAATGTCGTTAAGGGGGCGTGATGAGAAACAAACCTTTTTATCTTCTGTGCGCTTTTTTGTGGCTGGCGGTGAGTCACGCTTTGGCTGCGGATAGCACGATTACTATCCGCGGCTATg                     >  2:2058088/1‑140 (MQ=255)

                                                                                                                    ttattaACCCAGCTATTAGCTTAATGTCGTTAAGGGGGCGTGATGAGAAACAAACCTTTTTATCTTCTGTGCGCTTTTTTGTGGCTGGCGGTGAGTCACGCTTTGGCTGCGGATAGCACGATTACTATCCGCGGCTATGt                    >  2:1635001/1‑140 (MQ=255)

                                                                                                                    ttattaACCCAGCTATCAGCTTAATGTCGTTAAGGGGGCGTGATGAGAAACAAACCTTTTTATCTTCTGTGCGCTTTTTTGTGGCTGGCGGTGAGTCACGCTTTGGCTGCGGATAGCACGATTACTATCCGCGGCTATGt                    <  2:1442367/140‑1 (MQ=255)

                                                                                                                      attaACCCAGCTATCAGCTTAATGTCGTTAAGGGGGCGTGATGAGAAACAAACCTTTTTATCTTCTGTGCGCTTTTTTGTGGCTGGCGGTGAGTCACGCTTTGGCTGCGGATAGCACGATTACTATCCGCGGCTATGTCa                  <  1:930836/140‑1 (MQ=255)

                                                                                                                      attaACCCAGCTATCAGCTTAATGTCGTTAAGGGGGCGTGATGAGAAACAAACCTTTTTATCTTCTGTGCGCTTTTTTGTGGCTGGCGGTGAGTCACGCTTTGGCTGCGGATAGCACGATTACTATCCGCGGCTATGTCa                  <  1:1324717/140‑1 (MQ=255)

                                                                                                                        taACCCAGCTATCAGCTTAATGTCGTTAAGGGGGCGTGATGAGAAACAAACCTTTTTATCTTCTGTGCGCTTTTTTGTGGCTGGCGGTGAGTCACGCTTTGGCTGCGGATAGCACGATTACTATCCGCGGCTATGTCAgg                >  2:1010924/1‑140 (MQ=255)

                                                                                                                           cccAGCTATCAGCTTAATGTCGTTAAGGGGGCGTGATGAGAAACAAACCTTTTTATCTTCTGTGCGCTTTTTTGTGGCTGGCGGTGAGTCACGCTTTGGCTGCGGATAGCACGATTACTATCCGCGGCTATGTCAGGGAt             <  2:291551/140‑1 (MQ=255)

                                                                                                                           cccAGCTATCAGCTTAATGTCGTTAAGGGGGCGTGATGAGAAACAAACCTTTTTATCTTCTGTGCGCTTTTTTGTGGCTGGCGGTGAGTCACGCTTTGGCTGCGGATAGCACGATTACTATCCGCGGCTATGTCAGGGAt             <  1:2111641/140‑1 (MQ=255)

                                                                                                                             cAGCTATCAGCTTAATGTCGTTAAGGGGGCGTGATGAGAAACAAACCTTTTTATCTTCTGTGCGCTTTTTTGTGGCTGGCGGTGAGTCACGCTTTGGCTGCGGATAGCACGATTACTATCCGCGGCTATGTCAGGGATaa           <  1:958455/140‑1 (MQ=255)

                                                                                                                             cAGCTATCAGCTTAATGTCGTTAAGGGGGCGTGATGAGAAACAAACCTTTTTATCTTCTGTGCGCTTTTTTGTGGCTGGCGGTGAGTCACGCTTTGGCTGCGGATAGCACGATTACTATCCGCGGCTATGTCAGGGATaa           <  2:1730636/140‑1 (MQ=255)

                                                                                                                              aGCTATCAGCTTAATGTCGTTAAGGGGGCGTGATGAGAAACAAACCTTTTTATCTTCTGTGCGCTTTTTTGTGGCTGGCGGTGAGTCACGCTTTGGCTGCGGATAGCACGATTACTATCCGCGGCTATGTCAGGGATAAc          >  1:1707707/1‑140 (MQ=255)

                                                                                                                               gCTATCAGCTTAATGTCGTTAAGGGGGCGTGATGAGAAACAAACCTTTTTATCTTCTGTGCGCTTTTTTGTGGCTGGCGGTGAGTCACGCTTTGGCTGCGGATAGCACGATTACTATCCGCGGCTATGTCAGGGATAACg         >  1:2196773/1‑140 (MQ=255)

                                                                                                                                cTATCAGCTTAATGTCGTTAAGGGGGCGTGATGAGAAACAAACCTTTTTATCTTCTGTGCGCTTTTTTGTGGCTGGCGGTGAGTCACGCTTTGGCTGCGGATAGCACGATTACTATCCGCGGCTATGTCAGGGATAACgg        >  2:2091033/1‑140 (MQ=255)

                                                                                                                                cTATCAGCTTAATGTCGTTAAGGGGGCGTGATGAGAAACAAACCTTTTTATCTTCTGTGCGCTTTTTTGTGGCTGGCGGCGAGTCACGCTTTGGCTGCGGATAGCACGATTACTATCCGCGGCTATGTCAGGGATAACgg        >  1:876871/1‑140 (MQ=255)

                                                                                                                                 tATCAGCTTAATGTCGTTAAGGGGGCGTGATGAGAAACAAACCTTTTTATCTTCTGTGCGCTTTTTTGTGGCTGGCGGTGAGTCACGCTTTGGCTGCGGATAGCACGATTACTATCCGCGGCTATGTCAGGGATAACGGc       <  2:1209077/140‑1 (MQ=255)

                                                                                                                                 tATCAGCTTAATGTCGTTAAGGGGGCGTGATGAGAAACAAACCTTTTTATCTTCTGTGCGCTTTTTTGTGGCTGGCGGTGAGTCACGCTTTGGCTGCGGATAGCACGATTACTATCCGCGGCTATGTCAGGGATAACGGc       <  2:505713/140‑1 (MQ=255)

                                                                                                                                    cAGCTTAATGTCGTTAAGGGGGCGTGATGAGAAACAAACCTTTTTATCTTCTGTGCGCTTTTTTGTGGCTGGCGGTGAGTCACGCTTTGGCTGCGGATAGCACGATTACTATCCGCGGCTATGTCAgg                >  1:107671/1‑128 (MQ=255)

                                                                                                                                    cAGCTTAATGTCGTTAAGGGGGCGTGATGAGAAACAAACCTTTTTATCTTCTGTGCGCTTTTTTGTGGCTGGCGGTGAGTCACGCTTTGGCTGCGGATAGCACGATTACTATCCGCGGCTATGTCAgg                <  2:107671/128‑1 (MQ=255)

                                                                                                                                     aGCTTAATGTCGTTAAGGGGGCGTGATGAGAAACAAACCTTTTTATCTTCTGTGCGCTTTTTTGTGGCTGGCGGTGAGTCACGCTTTGGCTGCGGATAGCACGATTACTATCCGCGGCTATGTCAGGGATAACGGCTGTa   >  1:1945485/1‑140 (MQ=255)

                                                                                                                                      gCTTAATGTCGTTAAGGGGGCGTGATGAGAAACAAACCTTTTTATCTTCTGTGCGCTTTTTTGTGGCTGGCGGTGAGTCACGCTTTGGCTGCGGATAGCACGATTACTATCCGCGGCTATGTCAGGGATAACGGCTGTAg  >  1:357432/1‑140 (MQ=255)

                                                                                                                                      gCTTAATGTCGTTAAGGGGGCGTGATGAGAAACAAACCTTTTTATCTTCTGTGCGCTTTTTTGTGGCTGGCGGTGAGTCACGCTTTGGCTGCGGATAGCACGATTACTATCCGCGGCTATGTCAGGGATAACGGCTGTAg  <  1:724643/140‑1 (MQ=255)

                                                                                                                                      gCTTAATGTCGTTAAGGGGGCGTGATGAGAAACAAACCTTTTTATCTTCTGTGCGCTTTTTTGTGGCTGGCGGTGAGTCACGCTTTGGCTGCGGATAGCACGATTACTATCCGCGGCTATGTCAGGGATAACGGCTGTAg  >  2:1717371/1‑140 (MQ=255)

GTCAGGTTTACCTCAGCGGAATGCCTTTAGCGGGAAAAGTTCAGGTGAAATGGGGAGAAGAGGAAAATGCTCACTGTGTCGCCAATTATCAACTGCCACCAGAGAGTCAGCAGCAGTTATTAACCCAGCTATCAGCTGAATGTCGTTAAGGGGGCGTGATGAGAAACAAACCTTTTTATCTTCTGTGCGCTTTTTTGTGGCTGGCGGTGAGTCACGCTTTGGCTGCGGATAGCACGATTACTATCCGCGGCTATGTCAGGGATAACGGCTGTAG  >  NC_000913/4547584‑4547857

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`