BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,791,325	C→A	L7L (CTG→CTT)	tdh ←	threonine dehydrogenase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,791,325	0	C	A	100.0%	636.6 / NA	177	L7L (CTG→CTT)	tdh	threonine dehydrogenase
Reads supporting (aligned to +/- strand): ref base C (0/0); new base A (84/93); total (84/93)

Only 100 of 178 total aligned reads displayed.

TTTGCGACCACTCATCCCAGTTATAGATGTGAACGTCAGTCCCGCAGATGGCTGTTTTACGGATTTTAATCAGCAGATCGTTATGCCCGAGTTCCGGTACAGGAACGTCGGTCATCCAGATGCCCTCTTCCGCTTTCAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACGCCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTTGCTCAGGGGTATGCGCCGCAGACATCTGGGTACGAATACGCGCCT  >  NC_000913/3791189‑3791461

tttGCGACCACTCATCCCAGTTATAGATGTGAACGTCAGTCCCGCAGATGGCTGTTTTACGGATTTTAATCAGCAGATCGTTATGCCCGAGTTCCGGTACAGGAACGTCGGTCATCCAGATGCCCTCTTCCGCTTTAAGt                                                                                                                                       <  1:1253554/140‑1 (MQ=255)

  tGCGACCACTCATCCCAGTTATAGATGTGAACGTCAGTCCCGCAGATGGCTGTTTTACGGATTTTAATCAGCAGATCGTTATGCCCGAGTTCCGGTACAGGAACGTCGGTCATCCAGATGCCCTCTTCCGCTTTAAGt                                                                                                                                       >  1:1068305/1‑138 (MQ=255)

  tGCGACCACTCATCCCAGTTATAGATGTGAACGTCAGTCCCGCAGATGGCTGTTTTACGGATTTTAATCAGCAGATCGTTATGCCCGAGTTCCGGTACAGGAACGTCGGTCATCCAGATGCCCTCTTCCGCTTTAAGt                                                                                                                                       <  2:1068305/138‑1 (MQ=255)

    cGACCACTCATCCCAGTTATAGATGTGAACGTCAGTCCCGCAGATGGCTGTTTTACGGATTTTAATCAGCAGATCGTTATGCCCGAGTTCCGGTACAGGAACGTCGGTCATCCAGATGCCCTCTTCCGCTTTAAGTTTgg                                                                                                                                   >  1:822766/1‑140 (MQ=255)

      aCCACTCATCCCAGTTATAGATGTGAACGTCAGTCCCGCAGATGGCTGTTTTACGGATTTTAATCAGCAGATCGTTATGCCCGAGTTCCGGTACAGGAACGTCGGTCATCCAGATGCCCTCTTCCGCTTTAAGTTTGGAt                                                                                                                                 >  1:368598/1‑140 (MQ=255)

      aCCACTCATCCCAGTTATAGATGTGAACGTCAGTCCCGCAGATGGCTGTTTTACGGATTTTAATCAGCAGATCGTTATGCCCGAGTTCCGGTACAGGAACGTCGGTCATCCAGATGCCCTCTTCCGCTTTAAGTTTGGAt                                                                                                                                 >  2:525718/1‑140 (MQ=255)

      aCCACTCATCCCAGTTATAGATGTGAACGTCAGTCCCGCAGATGGCTGTTTTACGGATTTTAATCAGCAGATCGTTATGCCCGAGTTCCGGTACAGGAACGTCGGTCATCCAGATGCCCTCTTCCGCTTTAAGTTTGGAt                                                                                                                                 <  1:1487205/140‑1 (MQ=255)

        cACTCATCCCAGTTATAGATGTGAACGTCAGTCCCGCAGATGGCTGTTTTACGGATTTTAATCAGCAGATCGTTATGCCCGAGTTCCGGTACAGGAACGTCGGTCATCCAGATGCCCTCTTCCGCTTTAAGTTTGGATaa                                                                                                                               <  2:105971/140‑1 (MQ=255)

               cccAGTTATAGATGTGAACGTCAGTCCCGCAGATGGCTGTTTTACGGATTTTAATCAGCAGATCGTTATGCCCGAGTTCCGGTACAGGAACGTCGGTCATCCAGATGCCCTCTTCCGCTTTAAGTTTGGATAACGCTTTc                                                                                                                        <  2:1594131/140‑1 (MQ=255)

               cccAGTTATAGATGTGAACGTCAGTCCCGCAGATGGCTGTTTTACGGATTTTAATCAGCAGATCGTTATGCCCGAGTTCCGGTACAGGAACGTCGGTCATCCAGATGCCCTCTTCCGCTTTAAGTTTGGATAACGCTTTc                                                                                                                        <  2:321989/140‑1 (MQ=255)

               cccAGTTATAGATGTGAACGTCAGTCCCGCAGATGGCTGTTTTACGGATTTTAATCAGCAGATCGTTATGCCCGAGTTCCGGTACAGGAACGTCGGTCATCCAGATGCCCTCTTCCGCTTTAAGTTTGGATAACGCTTTc                                                                                                                        <  2:451818/140‑1 (MQ=255)

               cccAGTTATAGATGTGAACGTCAGTCCCGCAGATGGCTGTTTTACGGATTTTAATCAGCAGATCGTTATGCCCGAGTTCCGGTACAGGAACGTCGGTCATCCAGATGCCCTCTTCCGCTTTAAGTTTGGATAACGCTTTc                                                                                                                        <  2:461500/140‑1 (MQ=255)

                  aGTTATAGATGTGAACGTCAGTCCCGCAGATGGCTGTTTTACGGATTTTAATCAGCAGATCGTTATGCCCGAGTTCCGGTACAGGAACGTCGGTCATCCAGATGCCCTCTTCCGCTTTAAGTTTGGATAACGCTTTCAtc                                                                                                                     >  2:232773/1‑140 (MQ=255)

                   gTTATAGATGTGAACGTCAGTCCCGCAGATGGCTGTTTTACGGATTTTAATCAGCAGATCGTTATGCCCGAGTTCCGGTACAGGAACGTCGGTCATCCAGATGCCCTCTTCCGCTTTAAGTTTGGATAACGCTTTCAtct                                                                                                                    >  2:1342691/1‑140 (MQ=255)

                    ttATAGATGTGAACGTCAGTCCCGCAGATGGCTGTTTTACGGATTTTAATCAGCAGATCGTTATGCCCGAGTTCCGGTACAGGAACGTCGGTCATCCAGATGCCCTCTTCCGCTTTAAGTTTGGATAACGCTTTCAtctc                                                                                                                   <  1:222978/140‑1 (MQ=255)

                        aGATGTGAACGTCAGTCCCGCAGATGGCTGTTTTACGGATTTTAATCAGCAGATCGTTATGCCCGAGTTCCGGTACAGGAACGTCGGTCATCCAGATGCCCTCTTCCGCTTTAAGTTTGGATAACGCTTTCATCTCACAt                                                                                                               <  1:1342691/140‑1 (MQ=255)

                         gATGTGAACGTCAGTCCCGCAGATGGCTGTTTTACGGATTTTAATCAGCAGATCGTTATGCCCGAGTTCCGGTACAGGAACGTCGGTCATCCAGATGCCCTCTTCCGCTTTAAGTTTGGATAACGCTTTCATCTCACATc                                                                                                              >  1:1502699/1‑140 (MQ=255)

                         gATGTGAACGTCAGTCCCGCAGATGGCTGTTTTACGGATTTTAATCAGCAGATCGTTATGCCCGAGTTCCGGTACAGGAACGTCGGTCATCCAGATGCCCTCTTCCGCTTTAAGTTTGGATAACGCTTTCATCTCACATc                                                                                                              >  2:2274886/1‑140 (MQ=255)

                            gtgAACGTCAGTCCCGCAGATGGCTGTTTTACGGATTTTAATCAGCAGATCGTTATGCCCGAGTTCCGGTACAGGAACGTCGGTCATCCAGATGCCCTCTTCCGCTTTAAGTTTGGATAACGCt                                                                                                                           >  1:1523233/1‑124 (MQ=255)

                            gtgAACGTCAGTCCCGCAGATGGCTGTTTTACGGATTTTAATCAGCAGATCGTTATGCCCGAGTTCCGGTACAGGAACGTCGGTCATCCAGATGCCCTCTTCCGCTTTAAGTTTGGATAACGCt                                                                                                                           <  2:1523233/124‑1 (MQ=255)

                            gtgAACGTCAGTCCCGCAGATGGCTGTTTTACGGATTTTAATCAGCAGATCGTTATGCCCGAGTTCCGGTACAGGAACGTCGGTCATCCAGATGCCCTCTTCCGCTTTAAGTTTGGATAACGCTTTCATCTCACATCCTc                                                                                                           >  2:584028/1‑140 (MQ=255)

                            gtgAACGTCAGTCCCGCAGATGGCTGTTTTACGGATTTTAATCAGCAGATCGTTATGCCCGAGTTCCGGTACAGGAACGTCGGTCATCCAGATGCCCTCTTCCGCTTTAAGTTTGGATAACGCTTTCATCTCACATCCTc                                                                                                           >  1:964549/1‑140 (MQ=255)

                            gtgAACGTCAGTCCCGCAGATGGCTGTTTTACGGATTTTAATCAGCAGATCGTTATGCCCGAGTTCCGGTACAGGAACGTCGGTCATCCAGATGCCCTCTTCCGCTTTAAGTTTGGATAACGCTTTCATCTCACATCCTc                                                                                                           >  1:2148629/1‑140 (MQ=255)

                            gtgAACGTCAGTCCCGCAGATGGCTGTTTTACGGATTTTAATCAGCAGATCGTTATGCCCGAGTTCCGGTACAGGAACGTCGGTCATCCAGATGCCCTCTTCCGCTTTAAGTTTGGATAACGCTTTCATCTCACATCCTc                                                                                                           >  1:2310190/1‑140 (MQ=255)

                            gtgAACGTCAGTCCCGCAGATGGCTGTTTTACGGATTTTAATCAGCAGATCGTTATGCCCGAGTTCCGGTACAGGAACGTCGGTCATCCAGATGCCCTCTTCCGCTTTAAGTTTGGATAACGCTTTCATCTCACATCCTc                                                                                                           >  2:1756717/1‑140 (MQ=255)

                             tgAACGTCAGTCCCGCAGATGGCTGTTTTACGGATTTTAATCAGCAGATCGTTATGCCCGAGTTCCGGTACAGGAACGTCGGTCATCCAGATGCCCTCTTCCGCTTTAAGTTTGGATAACGCTTTCATCTCACATCCTCa                                                                                                          >  2:264632/1‑140 (MQ=255)

                              gAACGTCAGTCCCGCAGATGGCTGTTTTACGGATTTTAATCAGCAGATCGTTATGCCCGAGTTCCGGTACAGGAACGTCGGTCATCCAGATGCCCTCTTCCGCTTTAAGTTTGGATAACGCTTTCATCTCACATCCTCAg                                                                                                         >  1:287406/1‑140 (MQ=255)

                               aaCGTCAGTCCCGCAGATGGCTGTTTTACGGATTTTAATCAGCAGATCGTTATGCCCGAGTTCCGGTACAGGAACGTCGGTCATCCAGATGCCCTCTTCCGCTTTAAGTTTGGATAACGCTTTCATCTCACATCCTCAgg                                                                                                        <  2:2549443/140‑1 (MQ=255)

                               aaCGTCAGTCCCGCAGATGGCTGTTTTACGGATTTTAATCAGCAGATCGTTATGCCCGAGTTCCGGTACAGGAACGTCGGTCATCCAGATGCCCTCTTCCGCTTTAAGTTTGGATAACGCTTTCATCTCACATCCTCAgg                                                                                                        >  1:774698/1‑140 (MQ=255)

                               aaCGTCAGTCCCGCAGATGGCTGTTTTACGGATTTTAATCAGCAGATCGTTATGCCCGAGTTCCGGTACAGGAACGTCGGTCATCCAGATGCCCTCTTCCGCTTTAAGTTTGGATAACGCTTTCATCTCACATCCTCAgg                                                                                                        >  2:2898552/1‑140 (MQ=255)

                               aaCGTCAGTCCCGCAGATGGCTGTTTTACGGATTTTAATCAGCAGATCGTTATGCCCGAGTTCCGGTACAGGAACGTCGGTCATCCAGATGCCCTCTTCCGCTTTAAGTTTGGATAACGCTTTCATCTCACATCCTCAgg                                                                                                        >  2:1291261/1‑140 (MQ=255)

                               aaCGTCAGTCCCGCAGATGGCTGTTTTACGGATTTTAATCAGCAGATCGTTATGCCCGAGTTCCGGTACAGGAACGTCGGTCATCCAGATGCCCTCTTCCGCTTTAAGTTTGGATAACGCTTTCATCTCACATCCTCAgg                                                                                                        >  1:1223147/1‑140 (MQ=255)

                               aaCGTCAGTCCCGCAGATGGCTGTTTTACGGATTTTAATCAGCAGATCGTTATGCCCGAGTTCCGGTACAGGAACGTCGGTCATCCAGATGCCCTCTTCCGCTTTAAGTTTGGATAACGCTTTCATCTCACATCCTCAgg                                                                                                        >  1:1031979/1‑140 (MQ=255)

                                  gTCAGTCCCGCAGATGGCTGTTTTACGGATTTTAATCAGCAGATCGTTATGCCCGAGTTCCGGTACAGGAACGTCGGTCATCCAGATGCCCTCTTCCGCTTTAAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGa                                                                                                     >  1:499988/1‑140 (MQ=255)

                                    cAGTCCCGCAGATGGCTGTTTTACGGATTTTAATCAGCAGATCGTTATGCCCGAGTTCCGGTACAGGAACGTCGGTCATCCAGATGGCCTCTTCCGCTTTAAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATa                                                                                                   >  2:760494/1‑140 (MQ=255)

                                    cAGTCCCGCAGATGGCTGTTTTACGGATTTTAATCAGCAGATCGTTATGCCCGAGTTCCGGTACAGGAACGTCGGTCATCCAGATGCCCTCTTCCGCTTTAAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATa                                                                                                   <  1:2552646/140‑1 (MQ=255)

                                    cAGTCCCGCAGATGGCTGTTTTACGGATTTTAATCAGCAGATCGTTATGCCCGAGTTCCAGTACAGGAACGTCGGTCATCCAGATGCCCTCTTCCGCTTTAAGTTTGGACAACGCTTTCATCTCACATCCTCAGGCGATa                                                                                                   >  2:2170091/1‑140 (MQ=255)

                                         ccGCAGATGGCTGTTTTACGGATTTTAATCAGCAGATCGTTATGCCCGAGTTCCGGTACAGGAACGTCGGTCATCCAGATGCCCTCTTCCGCTTTAAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACGcc                                                                                              <  1:1247195/140‑1 (MQ=255)

                                         ccGCAGATGGCTGTTTTACGGATTTTAATCAGCAGATCGTTATGCCCGAGTTCCGGTACAGGAACGTCGGTCATCCAGATGCCCTCTTCCGCTTTAAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACGcc                                                                                              <  1:2533232/140‑1 (MQ=255)

                                         ccGCAGATGGCTGTTTTACGGATTTTAATCAGCAGATCGTTATGCCCGAGTTCCGGTACAGGAACGTCGGTCATCCAGATGCCCTCTTCCGCTTTAAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACGcc                                                                                              <  2:117713/140‑1 (MQ=255)

                                          cGCAGATGGCTGTTTTACGGATTTTAATCAGCAGATCGTTATGCCCGAGTTCCGGTACAGGAACGTCGGTCATCCAGATGCCCTCTTCCGCTTTAAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACGccc                                                                                             <  1:264632/140‑1 (MQ=255)

                                            cAGATGGCTGTTTTACGGATTTTAATCAGCAGATCGTTATGCCCGAGTTCCGGTACAGGAACGTCGGTCATCCAGATGCCCTCTTCCGCTTTAAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACGCCCAg                                                                                           >  1:1015328/1‑140 (MQ=255)

                                            cAGATGGCTGTTTTACGGATTTTAATCAGCAGATCGTTATGCCCGAGTTCCGGTACAGGAACGTCGGTCATCCAGATGCCCTCTTCCGCTTTAAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACGCCCAg                                                                                           <  2:825211/140‑1 (MQ=255)

                                                 ggCTGTTTTACGGATTTTAATCAGCAGATCGTTATGCCCGAGTTCCGGTACAGGAACGTCGGTCATCCAGATGCCCTCTTCCGCTTTAAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACGCCCAgttgtt                                                                                      >  2:2826026/1‑140 (MQ=255)

                                                 ggCTGTTTTACGGATTTTAATCAGCAGATCGTTATGCCCGAGTTCCGGTACAGGAACGTCGGTCATCCAGATGCCCTCTTCCGCTTTAAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACGCCCAgttgtt                                                                                      >  1:2448806/1‑140 (MQ=255)

                                                 ggCTGTTTTACGGATTTTAATCAGCAGATCGTTATGCCCGAGTTCCGGTACAGGAACGTCGGTCATCCAGATGCCCTCTTCCGCTTTAAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACGCCCAgttgtt                                                                                      >  1:2114097/1‑140 (MQ=255)

                                                 ggCTGTTTTACGGATTTTAATCAGCAGATCGTTATGCCCGAGTTCCGGTACAGGAACGTCGGTCATCCAGATGCCCTCTTCCGCTTTAAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACGCCCAgttgtt                                                                                      >  1:1847599/1‑140 (MQ=255)

                                                        ttACGGATTTTAATCAGCAGATCGTTATGCCCGAGTTCCGGTACAGGAACGTCGGTCATCCAGATGCCCTCTTCCGCTTTAAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACGCCCAGTTGTTTACCAAt                                                                               <  2:1243805/140‑1 (MQ=255)

                                                         tACGGATTTTAATCAGCAGATCGTTATGCCCGAGTTCCGGTACAGGAACGTCGGTCATCCAGATGCCCTCTTCCGCTTTAAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACGCCCAGTTGTTTACCAATa                                                                              <  2:2078138/140‑1 (MQ=255)

                                                            ggATTTTAATCAGCAGATCGTTATGCCCGAGTTCCGGTACAGGAACGTCGGTCATCCAGATGCCCTCTTCCGCTTTAAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACGCCCAGTTGTTTACCAATAcgc                                                                           >  1:96134/1‑140 (MQ=255)

                                                               ttttAATCAGCAGATCGTTATGCCCGAGTTCCGGTACAGGAACGTCGGTCATCCAGATGCCCTCTTCCGCTTTAAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACGCCCAGTTGTTTACCAATACGCGTa                                                                        <  2:689097/140‑1 (MQ=255)

                                                               ttttAATCAGCAGATCGTTATGCCCGAGTTCCGGTACAGGAACGTCGGTCATCCAGATGCCCTCTTCCGCTTTAAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACGCCCAGTTGTTTACCAATACGCGTa                                                                        <  1:993499/140‑1 (MQ=255)

                                                               ttttAATCAGCAGATCGTTATGCCCGAGTTCCGGTACAGGAACGTCGGTCATCCAGATGCCCTCTTCCGCTTTAAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACGCCCAGTTGTTTACCAATACGCGTa                                                                        <  1:296139/140‑1 (MQ=255)

                                                               ttttAATCAGCAGATCGTTATGCCCGAGTTCCGGTACAGGAACGTCGGTCATCCAGATGCCCTCTTCCGCTTTAAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACGCCCAGTTGTTTACCAATACGCGTa                                                                        <  1:2826026/140‑1 (MQ=255)

                                                                 ttAATCAGCAGATCGTTATGCCCGAGTTCCGGTACAGGAACGTCGGTCATCCAGATGCCCTCTTCCGCTTTAAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACGCCCAGTTGTTTACCAATACGCGTaaa                                                                      <  2:964549/140‑1 (MQ=255)

                                                                 ttAATCAGCAGATCGTTATGCCCGAGTTCCGGTACAGGAACGTCGGTCATCCAGATGCCCTCTTCCGCTTTAAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACGCCCAGTTGTTTACCAATACGCGTaaa                                                                      <  2:1145920/140‑1 (MQ=255)

                                                                       agcagATCGTTATGCCCGAGTTCCGGTACAGGAACGTCGGTCATCCAGATGCCCTCTTCCGCTTTAAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACGCCCAGTTGTTTACCAATACGCGTAAATGCTTc                                                                <  1:232773/140‑1 (MQ=255)

                                                                         cagATCGTTATGCCCGAGTTCCGGTACAGGAACGTCGGTCATCCAGATGCCCTCTTCCGCTTTAAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACGCCCAGTTGTTTACCAATACGCGTAAATGCTTCTa                                                              >  2:701050/1‑140 (MQ=255)

                                                                              cGTTATGCCCGAGTTCCGGTACAGGAACGTCGGTCATCCAGATGCCCTCTTCCGCTTTAAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACGCCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCa                                                         >  2:2155759/1‑140 (MQ=255)

                                                                                 tATGCCCGAGTTCCGGTACAGGAACGTCGGTCATCCAGATGCCCTCTTCCGCTTTAAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACGCCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCAcgc                                                      <  2:1968146/140‑1 (MQ=255)

                                                                                   tGCCCGAGTTCCGGTACAGGAACGTCGGTCATCCAGATGCCCTCTTCCGCTTTAAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACGCCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTg                                                           >  2:2387022/1‑133 (MQ=255)

                                                                                   tGCCCGAGTTCCGGTACAGGAACGTCGGTCATCCAGATGCCCTCTTCCGCTTTAAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACGCCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGt                                                    >  1:1412119/1‑140 (MQ=255)

                                                                                      ccGAGTTCCGGTACAGGAACGTCGGTCATCCAGATGCCCTCTTCCGCTTTAAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACGCCCAGTTGTTTCCCAATACGCGTAAATGCTTCTACTGCACGCGTAAt                                                 <  1:572393/140‑1 (MQ=255)

                                                                                      ccGAGTTCCGGTACAGGAACGTCGGTCATCCAGATGCCCTCTTCCGCTTTAAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACGCCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAAt                                                 <  1:1291261/140‑1 (MQ=255)

                                                                                      ccGAGTTCCGGTACAGGAACGTCGGTCATCCAGATGCCCTCTTCCGCTTTAAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACGCCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAAt                                                 <  2:1189867/140‑1 (MQ=255)

                                                                                      ccGAGTTCCGGTACAGGAACGTCGGTCATCCAGATGCCCTCTTCCGCTTTAAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACGCCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAAt                                                 >  2:639703/1‑140 (MQ=255)

                                                                                      ccGAGTTCCGGTACAGGAACGTCGGTCATCCAGATGCCCTCTTCCGCTTTAAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACGCCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAAt                                                 <  1:1877027/140‑1 (MQ=255)

                                                                                      ccGAGTTCCGGTACAGGAACGTCGGTCATCCAGATGCCCTCTTCCGCTTTAAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACGCCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAAt                                                 <  1:701050/140‑1 (MQ=255)

                                                                                        gAGTTCCGGTACAGGAACGTCGGTCATCCAGATGCCCTCTTCCGCTTTAAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACGCCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCAc                                                        <  1:55978/131‑1 (MQ=255)

                                                                                        gAGTTCCGGTACAGGAACGTCGGTCATCCAGATGCCCTCTTCCGCTTTAAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACGCCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCAc                                                        >  2:55978/1‑131 (MQ=255)

                                                                                        gAGTTCCGGTACAGGAACGTCGGTCATCCAGATGCCCTCTTCCGCTTTAAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACGCCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAAttt                                               >  1:585438/1‑140 (MQ=255)

                                                                                        gAGTTCCGGTACAGGAACGTCGGTCATCCAGATGCCCTCTTCCGCTTTAAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACGCCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAAttt                                               >  1:1453255/1‑140 (MQ=255)

                                                                                        gAGTTCCGGTACAGGAACGTCGGTCATCCAGATGCCCTCTTCCGCTTTAAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACGCCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAAttt                                               >  1:2890766/1‑140 (MQ=255)

                                                                                         aGTTCCGGTACAGGAACGTCGGTCATCCAGATGCCCTCTTCCGCTTTAAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACGCCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTTg                                              >  2:2372670/1‑140 (MQ=255)

                                                                                         aGTTCCGGTACAGGAACGTCGGTCATCCAGATGCCCTCTTCCGCTTTAAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACGCCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTTg                                              >  2:1650925/1‑140 (MQ=255)

                                                                                          gTTCCGGTACAGGAACGTCGGTCATCCAGATGCCCTCTTCCGCTTTAAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACGCCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTTGc                                             <  1:1650925/140‑1 (MQ=255)

                                                                                           ttCCGGTACAGGAACGTCGGTCATCCAGATGCCCTCTTCCGCTTTAAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACGCCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTTGCt                                            <  1:2672268/140‑1 (MQ=255)

                                                                                           ttCCGGTACAGGAACGTCGGTCATCCAGATGCCCTCTTCCGCTTTAAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACGCCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTTGCt                                            <  2:2448806/140‑1 (MQ=255)

                                                                                             ccGGTACAGGAACGTCGGTCATCCAGATGCCCTCTTCCGCTTTAAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACGCCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTTGCTCa                                          >  2:110361/1‑140 (MQ=255)

                                                                                                       aaCGTCGGTCATCCAGATGCCCTCTTCCGCTTTAAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACGCCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTTGCTCAGGGGTATgcg                                <  1:525718/140‑1 (MQ=255)

                                                                                                        aCGTCGGTCATCCAGATGCCCTCTTCCGCTTTAAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACGCCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTTGCTCAGGGGTATgcgc                               >  2:2715089/1‑140 (MQ=255)

                                                                                                         cGTCGGTCATCCAGATGCCCTCTTCCGCTTTAAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACGCCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTTGCTCAGGGGTATGcgcc                              >  2:2532158/1‑140 (MQ=255)

                                                                                                           tCGGTCATCCAGATGCCCTCTTCCGCTTTAAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACGCCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTTGCTCAGGGGTATg                                  >  1:2051253/1‑134 (MQ=255)

                                                                                                           tCGGTCATCCAGATGCCCTCTTCCGCTTTAAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACGCCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTTGCTCAGGGGTATg                                  <  2:2051253/134‑1 (MQ=255)

                                                                                                           tCGGTCATCCAGATGCCCTCTTCCGCTTTAAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACGCCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTTGCTCAGGGGTATGcgccgc                            >  2:2560659/1‑140 (MQ=255)

                                                                                                           tCGGTCATCCAGATGCCCTCTTCCGCTTTAAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACGCCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTTGCTCAGGGGTATGcgccgc                            <  2:1412119/140‑1 (MQ=255)

                                                                                                            cGGTCATCCAGATGCCCTCTTCCGCTTTAAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACGCCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTTGCTCAGGGGTATGCGCCGCa                           <  2:499988/140‑1 (MQ=255)

                                                                                                              gTCATCCAGATGCCCTCTTCCGCTTTAAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACGCCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTTGCTCAGGGGTATGCGCCGCAGa                         >  2:200599/1‑140 (MQ=255)

                                                                                                                 aTCCAGATGCCCTCTTCCGCTTTAAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACGCCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTTGCTCAGGGGTATGCGCCGCAGACAt                      <  1:200599/140‑1 (MQ=255)

                                                                                                                  tCCAGATGCCCTCTTCCGCTTTAAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACGCCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTTGCTCAGGGGTATGCGCCGCAGACAt                      >  1:455957/1‑139 (MQ=255)

                                                                                                                   ccAGATGCCCTCTTCCGCTTTAAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACGCCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTTGCTCAGGGGTATGCGCCGCAGACATCt                    <  2:368598/140‑1 (MQ=255)

                                                                                                                    cAGATGCCCTCTTCCGCTTTAAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACGCTCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTTTCTCAGGGGTATGCGCCGCAGACATCTg                   <  2:2114097/140‑1 (MQ=255)

                                                                                                                            ctctTCCGCTTTAAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACGCCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTTGCTCAGGGGTATGCGCCGCAGACATCTGGGTACGaa           >  2:363525/1‑140 (MQ=255)

                                                                                                                            ctctTCCGCTTTAAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACGCCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTTGCTCAGGGGTATGCGCCGCAGACATCTGGGTACGaa           >  1:629642/1‑140 (MQ=255)

                                                                                                                            ctctTCCGCTTTAAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACGCCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTTGCTCAGGGGTATGCGCCGCAGACATCTGGGTACGaa           >  2:2460931/1‑140 (MQ=255)

                                                                                                                              ctTCCGCTTTAAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACGCCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTTGCTCAGGGGTATGCGCCGCAGACATCTGGGTACGAATa         >  2:2530406/1‑140 (MQ=255)

                                                                                                                              ctTCCGCTTTAAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACGCCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTTGCTCAGGGGTATGCGCCGCAGACATCTGGGTACGAATa         <  2:2419657/140‑1 (MQ=255)

                                                                                                                                   gCTTTAAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACGCCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTTGCTCAGGGGTATGCGCCGCAGACATCTGGGTACGAATACgcgc    >  1:2404534/1‑140 (MQ=255)

                                                                                                                                    cTTTAAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACGCCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTTGCTCAGGGGTATGCGCCGCAGACATCTCGGTACGAATACGCGcc   <  2:1864197/140‑1 (MQ=255)

                                                                                                                                     tttAAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACGCCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTTGCTCAGGGGTATGCGCCGCAGACATCTGGGTACGAATACGCGCCt  <  1:1756717/140‑1 (MQ=255)

TTTGCGACCACTCATCCCAGTTATAGATGTGAACGTCAGTCCCGCAGATGGCTGTTTTACGGATTTTAATCAGCAGATCGTTATGCCCGAGTTCCGGTACAGGAACGTCGGTCATCCAGATGCCCTCTTCCGCTTTCAGTTTGGATAACGCTTTCATCTCACATCCTCAGGCGATAACGCCCAGTTGTTTACCAATACGCGTAAATGCTTCTACTGCACGCGTAATTTGCTCAGGGGTATGCGCCGCAGACATCTGGGTACGAATACGCGCCT  >  NC_000913/3791189‑3791461

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`