| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,089,912 | C→A | R793I (AGA→ATA) | pgaA ← | partially deacetylated poly‑beta‑1,6‑N‑acetyl‑D‑glucosamine outer membrane porin |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,089,912 | 0 | C | A | 99.5% | 730.7 / ‑3.9 | 206 | R793I (AGA→ATA) | pgaA | partially deacetylated poly‑beta‑1,6‑N‑acetyl‑D‑glucosamine outer membrane porin |
| Reads supporting (aligned to +/- strand): ref base C (1/0); new base A (126/79); total (127/79) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 206 total aligned reads displayed.
TGTTCTTGACTGGCTAATGCACGCGGTGAGCATAATTATACTCACCAGCATCAGGAGATATTTATTTCCATTACGTAACATATTTATCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGTGTTCTCTGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCATCAATCACGTCATTCCAACTAATGCGTTGCCCGTAGCCGAGTTGGGTGACGACATCCGTGCCATAATGTTTTTGCCAGGAGGCACCAA > NC_000913/1089777‑1090047 | gTTCTTGACTGGCTAATGCACGCGGTGAGCATAATTATACTCACCAGCATCAGGAGATATTTATTTCCATTACGTAACATATTTATCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGTGTTCTATGt > 1:1185537/1‑138 (MQ=255) gTTCTTGACTGGCTAATGCACGCGGTGAGCATAATTATACTCACCAGCATCAGGAGATATTTATTTCCATTACGTAACATATTTATCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGTGTTCTATGTCa < 2:209074/140‑1 (MQ=255) gTTCTTGACTGGCTAATGCACGCGGTGAGCATAATTATACTCACCAGCATCAGGAGATATTTATTTCCATTACGTAACATATTTATCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGTGTTCTATGTCa > 2:887550/1‑140 (MQ=255) ttCTTGACTGGCTAATGCACGCGGTGAGCATAATTATACTCACCAGCATCAGGAGATATTTATTTCCATTACGTAACATATTTATCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGTGTTCTATGTCAc < 1:195179/140‑1 (MQ=255) gACTGGCTAATGCACGCGGTGAGCATAATTATACTCACCAGCATCAGGAGATATTTATTTCCATTACGTAACATATTTATCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGTGTTCTATGTCACCGTCa > 1:1583429/1‑140 (MQ=255) tGGCTAATGCACGCGGTGAGCATAATTATACTCACCAGCATCAGGAGATATTTATTTCCATTACGTAACATATTTATCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGTGTTCTATGTCACCGTCATaa > 2:2885776/1‑140 (MQ=255) gCTAATGCACGCGGTGAGCATAATTATACTCACCAGCATCAGGAGATATTTATTTCCATTACGTAACATATTTATCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGTGTTCTATGTCACCGTCATAAgg > 2:645201/1‑140 (MQ=255) gcgGTGAGCATAATTATACTCACCAGCATCAGGAGATATTTATTTCCATTACGTAACATATTTATCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGTGTTCTATGTCACCGTCATAAGGTCGTTTTTcc < 1:2381115/140‑1 (MQ=255) gcgGTGAGCATAATTATACTCACCAGCATCAGGAGATATTTATTTCCATTACGTAACATATTTATCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGTGTTCTATGTCACCGTCATAAGGTCGTTTTTcc > 2:2298907/1‑140 (MQ=255) gcgGTGAGCATAATTATACTCACCAGCATCAGGAGATATTTATTTCCATTACGTAACATATTTATCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGTGTTCTATGTCACCGTCATAAGGTCGTTTTTcc > 1:2830022/1‑140 (MQ=255) gcgGTGAGCATAATTATACTCACCAGCATCAGGAGATATTTATTTCCATTACGTAACATATTTATCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGTGTTCTATGTCACCGTCATAAGGTCGTTTTTcc < 1:2897695/140‑1 (MQ=255) gcgGTGAGCATAATTATACTCACCAGCATCAGGAGATATTTATTTCCATTACGTAACATATTTATCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGTGTTCTATGTCACCGTCATAAGGTCGTTTTTcc < 1:887550/140‑1 (MQ=255) gcgGTGAGCATAATTATACTCACCAGCATCAGGAGATATTTATTTCCATTACGTAACATATTTATCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGTGTTCTATGTCACCGTCATAAGGTCGTTTTTcc > 2:357210/1‑140 (MQ=255) gcgGTGAGCATAATTATACTCACCAGCATCAGGAGATATTTATTTCCATTACGTAACATATTTATCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGTGTTCTATGTCACCGTCATAAGGTCGTTTTTcc < 1:1432301/140‑1 (MQ=255) gcgGTGAGCATAATTATACTCACCAGCATCAGGAGATATTTATTTCCATTACGTAACATATTTATCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGTGTTCTATGTCACCGTCATAAGGTCGTTTTTcc > 2:111880/1‑140 (MQ=255) cgGTGAGCATAATTATACTCACCAGCATCAGGAGATATTTATTTCCATTACGTAACATATTTATCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGTGTTCTATGTCACCGTCATAAGGTCGTTTTTccc > 2:2941258/1‑140 (MQ=255) cATAATTATACTCACCAGCATCAGGAGATATTTATTTCCATTACGTAACATATTTATCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGTGTTCTATGTCACCGTCATAAGGTCGTTTTTCCCagcgtag > 1:518920/1‑140 (MQ=255) aaTTATACTCACCAGCATCAGGAGATATTTATTTCCATTACGTAACATATTTATCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGTGTTCTATGTCACCGTCATAAGGTCGTTTTTCCCagcgtagcgt < 2:1583429/140‑1 (MQ=255) ataCTCACCAGCATCAGGAGATATTTATTTCCATTACGTAACATATTTATCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGTGTTCTATGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTgcg < 1:473130/140‑1 (MQ=255) taCTCACCAGCATCAGGAGATATTTATTTCCATTACGTAACATATTTATCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGTGTTCTATGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTgcgc > 2:103548/1‑140 (MQ=255) taCTCACCAGCATCAGGAGATATTTATTTCCATTACGTAACATATTTATCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGTGTTCTATGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTgcgc < 2:2264217/140‑1 (MQ=255) cTCACCAGCATCAGGAGATATTTATTTCCATTACGTAACATATTTATCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGTGTTCTATGTCACCGTCATAAGGTCGTTTTTCCCagcgt < 2:1381343/128‑1 (MQ=255) cTCACCAGCATCAGGAGATATTTATTTCCATTACGTAACATATTTATCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGTGTTCTATGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCa > 1:2537894/1‑140 (MQ=255) cTCACCAGCATCAGGAGATATTTATTTCCATTACGTAACATATTTATCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGTGTTCTATGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCa > 2:2360360/1‑140 (MQ=255) cTCACCAGCATCAGGAGATATTTATTTCCATTACGTAACATATTTATCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGTGTTCTATGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCa > 1:2469955/1‑140 (MQ=255) aCCAGCATCAGGAGATATTTATTTCCATTACGTAACATATTTATCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGTGTTCTATGTCACCGTCATAAGGTCGTTTTTCCCagcgtagcgt > 1:1855223/1‑130 (MQ=255) aCCAGCATCAGGAGATATTTATTTCCATTACGTAACATATTTATCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGTGTTCTATGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTgcg < 1:230196/134‑1 (MQ=255) aCCAGCATCAGGAGATATTTATTTCCATTACGTAACATATTTATCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGTGTTCTATGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGc > 1:2128598/1‑139 (MQ=255) aCCAGCATCAGGAGATATTTATTTCCATTACGTAACATATTTATCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGTGTTCTATGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGc > 1:247924/1‑139 (MQ=255) aCCAGCATCAGGAGATATTTATTTCCATTACGTAACATATTTATCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGTGTTCTATGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCa < 1:2273259/140‑1 (MQ=255) aCCAGCATCAGGAGATATTTATTTCCATTACGTAACATATTTATCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGTGTTCTATGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCa > 1:721933/1‑140 (MQ=255) aCCAGCATCAGGAGATATTTATTTCCATTACGTAACATATTTATCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGTGTTCTATGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCa > 2:407739/1‑140 (MQ=255) aCCAGCATCAGGAGATATTTATTTCCATTACGTAACATATTTATCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGTGTTCTATGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCa > 1:1560768/1‑140 (MQ=255) aCCAGCATCAGGAGATATTTATTTCCATTACGTAACATATTTATCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGTGTTCTATGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCa > 1:350976/1‑140 (MQ=255) aCCAGCATCAGGAGATATTTATTTCCATTACGTAACATATTTATCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGTGTTCTATGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCa > 2:1252471/1‑140 (MQ=255) aCCAGCATCAGGAGATATTTATTTCCATTACGTAACATATTTATCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGTGTTCTATGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCa > 1:2747944/1‑140 (MQ=255) aCCAGCATCAGGAGATATTTATTTCCATTACGTAACATATTTATCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGTGTTCTATGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCa > 1:1110707/1‑140 (MQ=255) aCCAGCATCAGGAGATATTTATTTCCATTACGTAACATATTTATCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGTGTTCTATGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCa > 1:2213780/1‑140 (MQ=255) cAGCATCAGGAGATATTTATTTCCATTACGTAACATATTTATCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGTGTTCTATGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCatc > 2:1768462/1‑140 (MQ=255) cAGCATCAGGAGATATTTATTTCCATTACGTAACATATTTATCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGTGTTCTATGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCatc > 1:1447163/1‑140 (MQ=255) cATCAGGAGATATTTATTTCCATTACGTAACATATTTATCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGTGTTCTATGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCatcaat < 1:645201/140‑1 (MQ=255) aGGAGATATTTATTTCCATTACGTAACATATTTATCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGTGTTCTATGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCATCAATCACg < 1:264252/140‑1 (MQ=255) aGGAGATATTTATTTCCATTACGTAACATATTTATCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGTGTTCTATGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCATCAATCACg < 2:2213780/140‑1 (MQ=255) aGGAGATATTTATTTCCATTACGTAACATATTTATCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGTGTTCTATGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCATCAATCACg < 1:533408/140‑1 (MQ=255) ggAGATATTTATTTCCATTACGTAACATATTTATCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGTGTTCTATGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCatcaat > 1:2428276/1‑135 (MQ=255) ggAGATATTTATTTCCATTACGTAACATATTTATCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGTGTTCTATGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCATCAATCACGt > 2:2450702/1‑140 (MQ=255) ggAGATATTTATTTCCATTACGTAACATATTTATCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGTGTTCTATGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCATCAATCACGt > 1:364328/1‑140 (MQ=255) agaTATTTATTTCCATTACGTAACATATTTATCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGTGTTCTATGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCATCAATCACGTCa > 2:1564099/1‑140 (MQ=255) atatTTATTTCCATTACGTAACATATTTATCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGTGTTCTATGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCATCAATCACGTCAtt < 1:1624724/140‑1 (MQ=255) tatttattTCCATTACGTAACATATTTATCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGTGTTCTATGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCATCAATCACGTCATTc > 1:375095/1‑140 (MQ=255) atttatttCCATTACGTAACATATTTATCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGTGTTCTATGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCATCAATCACGTCATTcc < 2:940527/140‑1 (MQ=255) atttatttCCATTACGTAACATATTTATCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGTGTTCTATGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCATCAATCACGTCATTcc > 2:1922009/1‑140 (MQ=255) aTTACGTAACATATTTATCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGTGTTCTATGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCATCAATCACGTCATTCCAACTAATGCg < 2:2475293/140‑1 (MQ=255) ttACGTAACATATTTATCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGTGTTCTATGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCATCAATCACg > 1:1506192/1‑122 (MQ=255) ttACGTAACATATTTATCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGTGTTCTATGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCATCAATCACGTCATTCCAACTAATGCGt > 2:341650/1‑140 (MQ=255) ttACGTAACATATTTATCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGTGTTCTATGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCATCAATCACGTCATTCCAACTAATGCGt > 1:107873/1‑140 (MQ=255) ttACGTAACATATTTATCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGTGTTCTATGTCACCGTCATAAGGTCGTTTTT‑CCAGCGTAACGTTGCGCCAGCATCAATCACGTCATTCCAACTAATGCGtt > 2:1518716/1‑140 (MQ=255) tatTTATCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGTGTTCTATGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCATCAATCACGTCATTCCAACTAATGCATTGCCCGTAGc < 2:518920/140‑1 (MQ=255) ttATCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGTGTTCTATGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCATCAATCACGTCATTCCAACTAATGCGTTGCCCGTAGCCGa > 2:1277350/1‑140 (MQ=255) ttATCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGTGTTCTATGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCATCAATCACGTCATTCCAACTAATGCGTTGCCCGTAGCCGa > 2:1318797/1‑140 (MQ=255) aTCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGTGTTCTATGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCATCAATCACGTCATTCCAACTAATGCGTTGCCCGTAGCCGAGt > 2:2758302/1‑140 (MQ=255) tCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGTGTTCTATGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCATCAATCACGTCATTCCAACTAATGCGTTGCCCGTAGCCGAGtt > 2:781635/1‑140 (MQ=255) cTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGTGTTCTATGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCATCAATCACGTCATTCCAACTAATGCGtt > 2:1502423/1‑123 (MQ=255) cTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGTGTTCTATGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCATCAATCACGTCATTCCAACTAATGCGTTGCCCGTAGCCGAGTTgg > 1:962638/1‑140 (MQ=255) cTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGTGTTCTATGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCATCAATCACGTCATTCCAACTAATGCGTTGCCCGTAGCCGAGTTgg < 1:2450702/140‑1 (MQ=255) cTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGTGTTCTATGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCATCAATCACGTCATTCCAACTAATGCGTTGCCCGTAGCCGAGTTgg > 2:186902/1‑140 (MQ=255) ttAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGTGTTCTATGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCATCAATCACGTCATTCCAACTAATGCGTTGCCCGTAGCCGAGTTggg > 2:1101384/1‑140 (MQ=255) tAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGTGTTCTATGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCATCAATCACGTCATTCCAACTAATGCGTTGCCCGTAGCCGAGTTGGGt > 1:1438103/1‑140 (MQ=255) aaaaTCTGAATGTCATATCGAATTCAACGTATAAGTTGTGTTCTATGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCATCAATCACGTCATTCCAACTAATGCGTTGCCCGTAGCCGAGTTGGGTg > 2:2561109/1‑140 (MQ=255) aTCTGAATGTCATATCGAATTCAACGTATAAGTTGTGTTCTATGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCATCAATCACGTCATTCCAACTAATGCGTTGCCCGTAGCCGAGTTGGGTgacg < 2:374402/140‑1 (MQ=255) cTGAATGTCATATCGAATTCAACGTATAAGTTGTGTTCTATGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCATCAATCACGTCATTCCAACTAATGCGTTGCCCGTAGCCGAGTTGGGTgacgac > 1:1501960/1‑140 (MQ=255) tGAATGTCATATCGAATTCAACGTATAAGTTGTGTTCTCTGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCATCAATCACGTCATTCCAACTAATGCGTTGCCCGTAGCCGAGTTGGGTGACGACa > 1:1840948/1‑140 (MQ=255) tGAATGTCATATCGAATTCAACGTATAAGTTGTGTTCTATGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCATCAATCACGTCATTCCAACTAATGCGTTGCCCGTAGCCGAGTTGGGTGACGACa > 2:800117/1‑140 (MQ=255) aaTGTCATATCGAATTCAACGTATAAGTTGTGTTCTATGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCATCAATCACGTCATTCCAACTAATGCGTTGCCCGTAGCCGAGTTGGGTGACGACATc > 2:2013136/1‑140 (MQ=255) tGTCATATCGAATTCAACGTATAAGTTGTGTTCTATGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCATCAATCACGTCATTCCAACTAATGCGTTGCCCGTAGCCGAGTTGGGTGACGACATCCg < 2:2438191/140‑1 (MQ=255) tatCGAATTCAACGTATAAGTTGTGTTCTATGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCATCAATCACGTCATTCCAACTAATGCGTTGCCCGTAGCCGAGTTGGGTGACGACATCCGTGCCa > 1:1886266/1‑140 (MQ=255) tCGAATTCAACGTATAAGTTGTGTTCTATGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCATCAATCACGTCATTCCAACTAATGCGTTGCCCGTAGCCGAGTTGGGTGACGACATCCGTGCCATa < 1:1252471/140‑1 (MQ=255) tCGAATTCAACGTATAAGTTGTGTTCTATGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCATCAATCACGTCATTCCAACTAATGCGTTGCCCGTAGCCGAGTTGGGTGACGACATCCGTGCCATa < 2:2175294/140‑1 (MQ=255) tCGAATTCAACGTATAAGTTGTGTTCTATGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCATCAATCACGTCATTCCAACTAATGCGTTGCCCGTAGCCGAGTTGGGTGACGACATCCGTGCCATa < 1:2561109/140‑1 (MQ=255) cGAATTCAACGTATAAGTTGTGTTCTATGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCATCAATCACGTCATTCCAACTAATGCGTTGCCCGTAGCCGAGTTGGGTGACGACATCCg > 2:1710444/1‑132 (MQ=255) aaTTCAACGTATAAGTTGTGTTCTATGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCATCAATCACGTCATTCCAACTAATGCGTTGCCCGTAGCCGAGTTGGGTGACGACATCCGTGCCATAATg > 1:1720130/1‑140 (MQ=255) aTTCAACGTATAAGTTGTGTTCTATGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCATCAATCACGTCATTCCAACTAATGCGTTGCCCGTAGCCGAGTTGGGTGACGACATCCGTGCCATAATGt > 2:709316/1‑140 (MQ=255) ttCAACGTATAAGTTGTGTTCTATGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCATCAATCACGTCATTCCAACTAATGCGTTGCCCGTAGCCGAGTTGGGTGACGACAt < 1:1690086/125‑1 (MQ=255) ttCAACGTATAAGTTGTGTTCTATGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCATCAATCACGTCATTCCAACTAATGCGTTGCCCGTAGCCGAGTTGGGTGACGACATCCGTGCCATAATGtt > 1:2066279/1‑140 (MQ=255) ttCAACGTATAAGTTGTGTTCTATGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCATCAATCACGTCATTCCAACTAATGCGTTGCCCGTAGCCGAGTTGGGTGACGACATCCGTGCCATAATGtt > 2:1425321/1‑140 (MQ=255) ttCAACGTATAAGTTGTGTTCTATGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCATCAATCACGTCATTCCAACTAATGCGTTGCCCGTAGCCGAGTTGGGTGACGACATCCGTGCCATAATGtt > 2:584564/1‑140 (MQ=255) ttCAACGTATAAGTTGTGTTCTATGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCATCAATCACGTCATTCCAACTAATGCGTTGCCCGTAGCCGAGTTGGGTGACGACATCCGTGCCATAATGtt < 1:811275/140‑1 (MQ=255) cGTATAAGTTGTGTTCTATGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCATCAATC‑CGTCATTCCAACTAATGCGTTGCCCGTAGCCGAGTTGGGTGACGACATCCGTGCCATAATGTTTTTGcc > 2:143829/1‑140 (MQ=255) taAGTTGTGTTCTATGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCATCAATCACGTCATTCCAACTAATGCGTTGCCCGTAGCCGAGTTGGGTGACGACATCCGTGCCATAATGTTTTTGCCagg > 1:1993906/1‑140 (MQ=255) taAGTTGTGTTCTATGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCATCAATCACGTCATTCCAACTAATGCGTTGCCCGTAGCCGAGTTGGGTGACGACATCCGTGCCATAATGTTTTTGCCagg < 1:1332835/140‑1 (MQ=255) aGTTGTGTTCTATGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCATCAATCACGTCATTCCAACTAATGCGTTGCCCGTAGCCGAGTTGGGTGACGACATCCGTGCCATAATGTTTTTGCCaggag > 1:2178053/1‑140 (MQ=255) gtgtTCTATGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCATCAATCACGTCATTCCAACTAATGCGTTGCCCGTAGCCGAGTTGGGTGACGACATCCGTGCCATAATGTTTTTGCCAGGAGGCAc > 2:2831422/1‑140 (MQ=255) tgtTCTATGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCATCAATCACGTCATTCCAACTAATGCGTTGCCCGTAGCCGAGTTGGGTGACGACATCCGTGCCATAATGTTTTTGCCAGGAGGCAcc > 1:931544/1‑140 (MQ=255) gtTCTATGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCATCAATCACGTCATTCCAACTAATGCGTTGCCCGTAGCCGAGTTGGGTGACGACATCCGTGCCATAATGTTTTTGCCaggag < 2:2797385/134‑1 (MQ=255) gtTCTATGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCATCAATCACGTCATTCCAACTAATGCGTTGCCCGTAGCCGAGTTGGGTGACGACATCCGTGCCATAATGTTTTTGCCaggag > 1:2797385/1‑134 (MQ=255) gtTCTATGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCATCAATCACGTCATTCCAACTAATGCGTTGCCCGTAGCCGAGTTGGGTGACGACATCCGTGCCATAATGTTTTTGCCAGGAGGCACCa > 1:1314923/1‑140 (MQ=255) ttCTATGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCATCAATCACGTCATTCCAACTAATGCGTTGCCCGTAGCCGAGTTGGGTGACGACATCCGTGCCATAATGTTTTTGCCaggagg > 1:1070915/1‑134 (MQ=255) ttCTATGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCATCAATCACGTCATTCCAACTAATGCGTTGCCCGTAGCCGAGTTGGGTGACGACATCCGTGCCATAATGTTTTTGCCAGGAGGCACCaa > 1:688465/1‑140 (MQ=255) ttCTATGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCATCAATCACGTCATTCCAACTAATGCGTTGCCCGTAGCCGAGTTGGGTGACGACATCCGTGCCATAATGTTTTTGCCAGGAGGCACCaa > 2:2924421/1‑140 (MQ=255) ttCTATGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCATCAATCACGTCATTCCAACTAATGCGTTGCCCGTAGCCGAGTTGGGTGACGACATCCGTGCCATAATGTTTTTGCCAGGAGGCACCaa > 1:1971306/1‑140 (MQ=255) | TGTTCTTGACTGGCTAATGCACGCGGTGAGCATAATTATACTCACCAGCATCAGGAGATATTTATTTCCATTACGTAACATATTTATCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGTGTTCTCTGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCATCAATCACGTCATTCCAACTAATGCGTTGCCCGTAGCCGAGTTGGGTGACGACATCCGTGCCATAATGTTTTTGCCAGGAGGCACCAA > NC_000913/1089777‑1090047 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |