| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,184,476 | (A)7→8 | intergenic (‑10/‑364) | ribB ← / → ubiK | 3,4‑dihydroxy‑2‑butanone‑4‑phosphate synthase/ubiquinone biosynthesis accessory factor UbiK |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,184,469 | 1 | . | A | 99.0% | 339.3 / ‑3.6 | 95 | intergenic (‑3/‑371) | ribB/ubiK | 3,4‑dihydroxy‑2‑butanone‑4‑phosphate synthase/ubiquinone biosynthesis accessory factor UbiK |
| Reads supporting (aligned to +/- strand): ref base . (0/1); new base A (52/42); total (52/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.53e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 | |||||||||||
CATATCACCTTCGTTTTCACGGTCTTCATCATCAAGCACCATTACACCGCGTCCTTCACGCAGCGCAGCCAGTGCATTTTCAACACGTTCGAAAGGCGTACCAAAAGAGGAAAGTAGCGTCTGATTCATGGT‑‑AAAAAAACCTCACTAAAATTATGGTTACCAGAATCAGGGCAGTCTTAGGAGTGGCGGCATATAGCCAAAATAACGTGAGCGGGTCCATGCCCGACAGAATCGTTACTCTCTCCCATCCGGACTCTAACCGTC > NC_000913/3184338‑3184601 | cATATCACCTTCGTTTTCACGGTCTTCATCATCAAGCACCATTACACCGCGTCCTTCACGCAGCGCAGCCAGTGCATTTTCAACACGTTCGAAAGGCGTACCAAAAGAGGAAAGTAGCGTCTGATTCATGGT‑‑aaaaaaaa < 2:653818/140‑2 (MQ=255) atatCACCTTCGTTTTCACGGTCTTCATCATCAAGCACCATTACACCGCGTCCTTCACGCAGCGCAGCCAGTGCATTTTCAACACGTTCGAAAGGCGTACCAAAAGAGGAAAGTAGCGTCTGATTCATGGT‑‑aaaaaaaac < 2:1344755/140‑3 (MQ=255) atatCACCTTCGTTTTCACGGTCTTCATCATCAAGCACCATTACACCGCGTCCTTCACGCAGCGCAGCCAGTGCATTTTCAACACGTTCGAAAGGCGTACCAAAAGAGGAAAGTAGCGTCTGATTCATGGT‑‑aaaaaaaac < 1:1455008/140‑3 (MQ=255) aCCTTCGTTTTCACGGTCTTCATCATCAAGCACCATTACACCGCGTCCTTCACGCAGCGCAGCCAGTGCATTTTCAACACGTTCGAAAGGCGTACCAAAAGAGGAAAGTAGCGTCTGATTCATGGTA‑AAAAAAACCTCAc < 2:1263555/140‑1 (MQ=255) aCCTTCGTTTTCACGGTCTTCATCATCAAGCACCATTACACCGCGTCCTTCACGCAGCGCAGCCAGTGCATTTTCAACACGTTCGAAAGGCGTACCAAAAGAGGAAAGTAGCGTCTGATTCATGGTA‑AAAAAAACCTCAc < 2:601779/140‑1 (MQ=255) aCCTTCGTTTTCACGGTCTTCATCATCAAGCACCATTACACCGCGTCCTTCACGCAGCGCAGCCAGTGCATTTTCAACACGTTCGAAAGGCGTACCAAAAGAGGAAAGTAGCGTCTGATTCATGGT‑‑AAAAAAACCTCACt < 2:568453/140‑1 (MQ=255) cTTCGTTTTCACGGTCTTCATCATCAAGCACCATTACACCGCGTCCTTCACGCAGCGCAGCCAGTGCATTTTCAACACGTTCGAAAGGCGTACCAAAAGAGGAAAGTAGCGTCTGATTCATGGTA‑AAAAAAACCTCACTa > 1:633977/1‑140 (MQ=255) cTTCGTTTTCACGGTCTTCATCATCAAGCACCATTACACCGCGTCCTTCACGCAGCGCAGCCAGTGCATTTTCAACACGTTCGAAAGGCGTACCAAAAGAGGAAAGTAGCGTCTGATTCATGGTA‑AAAAAAACCTCACTa > 2:499392/1‑140 (MQ=255) tCGTTTTCACGGTCTTCATCATCAAGCACCATTACACCGCGTCCTTCACGCAGCGCAGCCAGTGCATTTTCAACACGTTCGAAAGGCGTACCAAAAGAGGAAAGTAGCGTCTGATTCATGGTA‑AAAAAAACCTCACTaaa > 2:196722/1‑140 (MQ=255) tCGTTTTCACGGTCTTCATCATCAAGCACCATTACACCGCGTCCTTCACGCAGCGCAGCCAGTGCATTTTCAACACGTTCGAAAGGCGTACCAAAAGAGGAAAGTAGCGTCTGATTCATGGTA‑AAAAAAACCTCACTaaa > 1:1126558/1‑140 (MQ=255) tCGTTTTCACGGTCTTCATCATCAAGCACCATTACACCGCGTCCTTCACGCAGCGCAGCCAGTGCATTTTCAACACGTTCGAAAGGCGTACCAAAAGAGGAAAGTAGCGTCTGATTCATGGTA‑AAAAAAACCTCACTaaa > 2:779481/1‑140 (MQ=255) gTTTTCACGGTCTTCATCATCAAGCACCATTACACCGCGTCCTTCACGCAGCGCAGCCAGTGCATTTTCAACACGTTCGAAAGGCGTACCAAAAGAGGAAAGTAGCGTCTGATTCATGGTA‑AAAAAAACCTCACTAAAAt > 1:456865/1‑140 (MQ=255) tCACGGTCTTCATCATCAAGCACCATTACACCGCGTCCTTCACGCAGCGCAGCCAGTGCATTTTCAACACGTTCGAAAGGCGTACCAAAAGAGGAAAGTAGCGTCTGATTCATGGTA‑AAAAAAACCTCACTAAAATTATg < 1:360191/140‑1 (MQ=255) cACGGTCTTCATCATCAAGCACCATTACACCGCGTCCTTCACGCAGCGCAGCCAGTGCATTTTCAACACGTTCGAAAGGCGTACCAAAAGAGGAAAGTAGCGTCTGATTCATGGTA‑AAAAAAACCTCACTAAAATTATgg < 2:1408992/140‑1 (MQ=255) gTCTTCATCATCAAGCACCATTACACCGCGTCCTTCACGCAGCGCAGCCAGTGCATTTTCAACACGTTCGAAAGGCGTACCAAAAGAGGAAAGTAGCGTCTGATTCATGGTA‑AAAAAAACCTCACTAAAATTATGGTTAc > 1:59993/1‑140 (MQ=255) tCTTCATCATCAAGCACCATTACACCGCGTCCTTCACGCAGCGCAGCCAGTGCATTTTCAACACGTTCGAAAGGCGTACCAAAAGAGGAAAGTAGCGTCTGATTCATGGTA‑AAAAAAACCTCACTAAAATTATGGTTAcc > 1:815968/1‑140 (MQ=255) tCTTCATCATCAAGCACCATTACACCGCGTCCTTCACGCAGCGCAGCCAGTGCATTTTCAACACGTTCGAAAGGCGTACCAAAAGAGGAAAGTAGCGTCTGATTCATGGTA‑AAAAAAACCTCACTAAAATTATGGTTAcc < 2:595379/140‑1 (MQ=255) ttCATCATCAAGCACCATTACACCGCGTCCTTCACGCAGCGCAGCCAGTGCATTTTCAACACGTTCGAAAGGCGTACCAAAAGAGGAAAGTAGCGTCTGATTCATGGTA‑AAAAAAACCTCACTAAAATTATGGTTACCAg > 2:166205/1‑140 (MQ=255) atcatcaAGCACCATTACACCGCGTCCTTCACGCAGCGCAGCCAGTGCATTTTCAACACGTTCGAAAGGCGTACCAAAAGAGGAAAGTAGCGTCTGATTCATGGTA‑AAAAAAACCTCACTAAAATTATGGTTACCAGAAt < 1:332054/140‑1 (MQ=255) tcaAGCACCATTACACCGCGTCCTTCACGCAGCGCAGCCAGTGCATTTTCAACACGTTCGAAAGGCGTACCAAAAGAGGAAAGTAGCGTCTGATTCATGGTA‑AAAAAAACCTCACTAAAATTATGGTTACCAGAATCAgg < 1:767119/140‑1 (MQ=255) tcaAGCACCATTACACCGCGTCCTTCACGCAGCGCAGCCAGTGCATTTTCAACACGTTCGAAAGGCGTACCAAAAGAGGAAAGTAGCGTCTGATTCATGGTA‑AAAAAAACCTCACTAAAATTATGGTTACCAGAATCAgg < 2:927858/140‑1 (MQ=255) tcaAGCACCATTACACCGCGTCCTTCACGCAGCGCAGCCAGTGCATTTTCAACACGTTCGAAAGGCGTACCAAAAGAGGAAAGTAGCGTCTGATTCATGGTA‑AAAAAAACCTCACTAAAATTATGGTTACCAGAATCAgg < 1:39145/140‑1 (MQ=255) tcaAGCACCATTACACCGCGTCCTTCACGCAGCGCAGCCAGTGCATTTTCAACACGTTCGAAAGGCGTACCAAAAGAGGAAAGTAGCGTCTGATTCATGGTA‑AAAAAAACCTCACTAAAATTATGGTTACCAGAATCAgg < 1:1205222/140‑1 (MQ=255) caAGCACCATTACATCGCGTCCTTCACGCAGCGCAGCCAGTGCATTTTCAACACGTTCGAAAGGCGTACCAAAAGAGGAAAGTAGCGTCTGATTCATGGTA‑AAAAAAACCTCACTAAAATTATGGTTACCAGAATCAggg < 1:309674/140‑1 (MQ=255) caAGCACCATTACACCGCGTCCTTCACGCAGCGCAGCCAGTGCATTTTCAACACGTTCGAAAGGCGTACCAAAAGAGGAAAGTAGCGTCTGATTCATGGTA‑AAAAAAACCTCACTAAAATTATGGTTACCAGAATCAggg > 1:724549/1‑140 (MQ=255) caAGCACCATTACACCGCGTCCTTCACGCAGCGCAGCCAGTGCATTTTCAACACGTTCGAAAGGCGTACCAAAAGAGGAAAGTAGCGTCTGATTCATGGTA‑AAAAAAACCTCACTAAAATTATGGTTACCAGAATCAggg < 1:789814/140‑1 (MQ=255) caAGCACCATTACACCGCGTCCTTCACGCAGCGCAGCCAGTGCATTTTCAACACGTTCGAAAGGCGTACCAAAAGAGGAAAGTAGCGTCTGATTCATGGTA‑AAAAAAACCTCACTAAAATTATGGTTACCAGAATCAggg > 2:589771/1‑140 (MQ=255) caAGCACCATTACACCGCGTCCTTCACGCAGCGCAGCCAGTGCATTTTCAACACGTTCGAAAGGCGTACCAAAAGAGGAAAGTAGCGTCTGATTCATGGTA‑AAAAAAACCTCACTAAAATTATGGTTACCAGAATCAggg > 2:63919/1‑140 (MQ=255) caAACACCATTACACCGCGTCCTTCACGCAGCGCAGCCAGTGCATTTTCAACACGTTCGAAAGGCGTACCAAAAGAGGAAAGTAGCGTCTGATTCATGGTA‑AAAAAAACCTCACTAAAATTATGGTTACCAGAATCAggg > 2:1088820/1‑140 (MQ=255) aaacACCATTACACCGCGTCCTTCACGCAGCGCAGCCAGTGCATTTTCAACACGTTCGAAAGGCGTACCAAAAGAGGAAAGTAGCGTCTGATTCATGGTA‑AAAAAAACCTCACTAAAATTATGGTTACCAGAATCAGGGc < 1:1088820/137‑1 (MQ=255) aaGCACCATTACACCGCGTCCTTCACGCAGCGCAGCCAGTGCATTTTCAACACGTTCGAAAGGCGTACCAAAAGAGGGAAATAGCGTCTGATTCATGGTA‑AAAAAAACCTCACTAAAATTATGGTTACCAGAATCAGGGc < 2:1383923/140‑1 (MQ=255) aaGCACCATTACACCGCGTCCTTCACGCAGCGCAGCCAGTGCATTTTCAACACGTTCGAAAGGCGTACCAAAAGAGGAAAGTAGCGTCTGATTCATGGTA‑AAAAAAACCTCACTAAAATTATGGTTACCAGAATCAGGGc < 1:238399/140‑1 (MQ=255) aaGCACCATTACACCGCGTCCTTCACGCAGCGCAGCCAGTGCATTTTCAACACGTTCGAAAGGCGTACCAAAAGAGGAAAGTAGCGTCTGATTCATGGTA‑AAAAAAACCTCACTAAAATTATGGTTACCAGAATCAGGGc < 2:1134237/140‑1 (MQ=255) aaGCACCATTACACCGCGTCCTTCACGCAGCGCAGCCAGTGCATTTTCAACACGTTCGAAAGGCGTACCAAAAGAGGAAAGTAGCGTCTGATTCATGGTA‑AAAAAAACCTCACTAAAATTATGGTTACCAGAATCAGGGc < 2:938741/140‑1 (MQ=255) aGCACCATTACACCGCGTCCTTCACGCAGCGCAGCCAGTGCATTTTCAACACGTTCGAAAGGCGTACCAAAAGAGGAAAGTAGCGTCTGATTCATGGTA‑AAAAAAACCTCACTAAAATTATGGTTACCAGAATCAGGGCa > 1:507701/1‑140 (MQ=255) aGCACCATTACACCGCGTCCTTCACGCAGCGCAGCCAGTGCATTTTCAACACGTTCGAAAGGCGTACCAAAAGAGGAAAGTAGCGTCTGATTCATGGTA‑AAAAAAACCTCACTAAAATTATGGTTACCAGAATCAGGGCa < 1:1458870/140‑1 (MQ=255) cACCATTACACCGCGTCCTTCACGCAGCGCAGCCAGTGCATTTTCAACACGTTCGAAAGGCGTACCAAAAGAGGAAAGTAGCGTCTGATTCATGGTA‑AAAAAAACCTCACTAAAATTATGGTTACCAGAATCAGGGCa < 2:1386480/138‑1 (MQ=255) cACCATTACACCGCGTCCTTCACGCAGCGCAGCCAGTGCATTTTCAACACGTTCGAAAGGCGTACCAAAAGAGGAAAGTAGCGTCTGATTCATGGTA‑AAAAAAACCTCACTAAAATTATGGTTACCAGAATCAGGGCa > 1:1386480/1‑138 (MQ=255) cATTACACCGCGTCCTTCACGCAGCGCAGCCAGTGCATTTTCAACACGTTCGAAAGGCGTACCAAAAGAGGAAAGTAGCGTCTGATTCATGGTA‑AAAAAAACCTCACTAAAATTATGGTTACCAGAATCAGGGCAGTCtt < 1:235514/140‑1 (MQ=255) cATTACACCGCGTCCTTCACGCAGCGCAGCCAGTGCATTTTCAACACGTTCGAAAGGCGTACCAAAAGAGGAAAGTAGCGTCTGATTCATGGTA‑AAAAAAACCTCACTAAAATTATGGTTACCAGAATCAGGGCAGTCtt > 1:1331207/1‑140 (MQ=255) ttACACCGCGTCCTTCACGCAGCGCAGCCAGTGCATTTTCAACACGTTCGAAAGGCGTACCAAAAGAGGAAAGTAGCGTCTGATTCATGGTA‑AAAAAAACCTCACTAAAATTATGGTTACCAGAATCAGGGCAGTCTTAg > 1:1388412/1‑140 (MQ=255) ttACACCGCGTCCTTCACGCAGCGCAGCCAGTGCATTTTCAACACGTTCGAAAGGCGTACCAAAAGAGGAAAGTAGCGTCTGATTCATGGTA‑AAAAAAACCTCACTAAAATTATGGTTACCAGAATCAGGGCAGTCTTAg > 1:166663/1‑140 (MQ=255) tACACCGCGTCCTTCACGCAGCGCAGCCAGTGCATTTTCAACACGTTCGAAAGGCGTACCAAAAGAGGAAAGTAGCGTCTGATTCATGGTA‑AAAAAAACCTCACTAAAATTATGGTTACCAGAATCAGGGCAGTCTTAgg < 2:456865/140‑1 (MQ=255) cgTCCTTCACGCAGCGCAGCCAGTGCATTTTCAACACGTTCGAAAGGCGTACCAAAAGAGGAAAGTAGCGTCTGATTCATGGTA‑AAAAAAACCTCACTAAAATTATGGTTACCAGAATCAGGGc > 1:761510/1‑124 (MQ=255) cgTCCTTCACGCAGCGCAGCCAGTGCATTTTCAACACGTTCGAAAGGCGTACCAAAAGAGGAAAGTAGCGTCTGATTCATGGTA‑AAAAAAACCTCACTAAAATTATGGTTACCAGAATCAGGGc > 1:781716/1‑124 (MQ=255) cgTCCTTCACGCAGCGCAGCCAGTGCATTTTCAACACGTTCGAAAGGCGTACCAAAAGAGGAAAGTAGCGTCTGATTCATGGTA‑AAAAAAACCTCACTAAAATTATGGTTACCAGAATCAGGGc < 2:761510/124‑1 (MQ=255) cgTCCTTCACGCAGCGCAGCCAGTGCATTTTCAACACGTTCGAAAGGCGTACCAAAAGAGGAAAGTAGCGTCTGATTCATGGTA‑AAAAAAACCTCACTAAAATTATGGTTACCAGAATCAGGGc < 2:781716/124‑1 (MQ=255) cgTCCTTCACGCAGCGCAGCCAGTGCATTTTCAACACGTTCGAAAGGCGTACCAAAAGAGGAAAGTAGCGTCTGATTCATGGTA‑AAAAAAACCTCACTAAAATTATGGTTACCAGAATCAGGGCAGTCTTAGGAGTggcg > 2:95781/1‑140 (MQ=255) cgTCCTTCACGCAGCGCAGCCAGTGCATTTTCAACACGTTCGAAAGGCGTACCAAAAGAGGAAAGTAGCGTCTGATTCATGGTA‑AAAAAAACCTCACTAAAATTATGGTTACCAGAATCAGGGCAGTCTTAGGAGTggcg > 2:344390/1‑140 (MQ=255) cgTCCTTCACGCAGCGCAGCCAGTGCATTTTCAACACGTTCGAAAGGCGTACCAAAAGAGGAAAGTAGCGTCTGATTCATGGTA‑AAAAAAACCTCACTAAAATTATGGTTACCAGAATCAGGGCAGTCTTAGGAGTggcg > 1:1313359/1‑140 (MQ=255) cgTCCTTCACGCAGCGCAGCCAGTGCATTTTCAACACGTTCGAAAGGCGTACCAAAAGAGGAAAGTAGCGTCTGATTCATGGTA‑AAAAAAACCTCACTAAAATTATGGTTACCAGAATCAGGGCAGTCTTAGGAGTggcg > 1:929900/1‑140 (MQ=255) cgTCCTTCACGCAGCGCAGCCAGTGCATTTTCAACACGTTCGAAAGGCGTACCAAAAGAGGAAAGTAGCGTCTGATTCATGGTA‑AAAAAAACCTCACTAAAATTATGGTTACCAGAATCAGGGCAGTCTTAGGAGTggcg > 1:1001689/1‑140 (MQ=255) cgTCCTTCACGCAGCGCAGCCAGTGCATTTTCAACACGTTCGAAAGGCGTACCAAAAGAGGAAAGTAGCGTCTGATTCATGGTA‑AAAAAAACCTCACTAAAATTATGGTTACCAGAATCAGGGCAGTCTTAGGAGTggcg > 2:333921/1‑140 (MQ=255) tCCTTCACGCAGCGCAGCCAGTGCATTTTCAACACGTTCGAAAGGCGTACCAAAAGAGGAAAGTAGCGTCTGATTCATGGTA‑AAAAAAACCTCACTAAAATTATGGTTACCAGAATCAGGGCAGTCTTAGGAGTggcggc > 1:868577/1‑140 (MQ=255) tCCTTCACGCAGCGCAGCCAGTGCATTTTCAACACGTTCGAAAGGCGTACCAAAAGAGGAAAGTAGCGTCTGATTCATGGTA‑AAAAAAACCTCACTAAAATTATGGTTACCAGAATCAGGGCAGTCTTAGGAGTggcggc > 1:438778/1‑140 (MQ=255) tCCTTCACGCAGCGCAGCCAGTGCATTTTCAACACGTTCGAAAGGCGTACCAAAAGAGGAAAGTAGCGTCTGATTCATGGTA‑AAAAAAACCTCACTAAAATTATGGTTACCAGAATCAGGGCAGTCTTAGGAGTggcggc > 1:1007615/1‑140 (MQ=255) cTTCACGCAGCGCAGCCAGTGCATTTTCAACACGTTCGAAAGGCGTACCAAAAGAGGAAAGTAGCGTCTGATTCATGGTA‑AAAAAAACCTCACTAAAATTATGGTTACCAGAATCAGGGCAGTCTTAGGAGTGGCGGCat < 2:220230/140‑1 (MQ=255) cTTCACGCAGCGCAGCCAGTGCATTTTCAACACGTTCGAAAGGCGTACCAAAAGAGGAAAGTAGCGTCTGATTCATGGTA‑AAAAAAACCTCACTAAAATTATGGTTACCAGAATCAGGGCAGTCTTAGGAGTGGCGGCat < 1:499392/140‑1 (MQ=255) gcagcgcagcCAGTGCATTTTCAACACGTTCGAAAGGCGTACCAAAAGAGGAAAGTAGCGTCTGATTCATGGTA‑AAAAAAACCTCACTAAAATTATGGTTACCAGAATCAGGGCAGTCTTAGGAGTGGCGGCATATAGcc < 2:1388412/140‑1 (MQ=255) gcagcgcagcCAGTGCATTTTCAACACGTTCGAAAGGCGTACCAAAAGAGGAAAGTAGCGTCTGATTCATGGTA‑AAAAAAACCTCACTAAAATTATGGTTACCAGAATCAGGGCAGTCTTAGGAGTGGCGGCATATAGcc < 1:779481/140‑1 (MQ=255) gcagcgcagcCAGTGCATTTTCAACACGTTCGAAAGGCGTACCAAAAGAGGAAAGTAGCGTCTGATTCATGGTA‑AAAAAAACCTCACTAAAATTATGGTTACCAGAATCAGGGCAGTCTTAGGAGTGGCGGCATATAGcc < 1:1392751/140‑1 (MQ=255) cagcgcagcCAGTGCATTTTCAACACGTTCGAAAGGCGTACCAAAAGAGGAAAGTAGCGTCTGATTCATGGTA‑AAAAAAACCTCACTAAAATTATGGTTACCAGAATCAGGGCAGTCTTAGGAGTGGCGGCATATAGCCa > 1:530682/1‑140 (MQ=255) agcgcagcCAGTGCATTTTCGACACGTTCGAAAGGCGTACCAAAAGAGGAAAGTAGCGTCTGATTCATGGTA‑AAAAAAACCTCACTAAAATTATGGTTACCAGAATCAGGGCAGTCTTAGGAGTGGCGGCATATAGCCaa > 2:1263763/1‑140 (MQ=255) cgcagcCAGTGCATTTTCAACACGTTCGAAAGGCGTACCAAAAGAGGAAAGTAGCGTCTGATTCATGGTA‑AAAAAAACCTCACTAAAATTATGGTTACCAGAATCAGGGCAGTCTTAGGAGTGGCGGCATATAGCCaaaa > 1:843476/1‑140 (MQ=255) gcCAGTGCATTTTCAACACGTTCGAAAGGCGTACCAAAAGAGGAAAGTAGCGTCTGATTCATGGTA‑AAAAAAACCTCACTAAAATTATGGTTACCAGAATCAGGGCAGTCTTAGGAGTGGCGGCATATAGCCAAAATAAc < 2:868577/140‑1 (MQ=255) ccAGTGCATTTTCAACACGTTCGAAAGGCGTACCAAAAGAGGAAAGTAGCGTCTGATTCATGGTA‑AAAAAAACCTCACTAAAATTATGGTTACCAGAATCAGGGCAGTCTTAGGAGTGGCGGCATATAGCCAAAATAACg > 1:1160740/1‑140 (MQ=255) gCATTTTCAACACGTTCGAAAGGCGTACCAAAAGAGGAAAGTAGCGTCTGATTCATGGTA‑AAAAAAACCTCACTAAAATTATGGTTACCAGAATCAGGGCAGTCTTAGGAGTGGCGGCATATAGCCAAAATAACGTGAGc < 1:333921/140‑1 (MQ=255) gCATTTTCAACACGTTCGAAAGGCGTACCAAAAGAGGAAAGTAGCGTCTGATTCATGGTA‑AAAAAAACCTCACTAAAATTATGGTTACCAGAATCAGGGCAGTCTTAGGAGTGGCGGCATATAGCCAAAATAACGTGAGc < 2:59993/140‑1 (MQ=255) gCATTTTCAACACGTTCGAAAGGCGTACCAAAAGAGGAAAGTAGCGTCTGATTCATGGTA‑AAAAAAACCTCACTAAAATTATGGTTACCAGAATCAGGGCAGTCTTAGGAGTGGCGGCATATAGCCAAAATAACGTGAGc < 1:767553/140‑1 (MQ=255) gCATTTTCAACACGTTCGAAAGGCGTACCAAAAGAGGAAAGTAGCGTCTGATTCATGGTA‑AAAAAAACCTCACTAAAATTATGGTTACCAGAATCAGGGCAGTCTTAGGAGTGGCGGCATATAGCCAAAATAACGTGAGc < 1:178996/140‑1 (MQ=255) tttCAACACGTTCGAAAGGCGTACCAAAGGAGGAAAGTAGCGTCTGATTCATGGTA‑AAAAAAACCTCACTAAAATTATGGTTACCAGAATCAGGGCAGTCTTAGGAGTGGCGGCATATAGCCAAAATAACGTGAGCGGGt > 2:1324187/1‑140 (MQ=255) acGTTCGAAAGGCGTACCAAAAGAGGAAAGTAGCGTCTGATTCATGGTA‑AAAAAAACCTCACTAAAATTATGGTTACCAGAATCAGGGCAGTCTTAGGAGTGGCGGCATATAGCCAAAATAACGTGAGCGGGTCCATGcc < 1:954113/140‑1 (MQ=255) acGTTCGAAAGGCGTACCAAAAGAGGAAAGTAGCGTCTGATTCATGGTA‑AAAAAAACCTCACTAAAATTATGGTTACCAGAATCAGGGCAGTCTTAGGAGTGGCGGCATATAGCCAAAATAACGTGAGCGGGTCCATGcc < 2:633977/140‑1 (MQ=255) ttCGAAAGGCGTACCAAAAGAGGAAAGTAGCGTCTGATTCATGGTA‑AAAAAAACCTCACTAAAATTATGGTTACCAGAATCAGGGCAGTCTTAGGAGTGGCGGCATATAGCCAAAATAACGTGAGCGGGTCCATGCCCGa > 2:1126150/1‑140 (MQ=255) tCGAAAGGCGTACCAAAAGAGGAAAGTAGCGTCTGATTCATGGTA‑AAAAAAACCTCACTAAAATTATGGTTACCAGAATCAGGGCAGTCTTAGGAGTGGCGGCATATAGCCAAAATAACGTGAGCGGGTCCATGCCCGAc < 1:38384/140‑1 (MQ=255) cGAAAGGCGTACCAAAAGAGGAAAGTAGCGTCTGATTCATGGTA‑AAAAAAACCTCACTAAAATTATGGTTACCAGAATCAGGGCAGTCTTAGGAGTGGCGGCATATAGCCAAAATAACGTGAGCGGGTCCATGCCCGACa > 2:1002995/1‑140 (MQ=255) cGAAAGGCGTACCAAAAGAGGAAAGTAGCGTCTGATTCATGGTA‑AAAAAAACCTCACTAAAATTATGGTTACCAGAATCAGGGCAGTCTTAGGAGTGGCGGCATATAGCCAAAATAACGTGAGCGGGTCCATGCCCGACa > 2:370976/1‑140 (MQ=255) gAAAGGCGTACCAAAGGAGGAAAGTAGCGTCTGATTCATGGTA‑AAAAAAACCTCACTAAAATTATGGTTACCAGAATCAGGGCAGTCTTAGGAGTGGCGGCATATAGCCAAAATAACGTGAGCGGGTCCATGCCCGACAg < 1:1324187/140‑1 (MQ=255) gAAAGGCGTACCAAAAGAGGAAAGTAGCGTCTGATTCATGGTA‑AAAAAAACCTCACTAAAATTATGGTTACCAGAATCAGGGCAGTCTTAGGAGTGGCGGCATATAGCCAAAATAACGTGAGCGGGTCCATGCCCGACAg < 2:166663/140‑1 (MQ=255) cGTACCAAAAGAGGAAAGTAGCGTCTGATTCATGGTA‑AAAAAAACCTCACTAAAATTATGGTTACCAGAATCAGGGCAGTCTTAGGAGTGGCGGCATATAGCCAAAATAACGTGAGCGGGTCCATGCCCGACAGAATCGt > 1:578006/1‑140 (MQ=255) tACCAAAAGAGGAAAGTAGCGTCTGATTCATGGTA‑AAAAAAACCTCACTAAAATTATGGTTACCAGAATCAGGGCAGTCTTAGGAGTGGCGGCATATAGCCAAAATAACGTGAGCGGGTCCATGCCCGACAGAATCGTTa > 1:704848/1‑140 (MQ=255) tACCAAAAGAGGAAAGTAGCGTCTGATTCATGGTA‑AAAAAAACCTCACTAAAATTATGGTTACCAGAATCAGGGCAGTCTTAGGAGTGGCGGCATATAGCCAAAATAACGTGAGCGGGTCCATGCCCGACAGAATCGTTa > 2:110118/1‑140 (MQ=255) tACCAAAAGAGGAAAGTAGCGTCTGATTCATGGTA‑AAAAAAACCTCACTAAAATTATGGTTACCAGAATCAGGGCAGTCTTAGGAGTGGCGGCATATAGCCAAAATAACGTGAGCGGGTCCATGCCCGACAGAATCGTTa > 1:1111780/1‑140 (MQ=255) ccAAAAGAGGAAAGTAGCGTCTGATTCATGGTA‑AAAAAAACCTCACTAAAATTATGGTTACCAGAATCAGGGCAGTCTTAGGAGTGGCGGCATATAGCCAAAATAACGTGAGCGGGTCCATGCCCGACAGAATCGTTAct < 1:196722/140‑1 (MQ=255) ggAAAGTAGCGTCTGATTCATGGTA‑AAAAAAACCTCACTAAAATTATGGTTACCAGAATCAGGGCAGTCTTAGGAGTGGCGGCATATAGCCAAAATAACGTGAGCGGGTCCATGCCCGACAGAATCGTTACTCTCTCCCa > 1:185589/1‑140 (MQ=255) ggAAAGTAGCGTCTGATTCATGGTA‑AAAAAAACCTCACTAAAATTATGGTTACCAGAATCAGGGCAGTCTTAGGAGTGGCGGCATATAGCCAAAATAACGTGAGCGGGTCCATGCCCGACAGAATCGTTACTCTCTCCCa > 1:858622/1‑140 (MQ=255) gAAAGTAGCGTCTGATTCATGGTA‑AAAAAAACCTCACTAAAATTATGGTTACCAGAATCAGGGCAGTCTTAGGAGTGGCGGCATATAGCCAAAATAACGTGAGCGGGTCCATGCCCGACAGAATCGTTACTCTCTCCCAt > 2:1275704/1‑140 (MQ=255) gAAAGTAGCGTCTGATTCATGGTA‑AAAAAAACCTCACTAAAATTATGGTTACCAGAATCAGGGCAGTCTTAGGAGTGGCGGCATATAGCCAAAATAACGTGAGCGGGTCCATGCCCGACAGAATCGTTACTCTCTCCCAt > 2:570574/1‑140 (MQ=255) gAAAGTAGCGTCTGATTCATGGTA‑AAAAAAACCTCACTAAAATTATGGTTACCAGAATCAGGGCAGTCTTAGGAGTGGCGGCATATAGCCAAAATAACGTGAGCGGGTCCATGCCCGACAGAATCGTTACTCTCTCCCAt > 1:875875/1‑140 (MQ=255) gAAAGTAGCGTCTGATTCATGGTA‑AAAAAAACCTCACT‑‑AATTATGGTTACCAGAATCAGGGCAGTCTTAGGAGTGGCGGCATATAGCCAAAATAACGTGAGCGGGTCCATGCCCGACAGAATCGTTACTCTCTCCCATc > 1:450356/1‑139 (MQ=255) gAAAGTAGCGTCTGATTCATGGTA‑AAAAAAACCTCACT‑‑AATTATGGTTACCAGAATCAGGGCAGTCTTAGGAGTGGCGGCATATAGCCAAAATAACGTGAGCGGGTCCATGCCCGACAGAATCGTTACTCTCTCCCATc < 2:450356/139‑1 (MQ=255) aaaGTAGCGTCTGATTCATGGTA‑AAAAAAACCTCACTAAAATTATGGTTACCAGAATCAGGGCAGTCTTAGGAGTGGCGGCATATAGCCAAAATAACGTGAGCGGGTCCATGCCCGACAGAATCGTTACTCTCTcc > 1:267114/1‑136 (MQ=255) aaaGTAGCGTCTGATTCATGGTA‑AAAAAAACCTCACTAAAATTATGGTTACCAGAATCAGGGCAGTCTTAGGAGTGGCGGCATATAGCCAAAATAACGTGAGCGGGTCCATGCCCGACAGAATCGTTACTCTCTcc < 2:267114/136‑1 (MQ=255) aGCGTCTGATTCATGGTA‑AAAAAAACCTCACTAAAATTATGGTTACCAGAATCAGGGCAGTCTTAGGAGTGGCGGCATATAGCCAAAATAACGTGAGCGGGTCCATGCCCGACAGAATCGTTACTCTCTCCCATCCGGAc > 2:233049/1‑140 (MQ=255) cGTCTGATTCATGGTA‑AAAAAAACCTCACTAAAATTATGGTTACCAGAATCAGGGCAGTCTTAGGAGTGGCGGCATATAGCCAAAATAACGTGAGCGGGTCCATGCCCGACAGAATCGTTACTCTCTCCCATCCGGActc > 1:517112/1‑140 (MQ=255) tCTGATTCATGGTAAAAAAAAACCTCACTAAAATTATGGTTACCAGAATCAGGGCAGTCTTAGGAGTGGCGGCATATAGCCAAAATAACGTGAGCGGGTCCATGCCCGACAGAATCGTTACTCTCTCCCATCCGGActct > 1:1171023/1‑140 (MQ=255) tGATTCATGGTA‑AAAAAAACCTCACTAAAATTATGGTTACCAGAATCAGGGCAGTCTTAGGAGTGGCGGCATATAGCCAAAATAACGTGAGCGGGTCCATGCCCGACAGAATCGTTACTCTCTCCCATCCGGACTCTAAc > 2:546787/1‑140 (MQ=255) tCATGGTA‑AAAAAAACCTCACTAAAATTATGGTTACCAGAATCAGGGCAGTCTTAGGAGTGGCGGCATATAGCCAAAATAACGTGAGCGGGTCCATGCCCGACAGAATCGTTACTCTCTCCCATCCGGACTCTAACCGTc < 1:95781/140‑1 (MQ=255) tCATGGTA‑AAAAAAACCTCACTAAAATTATGGTTACCAGAATCAGGGCAGTCTTAGGAGTGGCGGCATATAGCCAAAATAACGTGAGCGGGTCCATGCCCGACAGAATCGTTACTCTCTCCCATCCGGACTCTAACCGTc < 1:1002995/140‑1 (MQ=255) | CATATCACCTTCGTTTTCACGGTCTTCATCATCAAGCACCATTACACCGCGTCCTTCACGCAGCGCAGCCAGTGCATTTTCAACACGTTCGAAAGGCGTACCAAAAGAGGAAAGTAGCGTCTGATTCATGGT‑‑AAAAAAACCTCACTAAAATTATGGTTACCAGAATCAGGGCAGTCTTAGGAGTGGCGGCATATAGCCAAAATAACGTGAGCGGGTCCATGCCCGACAGAATCGTTACTCTCTCCCATCCGGACTCTAACCGTC > NC_000913/3184338‑3184601 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |