BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,005,245	C→A	R181L (CGG→CTG)	ygeV ←	putative sigma(54)‑dependent transcriptional regulator YgeV

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,005,245	0	C	A	100.0%	382.3 / NA	105	R181L (CGG→CTG)	ygeV	putative sigma(54)‑dependent transcriptional regulator YgeV
Reads supporting (aligned to +/- strand): ref base C (0/0); new base A (54/51); total (54/51)

Only 100 of 106 total aligned reads displayed.

ATGAAACAATATGCTGCATATGTCCATGGGTAAAATTACTCTCAAATGTTAATGGTCTGAAACGGATAGGTTTCCCAATAATATTATTTTGCACAACACCAAGTGTTTTTAAGGCAGTCTGATTAACAAACTGAACCCGATTTTCATCATCTACAACTAATACGCCCTGATCCATATTATCGATCATGGTCGCAAATATTTTACTGATGTTATCTCCTGGCCCCTGATCCTCCAGAAGTTTCGAAACAAAAATGGTGGATATATGGCGAACA  >  NC_000913/3005108‑3005379

aTGAAACAATATGCTGCATATGTCCATGGGTAAAATTACTCTCAAATGTTAATGGTCTGAAACGGATAGGTTTCCCAATAATATTATTTTGCACAACACCAAGTGTTTTTAAGGCAGTCTGATTAACAAACTGAACCAGa                                                                                                                                      >  1:1307437/1‑140 (MQ=255)

 tGAAACAATATGCTGCATATGTCCATGGGTAAAATTACTCTCAAATGTTAATGGTCTGAAACGGATAGGTTTCCCAATAATATTATTTTGCACAACACCAAGTGTTTTTAAGGCAGTCTGATTAACAAACTGAACCAGAt                                                                                                                                     >  2:886089/1‑140 (MQ=255)

   aaaCAATATGCTGCATATGTCCATGGGTAAAATTACTCTCAAATGTTAATGGTCTGAAACGGATAGGTTTCCCAATAATATTATTTTGCACAACACCAAGTGTTTTTAAGGCAGTCTGATTAACAAACTGAACCAGAttt                                                                                                                                   <  1:689321/140‑1 (MQ=255)

      cAATATGCTGCATATGTCCATGGGTAAAATTACTCTCAAATGTTAATGGTCTGAAACGGATAGGTTTCCCAATAATATTATTTTGCACAACACCAAGTGTTTTTAAGGCAGTCTGATTAACAAACTGAACCAGATTTtca                                                                                                                                <  1:768473/140‑1 (MQ=255)

      cAATATGCTGCATATGTCCATGGGTAAAATTACTCTCAAATGTTAATGGTCTGAAACGGATAGGTTTCCCAATAATATTATTTTGCACAACACCAAGTGTTTTTAAGGCAGTCTGATTAACAAACTGAACCAGATTTtca                                                                                                                                <  1:1106505/140‑1 (MQ=255)

       aaTATGCTGCATATGTCCATGGGTAAAATTACTCTCAAATGTTAATGGTCTGAAACGGATAGGTTTCCCAATAATATTATTTTGCACAACACCAAGTGTTTTTAAGGCAGTCTGATTAACAAACTGAACCAGATTTtcat                                                                                                                               <  2:781665/140‑1 (MQ=255)

          atGCTGCATATGTCCATGGGTAAAATTACTCTCAAATGTTAATGGTCTGAAACGGATAGGTTTCCCAATAATATTATTTTGCACAACACCAAGTGTTTTTAAGGCAGTCTGATTAACAAACTGAACCAGATTTTcatcat                                                                                                                            <  1:886089/140‑1 (MQ=255)

           tgctgcATATGTCCATGGGTAAAATTACTCTCAAATGTTAATGGTCTGAAACGGATAGGTTTCCCAATAATATTATTTTGCACAACACCAAGTGTTTTTAAGGCAGTCTGATTAACAAACTGAACCAGATTTTCatcatc                                                                                                                           <  2:1307437/140‑1 (MQ=255)

           tgctgcATATGTCCATGGGCAAAATTACTCCCAAATGTTAATGGTCTGAAACGGATAGGTTTCCCAATAATATTATTTTGCACAACACCAAGCGTTTTTAAGGCAGACTGATTAACAGACTCAACCAGATTTTCatcatc                                                                                                                           >  2:844209/1‑140 (MQ=255)

            gctgcATATGTCCATGGGTAAAATTACTCTCAAATGTTAATGGTCTGAAACGGATAGGTTTCCCAATAATATTATTTTGCACAACACCAAGTGTTTTTAAGGCAGTCTGATTAACAAACTGAACCAGATTTTCATCATCt                                                                                                                          >  2:915620/1‑140 (MQ=255)

              tgcATATGTCCATGGGTAAAATTACTCTCAAATGTTAATGGTCTGAAACGGATAGGTTTCCCAATAATATTATTTTGCACAACACCAAGTGTTTTTAAGGCAGTCTGATTAACAAACTGAACCAGATTTTCATCATCTAc                                                                                                                        >  1:1322749/1‑140 (MQ=255)

              tgcATATGTCCATGGGTAAAATTACTCTCAAATGTTAATGGTCTGAAACGGATAGGTTTCCCAATAATATTATTTTGCACAACACCAAGTGTTTTTAAGGCAGTCTGATTAACAAACTGAACCAGATTTTCATCATCTAc                                                                                                                        >  1:792349/1‑140 (MQ=255)

              tgcATATGTCCATGGGTAAAATTACTCTCAAATGTTAATGGTCTGAAACGGATAGGTTTCCCAATAATATTATTTTGCACAACACCAAGTGTTTTTAAGGCAGTCTGATTAACAAACTGAACCAGATTTTCATCATCTAc                                                                                                                        >  2:464816/1‑140 (MQ=255)

                cATATGTCCATGGGTAAAATTACTCTCAAATGTTAATGGTCTGAAACGGATAGGTTTCCCAATAATATTATTTTGCACAACACCAAGTGTTTTTAAGGCAGTCTGATTAACAAACTGAACCAGATTTTCATCATCTACaa                                                                                                                      >  2:149790/1‑140 (MQ=255)

                cATATGTCCATGGGTAAAATTACTCTCAAATGTTAATGGTCTGAAACGGATAGGTTTCCCAATAATATTATTTTGCACAACACCAAGTGTTTTTAAGGCAGTCTGATTAACAAACTGAACCAGATTTTCATCATCTACaa                                                                                                                      >  1:1261761/1‑140 (MQ=255)

                cATATGTCCATGGGTAAAATTACTCTCAAATGTTAATGGTCTGAAACGGATAGGTTTCCCAATAATATTATTTTGCACAACACCAAGTGTTTTTAAGGCAGTCTGATTAACAAACTGAACCAGATTTTCATCATCTACaa                                                                                                                      <  1:276942/140‑1 (MQ=255)

                 atatGTCCATGGGTAAAATTACTCTCAAATGTTAATGGTCTGAAACGGATAGGTTTCCCAATAATATTATTTTGCACAACACCAAGTGTTTTTAAGGCAGTCTGATTAACAAACTGAACCAGATTTTCATCATCTACAAc                                                                                                                     >  2:524987/1‑140 (MQ=255)

                   atGTCCATGGGTAAAATTACTCTCAAATGTTAATGGTCTGAAACGGATAGGTTTCCCAATAATATTATTTTGCACAACACCAAGTGTTTTTAAGGCAGTCTGATTAACAAACTGAACCAGATTTTCATCATCTACAACTa                                                                                                                   >  1:1331084/1‑140 (MQ=255)

                     gTCCATGGGTAAAATTACTCTCAAATGTTAATGGTCTGAAACGGATAGGTTTCCCAATAATATTATTTTGCACAACACCAAGTGTTTTTAAGGCAGTCTGATTAACAAACTGAACCAGATTTtca                                                                                                                                <  1:542559/125‑1 (MQ=255)

                     gTCCATGGGTAAAATTACTCTCAAATGTTAATGGTCTGAAACGGATAGGTTTCCCAATAATATTATTTTGCACAACACCAAGTGTTTTTAAGGCAGTCTGATTAACAAACTGAACCAGATTTtca                                                                                                                                >  2:542559/1‑125 (MQ=255)

                     gTCCATGGGTAAAATTACTCTCAAATGTTAATGGTCTGAAACGGATAGGTTTCCCAATAATATTATTTTGCACAACACCAAGTGTTTTTAAGGCAGTCTGATTAACAAACTGAACCAGATTTTCATCATCt                                                                                                                          >  1:1358464/1‑131 (MQ=255)

                     gTCCATGGGTAAAATTACTCTCAAATGTTAATGGTCTGAAACGGATAGGTTTCCCAATAATATTATTTTGCACAACACCAAGTGTTTTTAAGGCAGTCTGATTAACAAACTGAACCAGATTTTCATCATCt                                                                                                                          <  2:1358464/131‑1 (MQ=255)

                     gTCCATGGGTAAAATTACTCTCAAATGTTAATGGTCTGAAACGGATAGGTTTCCCAATAATATTATTTTGCACAACACCAAGTGTTTTTAAGGCAGTCTGATTAACAAACTGAACCAGATTTTCATCATCTACAACTAAt                                                                                                                 <  2:1130286/140‑1 (MQ=255)

                     gTCCATGGGTAAAATTACTCTCAAATGTTAATGGTCTGAAACGGATAGGTTTCCCAATAATATTATTTTGCACAACACCAAGTGTTTTTAAGGCAGTCTGATTAACAAACTGAACCAGATTTTCATCATCTACAACTAAt                                                                                                                 >  1:801799/1‑140 (MQ=255)

                     gTCCATGGGTAAAATTACTCTCAAATGTTAATGGTCTGAAACGGATAGGTTTCCCAATAATATTATTTTGCACAACACCAAGTGTTTTTAAGGCAGTCTGATTAACAAACTGAACCAGATTTTCATCATCTACAACTAAt                                                                                                                 >  1:1419717/1‑140 (MQ=255)

                     gTCCATGGGTAAAATTACTCTCAAATGTTAATGGTCTGAAACGGATAGGTTTCCCAATAATATTATTTTGCACAACACCAAGTGTTTTTAAGGCAGTCTGATTAACAAACTGAACCAGATTTTCATCATCTACAACTAAt                                                                                                                 >  1:134952/1‑140 (MQ=255)

                     gTCCATGGGTAAAATTACTCTCAAATGTTAATGGTCTGAAACGGATAGGTTTCCCAATAATATTATTTTGCACAACACCAAGTGTTTTTAAGGCAGTCTGATTAACAAACTGAACCAGATTTTCATCATCTACAACTAAt                                                                                                                 >  2:983182/1‑140 (MQ=255)

                          tGGGTAAAATTACTCTCAAATGTTAATGGTCTGAAACGGATAGGTTTCCCAATAATATTATTTTGCACAACACCAAGTGTTTTTAAGGCAGTCTGATTAACAAACTGAACCAGATTTTCATCATCTACaa                                                                                                                      <  1:558173/130‑1 (MQ=255)

                          tGGGTAAAATTACTCTCAAATGTTAATGGTCTGAAACGGATAGGTTTCCCAATAATATTATTTTGCACAACACCAAGTGTTTTTAAGGCAGTCTGATTAACAAACTGAACCAGATTTTCATCATCTACaa                                                                                                                      >  2:558173/1‑130 (MQ=255)

                          tGGGTAAAATTACTCTCAAATGTTAATGGTCTGAAACGGATAGGTTTCCCAATAATATTATTTTGCACAACACCAAGTGTTTTTAAGGCAGTCTGATTAACAAACTGAACCAGATTTTCATCATCTACAACTa                                                                                                                   >  2:519653/1‑133 (MQ=255)

                          tGGGTAAAATTACTCTCAAATGTTAATGGTCTGAAACGGATAGGTTTCCCAATAATATTATTTTGCACAACACCAAGTGTTTTTAAGGCAGTCTGATTAACAAACTGAACCAGATTTTCATCATCTACAACTa                                                                                                                   <  1:519653/133‑1 (MQ=255)

                          tGGGTAAAATTACTCTCAAATGTTAATGGTCTGAAACGGATAGGTTTCCCAATAATATTATTTTGCACAACACCAAGTGTTTTTAAGGCAGTCTGATTAACAAACTGAACCAGATTTTCATCATCTACAACTAATACGcc                                                                                                            >  1:497138/1‑140 (MQ=255)

                             gTAAAATTACTCTCAAATGTTAATGGTCTGAAACGGATAGGTTTCCCAATAATATTATTTTGCACAACACCAAGTGTTTTTAAGGCAGTCTGATTAACAAACTGAACCAGATTTTCATCATCTACAACTAATACGCCCTg                                                                                                         <  1:267647/140‑1 (MQ=255)

                             gTAAAATTACTCTCAAATGTTAATGGTCTGAAACGGATAGGTTTCCCAATAATATTATTTTGCACAACACCAAGTGTTTTTAAGGCAGTCTGATTAACAAACTGAACCAGATTTTCATCATCTACAACTAATACGCCCTg                                                                                                         <  1:1059397/140‑1 (MQ=255)

                               aaaaTTACTCTCAAATGTTAATGGTCTGAAACGGATAGGTTTCCCAATAATATTATTTTGCACAACACCAAGTGTTTTTAAGGCAGTCTGATTAACAAACTGAACCAGATTTTCATCATCTACAACTAATACGCCCTGAt                                                                                                       <  2:792349/140‑1 (MQ=255)

                               aaaaTTACTCTCAAATGTTAATGGTCTGAAACGGATAGGTTTCCCAATAATATTATTTTGCACAACACCAAGTGTTTTTAAGGCAGTCTGATTAACAAACTGAACCAGATTTTCATCATCTACAACTAATACGCCCTGAt                                                                                                       <  1:405921/140‑1 (MQ=255)

                                 aaTTACTCTCAAATGTTAATGGTCTGAAACGGATAGGTTTCCCAATAATATTATTTTGCACAACACCAAGTGTTTTTAAGGCAGTCTGATTAACAAACTGAACCAGATTTTCATCATCTACAACTAATACGCCCTGATcc                                                                                                     <  1:261324/140‑1 (MQ=255)

                                  aTTACTCTCAAATGTTAATGGTCTGAAACGGATAGGTTTCCCAATAATATTATTTTGCACAACACCAAGTGTTTTTAAGGCAGTCTGATTAACAAACTGAACCAGATTTTCATCATCTACAACTAATACGCCCTGATCCa                                                                                                    <  1:687753/140‑1 (MQ=255)

                                      ctctCAAATGTTAATGGTCTGAAACGGATAGGTTTCCCAATAATATTATTTTGCACAACACCAAGTGTTTTTAAGGCAGTCTGATTAACAAACTGAACCAGATTTTCATCATCTACAACTAATACGCCCTGATCCAtatt                                                                                                >  2:273831/1‑140 (MQ=255)

                                       tctcAAATGTTAATGGTCTGAAACGGATAGGTTTCCCAATAATATTATTTTGCACAACACCAAGTGTTTTTAAGGCAGTCTGATTAACAAACTGAACCAGATTTTCATCATCTACAACTAATACGCCCTGATCCAtatta                                                                                               >  2:554066/1‑140 (MQ=255)

                                       tctcAAATGTTAATGGTCTGAAACGGATAGGTTTCCCAATAATATTATTTTGCACAACACCAAGTGTTTTTAAGGCAGTCTGATTAACAAACTGAACCAGATTTTCATCATCTACAACTAATACGCCCTGATCCAtatta                                                                                               >  1:34975/1‑140 (MQ=255)

                                           aaaTGTTAATGGTCTGAAACGGATAGGTTTCCCAATAATATTATTTTGCACAACACCAAGTGTTTTTAAGGCAGTCTGATTAACAAACTGAACCAGATTTTCATCATCTACAACTAATACGCCCTGATCCATATTATCGa                                                                                           >  1:448180/1‑140 (MQ=255)

                                                 tAATGGTCTGAAACGGATAGGTTTCCCAATAATATTATTTTGCACAACACCAAGTGTTTTTAAGGCAGTCTGATTAACAAACTGAACCAGATTTTCATCATCTACAACTAATACGCCCTGATCCATATTATCGATCATgg                                                                                     >  1:348452/1‑140 (MQ=255)

                                                 tAATGGTCTGAAACGGATAGGTTTCCCAATAATATTATTTTGCACAACACCAAGTGTTTTTAAGGCAGTCTGATTAACAAACTGAACCAGATTTTCATCATCTACAACTAATACGCCCTGATCCATATTATCGATCATgg                                                                                     <  2:660035/140‑1 (MQ=255)

                                                   aTGGTCTGAAACGGATAGGTTTCCCAATAATATTATTTTGCACAACACCAAGTGTTTTTAAGGCAGTCTGATTAACAAACTGAACCAGATTTTCATCATCTACAACTAATACGCCCTGATCCATATTATCGATCATGGTc                                                                                   >  1:718116/1‑140 (MQ=255)

                                                   aTGGTCTGAAACGGATAGGTTTCCCAATAATATTATTTTGCACAACACCAAGTGTTTTTAAGGCAGTCTGATTAACAAACTGAACCAGATTTTCATCATCTACAACTAATACGCCCTGATCCATATTATCGATCATGGTc                                                                                   >  1:225403/1‑140 (MQ=255)

                                                     ggTCTGAAACGGATAGGTTTCCCAATAATATTATTTTGCACAACACCAAGTGTTTTTAAGGCAGTCTGATTAACAAACTGAACCAGATTTTCATCATCTACAACTAATACGCCCTGATCCATATTATCGATCa                                                                                        >  2:1467959/1‑133 (MQ=255)

                                                     ggTCTGAAACGGATAGGTTTCCCAATAATATTATTTTGCACAACACCAAGTGTTTTTAAGGCAGTCTGATTAACAAACTGAACCAGATTTTCATCATCTACAACTAATACGCCCTGATCCATATTATCGATCa                                                                                        <  1:1467959/133‑1 (MQ=255)

                                                     ggTCTGAAACGGATAGGTTTCCCAATAATATTATTTTGCACAACACCAAGTGTTTTTAAGGCAGTCTGATTAACAAACTGAACCAGATTTTCATCATCTACAACTAATACGCCCTGATCCATATTATCGATCATGGTCGc                                                                                 <  1:149790/140‑1 (MQ=255)

                                                          gAAACGGATAGGTTTCCCAATAATATTATTTTGCACAACACCAAGTGTTTTTAAGGCAGTCTGATTAACAAACTGAACCAGATTTTCATCATCTACAACTAATACGCCCTGATCCATATTATCGATCATGGTCGCAAata                                                                            <  2:727126/140‑1 (MQ=255)

                                                          gAAACGGATAGGTTTCCCAATAATATTATTTTGCACAACACCAAGTGTTTTTAAGGCAGTCTGATTAACAAACTGAACCAGATTTTCATCATCTACAACTAATACGCCCTGATCCATATTATCGATCATGGTCGCAAata                                                                            <  2:197534/140‑1 (MQ=255)

                                                                gATAGGTTTCCCAATAATATTATTTTGCACAACACCAAGTGTTTTTAAGGCAGTCTGATTAACAAACTGAACCAGATTTTCATCATCTACAACTAATACGCCCTGATCCATATTATCGATCATGGTCGCAAATATTTTAc                                                                      <  2:1322749/140‑1 (MQ=255)

                                                                 aTAGGTTTCCCAATAATATTATTTTGCACAACACCAAGTGTTTTTAAGGCAGTCTGATTAACAAACTGAACCAGATTTTCATCATCTACAACTAATACGCCCTGATCCATATTATCGATCATGGTCGCAAATATTTTACt                                                                     <  1:524987/140‑1 (MQ=255)

                                                                 aTAGGTTTCCCAATAATATTATTTTGCACAACACCAAGTGTTTTTAAGGCAGTCTGATTAACAAACTGAACCAGATTTTCATCATCTACAACTAATACGCCCTGATCCATATTATCGATCATGGTCGCAAATATTTTACt                                                                     >  1:541013/1‑140 (MQ=255)

                                                                  tAGGTTTCCCAATAATATTATTTTGCACAACACCAAGTGTTTTTAAGGCAGTCTGATTAACAAACTGAACCAGATTTTCATCATCTACAACTAATACGCCCTGATCCATATTATCGATCATGGTCGCAAATATTTTACTg                                                                    <  2:348452/140‑1 (MQ=255)

                                                                         cccAATAATATTATTTTGCACAACACCAAGTGTTTTTAAGGCAGTCTGATTAACAAACTGAACCAGATTTTCATCATCTACAACTAATACGCCCTGATCCATATTATCGATCATGGTCGCAAATATTTTACTGATGTTAt                                                             >  1:725017/1‑140 (MQ=255)

                                                                         cccAATAATATTATTTTGCACAACACCAAGTGTTTTTAAGGCAGTCTGATTAACAAACTGAACCAGATTTTCATCATCTACAACTAATACGCCCTGATCCATATTATCGATCATGGTCGCAAATATTTTACTGATGTTAt                                                             >  1:1004291/1‑140 (MQ=255)

                                                                         cccAATAATATTATTTTGCACAACACCAAGTGTTTTTAAGGCAGTCTGATTAACAAACTGAACCAGATTTTCATCATCTACAACTAATACGCCCTGATCCATATTATCGATCATGGTCGCAAATATTTTACTGATGTTAt                                                             <  2:1429085/140‑1 (MQ=255)

                                                                           cAATAATATTATTTTGCACAACACCAAGTGTTTTTAAGGCAGTCTGATTAACAAACTGAACCAGATTTTCATCATCTACAACTAATACGCCCTGATCCATATTATCGACCATGGTCGCAAATATTTTACTGATGTTAtct                                                           >  2:496289/1‑140 (MQ=255)

                                                                              taataTTATTTTGCACAACACCAAGTGTTTTTAAGGCAGTCTGATTAACAAACTGAACCAGATTTTCATCATCTACAACTAATACGCCCTGATCCATATTATCGATCATGGTCGCAAATATTTTACTGATGTTATCTCCt                                                        <  2:448180/140‑1 (MQ=255)

                                                                              taataTTATTTTGCACAACACCAAGTGTTTTTAAGGCAGTCTGATTAACAAACTGAACCAGATTTTCATCATCTACAACTAATACGCCCTGATCCATATTATCGATCATGGTCGCAAATATTTTACTGATGTTATCTCCt                                                        <  1:341778/140‑1 (MQ=255)

                                                                              taataTTATTTTGCACAACACCAAGTGTTTTTAAGGCAGTCTGATTAACAAACTGAACCAGATTTTCATCATCTACAACTAATACGCCCTGATCCATATTATCGATCATGGTCGCAAATATTTTACTGATGTTATCTCCt                                                        <  2:718116/140‑1 (MQ=255)

                                                                                      ttttGCACAACACCAAGTGTTTTTAAGGCAGTCTGATTAACAAACTGAACCAGATTTTCATCATCTACAACTAATACGCCCTGATCCATATTATCGATCATGGTCGCAAATATTTTACTGATGTTAt                                                             <  2:1457937/127‑1 (MQ=255)

                                                                                      ttttGCACAACACCAAGTGTTTTTAAGGCAGTCTGATTAACAAACTGAACCAGATTTTCATCATCTACAACTAATACGCCCTGATCCATATTATCGATCATGGTCGCAAATATTTTACTGATGTTAt                                                             >  1:1457937/1‑127 (MQ=255)

                                                                                      ttttGCACAACACCAAGTGTTTTTAAGGCAGTCTGATTAACAAACTGAACCAGATTTTCATCATCTACAACTAATACGCCCTGATCCATATTATCGATCATGGTCGCAAATATTTTACTGATGTTATCTCCTGGCCCCTg                                                >  2:430910/1‑140 (MQ=255)

                                                                                       tttGCACAACACCAAGTGTTTTTAAGGCAGTCTGATTAACAAACTGAACCAGATTTTCATCATCTACAACTAATACGCCCTGATCCATATTATCGATCATGGTCGCAAATATTTTACTGATGTTATCTCCTGGCCCCTGa                                               <  2:910858/140‑1 (MQ=255)

                                                                                       tttGCACAACACCAAGTGTTTTTAAGGCAGTCTGATTAACAAACTGAACCAGATTTTCATCATCTACAACTAATACGCCCTGATCCATATTATCGATCATGGTCGCAAATATTTTACTGATGTTATCTCCTGGCCCCTGa                                               <  2:1331084/140‑1 (MQ=255)

                                                                                        ttGCACAACACCAAGTGTTTTTAAGGCAGTCTGATTAACAAACTGAACCAGATTTTCATCATCTACAACTAATACGCCCTGATCCATATTATCGATCATGGTCGCAAATATTTTACTGATGTTATCTCCTGCCCCCTGAt                                              >  2:1429405/1‑140 (MQ=255)

                                                                                         tGCACAACACCAAGTGTTTTTAAGGCAGTCTGATTAACAAACTGAACCAGATTTTCATCATCTACAACTAATACGCCCTGATCCATATTATCGATCATGGTCGCAAATATTTTACTGATGTTATCTCCTGGCCCCTGAtc                                             >  1:431524/1‑140 (MQ=255)

                                                                                           cacaACACCAAGTGTTTTTAAGGCAGTCTGATTAACAAACTGAACCAGATTTTCATCATCTACAACTAATACGCCCTGATCCATATTATCGATCATGGTCGCAAATATTTTACTGATGTTATCTCCt                                                        <  2:917452/127‑1 (MQ=255)

                                                                                           cacaACACCAAGTGTTTTTAAGGCAGTCTGATTAACAAACTGAACCAGATTTTCATCATCTACAACTAATACGCCCTGATCCATATTATCGATCATGGTCGCAAATATTTTACTGATGTTATCTCCTGGCCCCTGAtcct                                           >  1:240569/1‑140 (MQ=255)

                                                                                            acaacaCCAAGTGTTTTTAAGGCAGTCTGATTAACAAACTGAACCAGATTTTCATCATCTACAACTAATACGCCCTGATCCATATTATCGATCATGGTCGCAAATATTTTACTGATGTTATCTCCTGGCCCCTGAtcctc                                          >  2:850904/1‑140 (MQ=255)

                                                                                               acacCAAGTGTTTTTAAGGCAGTCTGATTAACAAACTGAACCAGATTTTCATCATCTACAACTAATACGCCCTGATCCATATTATCGATCATGGTCGCAAATATTTTACTGATGTTATCTCCTGGCCCCTGATCCTCCAg                                       <  2:541013/140‑1 (MQ=255)

                                                                                                cacCAAGTGTTTTTAAGGCAGTCTGATTAACAAACTGAACCAGATTTTCATCATCTACAACTAATACGCCCTGATCCATATTATCGATCATGGTCGCAAATATTTTACTGATGTTATCTCCTGGCCCCTGATCCTCCAGa                                      >  2:377975/1‑140 (MQ=255)

                                                                                                     aGTGTTTTTAAGGCAGTCTGATTAACAAACTGAACCAGATTTTCATCATCTACAACTAATACGCCCTGATCCATATTATCGATCATGGTCGCAAATATTTTACTGATGTTATCTCCTGGCCCCTGATCCTCCAGAAGttt                                 <  1:983182/140‑1 (MQ=255)

                                                                                                          ttttAAGGCAGTCTGATTAACAAACTGAACCAGATTTTCATCATCTACAACTAATACGCCCTGATCCATATTATCGATCATGGTCGCAAATATTTTACTGATGTTATCTCCTGGCCCCTGATCCTCCAGAAGTTTCGaaa                            >  1:1095761/1‑140 (MQ=255)

                                                                                                           tttAAGGCAGTCTGATTAACAAACTGAACCAGATTTTCATCATCTACAACTAATACGCCCTGATCCATATTATCGATCATGGTCGCAAATATTTTACTGATGTTATCTCCTGGCCCCTGATCCTCCAGAAGTTTCGAAAc                           >  2:542320/1‑140 (MQ=255)

                                                                                                               aGGCAGTCTGATTAACAAACTGAACCAGATTTTCATCATCTACAACTAATACGCCCTGATCCATATTATCGATCATGGTCGCAAATATTTTACTGATGTTATCTCCTGGCCCCTGATCCTCCAGAAGTTTCGAAACaaaa                       <  2:190125/140‑1 (MQ=255)

                                                                                                                ggCAGTCTGATTAACAAACTGAACCAGCTTTTCATCATCTTCAACTAATACGCCCTGGTCCATATTATCGATCATGGTCGCAAATATTTTACTGATGTTATCTCCTGGCCCCTGATCCTCCAGAAGTTTCGAAACaaaaa                      <  1:1316471/140‑1 (MQ=255)

                                                                                                                ggCAGTCTGATTAACAAACTGAACCAGATTTTCATCATCTACAACTAATACGCCCTGATCCATATTATCGACCATGGTCGCAAATATTTTACTGATGTTATCTCCTGGCCCCTGATCCTCCAGAAGTTTCGAAACaaaaa                      <  1:496289/140‑1 (MQ=255)

                                                                                                                   aGTCTGATTAACAAACTGAACCAGATTTTCATCATCTACAACTAATACGCCCTGATCCATATTATCGATCATGGTCGCAAATATTTTACTGATGTTATCTCCTGGCCCCTGATCCTCCAGAAGTTTCGAAACAAAAAtgg                   <  2:240569/140‑1 (MQ=255)

                                                                                                                   aGTCTGATTAACAAACTGAACCAGATTTTCATCATCTACAACTAATACGCCCTGATCCATATTATCGATCATGGTCGCAAATATTTTACTGATGTTATCTCCTGGCCCCTGATCCTCCAGAAGTTTCGAAACAAAAAtgg                   <  2:801799/140‑1 (MQ=255)

                                                                                                                   aGTCTGATTAACAAACTGAACCAGATTTTCATCATCTACAACTAATACGCCCTGATCCATATTATCGATCATGGTCGCAAATATTTTACTGATGTTATCTCCTGGCCCCTGATCCTCCAGAAGTTTCGAAACAAAAAtgg                   >  2:77368/1‑140 (MQ=255)

                                                                                                                    gTCTGATTAACAAACTGAACCAGATTTTCATCATCTACAACTAATACGCCCTGATCCATATTATCGATCATGGTCGCAAATATTTTACTGATGTTATCTCCTGGCCCCTGATCCTCCAGAAGTTTCGAAACAAAAAtggt                  <  2:928761/140‑1 (MQ=255)

                                                                                                                    gTCTGATTAACAAACTGAACCAGATTTTCATCATCTACAACTAATACGCCCTGATCCATATTATCGATCATGGTCGCAAATATTTTACTGATGTTATCTCCTGGCCCCTGATCCTCCAGAAGTTTCGAAACAAAAAtggt                  >  1:11312/1‑140 (MQ=255)

                                                                                                                     tCTGATTAACAAACTGAACCAGATTTTCATCATCTACAACTAATACGCCCTGATCCATATTATCGATCATGGTCGCAAATATTTTACTGATGTTATCTCCTGGCCCCTGATCCTCCAGAAGTTTCGAAACAAAAAtggtg                 >  1:1007931/1‑140 (MQ=255)

                                                                                                                     tCTGATTAACAAACTGAACCAGATTTTCATCATCTACAACTAATACGCCCTGATCCATATTATCGATCATGGTCGCAAATATTTTACTGATGTTATCTCCTGGCCCCTGATCCTCCAGAAGTTTCGAAACAAAAAtgg                   >  1:41835/1‑138 (MQ=255)

                                                                                                                     tCTGATTAACAAACTGAACCAGATTTTCATCATCTACAACTAATACGCCCTGATCCATATTATCGATCATGGTCGCAAATATTTTACTGATGTTATCTCCTGGCCCCTGATCCTCCAGAAGTTTCGAAACAAAAAtgg                   >  1:1252625/1‑138 (MQ=255)

                                                                                                                     tCTGATTAACAAACTGAACCAGATTTTCATCATCTACAACTAATACGCCCTGATCCATATTATCGATCATGGTCGCAAATATTTTACTGATGTTATCTCCTGGCCCCTGATCCTCCAGAAGTTTCGAAACAAAAAtgg                   <  2:1252625/138‑1 (MQ=255)

                                                                                                                     tCTGATTAACAAACTGAACCAGATTTTCATCATCTACAACTAATACGCCCTGATCCATATTATCGATCATGGTCGCAAATATTTTACTGATGTTATCTCCTGGCCCCTGATCCTCCAGAAGTTTCGAAACAAAAAtgg                   <  2:41835/138‑1 (MQ=255)

                                                                                                                          ttAACAAACTGAACCAGATTTTCATCATCTACAACTAATACGCCCTGATCCATATTATCGATCATGGTCGCAAATATTTTACTGATGTTATCTCCTGGCCCCTGATCCTCCAGAAGTTTCGAAACAAAAATGGTGGatat            <  2:134952/140‑1 (MQ=255)

                                                                                                                           tAACAAACTGAACCAGATTTTCATCATCTACAACTAATACGCCCTGATCCATATTATCGATCATGGTCGCAAATATTTTACTGATGTTATCTCCTGGCCCCTGATCCTCCAGAAGTTTCGAAACAAAAATGGTGGatata           >  1:1070483/1‑140 (MQ=255)

                                                                                                                              cAAACTGAACCAGATTTTCATCATCTACAACTAATACGCCCTGATCCATATTATCGATCATGGTCGCAAATATTTTACTGATGTTATCTCCTGGCCCCTGATCCTCCAGAAGTTTCGAAACAAAAAt                     >  1:797560/1‑127 (MQ=255)

                                                                                                                              cAAACTGAACCAGATTTTCATCATCTACAACTAATACGCCCTGATCCATATTATCGATCATGGTCGCAAATATTTTACTGATGTTATCTCCTGGCCCCTGATCCTCCAGAAGTTTCGAAACAAAAAt                     <  2:797560/127‑1 (MQ=255)

                                                                                                                              cAAACTGAACCAGATTTTCATCATCTACAACTAATACGCCCTGATCCATATTATCGATCATGGTCGCAAATATTTTACTGATGTTATCTCCTGGCCCCTGATCCTCCAGAAGTTTCGAAACAAAAATGGTGGATATATgg        >  1:439559/1‑140 (MQ=255)

                                                                                                                               aaaCTGAACCAGATTTTCATCATCTACAACTAATACGCCCTGATCCATATTATCGATCATGGTCGCAAATATTTTACTGATGTTATCTCCTGGCCCCTGATCCTCCAGAAGTTTCGAAACAAAAATGGTGGATATATGGc       >  2:430199/1‑140 (MQ=255)

                                                                                                                                 aCTGAACCAGATTTTCATCATCTACAACTAATACGCCCTGATCCATATTATCGATCATGGTCGCAAATATTTTACTGATGTTATCTCCTGGCCCCTGATCCTCCAGAAGTTTCGAAACAAAAATGGTGGATATATGGCGa     >  1:1402565/1‑140 (MQ=255)

                                                                                                                                    gAACCAGATTTTCATCATCTACAACTAATACGCCCTGATCCATATTATCGATCATGGTCGCAAATATTTTACTGATGTTATCTCCTGGCCCCTGATCCTCCAGAAGTTTCGAAACAAAAATGGTGGATATATGGCGAACa  >  1:343880/1‑140 (MQ=255)

                                                                                                                                    gAACCAGATTTTCATCATCTACAACTAATACGCCCTGATCCATATTATCGATCATGGTCGCAAATATTTTACTGATGTTATCTCCTGGCCCCTGATCCTCCAGAAGTTTCGAAACAAAAATGGTGGATATATGGCGAACa  <  2:1004291/140‑1 (MQ=255)

                                                                                                                                    gAACCAGATTTTCATCATCTACAACTAATACGCCCTGATCCATATTATCGATCATGGTCGCAAATATTTTACTGATGTTATCTCCTGGCCCCTGATCCTCCAGAAGTTTCGAAACAAAAATGGTGGATATATGGCGAACa  <  2:1095761/140‑1 (MQ=255)

ATGAAACAATATGCTGCATATGTCCATGGGTAAAATTACTCTCAAATGTTAATGGTCTGAAACGGATAGGTTTCCCAATAATATTATTTTGCACAACACCAAGTGTTTTTAAGGCAGTCTGATTAACAAACTGAACCCGATTTTCATCATCTACAACTAATACGCCCTGATCCATATTATCGATCATGGTCGCAAATATTTTACTGATGTTATCTCCTGGCCCCTGATCCTCCAGAAGTTTCGAAACAAAAATGGTGGATATATGGCGAACA  >  NC_000913/3005108‑3005379

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`