BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1207805	196 (1.140)	51 (0.330)	37/244	2.2	24.2%	coding (305/630 nt)	ycfK	e14 prophage; protein StfP
*	?	NC_000913	= 1209602	146 (0.960)	51 (0.330)	37/244	2.2	24.2%	pseudogene (54/537 nt)	stfE	e14 prophage; putative side tail fiber protein fragment

Only 100 of 402 total aligned reads displayed.

GCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGA‑GAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGAT  >  NC_000913/1207666‑1207944

tacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGA‑GAAgg                                                                                                                                             <  2:76965‑M1/16‑1 (MQ=255)

tacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGA‑GAAgg                                                                                                                                             <  1:1417880‑M1/16‑1 (MQ=255)

 ccAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGA‑GAAGGc                                                                                                                                            <  2:1870132‑M1/140‑2 (MQ=255)

     ccTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGA‑GAAGGctctg                                                                                                                                        >  2:680839‑M1/1‑135 (MQ=255)

     ccTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGA‑GAAGGctctg                                                                                                                                        >  2:1335026‑M1/1‑135 (MQ=255)

        agatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGA‑GAAGGAGCAAAAc                                                                                                                                     <  1:126715‑M1/24‑1 (MQ=255)

         gagaAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGA‑GAAGGAGCAAAACt                                                                                                                                    <  1:2155633/140‑1 (MQ=255)

             aGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGA‑GAAGGAGCAAAACTCAAt                                                                                                                                >  1:2800346/1‑140 (MQ=255)

               tgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGA‑GAAGGAGCAAAACTCAATgc                                                                                                                              <  2:2461617‑M1/31‑1 (MQ=255)

                ggcggcACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGA‑GAAGGAGCAAAACTCAATgca                                                                                                                             >  2:2723932/1‑140 (MQ=255)

                 ttctggtcatttgttgatacgggtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGA‑GAAGGAGCAAAACTCAATgcag                                                                                                                            <  2:878040‑M1/33‑1 (MQ=255)

                 ttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGA‑GAAGGAGCAAAACTCAATgcag                                                                                                                            <  1:796989‑M1/33‑1 (MQ=255)

                  cggcACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGA‑GAAGGAGCAAAACTCAATgcagc                                                                                                                           <  2:1633145/140‑1 (MQ=255)

                  cggcACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGA‑GAAGGAGCAAAACTCAATgcagc                                                                                                                           <  2:1296809/140‑1 (MQ=255)

                   ggcACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGA‑GAAGGctctgcattacctgttggt                                                                                                                          <  2:158451‑M1/140‑20 (MQ=255)

                   ggcACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGA‑GAAGGAGCAAAACTCAATgcagca                                                                                                                          <  1:447186/140‑1 (MQ=255)

                   ggcACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGA‑GAAGGAGCAAAACTCAATgcagca                                                                                                                          <  1:2036438/140‑1 (MQ=255)

                   ggcACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGA‑GAAGGAGCAAAACTCAATgcagca                                                                                                                          >  1:1125925/1‑140 (MQ=255)

                   ctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGA‑GAAGGAGCAAAACTCAATgcagca                                                                                                                          >  2:285208‑M1/106‑140 (MQ=255)

                    gcACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGA‑GAAGGAGCAAAACTCAATGCAGCaa                                                                                                                         >  1:998129/1‑140 (MQ=255)

                       cGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGA‑GAAGGAGCAAAACTCAATGCAGCAACgg                                                                                                                      <  2:2760307/140‑1 (MQ=255)

                       cGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGA‑GAAGGAGCAAAACTCAATGCAGCAACgg                                                                                                                      <  1:2895707/140‑1 (MQ=255)

                       cGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGA‑GAAGGAGCAAAACTCAATGCAGCAACgg                                                                                                                      <  2:438262/140‑1 (MQ=255)

                        gACCAGTTACTTACCGCACTTCGGGCGCTGTTGTTGAGCCCCAAGAATCCGTATGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTGGGGA‑GAAGGAGCAAAACTCAATGCAGCAACGGc                                                                                                                     <  2:1055802/140‑1 (MQ=21)

                        gACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGA‑GAAGGAGCAAAACTCAATGCAGCAACGGc                                                                                                                     <  1:235959/140‑1 (MQ=255)

                         aCCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGA‑GAAGGAGCAAAACTCAATGCAGCAACGGCt                                                                                                                    >  1:1092535/1‑140 (MQ=255)

                            aGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGA‑GAAGGAGCAAAACTCAATGCAGCAACGGCTACa                                                                                                                 <  2:1763678/140‑1 (MQ=255)

                                gatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGA‑GAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAg                                                                                                             <  1:1676633‑M1/48‑1 (MQ=255)

                                acttacCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGA‑GAAGGctctgcattacctgttggtgtcccggttccgt                                                                                                             <  1:1893247‑M1/140‑33 (MQ=255)

                                 cttacCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGA‑GAAGGctctgcattacctgttggtgtcccggttccgtg                                                                                                            <  2:741899‑M1/140‑34 (MQ=255)

                                     gcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGA‑GAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAgg                                                                                                            >  2:2009283‑M1/88‑136 (MQ=255)

                                        cACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGA‑GAAGGAGCAAAACTCAATGCAGCAACgg                                                                                                                      >  2:473962/1‑123 (MQ=255)

                                        cACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGA‑GAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCAcc                                                                                                     >  1:2626792/1‑140 (MQ=255)

                                        cACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGA‑GAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCAcc                                                                                                     >  1:1480187/1‑140 (MQ=255)

                                        cACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGA‑GAAGGAGC‑AAACTCAATGCAGCAACGGCTACATTAGGACGCACCg                                                                                                    >  1:1251214/1‑140 (MQ=255)

                                           ttCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGA‑GAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGt                                                                                                  >  2:2910327/1‑140 (MQ=255)

                                           ttCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGA‑GAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGt                                                                                                  >  2:1423291/1‑140 (MQ=255)

                                           ttCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGA‑GAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGt                                                                                                  >  2:2221333/1‑140 (MQ=255)

                                             cgcgcgCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGA‑GAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGttt                                                                                                <  1:897474/140‑1 (MQ=255)

                                               cgcgcTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGA‑GAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCa                                                                                              >  1:603248/1‑140 (MQ=255)

                                               cgcgcTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGA‑GAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCa                                                                                              >  1:2750050/1‑140 (MQ=255)

                                                caataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGA‑GAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCAt                                                                                             <  1:2114063‑M1/64‑1 (MQ=255)

                                                       tgTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGA‑GAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCtata                                                                                      <  1:1536559/140‑1 (MQ=255)

                                                       catgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGA‑GAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCtata                                                                                      >  2:1676633‑M1/70‑140 (MQ=255)

                                                        gTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGA‑GAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATAc                                                                                     <  2:2604272/140‑1 (MQ=255)

                                                        gTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGA‑GAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATAc                                                                                     <  1:2503645/140‑1 (MQ=255)

                                                         tgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGA‑GAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATAcc                                                                                    <  2:382059‑M1/73‑1 (MQ=255)

                                                         tgttaaatccccctggtaaaagcaggaatgaagccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGA‑GAAGGCGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCAGTTTCCTAGCTATAcc                                                                                    <  2:1137217‑M1/73‑1 (MQ=255)

                                                             aaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGA‑GAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGtt                                                                                >  1:2846055‑M1/64‑140 (MQ=255)

                                                              ccGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGA‑GAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggc                                                                               >  1:1041029‑M1/1‑78 (MQ=255)

                                                              ccGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGA‑GAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggc                                                                               >  2:232474‑M1/1‑78 (MQ=255)

                                                              ccGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGA‑GAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggc                                                                               >  2:2515039‑M1/1‑78 (MQ=255)

                                                              ccGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGA‑GAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacagg                                                                                    >  2:1645001‑M1/1‑78 (MQ=255)

                                                              ccGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGA‑GAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTa                                                                               >  2:926716/1‑140 (MQ=255)

                                                              ccGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACAGCTCTCGAAAACCTTGGGTTGGGA‑GAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTa                                                                               >  1:409630/1‑140 (MQ=255)

                                                                tccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGA‑GAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATg                                                                             >  1:752834‑M1/61‑140 (MQ=255)

                                                                gCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGA‑GAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctg                                                                             >  1:2690683‑M1/1‑76 (MQ=255)

                                                                gCAAGAATCCGTTTGGCGATATCAAATCGGATCGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGA‑GAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATg                                                                             >  1:937263/1‑140 (MQ=255)

                                                                  cccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGA‑GAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGAt                                                                           >  2:2052116‑M1/59‑140 (MQ=255)

                                                                  aaGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGA‑GAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGAt                                                                           <  2:2178598/140‑1 (MQ=255)

                                                                  aaGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGA‑GAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGAt                                                                           <  1:1921983/140‑1 (MQ=255)

                                                                    gAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGA‑GAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATtg                                                                         <  2:1261791/140‑1 (MQ=255)

                                                                      tggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATtgg                                                                        >  1:561700‑M1/55‑140 (MQ=255)

                                                                       tCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGA‑GAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATtggtg                                                                      <  2:1146855/140‑1 (MQ=255)

                                                                       tCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGA‑GAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATtggtg                                                                      <  2:1092535/140‑1 (MQ=255)

                                                                       ggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGA‑GAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATtggtg                                                                      >  2:2579150‑M1/54‑140 (MQ=255)

                                                                           tttGGCGATATCAAATCGGATCGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGA‑GAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTAt                                                                  <  2:937263/140‑1 (MQ=255)

                                                                             agcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGA‑GAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTg                                                                <  1:1832082‑M1/93‑1 (MQ=255)

                                                                             agcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGA‑GAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTg                                                                <  2:574331‑M1/93‑1 (MQ=255)

                                                                               gCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGA‑GAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgcc                                                              <  2:1793621‑M1/140‑80 (MQ=255)

                                                                                  gaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGA‑GAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCaa                                                           <  1:1340511‑M1/98‑1 (MQ=255)

                                                                                    atgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGA‑GAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATc                                                         >  2:335512‑M1/41‑140 (MQ=255)

                                                                                    atgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGA‑GAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATc                                                         >  2:974884‑M1/41‑140 (MQ=255)

                                                                                    atgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGA‑GAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATc                                                         >  2:1226215‑M1/41‑140 (MQ=255)

                                                                                      cAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGA‑GAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAg                                                       <  1:1950994/140‑1 (MQ=255)

                                                                                       atgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGA‑GAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTAtt                                                                 >  2:1121952‑M1/38‑129 (MQ=255)

                                                                                        aaTCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGA‑GAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTa                                                     <  1:2089831/140‑1 (MQ=255)

                                                                                               tgcttgttatttcttcattttcataaacgTTGGTTTGGGA‑GAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTc                                              >  1:1756264‑M1/30‑140 (MQ=255)

                                                                                               tGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGA‑GAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTc                                              >  2:1526261/1‑140 (MQ=255)

                                                                                               gggCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGA‑GAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTc                                              <  2:409630/139‑1 (MQ=255)

                                                                                                 gCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGA‑GAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAg                                            <  2:1480187/140‑1 (MQ=255)

                                                                                                  cACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGA‑GAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGt                                           <  1:351952/140‑1 (MQ=255)

                                                                                                      gtgCAAACGGCTCTCGAAAACCTTGGTTTGGGA‑GAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTgggg                                       >  1:321539/1‑140 (MQ=255)

                                                                                                       tgCAAACGGCTCTCGAAAACCTTGGTTTGGGA‑GAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccg                                      >  1:1328795‑M1/1‑37 (MQ=255)

                                                                                                       tgCAAACGGCTCTCGAAAACCTTGGTTTGGGA‑GAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTggggg                                      >  1:257391/1‑140 (MQ=255)

                                                                                                       tgCAAACGGCTCTCGAAAACCTTGGTTTGGGA‑GAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATCGAGCAATCAGTAATCATTCAGTggggg                                      >  2:2647369/1‑140 (MQ=255)

                                                                                                          tcttcattttcataaacgTTGGTTTGGGA‑GAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTgg                                   >  1:1594839‑M1/19‑140 (MQ=255)

                                                                                                                 tctcGAAAACCTTGGTTTGGGA‑GAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaa                            >  2:2401005‑M1/1‑27 (MQ=255)

                                                                                                                    cataaacgTTGGTTTGGGA‑GAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCaa                         >  1:227882‑M1/9‑140 (MQ=255)

                                                                                                                           gTTGGTTTGGGA‑GAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATc                  >  1:1643918‑M1/2‑140 (MQ=255)

                                                                                                                           cTTGGTTTGGGA‑GAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATc                  <  1:162310/140‑1 (MQ=255)

                                                                                                                           cTTGGTTTGGGA‑GAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATc                  <  1:1727468/140‑1 (MQ=255)

                                                                                                                               gTTTGGGA‑GAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgaca              >  1:65153‑M1/1‑13 (MQ=255)

                                                                                                                                TTTGGGA‑GAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCct             >  1:2431487‑M1/1‑140 (MQ=255)

                                                                                                                                         AAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTgggggg     >  1:221776‑M1/1‑140 (MQ=255)

                                                                                                                                          aGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaattgc    <  1:1138421‑M1/140‑138 (MQ=255)

                                                                                                                                           GGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGa   >  2:1924294‑M1/1‑140 (MQ=255)

                                                                                                                                           GGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGa   >  1:720686‑M1/1‑140 (MQ=255)

                                                                                                                                            gctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaattgcct  <  2:2266416‑M1/140‑140 (MQ=255)

                                                                                                                                            GAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGAt  >  2:173203‑M1/1‑140 (MQ=255)

GCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGA‑GAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGAT  >  NC_000913/1207666‑1207944

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.