| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 559,427 | G→T | A152S (GCG→TCG) | sfmC → | putative fimbrial chaperone SfmC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 559,427 | 0 | G | T | 98.8% | 880.6 / 2.3 | 249 | A152S (GCG→TCG) | sfmC | putative fimbrial chaperone SfmC |
| Reads supporting (aligned to +/- strand): ref base G (1/2); new base T (99/147); total (100/149) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.68e-01 | |||||||||||
Only 100 of 257 total aligned reads displayed.
TGTTCTGGATGAATGTTAAGACGATCCCTTCGGTAGATAAAAATGCATTGAACGGCAGGAATGTTTTGCAACTGGCGATTTTATCGCGCATGAAATTATTTCTCCGTCCAATTCAATTACAAGAATTACCCGCAGAAGCGCCGGACACACTCAAGTTTTCGCGATCCGGTAACTATATCAATGTTCATAATCCATCACCTTTTTATGTCACCCTGGTTAACTTACAAGTGGGCAGCCAAAAGTTGGGGAATGCTATGGCTGCACCCAGAGTTAA > NC_000913/559290‑559563 | tGTTCTGGATGAATGTTAAGACGATCCCTTCGGTAGATAAAAATGCATTGAACGGCAGGAATGTTTTGCAACTGGCGATTTTATCGCGCATGAAATTATTTCTCCGTCCAATTCAATTACAAGAATTACCCGCAGAAtcg > 1:1127058/1‑140 (MQ=255)tGTTCTGGATGAATGTTAAGACGATCCCTTCGGTAGATAAAAATGCATTGAACGGCAGGAATGTTTTGCAACTGGCGATTTTATCGCGCATGAAATTATTTCTCCGTCCAATTCAATTACAAGAATTACCCGCAGAAtcg > 2:2054150/1‑140 (MQ=255) ggATGAATGTTAAGACGATCCCTTCGGTAGATAAAAATGCATTGAACGGCAGGAATGTTTTGCAACTGGCGATTTTATCGCGCATGAAATTATTTCTCCGTCCAATTCAATTACAAGAATTACCCGCAGAATCGCCGGac < 1:1757754/140‑1 (MQ=255) ggATGAATGTTAAGACGATCCCTTCGGTAGATAAAAATGCATTGAACGGCAGGAATGTTTTGCAACTGGCGATTTTATCGCGCATGAAATTATTTCTCCGTCCAATTCAATTACAAGAATTACCCGCAGAATCGCCGGac < 2:1827104/140‑1 (MQ=255) gATGAATGTTAAGACGATCCCTTCGGTAGATAAAAATGCATTGAACGGCAGGAATGTTTTGCAACTGGCGATTTTATCGCGCATGAAATTATTTCTCCGTCCAATTCAATTACAAGAATTACCCGCAGAATCGCCGGaca > 1:908751/1‑140 (MQ=255) gATGAATGTTAAGACGATCCCTTCGGTAGATAAAAATGCATTGAACGGCAGGAATGTTTTGCAACTGGCGATTTTATCGCGCATGAAATTATTTCTCCGTCCAATTCAATTACAAGAATTACCCGCAGAATCGCCGGaca > 2:2217/1‑140 (MQ=255) gATGAATGTTAAGACGATCCCTTCGGTAGATAAAAATGCATTGAACGGCAGGAATGTTTTGCAACTGGCGATTTTATCGCGCATGAAATTATTTCTCCGTCCAATTCAATTACAAGAATTACCCGCAGAATCGCCGGaca > 2:455898/1‑140 (MQ=255) gATGAATGTTAAGACGATCCCTTCGGTAGATAAAAATGCATTGAACGGCAGGAATGTTTTGCAACTGGCGATTTTATCGCGCATGAAATTATTTCTCCGTCCAATTCAATTACAAGAATTACCCGCAGAATCGCCGGaca > 2:418462/1‑140 (MQ=255) aTGAATGTTAAGACGATCCCTTCGGTAGATAAAAATGCATTGAACGGCAGGAATGTTTTGCAACTGGCGATTTTATCGCGCATGAAATTATTTCTCCGTCCAATTCAATTACAAGAATTACCCGCAGAATCGCCGGacac < 2:1425400/140‑1 (MQ=255) aaTGTTAAGACGATCCCTTCGGTAGATAAAAATGCATTGAACGGCAGGAATGTTTTGCAACTGGCGATTTTATCGCGCATGAAATTATTTCTCCGTCCAATTCAATTACAAGAATTACCCGCAGAATCGCCGGACACACt < 1:212890/140‑1 (MQ=255) aTGTTAAGACGATCCCTTCGGTAGATAAAAATGCATTGAACGGCAGGAATGTTTTGCAACTGGCGATTTTATCGCGCATGAAATTATTTCTCCGTCCAATTCAATTACAAGAATTACCCGCAGAATCGCCGGACACACTc > 2:2823848/1‑140 (MQ=255) aTGTTAAGACGATCCCTTCGGTAGATAAAAATGCATTGAACGGCAGGAATGTTTTGCAACTGGCGATTTTATCGCGCATGAAATTATTTCTCCGTCCAATTCAATTACAAGAATTACCCGCAGAATCGCCGGACACACTc > 2:272663/1‑140 (MQ=255) aaGACGATCCCTTCGGTAGATAAAAATGCATTGAACGGCAGGAATGTTTTGCAACTGGCGATTTTATCGCGCATGAAATTATTTCTCCGTCCAATTCAATTACAAGAATTACCCGCAGAATCGCCGGACACACTCAAGtt > 2:2358329/1‑140 (MQ=255) aaGACGATCCCTTCGGTAGATAAAAATGCATTGAACGGCAGGAATGTTTTGCAACTGGCGATTTTATCGCGCATGAAATTATTTCTCCGTCCAATTCAATTACAAGAATTACCCGCAGAATCGCCGGACACACTCAAGtt > 2:1544814/1‑140 (MQ=255) gACGATCCCTTCGGTAGATAAAAATGCATTGAACGGCAGGAATGTTTTGCAACTGGCGATTTTATCGCGCATGAAATTATTTCTCCGTCCAATTCAATTACAAGAATTACCCGCAGAATCGCCGGACACACTCAAGtttt < 2:819145/140‑1 (MQ=255) gATCCCTTCGGTAGATAAAAATGCATTGAACGGCAGGAATGTTTTGCAACTGGCGATTTTATCGCGCATGAAATTATTTCTCCGTCCAATTCAATTACAAGAATTACCCGCAGAATCGCCGGACACACTCAAGTTTTcgc < 1:849360/140‑1 (MQ=255) gATCCCTTCGGTAGATAAAAATGCATTGAACGGCAGGAATGTTTTGCAACTGGCGATTTTATCGCGCATGAAATTATTTCTCCGTCCAATTCAATTACAAGAATTACCCGCAGAATCGCCGGACACACTCAAGTTTTcgc < 1:374071/140‑1 (MQ=255) gATCCCGTCGGTAGATAAAAATGCATTAAACGGCTAAAAGGGATTGCAACTGGCGATTTTATCGCGCATGAAATTATTTCTCCGTCCAATTCAATTACAAGAATTACCCGCAGAATCGCCGGACACACTCAAGTTTTcgc < 2:1049077/140‑1 (MQ=255) aTCCCTTCGGTAGATAAAAATGCATTGAACGGCAGGAATGTTTTGCAACTGGCGATTTTATCGCGCATGAAATTATTTCTCCGTCCAATTCAATTACAAGAATTACCCGCAGAATCGCCGGaca < 1:573204/124‑1 (MQ=255) tCCCTTCGGTAGATAAAAATGCATTGAACGGCAGGAATGTTTTGCAACTGGCGATTTTATCGCGCATGAAATTATTTCTCCGTCCAATTCAATTACAAGAATTACCCGCAGAATCGCCGGACACACTCAAGTTTTCGCGa > 2:1090706/1‑140 (MQ=255) tCCCTTCGGTAGATAAAAATGCATTGAACGGCAGGAATGTTTTGCAACTGGCGATTTTATCGCGCATGAAATTATTTCTCCGTCCAATTCAATTACAAGAATTACCCGCAGAATCGCCGGACACACTCAAGTTTTCGCGa < 1:1723361/140‑1 (MQ=255) tCCCTTCGGTAGATAAAAATGCATTGAACGGCAGGAATGTTTTGCAACTGGCGATTTTATCGCGCATGAAATTATTTCTCCGTCCAATTCAATTACAAGAATTACCCGCAGAATCGCCGGACACACTCAAGTTTTCGCGa > 2:2281198/1‑140 (MQ=255) tCCCTTCGGTAGATAAAAATGCATTGAACGGCAGGAATGTTTTGCAACTGGCGATTTTATCGCGCATGAAATTATTTCTCCGTCCAATTCAATTACAAGAATTACCCGCAGAATCGCCGGACACACTCAAGTTTTCGCGa > 2:200057/1‑140 (MQ=255) cccTTCGGTAGATAAAAATGCATTGAACGGCAGGAATGTTTTGCAACTGGCGATTTTATCGCGCATGAAATTATTTCTCCGTCCAATTCAATTACAAGAATTACCCGCAGAATCGCCGGACACACTCAAGTTTTCGCGAt > 2:785353/1‑140 (MQ=255) ccTTCGGTAGATAAAAATGCATTGAACGGCAGGAATGTTTTGCAACTGGCGATTTTATCGCGCATGAAATTATTTCTCCGTCCAATTCAATTACAAGAATTACCCGCAGAATCGCCGGACACACTCAAGTTTTCGCGATc < 1:715617/140‑1 (MQ=255) ttCGGTAGATAAAAATGCATTGAACGGCAGGAATGTTTTGCAACTGGCGATTTTATCGCGCATGAAATTATTTCTCCGTCCAATTCAATTACAAGAATTACCCGCAGAATCGCCGGACACGCTCAAGTTTTCGCGATCCg < 2:871871/140‑1 (MQ=255) ttCGGTAGATAAAAATGCATTGAACGGCAGGAATGTTTTGCAACTGGCGATTTTATCGCGCATGAAATTATTTCTCCGTCCAATTCAATTACAAGAATTACCCGCAGAATCGCCGGACACACTCAAGTTTTCGCGATCCg < 2:709961/140‑1 (MQ=255) ttCGGTAGATAAAAATGCATTGAACGGCAGGAATGTTTTGCAACTGGCGATTTTATCGCGCATGAAATTATTTCTCCGTCCAATTCAATTACAAGAATTACCCGCAGAATCGCCGGACACACTCAAGTTTTCGCGATCCg < 2:128925/140‑1 (MQ=255) cGGTAGATAAAAATGCATTGAACGGCAGGAATGTTTTGCAACTGGCGATTTTATCGCGCATGAAATTATTTCTCCGTCCAATTCAATTACAAGAATTACCCGCAGAATCGCCGGACACACTCAAGTTTTCGCGATCCGGt < 1:1693645/140‑1 (MQ=255) cGGTAGATAAAAATGCATTGAACGGCAGGAATGTTTTGCAACTGGCGATTTTATCGCGCATGAAATTATTTCTCCGTCCAATTCAATTACAAGAATTACCCGCAGAATCGCCGGACACACTCAAGTTTTCGCGATCCGGt < 1:1806407/140‑1 (MQ=255) cGGTAGATAAAAATGCATTGAACGGCAGGAATGTTTTGCAACTGGCGATTTTATCGCGCATGAAATTATTTCTCCGTCCAATTCAATTACAAGAATTACCCGCAGAATCGCCGGACACACTCAAGTTTTCGCGATCCGGt < 1:2747195/140‑1 (MQ=255) cGGTAGATAAAAATGCATTGAACGGCAGGAATGTTTTGCAACTGGCGATTTTATCGCGCATGAAATTATTTCTCCGTCCAATTCAATTACAAGAATTACCCGCAGAATCGCCGGACACACTCAAGTTTTCGCGATCCGGt < 2:792267/140‑1 (MQ=255) cGGTAGATAAAAATGCATTGAACGGCAGGAATGTTTTGCAACTGGCGATTTTATCGCGCATGAAATTATTTCTCCGTCCAATTCAATTACAAGAATTACCCGCAGAATCGCCGGACACACTCAAGTTTTCGCGATCCGGt < 1:1294868/140‑1 (MQ=255) cGGTAGATAAAAATGCATTGAACGGCAGGAATGTTTTGCAACTGGCGATTTTATCGCGCATGAAATTATTTCTCCGTCCAATTCAATTACAAGAATTACCCGCAGAATCGCCGGACACACTCAAGTTTTCGCGATCCGGt < 2:1491637/140‑1 (MQ=255) cGGTAGATAAAAATGCATTGAACGGCAGGAATGTTTTGCAACTGGCGATTTTATCGCGCATGAAATTATTTCTCCGTCCAATTCAATTACAAGAATTACCCGCAGAATCGCCGGACACACTCAAGTTTTCGCGATCCGGt < 1:418462/140‑1 (MQ=255) cGGTAGATAAAAATGCATTGAACGGCAGGAATGTTTTGCAACTGGCGATTTTATCGCGCATGAAATTATTTCTCCGTCCAATTCAATTACAAGAATTACCCGCAGAAGCGCCGGACACACTCAAGTTTTCGCGATCCGGt < 1:1404571/140‑1 (MQ=255) ggTAGATAAAAATGCATTGAACGGCAGGAATGTTTTGCAACTGGCGATTTTATCGCGCATGAAATTATTTCTCCGTCCAATTCAATTACAAGAATTACCCGCAGAATCGCAGGACACACTCAACTTTTCGCGATCCGGTa < 2:2570061/140‑1 (MQ=255) gTAGATAAAAATGCATTGAACGGCAGGAATGTTTTGCAACTGGCGATTTTATCGCGCATGAAATTATTTCTCCGTCCAATTCAATTACAAGAATTACCCGCAGAATCGCCGGACACACTCAAGTTTTCGCGATCCGGTaa < 1:2301418/140‑1 (MQ=255) gTAGATAAAAATGCATTGAACGGCAGGAATGTTTTGCAACTGGCGATTTTATCGCGCATGAAATTATTTCTCCGTCCAATTCAATTACAAGAATTACCCGCAGAATCGCCGGACACACTCAAGTTTTCGCGATCCGGTaa < 1:785353/140‑1 (MQ=255) aGATAAAAATGCATTGAACGGCAGGAATGTTTTGCAACTGGCGATTTTATCGCGCATGAAATTATTTCTCCGTCCAATTCAATTACAAGAATTACCCGCAGAATCGCCGGACACACTCAAGTTTTCGCGAt < 1:934389/131‑1 (MQ=255) aGATAAAAATGCATTGAACGGCAGGAATGTTTTGCAACTGGCGATTTTATCGCGCATGAAATTATTTCTCCGTCCAATTCAATTACAAGAATTACCCGCAGAATCGCCGGACACACTCAAGTTTTCGCGATCCGGTAACt > 1:1953496/1‑140 (MQ=255) aGATAAAAATGCATTGAACGGCAGGAATGTTTTGCAACTGGCGATTTTATCGCGCATGAAATTATTTCTCCGTCCAATTCAATTACAAGAATTACCCGCAGAATCGCCGGACACACTCAAGTTTTCGCGATCCGGTAACt > 2:2260475/1‑140 (MQ=255) aTAAAAATGCATTGAACGGCAGGAATGTTTTGCAACTGGCGATTTTATCGCGCATGAAATTATTTCTCCGTCCAATTCAATTACAAGAATTACCCGCAGAATCGCCGGACACACTCAAGTTTTCGCGa > 1:2102606/1‑128 (MQ=255) aTAAAAATGCATTGAACGGCAGGAATGTTTTGCAACTGGCGATTTTATCGCGCATGAAATTATTTCTCCGTCCAATTCAATTACAAGAATTACCCGCAGAATCGCCGGACACACTCAAGTTTTCGCGATCCGGTAACtat > 2:1796844/1‑140 (MQ=255) aTAAAAATGCATTGAACGGCAGGAATGTTTTGCAACTGGCGATTTTATCGCGCATGAAATTATTTCTCCGTCCAATTCAATTACAAGAATTACCCGCAGAATCGCCGGACACACTCAAGTTTTCGCGATCCGGTAACtat > 2:968312/1‑140 (MQ=255) aTAAAAATGCATTGAACGGCAGGAATGTTTTGCAACTGGCGATTTTATCGCGCATGAAATTATTTCTCCGTCCAATTCAATTACAAGAATTACCCGCAGAATCGCCGGACACACTCAAGTTTTCGCGATCCGGTAACtat > 2:57324/1‑140 (MQ=255) aaaaaTGCATTGAACGGCAGGAATGTTTTGCAACTGGCGATTTTATCGCGCATGAAATTATTTCTCCGTCCAATTCAATTACAAGAATTACCCGCAGAATCGCCGGACACACTCAAGTTTTCGCGATCCGGTAACTatat > 1:812414/1‑140 (MQ=255) aaaTGCATTGAACGGCAGGAATGTTTTGCAACTGGCGATTTTATCGCGCATGAAATTATTTCTCCGTCCAATTCAATTACAAGAATTACCCGCAGAATCGCCGGACACACTCAAGTTTTCGCGATCCGGTAACTATATCa < 1:840640/140‑1 (MQ=255) aaaTGCATTGAACGGCAGGAATGTTTTGCAACTGGCGATTTTATCGCGCATGAAATTATTTCTCCGTCCAATTCAATTACAAGAATTACCCGCAGAATCGCCGGACACACTCAAGTTTTCGCGATCCGGTAACTATATCa < 1:2054150/140‑1 (MQ=255) aaaTGCATTGAACGGCAGGAATGTTTTGCAACTGGCGATTTTATCGCGCATGAAATTATTTCTCCGTCCAATTCAATTACAAGAATTACCCGCAGAATCGCCGGACACACTCAAGTTTTCGCGATCCGGTAACTATATCa < 1:2341549/140‑1 (MQ=255) aaaTGCATTGAACGGCAGGAATGTTTTGCAACTGGCGATTTTATCGCGCATGAAATTATTTCTCCGTCCAATTCAATTACAAGAATTACCCGCAGAATCGCCGGACACACTCAAGTTTTCGCGATCCGGTAACTATATCa < 2:2808958/140‑1 (MQ=255) aaaTGCATTGAACGGCAGGAATGTTTTGCAACTGGCGATTTTATCGCGCATGAAATTATTTCTCCGTCCAATTCAATTACAAGAATTACCCGCAGAATCGCCGGACACACTCAAGTTTTCGCGATCCGGTAACTATATCa < 1:600028/140‑1 (MQ=255) aaTGCATTGAACGGCAGGAATGTTTTGCAACTGGCGATTTTATCGCGCATGAAATTATTTCTCCGTCCAATTCAATTACAAGAATTACCCGCAGAATCGCCGGACACACTCAAGTTTTCGCGATCCGGTAACTATATCaa < 2:285959/140‑1 (MQ=255) aaTGCATTGAACGGCAGGAATGTTTTGCAACTGGCGATTTTATCGCGCATGAAATTATTTCTCCGTCCAATTCAATTACAAGAATTACCCGCAGAATCGCCGGACACACTCAAGTTTTCGCGATCCGGTAACTATATCaa < 1:802050/140‑1 (MQ=255) aaTGCATTGAACGGCAGGAATGTTTTGCAACTGGCGATTTTATCGCGCATGAAATTATTTCTCCGTCCAATTCAATTACAAGAATTACCCGCAGAATCGCCGGACACACTCAAGTTTTCGCGATCCGGTAACTATATCaa < 1:1524507/140‑1 (MQ=255) aTGCATTGAACGGCAGGAATGTTTTGCAACTGGCGATTTTATCGCGCATGAAATTATTTCTCCGTCCAATTCAATTACAAGAATTACCCGCAGAATCGCCGGACACACTCAAGTTTTCGCGATCCGGTAACTATATCAAt > 1:1840937/1‑140 (MQ=255) aTGCATTGAACGGCAGGAATGTTTTGCAACTGGCGATTTTATCGCGCATGAAATTATTTCTCCGTCCAATTCAATTACAAGAATTACCCGCAGAATCGCCGGACACACTCAAGTTTTCGCGATCCGGTAACTATATCAAt < 1:11949/140‑1 (MQ=255) tGCATTGAACGGCAGGAATGTTTTGCAACTGGCGATTTTATCGCGCATGAAATTATTTCTCCGTCCAATTCAATTACAAGAATTACCCGCAGAATCGCCGGACACACTCAAGTTTTCGCGATCCGGt > 2:2487064/1‑127 (MQ=255) tGCATTGAACGGCAGGAATGTTTTGCAACTGGCGATTTTATCGCGCATGAAATTATTTCTCCGTCCAATTCAATTACAAGAATTACCCGCAGAATCGCCGGACACACTCAAGTTTTCGCGATCCGGTAACTATATCAATg > 2:1034073/1‑140 (MQ=255) cATTGAACGGCAGGAATGTTTTGCAACTGGCGATTTTATCGCGCATGAAATTATTTCTCCGTCCAATTCAATTACAAGAATTACCCGCAGAATCGCCGGACACACTCAAGTTTTCGCGATCCGGTAACTATATCAAt > 1:2718125/1‑137 (MQ=255) cATTGAACGGCAGGAATGTTTTGCAACTGGCGATTTTATCGCGCATGAAATTATTTCTCCGTCCAATTCAATTACAAGAATTACCCGCAGAATCGCCGGACACACTCAAGTTTTCGCGATCCGGTAACTATATCAATGtt > 2:2203426/1‑140 (MQ=255) aTTGAACGGCAGGAATGTTTTGCAACTGGCGATTTTATCGCGCATGAAATTATTTCTCCGTCCAATTCAATTACAAGAATTACCCGCAGAATCGCCGGACACACTCAAGTTTTCGCGATCCGGTAACTATATCAATGTTc > 2:1406009/1‑140 (MQ=255) ttGAACGGCAGGAATGTTTTGCAACTGGCGATTTTATCGCGCATGAAATTATTTCTCCGTCCAATTCAATTACAAGAATTACCCGCAGAATCGCCGGACACACTCAAGTTTTCGCGATCCGGTAACTATATCAATGTTCa > 1:1598625/1‑140 (MQ=255) gCAGGAATGTTTTGCAACTGGCGATTTTATCGCGCATGAAATTATTTCTCCGTCCAATTCAATTACAAGAATTACCCGCAGAATCGCCGGACACACTCAAGTTTTCGCGATCCGGTAACTATATCAATGTTCATAATCCa < 1:2203426/140‑1 (MQ=255) cAGGAATGTTTTGCAACTGGCGATTTTATCGCGCATGAAATTATTTCTCCGTCCAATTCAATTACAAGAATTACCCGCAGAATCGCCGGACACACTCAAGTTTTCGCGATCCGGTAACTATATCAATGTTCATAATCCAt > 1:2532045/1‑140 (MQ=255) gAATGTTTTGCAACTGGCGATTTTATCGCGCATGAAATTATTTCTCCGTCCAATTCAATTACAAGAATTACCCGCAGAATCGCCGGACACACTCAAGTTTTCGCGATCCGGTAACTATATCAATGTTCATAATCCATCAc < 1:2249796/140‑1 (MQ=255) gAATGTTTTGCAACTGGCGATTTTATCGCGCATGAAATTATTTCTCCGTCCAATTCAATTACAAGAATTACCCGCAGAATCGCCGGACACACTCAAGTTTTCGCGATCCGGTAACTATATCAATGTTCATAATCCATCAc < 2:1688062/140‑1 (MQ=255) aTGTTTTGCAACTGGCGATTTTATCGCGCATGAAATTATTTCTCCGTCCAATTCAATTACAAGAATTACCCGCAGAATCGCCGGACACACTCAAGTTTTCGCGATCCGGTAACTATATCAATGTTCATAATCCATCACCt > 1:1036565/1‑140 (MQ=255) ttGCAACTGGCGATTTTATCGCGCATGAAATTATTTCTCCGTCCAATTCAATTACAAGAATTACCCGCAGAATCGCCGGACACACTCAAGTTTTCGCGATCCGGTAACTATATCAATGTTCATAATCCATCACCTTTTTa > 1:1000319/1‑140 (MQ=255) gCAACTGGCGATTTTATCGCGCATGAAATTATTTCTCCGTCCAATTCAATTACAAGAATTACCCGCAGAATCGCCGGACACACTCAAGTTTTCGCGATCCGGTAACTATATCAATGTTCATAATCCATCACCTTTTTATg < 1:1331815/140‑1 (MQ=255) cAACTGGCGATTTTATCGCGCATGAAATTATTTCTCCGTCCAATTCAATTACAAGAATTACCCGCAGAATCGCCGGACACACTCAAGTTTTCGCGATCCGGTAACTATATCAATGTTCATAATCCATCACCTTTTTATGt > 1:1859242/1‑140 (MQ=255) cAACTGGCGATTTTATCGCGCATGAAATTATTTCTCCGTCCAATTCAATTACAAGAATTACCCGCAGAATCGCCGGACACACTCAAGTTTTCGCGATCCGGTAACTATATCAATGTTCATAATCCATCACCTTTTTATGt < 1:2823848/140‑1 (MQ=255) ggCGATTTTATCGCGCATGAAATTATTTCTCCGTCCAATTCAATTACAAGAATTACCCGCAGAATCGCCGGACACACTCAAGTTTTCGCGATCCGGTAACTATATCAATGTTCATAATCCATCACCTTTTTATGTCAccc > 2:2886588/1‑140 (MQ=255) gCGATTTTATCGCGCATGAAATTATTTCTCCGTCCAATTCAATTACAAGAATTACCCGCAGAATCGCCGGACACACTCAAGTTTTCGCGATCCGGTAACTATATCAATGTTCATAATCCATCACCTTTTTATGTCACCCt < 1:636768/140‑1 (MQ=255) aTTTTATCGCGCATGAAATTATTTCTCCGTCCAATTCAATTACAAGAATTACCCGCAGAATCGCCGGACACACTCAAGTTTTCGCGATCCGGTAACTATATCAATGTTCATAATCCATCACCTTTTTATGTCACCCTGGt < 2:1497319/140‑1 (MQ=255) aTTTTATCGCGCATGAAATTATTTCTCCGTCCAATTCAATTACAAGAATTACCCGCAGAATCGCCGGACACACTCAAGTTTTCGCGATCCGGTAACTATATCAATGTTCATAATCCATCACCTTTTTATGTCACCCTGGt < 1:200057/140‑1 (MQ=255) aTTTTATCGCGCATGAAATTATTTCTCCGTCCAATTCAATTACAAGAATTACCCGCAGAATCGCCGGACACACTCAAGTTTTCGCGATCCGGTAACTATATCAATGTTCATAATCCATCACCTTTTTATGTCACCCTGGt < 2:1127058/140‑1 (MQ=255) aTTTTATCGCGCATGAAATTATTTCTCCGTCCAATTCAATTACAAGAATTACCCGCAGAATCGCCGGACACACTCAAGTTTTCGCGATCCGGTAACTATATCAATGTTCATAATCCATCACCTTTTTATGTCACCCTGGt < 1:2439448/140‑1 (MQ=255) aTCGCGCATGAAATTATTTCTCCGTCCAATTCAATTACAAGAATTACCCGCAGAATCGCCGGACACACTCAAGTTTTCGCGATCCGGTAACTATATCAATGTTCATAATCCATCACCTTTTTATGTCACCCTGGTTAACt < 2:1916583/140‑1 (MQ=255) aTCGCGCATGAAATTATTTCTCCGTCCAATTCAATTACAAGAATTACCCGCAGAATCGCCGGACACACTCAAGTTTTCGCGATCCGGTAACTATATCAATGTTCATAATCCATCACCTTTTTATGTCACCCTGGTTAACt < 1:1086835/140‑1 (MQ=255) aTCGCGCATGAAATTATTTCTCCGTCCAATTCAATTACAAGAATTACCCGCAGAATCGCCGGACACACTCAAGTTTTCGCGATCCGGTAACTATATCAATGTTCATAATCCATCACCTTTTTATGTCACCCTGGTTAACt < 1:1182306/140‑1 (MQ=255) aTCGCGCATGAAATTATTTCTCCGTCCAATTCAATTACAAGAATTACCCGCAGAATCGCCGGACACACTCAAGTTTTCGCGATCCGGTAACTATATCAATGTTCATAATCCATCACCTTTTTATGTCACCCTGGTTAACt < 1:982640/140‑1 (MQ=255) cATGAAATTATTTCTCCGTCCAATTCAATTACAAGAATTACCCGCAGAATCGCCGGACACACTCAAGTTTTCGCGATCCGGTAACTATATCAATGTTCATAATCCATCACCTTTTTATGTCACCCTGGTTAACTTACAAg > 2:2395678/1‑140 (MQ=255) aaaTTATTTCTCCGTCCAATTCAATTACAAGAATTACCCGCAGAATCGCCGGACACACTCAAGTTTTCGCGATCCGGTAACTATATCAATGTTCATAATCCATCACCTTTTTATGTCACCCTGGTTAACTTACAAGTggg < 1:2842980/140‑1 (MQ=255) attTCTCCGTCCAATTCAATTACAAGAATTACCCGCAGAATCGCCGGACACACTCAAGTTTTCGCGATCCGGTAACTATATCAATGTTCATAATCCATCACCTTTTTATGTCACCCTGGTTAACTTACAAGTGGGCAGcc < 1:1500659/140‑1 (MQ=255) attTCTCCGTCCAATTCAATTACAAGAATTACCCGCAGAATCGCCGGACACACTCAAGTTTTCGCGATCCGGTAACTATATCAATGTTCATAATCCATCACCTTTTTATGTCACCCTGGTTAACTTACAAGTGGGCAGcc < 2:133037/140‑1 (MQ=255) ttCTCCGTCCAATTCAATTACAAGAATTACCCGCAGAATCGCCGGACACACTCAAGTTTTCGCGATCCGGTAACTATATCAATGTTCATAATCCATCACCTTTTTATGTCACCCTGGTTAACTTACAAGTGGGCAGCCaa > 2:54650/1‑140 (MQ=255) ttCTCCGTCCAATTCAATTACAAGAATTACCCGCAGAATCGCCGGACACACTCAAGTTTTCGCGATCCGGTAACTATATCAATGTTCATAATCCATCACCTTTTTATGTCACCCTGGTTAACTTACAAGTGGGCAGCCaa < 1:34687/140‑1 (MQ=255) tcCGTCCAATTCAATTACAAGAATTACCCGCAGAATCGCCGGACACACTCAAGTTTTCGCGATCCGGTAACTATATCAATGTTCATAATCCATCACCTTTTTATGTCACCCTGGTTAACTTACAAGTGGGCAGCCAAAAg < 2:1859242/140‑1 (MQ=255) ccGTCCAATTCAATTACAAGAATTACCCGCAGAATCGCCGGACACACTCAAGTTTTCGCGATCCGGTAACTATATCAATGTTCATAATCCATCACCTTTTTATGTCACCCTGGTTAACTTACAAGTGGGCAGCCAAAAGt > 2:688694/1‑140 (MQ=255) tCCAATTCAATTACAAGAATTACCCGCAGAATCGCCGGACACACTCAAGTTTTCGCGATCCGGTAACTATATCAATGTTCATAATCCATCACCTTTTTATGTCACCCTGGTTAACTTACAAGTGGGCAGCCAAAAGTTgg > 1:2216745/1‑140 (MQ=255) tCCAATTCAATTACAAGAATTACCCGCAGAATCGCCGGACACACTCAAGTTTTCGCGATCCGGTAACTATATCAATGTTCATAATCCATCACCTTTTTATGTCACCCTGGTTAACTTACAAGTGGGCAGCCAAAAGTTgg > 2:72572/1‑140 (MQ=255) ccAATTCAATTACAAGAATTACCCGCAGAATCGCCGGACACACTCAAGTTTTCGCGATCCGGTAACTATATCAATGTTCATAATCCATCACCTTTTTATGTCACCCTGGTTAACTTACAAGTGGGCAGCCAAAAGTTggg < 2:2189371/140‑1 (MQ=255) caattcaattACAAGAATTACCCGCAGAATCGCCGGACACACTCAAGTTTTCGCGATCCGGTAACTATATCAATGTTCATAATCCATCACCTTTTTATGTCACCCTGGTTAACTTACAAGTGGGCAGCCAAAAGTTgggg < 2:1356104/140‑1 (MQ=255) ttcaattACAAGAATTACCCGCAGAATCGCCGGACACACTCAAGTTTTCGCGATCCGGTAACTATATCAATGTTCATAATCCATCACCTTTTTATGTCACCCTGGTTAACTTACAAGTGGGCAGCCAAAAGTTGGGGAAt > 1:264983/1‑140 (MQ=255) ttcaattACAAGAATTACCCGCAGAATCGCCGGACACACTCAAGTTTTCGCGATCCGGTAACTATATCAATGTTCATAATCCATCACCTTTTTATGTCACCCTGGTTAACTTACAAGTGGGCAGCCAAAAGTTGGGGAAt > 2:1950877/1‑140 (MQ=255) attACAAGAATTACCCGCAGAATCGCCGGACACACTCAAGTTTTCGCGATCCGGTAACTATATCAATGTTCATAATCCATCACCTTTTTATGTCACCCTGGTTAACTTACAAGTGGGCAGCCAAAAGTTGGGGAATGCTa < 2:2100778/140‑1 (MQ=255) cAAGAATTACCCGCAGAATCGCCGGACACACTCAAGTTTTCGCGATCCGGTAACTATATCAATGTTCATAATCCATCACCTTTTTATGTCACCCTGGTTAACTTACAAGTGGGCAGCCAAAAGTTGGGGAATGCTATGGc < 2:264983/140‑1 (MQ=255) aTTACCCGCAGAATCGCCGGACACACTCAAGTTTTCGCGATCCGGTAACTATATCAATGTTCATAATCCATCACCTTTTTATGTCACCCTGGTTAACTTACAAGTGGGCAGCCAAAAGATGGGGAATGCTATGGCTGCAc > 2:2911026/1‑140 (MQ=255) gCAGAATCGCCGGACACACTCAAGTTTTCGCGATCCGGTAACTATATCAATGTTCATAATCCATCACCTTTTTATGTCACCCTGGTTAACTTACAAGTGGGCAGCCAAAAGTTGGGGAATGCTATGGCTGCACCCAGAGt < 1:2270546/140‑1 (MQ=255) | TGTTCTGGATGAATGTTAAGACGATCCCTTCGGTAGATAAAAATGCATTGAACGGCAGGAATGTTTTGCAACTGGCGATTTTATCGCGCATGAAATTATTTCTCCGTCCAATTCAATTACAAGAATTACCCGCAGAAGCGCCGGACACACTCAAGTTTTCGCGATCCGGTAACTATATCAATGTTCATAATCCATCACCTTTTTATGTCACCCTGGTTAACTTACAAGTGGGCAGCCAAAAGTTGGGGAATGCTATGGCTGCACCCAGAGTTAA > NC_000913/559290‑559563 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |