BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,731,942	C→A	T952T (ACC→ACA)	lhr →	putative ATP‑dependent helicase Lhr

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,731,942	0	C	A	100.0%	442.5 / NA	124	T952T (ACC→ACA)	lhr	putative ATP‑dependent helicase Lhr
Reads supporting (aligned to +/- strand): ref base C (0/0); new base A (59/65); total (59/65)

Only 100 of 126 total aligned reads displayed.

CAGGTCGATCCGGGGGAATTACTCGA‑CCCGCAGGTCATTCGCCAGGTGGAAGAAGAGTTGCAACGACTGGCTCCTGGCAGAAGAGCGAAAGGTGAAGAAGGATTGTTCGACCTGCTGCGCGAACTGGGGCCAATGACCGTTGAAGACCTGGCGCAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTAAAACGAATCTTCCCAGCGATGATTAGCGGACAGGAGCGTCTTGCCTGTATGGATGATGC  >  NC_000913/1731805‑1732076

cAGGTCGATCCGGGGGAATTACTCGA‑CCCGCAGGTCATTCGCCAGGTGGAAGAAGAGTTGCAACGACTGGCTCCTGGCAGAAGAGCGAAAGGTGAAGAAGGATTGTTCGACCTGCTGCGCGAACTGGGGCCAATGACAGt                                                                                                                                      >  1:2029008/1‑140 (MQ=255)

cAGGTCGATCCGGGGGAATTACTCGA‑CCCGCAGGTCATTCGCCAGGTGGAAGAAGAGTTGCAACGACTGGCTCCTGGCAGAAGAGCGAAAGGTGAAGAAGGATTGTTCGACCTGCTGCGCGAACTGGGGCCAATGACAGt                                                                                                                                      >  2:132179/1‑140 (MQ=255)

cAGGTCGATCCGGGGGAATTACTCGA‑CCCGCAGGTCATTCGCCAGGTGGAAGAAGAGTTGCAACGACTGGCTCCTGGCAGAAGAGCGAAAGGTGAAGAAGGATTGTTCGACCTGCTGCGCGAACTGGGGCCAATGACAGt                                                                                                                                      >  1:2160473/1‑140 (MQ=255)

cAGGTCGATCCGGGGGAATTACTCGA‑CCCGCAGGTCATTCGCCAGGTGGAAGAAGAGTTGCAACGACTGGCTCCTGGCAGAAGAGCGAAAGGTGAAGAAGGATTGTTCGACCTGCTGCGCGAACTGGGGCCAATGACAGt                                                                                                                                      >  2:432236/1‑140 (MQ=255)

  ggTCGATGCGGGGGAATTACTCGA‑CCCGCAGGTCATTCGCCAGGTGGAAGAAGAGTTGCAACGACTGGCGCCTGGCAGAAGAGCGAAAGGTGAAGAAGGATTGTTCGACCTGCTGCGCGAATTGGGGCCAATGACAGTTg                                                                                                                                    >  2:1852577/1‑140 (MQ=255)

  ggTCGATCCGGGGGAATTACTCGA‑CCCGCAGGTCATTCGCCAGGTGGAAGAAGAGTTGCAACGACTGGCTCCTGGCAGAAGAGCGAAAGGTGAAGAAGGATTGTTCGACCTGCTGCGCGAACTGGGGCCAATGACAGTTg                                                                                                                                    >  1:1942077/1‑140 (MQ=255)

  ggTCGATCCGGGGGAATTACTCGA‑CCCGCAGGTCATTCGCCAGGTGGAAGAAGAGTTGCAACGACTGGCTCCTGGCAGAAGAGCGAAAGGTGAAGAAGGATTGTTCGACCTGCTGCGCGAACTGGGGCCAATGACAGTTg                                                                                                                                    >  2:231517/1‑140 (MQ=255)

  ggTCGATCCGGGGGAATTACTCGA‑CCCGCAGGTCATTCGCCAGGTGGAAGAAGAGTTGCAACGACTGGCTCCTGGCAGAAGAGCGAAAGGTGAAGAAGGATTGTTCGACCTGCTGCGCGAACTGGGGCCAATGACAGTTg                                                                                                                                    <  1:1821030/140‑1 (MQ=255)

  ggTCGATCCGGGGGAATTACTCGA‑CCCGCAGGTCATTCGCCAGGTGGAAGAAGAGTTGCAACGACTGGCTCCTGGCAGAAGAGCGAAAGGTGAAGAAGGATTGTTCGACCTGCTGCGCGAACTGGGGCCAATGACAGTTg                                                                                                                                    <  1:1617386/140‑1 (MQ=255)

  ggTCGATCCGGGGGAATTACTCGA‑CCCGCAGGTCATTCGCCAGGTGGAAGAAGAGTTGCAACGACTGGCTCCTGGCAGAAGAGCGAAAGGTGAAGAAGGATTGTTCGACCTGCTGCGCGAACTGGGGCCAATGACAGTTg                                                                                                                                    >  1:1651774/1‑140 (MQ=255)

   gTCGATCCGGGGGAATTACTCGA‑CCCGCAGGTCATTCGCCAGGTGGAAGAAGAGTTGCAACGACTGGCTCCTGGCAGAAGAGCGAAAGGTGAAGAAGGATTGTTCGACCTGCTGCGCGAACTGGGGCCAATGACAGTTGa                                                                                                                                   >  1:77655/1‑140 (MQ=255)

    tCGATCCGGGGGAATTACTCGA‑CCCGCAGGTCATTCGCCAGGTGGAAGAAGAGTTGCAACGACTGGCTCCTGGCAGAAGAGCGAAAGGTGAAGAAGGATTGTTCGACCTGCTGCGCGAACTGGGGCCAATGACAGTTGaa                                                                                                                                  >  2:1774945/1‑140 (MQ=255)

    tCGATCCGGGGGAATTACTCGA‑CCCGCAGGTCATTCGCCAGGTGGAAGAAGAGTTGCAACGACTGGCTCCTGGCAGAAGAGCGAAAGGCGAAGAAGGATTGTTCGACCTGCTGCGCGAACTGGGGCCAATGACAGTTGaa                                                                                                                                  >  2:1558369/1‑140 (MQ=255)

     cGATCCGGGGGAATTACTCGA‑CCCGCAGGTCATTCGCCAGGTGGAAGAAGAGTTGCAACGACTGGCTCCTGGCAGAAGAGCGAAAGGTGAAGAAGGATTGTTCGACCTGCTGCGCGAACTGGGGCCAATGACAGTTGAAg                                                                                                                                 <  2:2216286/140‑1 (MQ=255)

     cGATCCGGGGGAATTACTCGA‑CCCGCAGGTCATTCGCCAGGTGGAAGAAGAGTTGCAACGACTGGCTCCTGGCAGAAGAGCGAAAGGTGAAGAAGGATTGTTCGACCTGCTGCGCGAACTGGGGCCAATGACAGTTGAAg                                                                                                                                 >  2:1700759/1‑140 (MQ=255)

         ccGGGGGAATTACTCGA‑CCCGCAGGTCATTCGCCAGGTGGAAGAAGAGTTGCAACGACTGGCTCCTGGCAGAAGAGCGAAAGGTGAAGAAGGATTGTTCGACCTGCTGCGCGAACTGGGGCCAATGACAGTTGAAGACCt                                                                                                                             <  2:772461/140‑1 (MQ=255)

             gggAATTACTCGA‑CCCGCAGGTCATTCGCCAGGTGGAAGAAGAGTTGCAACGACTGGCTCCTGGCAGAAGAGCGAAAGGTGAAGAAGGATTGTTCGACCTGCTGCGCGAACTGGGGCCAATGACAGTTGAAGACCTGgcg                                                                                                                         >  1:625778/1‑140 (MQ=255)

              ggAATTACTCGA‑CCCGCAGGTCATTCGCCAGGTGGAAGAAGAGTTGCAACGACTGGCTCCTGGCAGAAGAGCGAAAGGTGAAGAAGGATTGTTCGACCTGCTGCGCGAACTGGGGCCAATGACAGTTGAAGACCTGgcgc                                                                                                                        <  1:2194411/140‑1 (MQ=255)

               gAATTACTCGA‑CCCGCAGGTCATTCGCCAGGTGGAAGAAGAGTTGCAACGACTGGCTCCTGGCAGAAGAGCGAAAGGTGAAGAAGGATTGTTCGACCTGCTGCGCGAACTGGGGCCAATGACAGTTGAAGACCTGGCGCa                                                                                                                       <  1:751579/140‑1 (MQ=255)

               gAATTACTCGA‑CCCGCAGGTCATTCGCCAGGTGGAAGAAGAGTTGCAACGACTGGCTCCTGGCAGAAGAGCGAAAGGTGAAGAAGGATTGTTCGACCTGCTGCGCGAACTGGGGCCAATGACAGTTGAAGACCTGGCGCa                                                                                                                       <  2:1306982/140‑1 (MQ=255)

               gAATTACTCGA‑CCCGCAGGTCATTCGCCAGGTGGAAGAAGAGTTGCAACGACTGGCTCCTGGCAGAAGAGCGAAAGGTGAAGAAGGATTGTTCGACCTGCTGCGCGAACTGGGGCCAATGACAGTTGAAGACCTGGCGCa                                                                                                                       <  2:297986/140‑1 (MQ=255)

                aaTTACTCGACCCCGCAGGTCATTCGCCAGGTGGAAGAAGAGTTGCAACGACTGGCTCCTGGCAGAAGAGCGAAAGGTGAAGAAGGATTGTTCGACCTGCTGCGCGAACTGGGGCCAATGACAGTTGAAGACCTGGCGCa                                                                                                                       <  1:1958276/140‑1 (MQ=255)

                aaTTACTCGA‑CCCGCAGGTCATTCGCCAGGTGGAAGAAGAGTTGCAACGACTGGCTCCTGGCAGAAGAGCGAAAGGTGAAGAAGGATTGTTCGACCTGCTGCGCGAACTGGGGCCAATGACAGTTGAAGACCTGGCGCaa                                                                                                                      <  1:672158/140‑1 (MQ=255)

                aaTTACTCGA‑CCCGCAGGTCATTCGCCAGGTGGAAGAAGAGTTGCAACGACTGGCTCCTGGCAGAAGAGCGAAAGGTGAAGAAGGATTGTTCGACCTGCTGCGCGAACTGGGGCCAATGACAGTTGAAGACCTGGCGCaa                                                                                                                      <  2:2011856/140‑1 (MQ=255)

                 aTTACTCGA‑CCCGCAGGTCATTCGCCAGGTGGAAGAAGAGTTGCAACGACTGGCTCCTGGCAGAAGAGCGAAAGGTGAAGAAGGATTGTTCGACCTGCTGCGCGAACTGGGGCCAATGACAGTTGAAGACCTGGCGCAAc                                                                                                                     >  2:970216/1‑140 (MQ=255)

                 aTTACTCGA‑CCCGCAGGTCATTCGCCAGGTGGAAGAAGAGTTGCAACGACTGGCTCCTGGCAGAAGAGCGAAAGGTGAAGAAGGATTGTTCGACCTGCTGCGCGAACTGGGGCCAATGACAGTTGAAGACCTGGCGCAAc                                                                                                                     <  2:1906540/140‑1 (MQ=255)

                   tACTCGA‑CCCGCAGGTCATTCGCCAGGTGGAAGAAGAGTTGCAACGACTGGCTCCTGGCAGAAGAGCGAAAGGTGAAGAAGGATTGTTCGACCTGCTGCGCGAACTGGGGCCAATGACAGTTGAAGACCTGGCGCAACgg                                                                                                                   <  1:376381/140‑1 (MQ=255)

                    aCTCGA‑CCCGCAGGTCATTCGCCAGGTGGAAGAAGAGTTGCAACGACTGGCTCCTGGCAGAAGAGCGAAAGGTGAAGAAGGATTGTTCGACCTGCTGCGCGAACTGGGGCCAATGACAGTTGAAGACCTGGCGCAACGGc                                                                                                                  <  2:530375/140‑1 (MQ=255)

                      tCGA‑CCCGCAGGTCATTCGCCAGGTGGAAGAAGAGTTGCAACGACTGGCTCCTGGCAGAAGAGCGAAAGGTGAAGAAGGATTGTTCGACCTGCTGCGCGAACTGGGGCCAATGACAGTTGAAGACCTGGCGCAACGGCAt                                                                                                                >  2:816377/1‑140 (MQ=255)

                       cGA‑CCCGCAGGTCATTCGCCAGGTGGAAGAAGAGTTGCAACGACTGGCTCCTGGCAGAAGAGCGAAAGGTGAAGAAGGATTGTTCGACCTGCTGCGCGAACTGGGGCCAATGACAGTTGAAGACCTGGCGCAACGGCATa                                                                                                               <  2:298460/140‑1 (MQ=255)

                        gA‑CCCGCAGGTCATTCGCCAGGTGGAAGAAGAGTTGCAACGACTGGCTCCTGGCAGAAGAGCGAAAGGTGAAGAAGGATTGTTCGACCTGCTGCGCGAACTGGGGCCAATGACAGTTGAAGACCTGGCGCAACGGCATAc                                                                                                              <  1:1995415/140‑1 (MQ=255)

                         a‑CCCGCAGGTCATTCGCCAGGTGGAAGAAGAGTTGCAACGACTGGCTCCTGGCAGAAGAGCGAAAGGTGAAGAAGGATTGTTCGACCTGCTGCGCGAACTGGGGCCAATGACAGTTGAAGACCTGGCGCAACGGCATACa                                                                                                             >  2:1060327/1‑140 (MQ=255)

                           cccGCAGGTCATTCGCCAGGTGGAAGAAGAGTTGCAACGACTGGCTCCTGGCAGAAGAGCGAAAGGTGAAGAAGGATTGTTCGACCTGCTGCGCGAACTGGGGCCAATGACAGTTGAAGACCTGGCGCAACGGCATACAg                                                                                                            >  2:1365233/1‑140 (MQ=255)

                           cccGCAGGTCATTCGCCAGGTGGAAGAAGAGTTGCAACGACTGGCTCCTGGCAGAAGAGCGAAAGGTGAAG‑AGGATTGTTCGACCTGCTGCGCGAACTGGGGCCAATGACAGTTGAAGACCTGGCGCAACGGCATACAgg                                                                                                           >  2:385119/1‑140 (MQ=255)

                            ccGCAGGTCATTCGCCAGGTGGAAGAAGAGTTGCAACGACTGGCTCCTGGCAGAAGAGCGAAAGGTGAAGAAGGATTGTTCGACCTGCTGCGCGAACTGGGGCCAATGACAGTTGAAGACCTGGCGCAACGGCATACAgg                                                                                                           <  2:1145031/140‑1 (MQ=255)

                            ccGCAGGTCATTCGCCAGGTGGAAGAAGAGTTGCAACGACTGGCTCCTGGCAGAAGAGCGAAAGGTGAAGAAGGATTGTTCGACCTGCTGCGCGAACTGGGGCCAATGACAGTTGAAGACCTGGCGCAACGGCATACAgg                                                                                                           <  1:1016106/140‑1 (MQ=255)

                            ccGCAGGTCATTCGCCAGGTGGAAGAAGAGTTGCAACGACTGGCTCCTGGCAGAAGAGCGAAAGGTGAAGAAGGATTGTTCGACCTGCTGCGCGAACTGGGGCCAATGACAGTTGAAGACCTGGCGCAACGGCATACAgg                                                                                                           <  2:1942077/140‑1 (MQ=255)

                              gCAGGTCATTCGCCAGGTGGAAGAAGAGTTGCAACGACTGGCTCCTGGCAGAAGAGCGAAAGGTGAAGAAGGATTGTTCGACCTGCTGCGCGAACTGGGGCCAATGACAGTTGAAGACCTGGCGCAACGGCATACAGgca                                                                                                         <  2:53211/140‑1 (MQ=255)

                              gCAGGTCATTCGCCAGGTGGAAGAAGAGTTGCAACGACTGGCTCCTGGCAGAAGAGCGAAAGGTGAAGAAGGATTGTTCGACCTGCTGCGCGAACTGGGGCCAATGACAGTTGAAGACCTGGCGCAACGGCATACAGgca                                                                                                         <  1:203829/140‑1 (MQ=255)

                               cAGGTCATTCGCCAGGTGGAAGAAGAGTTGCAACGACTGGCTCCTGGCAGAAGAGCGAAAGGTGAAGAAGGATTGTTCGACCTGCTGCGCGAACTGGGGCCAATGACAGTTGAAGACCTGGCGCAACGGCATACAGgcag                                                                                                        <  2:1991724/140‑1 (MQ=255)

                               cAGGTCATTCGCCAGGTGGAAGAAGAGTTGCAACGACTGGCTCCTGGCAGAAGAGCGAAAGGTGAAGAAGGATTGTTCGACCTGCTGCGCGAACTGGGGCCAATGACAGTTGAAGACCTGGCGCAACGGCATACAGgcag                                                                                                        <  2:638467/140‑1 (MQ=255)

                               cAGGTCATTCGCCAGGTGGAAGAAGAGTTGCAACGACTGGCTCCTGGCAGAAGAGCGAAAGGTGAAGAAGGATTGTTCGACCTGCTGCGCGAACTGGGGCCAATGACAGTTGAAGACCTGGCGCAACGGCATACAGgcag                                                                                                        >  1:1919644/1‑140 (MQ=255)

                                     aTTCGCCAGGTGGAAGAAGAGTTGCAACGACTGGCTCCTGGCAGAAGAGCGAAAGGTGAAGAAGGATTGTTCGACCTGCTGCGCGAACTGGGGCCAATGACAGTTGAAGACCTGGCGCAACGGCATACAGGCAGCAGTGa                                                                                                  >  2:800221/1‑140 (MQ=255)

                                            aGGTGGAAGAAGAGTTGCAACGACTGGCTCCTGGCAGAAGAGCGAAAGGTGAAGAAGGATTGTTCGACCTGCTGCGCGAACTGGGGCCAATGACAGTTGAAGACCTGGCGCAACGGCATACAGGCAGCAGTGAAGAgg                                                                                             >  1:424776/1‑138 (MQ=255)

                                            aGGTGGAAGAAGAGTTGCAACGACTGGCTCCTGGCAGAAGAGCGAAAGGTGAAGAAGGATTGTTCGACCTGCTGCGCGAACTGGGGCCAATGACAGTTGAAGACCTGGCGCAACGGCATACAGGCAGCAGTGAAGAgg                                                                                             <  2:424776/138‑1 (MQ=255)

                                             ggTGGAAGAAGAGTTGCAACGACTGGCTCCTGGCAGAAGAGCGAAAGGTGAAGAAGGATTGTTCGACCTGCTGCGCGAACTGGGGCCAATGACAGTTGAAGACCTGGCGCAACGGCATACAGGCAGCAGTGAAGAGGTTg                                                                                          >  2:766337/1‑140 (MQ=255)

                                              gTGGAAGAAGAGTTGCAACGACTGGCTCCTGGCAGAAGAGCGAAAGGTGAAGAAGGATTGTTCGACCTGCTGCGCGAACTGGGGCCAATGACAGTTGAAGACCTGGCGCAACGGCATACAGGCAGCAGTGAAGAGGTTGc                                                                                         >  1:615255/1‑140 (MQ=255)

                                              gTGGAAGAAGAGTTGCAACGACTGGCTCCTGGCAGAAGAGCGAAAGGTGAAGAAGGATTGTTCGACCTGCTGCGCGAACTGGGGCCAATGACAGTTGAAGACCTGGCGCAACGGCATACAGGCAGCAGTGAAGAGGTTGc                                                                                         >  1:494672/1‑140 (MQ=255)

                                                 gaagaaGAGTTGCAACGACTGGCTCCTGGCAGAAGAGCGAAAGGTGAAGAAGGATTGTTCGACCTGCTGCGCGAACTGGGGCCAATGACAGTTGAAGACCTGGCGCAACGGCATACAGGCAGCAGTGAAGAGGTTGcgtc                                                                                      >  2:165847/1‑140 (MQ=255)

                                                     aagaGTTGCAACGACTGGCTCCTGGCAGAAGAGCGAAAGGTGAAG‑AGGATTGTTCGACCTGCTGCGCGAACTGGGGCCAATGACAGTTGAAGACCTGGCGCAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATc                                                                                 <  1:385119/140‑1 (MQ=255)

                                                        agTTGCAACGACTGGCTCCTGGCAGAAGAGCGAAAGGTGAAGAAGGATTGTTCGACCTGCTGCGCGAACTGGGGCCAATGACAGTTGAAGACCTGGCGCAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTg                                                                               >  2:32264/1‑140 (MQ=255)

                                                         gTTGCAACGACTGGCTCCTGGCAGAAGAGCGAAAGGTGAAGAAGGATTGTTCGACCTGCTGCGCGAACTGGGGCCAATGACAGTTGAAGACCTGGCGCAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTgg                                                                              >  2:1531353/1‑140 (MQ=255)

                                                            gCAACGACTGGCTCCTGGCAGAAGAGCGAAAGGTGAAGAAGGATTGTTCGACCTGCTGCGCGAACTGGGGCCAATGACAGTTGAAGACCTGGCGCAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGaaa                                                                           >  1:294590/1‑140 (MQ=255)

                                                            gCAACGACTGGCTCCTGGCAGAAGAGCGAAAGGTGAAGAAGGATTGTTCGACCTGCTGCGCGAACTGGGGCCAATGACAGTTGAAGACCTGGCGCAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGaaa                                                                           >  2:957893/1‑140 (MQ=255)

                                                            gCAACGACTGGCTCCTGGCAGAAGAGCGAAAGGTGAAGAAGGATTGTTCGACCTGCTGCGCGAACTGGGGCCAATGACAGTTGAAGACCTGGCGCAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGaaa                                                                           >  1:1770262/1‑140 (MQ=255)

                                                                     ggCTCCTGGCAGAAGAGCGAAAGGTGAAGAAGGATTGTTCGACCTGCTGCGCGAACTGGGGCCAATGACAGTTGAAGACCTGGCGCAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTg                                                                  <  1:1197615/140‑1 (MQ=255)

                                                                      gCTCCTGGCAGAAGAGCGAAAGGTGAAGAAGGATTGTTCGACCTGCTGCGCGAACTGGGGCCAATGACAGTTGAAGACCTGGCGCAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGc                                                                 >  2:431540/1‑140 (MQ=255)

                                                                       cTCCTGGCAGAAGAGCGAAAGGTGAAGAAGGATTGTTCGACCTGCTGCGCGAACTGGGGCCAATGACAGTTGAAGACCTGGCGCAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCa                                                                <  2:350086/140‑1 (MQ=255)

                                                                            ggCAGAAGAGCGAAAGGTGAAGAAGGATTGTTCGACCTGCTGCGCGAACTGGGGCCAATGACAGTTGAAGACCTGGCGCAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTaaa                                                           >  2:1191430/1‑140 (MQ=255)

                                                                            ggCAGAAGAGCGAAAGGTGAAGAAGGATTGTTCGACCTGCTGCGCGAACTGGGGCCAATGACAGTTGAAGACCTGGCGCAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTaaa                                                           >  1:997154/1‑140 (MQ=255)

                                                                             gCAGAAGAGCGAAAGGTGAAGAAGGATTGTTCGACCTGCTGCGCGAACTGGGGCCAATGACAGTTGAAGACCTGGCGCAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTaaaa                                                          >  1:1429904/1‑140 (MQ=255)

                                                                             gCAGAAGAGCGAAAGGTGAAGAAGGATTGTTCGACCTGCTGCGCGAACTGGGGCCAATGACAGTTGAAGACCTGGCGCAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTaaaa                                                          <  1:432236/140‑1 (MQ=255)

                                                                                  agagCGAAAGGTGAAGAAGGATTGTTCGACCTGCTGCGCGAACTGGGGCCAATGACAGTTGAAGACCTGGCGCAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTAAAACGAAt                                                     <  1:957893/140‑1 (MQ=255)

                                                                                  agagCGAAAGGTGAAGAAGGATTGTTCGACCTGCTGCGCGAACTGGGGCCAATGACAGTTGAAGACCTGGCGCAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTAAAACGAAt                                                     <  1:1700759/140‑1 (MQ=255)

                                                                                     gCGAAAGGTGAAGAAGGATTGTTCGACCTGCTGCGCGAACTGGGGCCAATGACAGTTGAAGACCTGGCGCAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTAAAACGAATCtt                                                  <  1:1070788/140‑1 (MQ=255)

                                                                                      cGAAAGGTGAAGAAGGATTGTTCGACCTGCTGCGCGAACTGGGGCCAATGACAGTTGAAGACCTGGCGCAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTAAAACGAATCTTc                                                 >  1:1231664/1‑140 (MQ=255)

                                                                                       gAAAGGTGAAGAAGGATTGTTCGACCTGCTGCGCGAACTGGGGCCAATGACAGTTGAAGACCTGGCGCAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTAAAACGAATCTTcc                                                <  1:1099802/140‑1 (MQ=255)

                                                                                            gTGAAGAAGGATTGTTCGACCTGCTGCGCGAACTGGGGCCAATGACAGTTGAAGACCTGGCGCAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTAAAACGAATCTTCCCAGCg                                           <  1:1454360/140‑1 (MQ=255)

                                                                                                agaagGATTGTTCGACCTGCTGCGCGAACTGGGGCCAATGACAGTTGAAGACCTGGCGCAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTAAAACGAATCTTCCCAGCgatga                                       >  1:913869/1‑140 (MQ=255)

                                                                                                 gaagGATTGTTCGACCTGCTGCGCGAACTGGGGCCAATGACAGTTGAAGACCTGGCGCAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTAAAACGAATCTTCCCAGCgatgat                                      <  2:2160473/140‑1 (MQ=255)

                                                                                                   agGATTGTTCGACCTGCTGCGCGAACTGGGGCCAATGACAGTTGAAGACCTGGCGCAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTAAAACGAATCTTCCCAGCGATGATTa                                    <  1:399313/140‑1 (MQ=255)

                                                                                                    ggATTGTTCGACCTGCTGCGCGAACTGGGGCCAATGACAGTTGAAGACCTGGCGCAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTAAAACGAATCTTCCCAGCGATGATTAg                                   <  1:1543773/140‑1 (MQ=255)

                                                                                                      aTTGTTCGACCTGCTGCGCGAACTGGGGCCAATGACAGTTGAAGACCTGGCGCAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTAAAACGAATCTTCCCAGCGATGATTAGCg                                 >  2:1372428/1‑140 (MQ=255)

                                                                                                       ttGTTCGACCTGCTGCGCGAACTGGGGCCAATGACAGTTGAAGACCTGGCGCAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTAAAACGAATCTTCCCAGCGATGATTAGCgg                                >  1:157786/1‑140 (MQ=255)

                                                                                                       ttGTTCGACCTGCTGCGCGAACTGAGGCCAATGACAGTTGAAGACCTGGCGCAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTAAAACGAATCTTCCCAGCGATGATTAGCgg                                >  2:2011485/1‑140 (MQ=255)

                                                                                                         gTTCGACCTGCTGCGCGAACTGGGGCCAATGACAGTTGAAGACCTGGCGCAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTAAAACGAATCTTCCCAGCGATGATTAGCGGAc                              >  2:1300587/1‑140 (MQ=255)

                                                                                                          ttCGACCTGCTGCGCGAACTGGGGCCAATGACAGTTGAAGACCTGGCGCAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTAAAACGAATCTTCCCAGCGATGATTAGCGGACa                             >  1:1301886/1‑140 (MQ=255)

                                                                                                            cGACCTGCTGCGCGAACTGGGGCCAATGACAGTTGAAGACCTGGCGCAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTAAAACGAATCTTCCCAGCGATGATTAGCGGACAgg                           >  2:2043860/1‑140 (MQ=255)

                                                                                                            cGACCTGCTGCGCGAACTGGGGCCAATGACAGTTGAAGACCTGGCGCAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTAAAACGAATCTTCCCAGCGATGATTAGCGGACAgg                           <  1:1911370/140‑1 (MQ=255)

                                                                                                             gACCTGCTGCGCGAACTGGGGCCAATGACAGTTGAAGACCTGGCGCAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTAAAACGAATCTTCCCAGCGATGATTAGCGGACAGGa                          <  2:1651774/140‑1 (MQ=255)

                                                                                                             gACCTGCTGCGCGAACTGGGGCCAATGACAGTTGAAGACCTGGCGCAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTAAAACGAATCTTCCCAGCGATGATTAGCGGACAGGa                          <  1:770897/140‑1 (MQ=255)

                                                                                                               ccTGCTGCGCGAACTGGGGCCAATGACAGTTGAAGACCTGGCGCAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTAAAACGAATCTTCCCAGCGATGATTAGCGGACAGGAGc                        >  2:964695/1‑140 (MQ=255)

                                                                                                               ccTGCTGCGCGAACTGGGGCCAATGACAGTTGAAGACCTGGCGCAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTAAAACGAATCTTCCCAGCGATGATTAGCGGACAGGAGc                        >  1:492117/1‑140 (MQ=255)

                                                                                                                 tgctgcGCGAACTGGGGCCAATGACAGTTGAAGACCTGGCGCAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTAAAACGAATCTTCCCAGCGATGATTAGCGGACAGGAGCGt                      <  1:1190981/140‑1 (MQ=255)

                                                                                                                  gctgcGCGAACTGGGGCCAATGACAGTTGAAGACCTGGCGCAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTAAAACGAATCTTCCCAGCGATGATTAGCGGACAGGAGCGTc                     <  1:1060327/140‑1 (MQ=255)

                                                                                                                    tgcGCGAACTGGGGCCAATGACAGTTGAAGACCTGGCGCAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTAAAACGAATCTTCCCAGCGATGATTAGCGGACAGGAGCGTCtt                   >  2:586982/1‑140 (MQ=255)

                                                                                                                    tgcGCGAACTGGGGCCAATGACAGTTGAAGACCTGGCGCAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTAAAACGAATCTTCCCAGCGATGATTAGCGGACAGGAGCGTCtt                   <  1:1774945/140‑1 (MQ=255)

                                                                                                                     gcgcGAACTGGGGCCAATGACAGTTGAAGACCTGGCGCAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTAAAACGAATCTTCCCAGCGATGATTAGCGGACAGGAGCGTCTTg                  <  2:1818294/140‑1 (MQ=255)

                                                                                                                     gcgcGAACTGGGGCCAATGACAGTTGAAGACCTGGCGCAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTAAAACGAATCTT‑‑CAGCGATGATTAGCGGACAGGAGCGTCTTGcc                <  2:294590/140‑1 (MQ=255)

                                                                                                                      cgcgAACTGGGGCCAATGACAGTTGAAGACCTGGCGCAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTAAAACGAATCTTCCCAGCGATGATTAGCGGACAGGAGCGTCTTGc                 <  1:1273096/140‑1 (MQ=255)

                                                                                                                      cgcgAACTGGGGCCAATGACAGTTGAAGACCTGGCGCAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTAAAACGAATCTTCCCAGCGATGATTAGCGGACAGGAGCGTCTTGc                 <  2:2029008/140‑1 (MQ=255)

                                                                                                                      cgcgAACTGGGGCCAATGACAGTTGAAGACCTGGCGCAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTAAAACGAATCTTCCCAGCGATGATTAGCGGACAGGAGCGTCTTGc                 >  1:743820/1‑140 (MQ=255)

                                                                                                                      cgcgAACTGGGGCCAATGACAGTTGAAGACCTGGCGCAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTAAAACGAATCTTCCCAGCGATGATTAGCGGACAGGAGCGTCTTGc                 <  1:636351/140‑1 (MQ=255)

                                                                                                                      cgcgAACTGGGGCCAATGACAGTTGAAGACCTGGCGCAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTAAAACGAATCTTCCCAGCGATGATTAGCGGACAGGAGCGTCTTGc                 <  1:310007/140‑1 (MQ=255)

                                                                                                                        cgAACTGGGGCCAATGACAGTTGAAGACCTGGCGCAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTAAAACGAATCTTCCCAGCGATGATTAGCGGACAGGAGCGTCTTGCCt               >  1:350968/1‑140 (MQ=255)

                                                                                                                          aaCTGGGGCCAATGACAGTTGAAGACCTGGCGCAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTAAAACGAATCTTCCCAGCGATGATTAGCGGACAGGAGCGTCTTGCCTGt             <  2:350968/140‑1 (MQ=255)

                                                                                                                                 gCCAATGACAGTTGAAGACCTGGCGCAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTAAAACGAATCTTCCCAGCGATGATTAGCGGACAGGAGCGTCTTGCCTGTATGgatg      <  1:1762419/140‑1 (MQ=255)

                                                                                                                                  ccAATGACAGTTGAAGACCTGGCGCAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTAAAACGAATCTTCCCAGCGATGATTAGCGGACAGGAGCGTCTTGCCTGTATGgatga     <  2:1334496/140‑1 (MQ=255)

                                                                                                                                    aaTGACAGTTGAAGACCTGGCGCAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTAAAACGAATCTTCCCAGCGATGATTAGCGGACAGGAGCGTCTTGCCTGTATGGatgatg   <  2:1060938/140‑1 (MQ=255)

                                                                                                                                     aTGACAGTTGAAGACCTGGCGCAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTAAAACGAATCTTCCCAGCGATGATTAGCGGACAGGAGCGTCTTGCCTGTATGGATGATgc  >  2:418420/1‑140 (MQ=255)

CAGGTCGATCCGGGGGAATTACTCGA‑CCCGCAGGTCATTCGCCAGGTGGAAGAAGAGTTGCAACGACTGGCTCCTGGCAGAAGAGCGAAAGGTGAAGAAGGATTGTTCGACCTGCTGCGCGAACTGGGGCCAATGACCGTTGAAGACCTGGCGCAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTAAAACGAATCTTCCCAGCGATGATTAGCGGACAGGAGCGTCTTGCCTGTATGGATGATGC  >  NC_000913/1731805‑1732076

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`