BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,340,227	C→A	A99S (GCC→TCC)	adiA ←	arginine decarboxylase, degradative

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,340,227	0	C	A	100.0%	371.7 / NA	103	A99S (GCC→TCC)	adiA	arginine decarboxylase, degradative
Reads supporting (aligned to +/- strand): ref base C (0/0); new base A (43/60); total (43/60)

Only 100 of 111 total aligned reads displayed.

GCTGAACAGTGGCGGCAACAGCTGCTGGCGGTAGCGGGTCATCGCGGCAACGGCGCGTCCGGCGATAAAGTCGGCGGTATCTTCCAGAATCCAGGCGAATTCATCGACAAGCTCCAGCAGGTCGCGATCCATTGCGGCGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAAGCTTA‑CCGATCAATTGTCTGACGTTTTGATGTTCGTCCGGATGTTCCATTTGATAGCTGAACATCAGGCAGTCAAT  >  NC_000913/4340090‑4340362

gcTGAACAGTGGCGGCAACAGCTGCTGGCGGTAGCGGGTCATCGCGGCAACGGCGCGTCCGGCGATAAAGTCGGCGGTATCTTCCAGAATCCAGGCGAATTCATCGACAAGCTCCAGCAGGTCGCGATCCATTGCGgaga                                                                                                                                        <  2:2145783/140‑1 (MQ=255)

 cTGAACAGTGGCGGCAACAGCTGCTGGCGGTAGCGGGTCATCGCGGCAACGGCGCGTCCGGCGATAAAGTCGGCGGTATCTTCCAGAATCCAGGCGAATTCATCGACAAGCTCCAGCAGGTCGCGATCCATTGCGGagag                                                                                                                                       <  1:1419907/140‑1 (MQ=255)

         tGGCGGCAACAGCTGCTGGCGGTAGCGGGTCATCGCGGCAACGGCGCGTCCGGCGATAAAGTCGGCGGTATCTTCCAGAATCCAGGCGAATTCATCGACAAGCTCCAGCAGGTCGCGATCCATTGCGGAGAGGGCttttt                                                                                                                               >  1:230662/1‑140 (MQ=255)

         tGGCGGCAACAGCTGCTGGCGGTAGCGGGTCATCGCGGCAACGGCGCGGCCGGGGGTAAAGTCGGCGGGATCTTCCCGAAACCCGGCGAATTCATCCACCAGCTCCAGCCGGGCGCGATCCCTTTCGGGGAGGGCctttt                                                                                                                               >  2:318721/1‑140 (MQ=255)

         tGGCGGCAACAGCTGCTGGCGGTAGCGGGGCATCGCGGCAACGGCGCGTCCGGCGATAAAGTCGGGGGGATCTTCCAGAATCCAGGCGAATTCATCGACAAGCTCCAGGAGGGCGCGAACCACTGCGGGGAGGGGctttt                                                                                                                               >  2:65968/1‑140 (MQ=255)

           gcggcAACAGCTGCTGGCGGTAGCGGGTCATCGCGGCAACGGCGCGTCCGGCGATAAAGTCGGCGGTATCTTCCAGAATCCAGGCGAATTCATCGACAAGCTCCAGCAGGTCGCGATCCATTGCGGAGAGGGCTTTTTcc                                                                                                                             >  2:360764/1‑140 (MQ=255)

            cggcAACAGCTGCTGGCGGTAGCGGGGCATCGCGGCAACGGCGCGTCCCGCGATAAAGTCGGCGGGATCTTCCAGAATCCAGGCGAATTCATCGACAAGCTCCAGCAAGTCGCGATCCATTGCGGAGAGGGCTTTTTccc                                                                                                                            >  2:156082/1‑140 (MQ=255)

              gcAACAGCTGCTGGCGGTAGCGGGTCATCGCGGGAACGGCGCGTCCGGCGATAAAGTCGGCGGTATCTTCCAGAATCCAGGCGAATTCATCGACAAGCTCCAGCAGGTCGCGATCCATTGCGGAGAGGGCTTTTTCCCGa                                                                                                                          >  1:158575/1‑140 (MQ=255)

              gcAACAGCTGCTGGCGGTAGCGGGTCATCGCGGCAACGGGGCGTCCGGCGATAAAGTCGGCGGTATCTTCCAGAATCCAGGCGAATTCATCGACAAACTCCAGCAGGTCGCGATCCATTGCGGAGAGGGCTTTTTTCCGa                                                                                                                          >  2:2156816/1‑140 (MQ=255)

               cAACAGCTGCTGGCGGTAGCGGGTCATCGCGGCAACGGCGCGTCCGGCGATAAAGTCGGCGGTATCTTCCAGAATCCAGGCGAATTCATCGACAAGCTCCAGCAGGTCGCGATCCATTGCGGAGAGGGCTTTTTCCCGAt                                                                                                                         <  2:183043/140‑1 (MQ=255)

                  cAGCTGCTGGCGGTAGCGGGTCATCGCGGCAACGGCGCGTCCGGCGATAAAGTCGGCGGTATCTTCCAGAATCCAGGCGAATTCATCGACAAGCTCCAGCAGGTCGCGATCCATTGCGGAGAGGGCTTTTTCCCGATCGc                                                                                                                      <  1:1893094/140‑1 (MQ=255)

                  cAGCTGCTGGCGGTAGCGGGTCATCGCGGCAACGGCGCGTCCGGCGATAAAGTCGGCGGTATCTTCCAGAATCCAGGCGAATTCATCGACAAGCTCCAGCAGGTCGCGATCCATTGCGGAGAGGGCTTTTTCCCGATCGc                                                                                                                      <  1:1758613/140‑1 (MQ=255)

                   aGCTGCTGGCGGTAGCGGGTCATCGCGGCAACGGCGCGTCCGGCGATAAAGTCGGCGGTATCTTCCAGAATCCAGGCGAATTCATCGACAAGCTCCAGCAGGTCGCGATCCATTGCGGAGAGGGCTTTTTCCCGATCGcc                                                                                                                     >  1:1933491/1‑140 (MQ=255)

                   aGCTGCTGGCGGTAGCGGGTCATCGCGGCAACGGCGCGTCCGGCGATAAAGTCGGCGGTATCTTCCAGAATCCAGGCGAATTCATCGACAAGCTCCAGCAGGTCGCGATCCATTGCGGAGAGGGCTTTTTCCCGATCGcc                                                                                                                     >  1:198115/1‑140 (MQ=255)

                   aGCTGCTGGCGGTAGCGGGTCATCGCGGCAACGGCGCGTCCGGCGATAAAGTCGGCGGTATCTTCCAGAATCCAGGCGAATTCATCGACAAGCTCCAGCAGGTCGCGATCCATTGCGGAGAGGGCTTTTTCCCGATCGcc                                                                                                                     <  1:2158573/140‑1 (MQ=255)

                    gctgctGGCGGTAGCGGGTCATCGCGGCAACGGCGCGTCCGGCGATAAAGTCGGCGGTATCTTCCAGAATCCAGGCGAATTCATCGACAAGCTCCAGCAGGTCGCGATCCATTGCGGAGAGGGCTTTTTCCCGATCGccc                                                                                                                    <  2:1816012/140‑1 (MQ=255)

                    gctgctGGCGGTAGCGGGTCATCGCGGCAACGGCGCGTCCGGCGATAAAGTCGGCGGTATCTTCCAGAATCCAGGCGAATTCATCGACAAGCTCCAGCAGGTCGCGATCCATTGCGGAGAGGGCTTTTTCCCGATCGccc                                                                                                                    <  2:928738/140‑1 (MQ=255)

                     ctgctgGCGGTAGCGGGTCATCGCGGCAACGGCGCGTCCGGCGATAAAGTCGGCGGTATCTTCCAGAATCCAGGCGAATTCATCGACAAGCTCCAGCAGGTCGCGATCCATTGCGGAGAGGGCTTTTTCCCGATCGCCCa                                                                                                                   <  1:1140267/140‑1 (MQ=255)

                        ctgGCGGTAGCGGGTCATCGCGGCAACGGCGCGTCCAGCGATAAAGTCGGCGGTATCTTCCAGAATCCAGGCGAATTCATCGACAAGCTCCAGCAGGTCGCGATCCATTGCGGAGAGGGCTTTTTCCCGATCGCCCAACa                                                                                                                >  1:972912/1‑140 (MQ=255)

                           gCGGTAGCGGGTCATCGCGGCAACGGCGCGTCCGGCGATAAAGTCGGCGGTATCTTCCAGAATCCAGGCGAATTCATCGACAAGCTCCAGCAGGTCGCGATCCATTGCGGAGAGGGCTTTTTCCCGATCGCCCAACAGGa                                                                                                             >  1:2167623/1‑140 (MQ=255)

                                     gTCATCGCGGCAACGGCGCGTCCGGCGATAAAGTCGGCGGTATCTTCCAGAATCCAGGCGAATTCATCGACAAGCTCCAGCAGGTCGCGATCCATTGCGGAGAGGGCTTTTTCCCGATCGCCCAACAGGAAGATCGGCAc                                                                                                   >  1:670087/1‑140 (MQ=255)

                                     gTCATCGCGGCAACGGCGCGTCCGGCGATAAAGTCGGCGGTATCTTCCAGAATCCAGGCGAATTCATCGACAAGCTCCAGCAGGTCGCGATCCATTGCGGAGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCAc                                                                                                   >  1:1878581/1‑140 (MQ=255)

                                     gTCATCGCGGCAACGGCGCGTCCGGCGATAAAGTCGGCGGTATCTTCCAGAATCCAGGCGAATTCATCGACAAGCTCCAGCAGGTCGCGATCCATTGCGGAGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCAc                                                                                                   >  2:751209/1‑140 (MQ=255)

                                            cgGCAACGGCGCGTCCGGCGATAAAGTCGGCGGTATCTTCCAGAATCCAGGCGAATTCATCGACAAGCTCCAGCAGGTCGCGATCCATTGCGGAGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTttgt                                                                                            <  1:807161/140‑1 (MQ=255)

                                               cAACGGCGCGTCCGGCGATAAAGTCGGCGGTATCTTCCAGAATCCAGGCGAATTCATCGACAAGCTCCAGCAGGTCGCGATCCATTGCGGAGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTgg                                                                                         <  1:237608/140‑1 (MQ=255)

                                               cAACGGCGCGTCCGGCGATAAAGTCGGCGGTATCTTCCAGAATCCAGGCGAATTCATCGACAAGCTCCAGCAGGTCGCGATCCATTGCGGAGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTgg                                                                                         <  1:1810409/140‑1 (MQ=255)

                                                aaCGGCGCGTCCGGCGATAAAGTCGGCGGTATCTTCCAGAATCCAGGCGAATTCATCGACAAGCTCCAGCAGGTCGCGATCCATTGCGGAGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGgc                                                                                        >  1:468138/1‑140 (MQ=255)

                                                 aCGGCGCGTCCGGCGATAAAGTCGGCGGTATCTTCCAGAATCCAGGCGAATTCATCGACAAGCTCCAGCAGGTCGCGATCCATTGCGGAGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGgcg                                                                                       <  2:1654893/140‑1 (MQ=255)

                                                 aCGGCGCGTCCGGCGATAAAGTCGGCGGTATCTTCCAGAATCCAGGCGAATTCATCGACAAGCTCCAGCAGGTCGCGATCCATTGCGGAGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGgcg                                                                                       <  2:1301929/140‑1 (MQ=255)

                                                 aCGGCGCGTCCGGCGATAAAGTCGGCGGTATCTTCCAGAATCCAGGCGAATTCATCGACAAGCTCCAGCAGGTCGCGATCCATTGCGGAGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGgcg                                                                                       >  2:867584/1‑140 (MQ=255)

                                                 aCGGCGCGTCCGGCGATAAAGTCGGCGGTATCTTCCAGAATCCAGGCGAATTCATCGACAAGCTCCAGCAGGTCGCGATCCATTGCGGAGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGgcg                                                                                       <  1:360764/140‑1 (MQ=255)

                                                 aCGGCGCGTCCGGCGATAAAGTCGGCGGTATCTTCCAGAATCCAGGCGAATTCATCGACAAGCTCCAGCAGGTCGCGATCCATTGCGGAGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGgcg                                                                                       <  1:1709535/140‑1 (MQ=255)

                                                  cGGCGCGTCCGGCGATAAAGTCGGCGGTATCTTCCAGAATCCAGGCGAATTCATCGACAAGCTCCAGCAGGTCGCGATCCATTGCGGAGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGgcgc                                                                                      <  1:1548316/140‑1 (MQ=255)

                                                    gcgcGTCCGGCGATAAAGTCGGCGGTATCTTCCAGAATCCAGGCGAATTCATCGACAAGCTCCAGCAGGTCGCGATCCATTGCGGAGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTc                                                                                    <  2:1823746/140‑1 (MQ=255)

                                                     cgcgTCCGGCGATAAAGTCGGCGGTATCTTCCAGAATCCAGGCGAATTCATCGACAAGCTCCAGCAGGTCGCGATCCATTGCGGAGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCa                                                                                   <  1:1784201/140‑1 (MQ=255)

                                                      gcgTCCGGCGATAAAGTCGGCGGTATCTTCCAGAATCCAGGCGAATTCATCGACAAGCTCCAGCAGGTCGCGATCCATTGCGGAGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCAt                                                                                  <  2:1746081/140‑1 (MQ=255)

                                                       cgTCCGGCGATAAAGTCGGCGGTATCTTCCAGAATCCAGGCGAATTCATCGACAAGCTCCAGCAGGTCGTGATCCATTGCGGAGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATg                                                                                 <  1:1234768/140‑1 (MQ=255)

                                                       cgTCCGGCGATAAAGTCGGCGGTATCTTCCAGAATCCAGGCGAATTCATCGACAAGCTCCAGCAGGTCGCGATCCATTGCGGAGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATg                                                                                 >  2:1427544/1‑140 (MQ=255)

                                                       cgTCCGGCGATAAAGTCGGCGGTATCTTCCAGAATCCAGGCGAATTCATCGACAAGCTCCAGCAGGTCGCGATCCATTGCGGAGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATg                                                                                 <  1:1928113/140‑1 (MQ=255)

                                                            ggCGATAAAGTCGGCGGTATCTTCCAGAATCCAGGCGAATTCATCGACAAGCTCCAGCAGGTCGCGATCCATTGCGGAGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAAGCt                                                                            <  1:1963192/140‑1 (MQ=255)

                                                            ggCGATAAAGTCGGCGGTATCTTCCAGAATCCAGGCGAATTCATCGACAAGCTCCAGCAGGTCGCGATCCATTGCGGAGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAAGCt                                                                            <  1:1504099/140‑1 (MQ=255)

                                                            ggCGATAAAGTCGGCGGTATCTTCCAGAATCCAGGCGAATTCATCGACAAGCTCCAGCAGGTCGCGATCCATTGCGGAGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAAGCt                                                                            >  2:78844/1‑140 (MQ=255)

                                                              cGATAAAGTCGGCGGTATCTTCCAGAATCCAGGCGAATTCATCGACAAGCTCCAGCAGGTCGCGATCCATTGCGGAGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAAGCTTa                                                                          <  1:1325571/140‑1 (MQ=255)

                                                              cGATAAAGTCGGCGGTATCTTCCAGAATCCAGGCGAATTCATCGACAAGCTCCAGCAGGTCGCGATCCATTGCGGAGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAAGCTTa                                                                          <  1:684277/140‑1 (MQ=255)

                                                               gATAAAGTCGGCGGTATCTTCCAGAATCCAGGCGAATTCATCGACAAGCTCCAGCAGGTCGCGATCCATTGCGGAGAGGACTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAAGCTTA‑c                                                                        <  1:952789/140‑1 (MQ=255)

                                                                aTAAAGTCGGCGGTATCTTCCAGAATCCAGGCGAATTCATCGACAAGCTCCAGCAGGTCGCGATCCATTGCGGAGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAAGCTTA‑cc                                                                       <  1:492691/140‑1 (MQ=255)

                                                                   aaGTCGGCGGTATCTTCCAGAATCCAGGCGAATTCATCGACAAGCTCCAGCAGGTCGCGATCCATTGCGGAGAGGGCTTTTTCCTGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAAGCTTA‑CCGAt                                                                    <  1:866229/140‑1 (MQ=255)

                                                                   aaGTCGGCGGTATCTTCCAGAATCCAGGCGAATTCATCGACAAGCTCCAGCAGGTCGCGATCCATTGCGGAGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAAGCTTA‑CCGAt                                                                    <  1:867584/140‑1 (MQ=255)

                                                                        ggcggTATCTTCCAGAATCCAGGCGAATTCATCGACAAGCTCCAGCAGGTCGCGATCCATTGCGGAGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAAGCTTA‑CCGATCAAtt                                                               >  2:371797/1‑140 (MQ=255)

                                                                           ggTATCTTCCAGAATCCAGGCGAATTCATCGACAAGCTCCAGCAGGTCGCGATCCATTGCGGAGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAAGCTTA‑CCGATCAATTGTc                                                            <  1:411937/140‑1 (MQ=255)

                                                                           ggTATCTTCCAGAATCCAGGCGAATTCATCGACAAGCTCCAGCAGGTCGCGATCCATTGCGGAGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAAGCTTA‑CCGATCAATTGTc                                                            <  1:1217340/140‑1 (MQ=255)

                                                                             tATCTTCCAGAATCCAGGCGAATTCATCGACAAGCTCCAGCAGGTCGCGATCCATTGCGGAGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAAGCTTA‑CCGATCAATTGTCTg                                                          >  2:558054/1‑140 (MQ=255)

                                                                                 ttCCAGAATCCAGGCGAATTCATCGACAAGCTCCAGCAGGTCGCGATCCATTGCGGAGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAAGCTTA‑CCGATCAATTGTCTGACGt                                                      <  2:1259748/140‑1 (MQ=255)

                                                                                  tCCAGAATCCAGGCGAATTCATCGACAAGCTCCAGCAGGTCGCGATCCATTGCGGAGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAAGCTTA‑CCGATCAATTGTCTGACGtt                                                     <  1:518709/140‑1 (MQ=255)

                                                                                    cAGAATCCAGGCGAATTCATCGACAAGCTCCAGCAGGTCGCGATCCATTGCGGAGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAAGCTTA‑CCGATCa                                                                  <  1:1138772/125‑1 (MQ=255)

                                                                                    cAGAATCCAGGCGAATTCATCGACAAGCTCCAGCAGGTCGCGATCCATTGCGGAGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAAGCTTA‑CCGATCa                                                                  >  2:1138772/1‑125 (MQ=255)

                                                                                       aaTCCAGGCGAATTCATCGACAAGCTCCAGCAGGTCGCGATCCATTGCGGAGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAAGCTTA‑CCGATCAATTGTCTGACGTTTTGAt                                                >  1:2050801/1‑140 (MQ=255)

                                                                                       aaTCCAGGCGAATTCATCGACAAGCTCCAGCAGGTCGCGATCCATTGCGGAGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAAGCTTA‑CCGATCAATTGTCTGACGTTTTGAt                                                >  2:1576563/1‑140 (MQ=255)

                                                                                       aaTCCAGGCGAATTCATCGACAAGCTCCAGCAGGTCGCGATCCATTGCGGAGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAAGCTTA‑CCGATCAATTGTCTGACGTTTTGAt                                                <  1:371797/140‑1 (MQ=255)

                                                                                        aTCCAGGCGAATTCATCGACAAGCTCCAGCAGGTCGCGATCCATTGCGGAGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAAGCTTA‑CCGATCAATTGTCTGACGTTTTGATg                                               <  1:1611509/140‑1 (MQ=255)

                                                                                         tCCAGGCGAATTCATCGACAAGCTCCAGCAGGTCGCGATCCATTGCGGAGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAAGCTTA‑CCGATCAATTGTCTGACGTTTTGATGt                                              >  1:1919674/1‑140 (MQ=255)

                                                                                         tCCAGGCGAATTCATCGACAAGCTCCAGCAGGTCGCGATCCATTGCGGAGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAAGCTTA‑CCGATCAATTGTCTGACGTTTTGATGt                                              >  1:1338726/1‑140 (MQ=255)

                                                                                         tCCAGGCGAATTCATCGACAAGCTCCAGCAGGTCGCGATCCATTGCGGAGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAAGCTTA‑CCGATCAATTGTCTGACGTTTTGATGt                                              >  2:1634301/1‑140 (MQ=255)

                                                                                           cAGGCGAATTCATCGACAAGCTCCAGCAGGTCGCGATCCATTGCGGAGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAAGCTTA‑CCGATCAATTGTCTGACGTTTTGATGTTc                                            >  2:2088559/1‑140 (MQ=255)

                                                                                               cGAATTCATCGACAAGCTCCAGCAGGTCGCGATCCATTGCGGAGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAAGC‑TA‑CCGATCAATTGTCTGACGTTTTGATGTTCGTCCg                                       <  1:187386/140‑1 (MQ=255)

                                                                                                gAATTCATCGACAAGCTCCAGCAGGTCGCGATCCATTGCGGAGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAAGCTTA‑CCGATCAATTGTCTGACGTTTTGATGTTCGTCCg                                       <  1:1388936/140‑1 (MQ=255)

                                                                                                 aaTTCATCGACAAGCTCCAGCAGGTCGCGATCCATTGCGGAGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAAGCTTA‑CCGATCAATTGTCTGACGTTTTGATGTTCGTCCgg                                      <  2:1671631/140‑1 (MQ=255)

                                                                                                   ttCATCGACAAGCTCCAGCAGGTCGCGATCCATTGCGGAGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAAGCTTA‑CCGATCAATTGTCTGACGTTTTGATGt                                              <  1:341112/130‑1 (MQ=255)

                                                                                                   ttCATCGACAAGCTCCAGCAGGTCGCGATCCATTGCGGAGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAAGCTTA‑CCGATCAATTGTCTGACGTTTTGATGt                                              >  2:341112/1‑130 (MQ=255)

                                                                                                    tCATCGACAAGCTCCAGCAGGTCGCGATCCATTGCGGAGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAAGCTTA‑CCGATCAATTGTCTGACGTTTTGATGTTCGTCCGGATg                                   <  1:316146/140‑1 (MQ=255)

                                                                                                    tCATCGACAAGCTCCAGCAGGTCGCGATCCATTGCGGAGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAAGCTTA‑CCGATCAATTGTCTGACGTTTTGATGTTCGTCCGGATg                                   <  2:612782/140‑1 (MQ=255)

                                                                                                    tCATCGACAAGCTCCAGCAGGTCGCGATCCATTGCGGAGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAAGCTTA‑CCGATCAATTGTCTGACGTTTTGATGTTCGTCCGGATg                                   <  1:1010873/140‑1 (MQ=255)

                                                                                                    tCATCGACAAGCTCCAGCAGGTCGCGATCCATTGCGGAGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAAGCTTA‑CCGATCAATTGTCTGACGTTTTGATGTTCGTCCGGATg                                   <  2:728700/140‑1 (MQ=255)

                                                                                                       tCGACAAGCTCCAGCAGGTCGCGATCCATTGCGGAGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAAGCTTA‑CCGATCAATTGTCTGACGTTTTGATGTTCGTCCGGATGTTc                                <  1:1563721/140‑1 (MQ=255)

                                                                                                           cAAGCTCCAGCAGGTCGCGATCCATTGCGGAGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAAGCTTA‑CCGATCAATTGTCTGACGTTTTGATGTTCGTCCGGATGTTCCAtt                            >  1:797699/1‑140 (MQ=255)

                                                                                                            aaGCTCCAGCAGGTCGCGATCCATTGCGGAGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAAGCTTA‑CCGATCAATTGTCTGACGTTTTGATGTTCGTCCGGATGTTCCAttt                           >  2:1738695/1‑140 (MQ=255)

                                                                                                            aaGCTCCAGCAGGTCGCGATCCATTGCGGAGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAAGCTTA‑CCGATCAATTGTCTGACGTTTTGATGTTCGTCCGGATGTTCCAttt                           >  2:1134836/1‑140 (MQ=255)

                                                                                                             aGCTCCAGCAGGTCGCGATCCATTGCGGAGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAAGCTTA‑CCGATCAATTGTCTGACGTTTTGATGTTCGTCCGGATGTTCCATTTg                          <  1:78844/140‑1 (MQ=255)

                                                                                                              gCTCCAGCAGGTCGCGATCCATTGCGGAGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAAGCTTA‑CCGATCAATTGTCTGACGTTTTGATGTTCGTCCGGATGTTCCATTTGa                         <  1:215468/140‑1 (MQ=255)

                                                                                                              gCTCCAGCAGGTCGCGATCCATTGCGGAGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAAGCTTA‑CCGATCAATTGTCTGACGTTTTGATGTTCGTCCGGATGTTCCATTTGa                         >  2:261646/1‑140 (MQ=255)

                                                                                                              gCTCCAGCAGGTCGCGATCCATTGCGGAGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAAGCTTA‑CCGATCAATTGTCTGACGTTTTGATGTTCGTCCGGATGTTCCATTTGa                         <  1:1548274/140‑1 (MQ=255)

                                                                                                              gCTCCAGCAGGTCGCGATCCATTGCGGAGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAAGCTTA‑CCGATCAATTGTCTGACGTTTTGATGTTCGTCCGGATGTTCCATTTGa                         <  1:1457197/140‑1 (MQ=255)

                                                                                                               cTCCAGCAGGTCGCGATCCATTGCGGAGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAAGCTTA‑CCGATCAATTGTCTGACGTTTTGATGTTCGTCCGGATGTTCCATTTGAt                        >  2:463675/1‑140 (MQ=255)

                                                                                                                   agcagGTCGCGATCCATTGCGGAGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAAGCTTA‑CCGATCAATTGTCTGACGTTTTGATGTTCGTCCGGATGTTCCATTTGATAGCt                    <  1:322004/140‑1 (MQ=255)

                                                                                                                   agcagGTCGCGATCCATTGCGGAGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAAGCTTA‑CCGATCAATTGTCTGACGTTTTGATGTTCGTCCGGATGTTCCATTTGATAGCt                    <  1:1595342/140‑1 (MQ=255)

                                                                                                                    gcagGTCGCGATCCATTGCGGAGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAAGCTTACCCGATCAATTGTCTGACGTTTTGATGTTCGTCCGGATGTTCCATTTGATAGCt                    <  1:323850/140‑1 (MQ=255)

                                                                                                                        gTCGCGATCCATTGCGGAGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAAGCTTA‑CCGATCAATTGTCTGACGTTTTGATGTTCGTCCGGATGTTCCATTTGATAGCTGAACa               >  1:1778860/1‑140 (MQ=255)

                                                                                                                         tCGCGATCCATTGCGGAGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAAGCTTA‑CCGATCAATTGTCTGACGTTTTGATGTTCGTCCGGATGTTCCATTTGATAGCTGAACAt              >  1:686585/1‑140 (MQ=255)

                                                                                                                          cgcgATCCATTGCGGAGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAAGCTTA‑CCGATCAATTGTCTGACGTTTTGATGTTCGTCCGGATGTTCCATTTGATAGCTGAACATc             >  2:506317/1‑140 (MQ=255)

                                                                                                                          cgcgATCCATTGCGGAGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAAGCTTA‑CCGATCAATTGTCTGACGTTTTGATGTTCGTCCGGATGTTCCATTTGATAGCTGAACATc             >  2:515069/1‑140 (MQ=255)

                                                                                                                          cgcgATCCATTGCGGAGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAAGCTTA‑CCGATCAATTGTCTGACGTTTTGATGTTCGTCCGGATGTTCCATTTGATAGCTGAACATc             <  2:1845522/140‑1 (MQ=255)

                                                                                                                          cgcgATCCATTGCGGAGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAAGCTTA‑CCGATCAATTGTCTGACGTTTTGATGTTCGTCCGGATGTTCCATTTGATAGCTGAACATc             >  2:1549878/1‑140 (MQ=255)

                                                                                                                          cgcgATCCATTGCGGAGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAAGCTTA‑CCGATCAATTGTCTGACGTTTTGATGTTCGTCCGGATGTTCCATTTGATAGCTGAACATc             >  2:841719/1‑140 (MQ=255)

                                                                                                                          cgcgATCCATTGCGGAGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAAGCTTA‑CCGATCAATTGTCTGACGTTTTGATGTTCGTCCGGATGTTCCATTTGATAGCTGAACATc             >  1:350948/1‑140 (MQ=255)

                                                                                                                            cgATCCATTGCGGAGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAAGCTTA‑CCGATCAATTGTCTGACGTTTTGATGTTCGTCCGGATGTTCCATTTGATAGCTGAACATCAg           >  1:1272381/1‑140 (MQ=255)

                                                                                                                             gATCCATTGCGGAGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAAGCTTA‑CCGATCAATTGTCTGACGTTTTGATGTTCGTCCGGATGTTCCATTTGATAGCTGAACATCAgg          <  1:28352/140‑1 (MQ=255)

                                                                                                                             gATCCATTGCGGAGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAAGCTTA‑CCGATCAATTGTCTGACGTTTTGATGTTCGTCCGGATGTTCCATTTGATAGCTGAACATCAgg          <  1:463675/140‑1 (MQ=255)

                                                                                                                                  aTTGCGGAGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAAGCTTA‑CCGATCAATTGTCTGACGTTTTGATGTTCGTCCGGATGTTCCATTTGATAGCTGAACATCAGGCAGTc     >  2:2201569/1‑140 (MQ=255)

                                                                                                                                    tGCGGAGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAAGCTTA‑CCGATCAATTGTCTGACGTTTTGATGTTCGTCCGGATGTTCCATTTGATAGCTGAACATCAGGCAGTCaa   >  1:468625/1‑140 (MQ=255)

                                                                                                                                     gcggagAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAAGCTTA‑CCGATCAATTGTCTGACGTTTTGATGTTCGTCCGGATGTTCCATTTGATAGCTGAACATCAGGCAGTCAAt  <  1:558054/140‑1 (MQ=255)

GCTGAACAGTGGCGGCAACAGCTGCTGGCGGTAGCGGGTCATCGCGGCAACGGCGCGTCCGGCGATAAAGTCGGCGGTATCTTCCAGAATCCAGGCGAATTCATCGACAAGCTCCAGCAGGTCGCGATCCATTGCGGCGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAAGCTTA‑CCGATCAATTGTCTGACGTTTTGATGTTCGTCCGGATGTTCCATTTGATAGCTGAACATCAGGCAGTCAAT  >  NC_000913/4340090‑4340362

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`