| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,530,005 | C→A | G80V (GGC→GTC) | sgcC ← | putative PTS enzyme IIC component SgcC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,530,005 | 0 | C | A | 97.8% | 321.1 / ‑0.6 | 91 | G80V (GGC→GTC) | sgcC | putative PTS enzyme IIC component SgcC |
| Reads supporting (aligned to +/- strand): ref base C (1/1); new base A (45/44); total (46/45) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 | |||||||||||
GTAGTGCCAGTAATTGTAAATATCGACGTTCATCGTTTTGGTCAGACGGGTGACCAGCATGGCGACATTGAGAAGAAAAATAACTGGGATAATCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGCCTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGATCACCAGTCCCATACCGACAAAACCAATCCCAACCGTTACCCCTG > NC_000913/4529869‑4530140 | gTAGTGCCAGTAATTGTAAATATCGACGTTCATCGTTTTGGTCAGACGGGTGACCAGCATGGCGACATTGAGAAGAAAAATAACTGGGATAATCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGACTg > 2:172855/1‑140 (MQ=255)gTAGTGCCAGTAATTGTAAATATCGACGTTCATCGTTTTGGTCAGACGGGTGACCAGCATGGCGACATTGAGAAGAAAAATAACTGGGATAATCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGACTg > 1:229988/1‑140 (MQ=255) aGTGCCAGTAATTGTAAATATCGACGTTCATCGTTTTGGTCAGACGGGTGACCAGCATGGCGACATTGAGAAGAAAAATAACTGGGATAATCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGACTgcg > 1:548845/1‑140 (MQ=255) aGTGCCAGTAATTGTAAATATCGACGTTCATCGTTTTGGTCAGACGGGTGACCAGCATGGCGACATTGAGAAGAAAAATAACTGGGATAATCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGACTgcg > 1:1300608/1‑140 (MQ=255) aGTGCCAGTAATTGTAAATATCGACGTTCATCGTTTTGGTCAGACGGGTGACCAGCATGGCGACATTGAGAAGAAAAATAACTGGGATAATCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGACTgcg > 1:146734/1‑140 (MQ=255) gTGCCAGTAATTGTAAATATCGACGTTCATCGTTTTGGTCAGACGGGTGACCAGCATGGCGACATTGAGAAGAAAAATAACTGGGATAATCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGACTgcgc < 1:790948/140‑1 (MQ=255) tGCCAGTAATTGTAAATATCGACGTTCATCGTTTTGGTCAGACGGGTGACCAGCATGGCGACATTGAGAAGAAAAATAACTGGGATAATCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGACTGCGcc > 1:65269/1‑140 (MQ=255) tGCCAGTAATTGTAAATATCGACGTTCATCGTTTTGGTCAGACGGGTGACCAGCATGGCGACATTGAGAAGAAAAATAACTGGGATAATCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGACTGCGcc < 1:669213/140‑1 (MQ=255) gCCAGTAATTGTAAATATCGACGTTCATCGTTTTGGTCAGACGGGTGACCAGCATGGCGACATTGAGAAGAAAAATAACTGGGATAATCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGACTGCGCCa < 2:428957/140‑1 (MQ=255) aGTAATTGTAAATATCGACGTTCATCGTTTTGGTCAGACGGGTGACCAGCATGGCGACATTGAGAAGAAAAATAACTGGGATAATCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGACTGCGCCAACg > 2:912419/1‑140 (MQ=255) aGTAATTGTAAATATCGACGTTCATCGTTTTGGTCAGACGGGTGACCAGCATGGCGACATTGAGAAGAAAAATAACTGGGATAATCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGACTGCGCCAACg > 1:263801/1‑140 (MQ=255) tGTAAATATCGACGTTCATCGTTTTGGTCAGACGGGTGACCAGCATGGCGACATTGAGAAGAAAAATAACTGGGATAATCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGACTGCGCCAACGTCAAAg > 1:804012/1‑140 (MQ=255) tGTAAATATCGACGTTCATCGTTTTGGTCAGACGGGTGACCAGCATGGCGACATTGAGAAGAAAAATAACTGGGATAATCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGACTGCGCCAACGTCAAAg > 2:1184546/1‑140 (MQ=255) tGTAAATATCGACGTTCATCGTTTTGGTCAGACGGGTGACCAGCATGGCGACATTGAGAAGAAAAATAACTGGGATAATCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGACTGCGCCAACGTCAAAg < 1:655581/140‑1 (MQ=255) tGTAAATATCGACGTTCATCGTTTTGGTCAGACGGGTGACCAGCATGGCGACATTGAGAAGAAAAATAACTGGGATAATCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGACTGCGCCAACGTCAAAg > 2:8875/1‑140 (MQ=255) gTAAATATCGACGTTCATCGTTTTGGTCAGACGGGTGACCAGCATGGCGACATTGAGAAGAAAAATAACTGGGATAATCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGACTGCGCCAACGTCAAAGa < 1:1300243/140‑1 (MQ=255) tAAATATCGACGTTCATCGTTTTGGTCAGACGGGTGACCAGCATGGCGACATTGAGAAGAAAAATAACTGGGATAATCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGACTGCGCCAACGTCAAAGAc > 2:590178/1‑140 (MQ=255) aaTATCGACGTTCATCGTTTTGGTCAGACGGGTGACCAGCATGGCGACATTGAGAAGAAAAATAACTGGGATAATCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGACTGCGCCAACGTCAAAGACAt > 2:745059/1‑140 (MQ=255) atatCGACGTTCATCGTTTTGGTCAGACGGGTGACCAGCATGGCGACATTGAGAAGAAAAATAACTGGGATAATCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGACTGCGCCAACGTCAAAGACATg < 2:985136/140‑1 (MQ=255) atatCGACGTTCATCGTTTTGGTCAGACGGGTGACCAGCATGGCGACATTGAGAAGAAAAATAACTGGGATAATCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGACTGCGCCAACGTCAAAGACATg < 1:1097932/140‑1 (MQ=255) atCGACGTTCATCGTTTTGGTCAGACGGGTGACCAGCATGGCGACATTGAGAAGAAAAATAACTGGGATAATCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGACTGCGCCAACGTCAAAGACATGCa < 1:912419/140‑1 (MQ=255) gACGTTCATCGTTTTGGTCAGACGGGTGACCAGCATGGCGACATTGAGAAGAAAAATAACTGGGATAATCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGACTGCGCCAACGTCAAAGACATGCAggg < 2:1300608/140‑1 (MQ=255) gACGTTCATCGTTTTGGTCAGACGGGTGACCAGCATGGCGACATTGAGAAGAAAAATAACTGGGATAATCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGACTGCGCCAACGTCAAAGACATGCAggg < 2:848051/140‑1 (MQ=255) gACGTTCATCGTTTTGGTCAGACGGGTGACCAGCATGGCGACATTGAGAAGAAAAATAACTGGGATAATCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGACTGCGCCAACGTCAAAGACATGCAggg < 2:745336/140‑1 (MQ=255) gACGTTCATCGTTTTGGTCAGACGGGTGACCAGCATGGCGACATTGAGAAGAAAAATAACTGGGATAATCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGACTGCGCCAACGTCAAAGACATGCAggg > 2:274120/1‑140 (MQ=255) gACGTTCATCGTTTTGGTCAGACGGGTGACCAGCATGGCGACATTGAGAAGAAAAATAACTGGGATAATCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGACTGCGCCAACGTCAAAGACATGCAggg < 2:352885/140‑1 (MQ=255) cGTTCATCGTTTTGGTCAGACGGGTGACCAGCATGGCGACATTGAGAAGAAAAATAACTGGGATAATCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGACTGCGCCAACGTCAAAGACATGCAGGGCt > 1:865739/1‑140 (MQ=255) cGTTCATCGTTTTGGTCAGACGGGTGACCAGCATGGCGACATTGAGAAGAAAAATAACTGGGATAATCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGACTGCGCCAACGTCAAAGACATGCAGGGCt > 1:665406/1‑140 (MQ=255) cGTTCATCGTTTTGGTCAGACGGGTGACCAGCATGGCGACATTGAGAAGAAAAATAACTGGGATAATCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGACTGCGCCAACGTCAAAGACATGCAGGGCt > 1:349876/1‑140 (MQ=255) ttCATCGTTTTGGTCAGACGGGTGACCAGCATGGCGACATTGAGAAGAAAAATAACTGGGATAATCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGACTGCGCCAACGTCAAAGACATGCAGGGCTAg > 1:946780/1‑140 (MQ=255) cATCGTTTTGGTCAGACGGGTGACCAGCATGGCGACATTGAGAAGAAAAATAACTGGGATAATCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGACTGCGCCAACGTCAAAGACATGCAGGGCTAGGc > 1:94543/1‑140 (MQ=255) gTTTTGGTCAGACGGGTGACCAGCATGGCGACATTGAGAAGAAAAATAACTGGGATAATCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGACTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGaa < 2:1189406/140‑1 (MQ=255) ttGGTCAGACGGGTGACCAGCATGGCGACATTGAGAAGAAAAATAACTGGGATAATCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGACTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACg > 2:669527/1‑140 (MQ=255) ggTCAGACGGGTGACCAGCATGGCGACATTGAGAAGAAAAATAACTGGGATAATCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGACTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCt > 2:855716/1‑140 (MQ=255) gACGGGTGACCAGCATGGCGACATTGAGAAGAAAAATAACTGGGATAATCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGACTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAatc < 1:14623/140‑1 (MQ=255) aCGGGTGACCAGCATGGCGACATTGAGAAGAAAAATAACTGGGATAATCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGACTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAatca < 1:1298424/140‑1 (MQ=255) aCGGGTGACCAGCATGGCGACATTGAGAAGAAAAATAACTGGGATAATCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGACTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAatca < 1:1020534/140‑1 (MQ=255) aCGGGTGACCAGCATGGCGACATTGAGAAGAAAAATAACTGGGATAATCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGACTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAatca < 2:932391/140‑1 (MQ=255) cGGGTGACCAGCATGGCGACATTGAGAAGAAAAATAACTGGGATAATCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGACTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAatcat < 2:1280137/140‑1 (MQ=255) ggTGACCAGCATGGCGACATTGAGAAGAAAAATAACTGGGATAATCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGACTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAAtcatca < 2:349876/140‑1 (MQ=255) ggTGACCAGCATGGCGACATTGAGAAGAAAAATAACTGGGATAATCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGACTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAAtcatca < 1:272726/140‑1 (MQ=255) tGACCAGCATGGCGACATTGAGAAGAAAAATAACTGGGATAATCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGACTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAATCATCACt > 2:421666/1‑140 (MQ=255) tGACCAGCATGGCGACATTGAGAAGAAAAATAACTGGGATAATCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGACTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAATCATCACt > 2:1112576/1‑140 (MQ=255) aGCATGGCGACATTGAGAAGAAAAATAACTGGGATAATCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGACTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAATCATCACTTTGAt > 1:328754/1‑140 (MQ=255) aTGGCGACATTGAGAAGAAAAATAACTGGGATAATCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGACTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAATCATCACTTTGATAgg < 2:554343/140‑1 (MQ=255) tGGCGACATTGAGAAGAAAAATAACTGGGATAATCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGACTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAATCATCACTTTGATAggg > 1:136800/1‑140 (MQ=255) cGACATTGAGAAGAAAAATAACTGGGATAATCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGACTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAATCATCACTTTGATAGGGGGa > 1:1121046/1‑140 (MQ=255) aCATTGAGAAGAAAAATAACTGGGATAATCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGACTGGGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAATCATCACTTTGATAgg < 2:349871/134‑1 (MQ=255) aCATTGAGAAGAAAAATAACTGGGATAATCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGACTGGGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAATCATCACTTTGATAgg > 1:349871/1‑134 (MQ=255) gaagaaAAATAACTGGGATAATCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGACTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTg > 1:217197/1‑140 (MQ=255) aagaaAAATAACTGGGATAATCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGACTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGt > 2:1265710/1‑140 (MQ=255) aaaaTAACTGGGATAATCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGACTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGAt < 1:975198/140‑1 (MQ=255) aaCTGGGATAATCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGACTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCa < 1:464733/140‑1 (MQ=255) gggATAATCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGCCTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAATCATCACTTTGATAGAGGGACTGAGGCTGTCGATCGCCATGAc > 2:567714/1‑140 (MQ=255) gggATAATCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGACTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGAc > 2:304494/1‑140 (MQ=255) ggATAATCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGACTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACg < 2:413797/140‑1 (MQ=255) ggATAATCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGACTGCGCCAACGTCAAAGACATGCAGGGCTACGGCGAAACGCTCAATCATCTCTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACg < 1:959113/140‑1 (MQ=255) aTCATGGCGCCAATGGCTGTGGCATAACCAACGCCGGAGGCAGGGACTGCGCCAACGTCAAAGGCATGCAGGGCTAGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGATCAc < 2:672006/140‑1 (MQ=255) aTCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGCCTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGATCAc < 2:706300/140‑1 (MQ=255) aTCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGACTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGATCAc > 2:1099122/1‑140 (MQ=255) aTCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGACTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGATCAc < 2:667057/140‑1 (MQ=255) aTCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGACTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGATCAc < 2:65269/140‑1 (MQ=255) aTCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGACTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGATCAc < 2:568122/140‑1 (MQ=255) aTCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGACTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGATCAc < 2:946780/140‑1 (MQ=255) aTCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGACTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGATCAc < 1:745059/140‑1 (MQ=255) aTCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGACTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGATCAc > 1:447883/1‑140 (MQ=255) aTCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGACTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGATCAc < 2:328754/140‑1 (MQ=255) aTCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGACTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGATCAc < 1:773660/140‑1 (MQ=255) ggCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGACTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACg < 2:407310/130‑1 (MQ=255) ggCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGACTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACg > 1:407310/1‑130 (MQ=255) ggCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGACTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGATCACCAGTc > 2:192364/1‑140 (MQ=255) ggCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGACTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGATCACCAGTc > 2:186171/1‑140 (MQ=255) ggCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGACTGCGCCAACGTCAAAAACATGCAGGGCTAGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGATCACCAGTc > 1:622257/1‑140 (MQ=255) gcgcCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGACTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGATCACCAGTcc > 1:125801/1‑140 (MQ=255) gcgcCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGACTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGATCACCAGTcc > 2:60938/1‑140 (MQ=255) cgcCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGACTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGATCACCAGTccc > 1:816355/1‑140 (MQ=255) gCATAACCAACGCCGGAGGCAGGGACTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGATCACCAGTCCCATACCGACAAAAcc < 2:80385/140‑1 (MQ=255) tAACCAACGCCGGAGGCAGGGACTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGATCACCAGTCCCATACCGACAAAACCAAt > 2:535439/1‑140 (MQ=255) aCCAACGCCGGAGGCAGGGACTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGATCACCAGTCCCATACCGACAAAACCAATcc > 2:906931/1‑140 (MQ=255) ccAACGCCGGAGGCAGGGACTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGATCACCAGTCCCATACCGACAAAACCAATccc < 1:62274/140‑1 (MQ=255) ccAACGCCGGAGGCAGGGACTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGATCACCAGTCCCATACCGACAAAACCAATccc < 1:1099122/140‑1 (MQ=255) ccAACGCCGGAGGCAGGGACTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGATCACCAGTCCCATACCGACAAAACCAATccc < 2:1006361/140‑1 (MQ=255) ccAACGCCGGAGGCAGGGACTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGATCACCAGTCCCATACCGACAAAACCAATccc < 1:855716/140‑1 (MQ=255) cAACGCCGGAGGCAGGGACTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGATCACCAGTCCCATACCGGCAAAACCAATCCCa < 2:665406/140‑1 (MQ=255) cAACGCCGGAGGCAGGGACTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGATCACCAGTCCCATACCGACAAAACCAATCCCa < 2:1121046/140‑1 (MQ=255) aCGCCGGAGGCAGGGACTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGATCACCAGTCCCATACCGACAAAACCAATCCCAAc > 2:546133/1‑140 (MQ=255) cGCCGGAGGCAGGGACTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGATCACCAGTCCCATACCGACAAAACCAATCCCAAcc > 2:62095/1‑140 (MQ=255) cGCCGGAGGCAGGGACTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGATCACCAGTCCCATACCGACAAAACCAATCCCAAcc > 2:952868/1‑140 (MQ=255) gCCGGAGGCAGGGACTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGATCACCAGTCCCATACCGACAAAACCAATCCCAACCg > 1:369411/1‑140 (MQ=255) ccGGAGGCAGGGACTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGATCACCAGTCCCATACCGACAAAACCAATCCCAACCGt < 2:548845/140‑1 (MQ=255) aGGCAGGGACTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGATCACCAGTCCCATACCGACAAAACCAATCCCAACCGTTAcc < 2:217197/140‑1 (MQ=255) aGGGACTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGATCACCAGTCCCATACCGACAAAACCAATCCCAACCGTTACCCCTg < 1:8875/140‑1 (MQ=255) | GTAGTGCCAGTAATTGTAAATATCGACGTTCATCGTTTTGGTCAGACGGGTGACCAGCATGGCGACATTGAGAAGAAAAATAACTGGGATAATCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGCCTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGATCACCAGTCCCATACCGACAAAACCAATCCCAACCGTTACCCCTG > NC_000913/4529869‑4530140 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |