Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,058,863 C→A L260L (CTC→CTA torC → cytochrome c menaquinol dehydrogenase TorC

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,058,8630CA97.1% 225.5 / 0.4 69L260L (CTC→CTAtorCcytochrome c menaquinol dehydrogenase TorC
Reads supporting (aligned to +/- strand):  ref base C (1/1);  new base A (33/34);  total (34/35)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.32e-01

GCGGCGAAAGGCGATAAAGAAGCCTCTGGTTCTCTGCTGCCTGCTTCGGAAGTGAAAGTCCTTAAACGTGACGGCGACTGGCTGCAAATTGAAATTACCGGCTGGACGGAAAGCGCCGGACGTCAGCGTGTACTCACCCAATTCCCAGGTAAACGCATCTTTGTTGCCTCGATTCGTGGTGATGT‑‑‑GCAGCAGCAGGTAAAAACGCTGGAGAAAACCACCGTTGCCGACACCAATACCGAGTGGAGCAAGTTGCAGGCCACTGCGTGGATG  >  NC_000913/1058729‑1058998
                                                                                                                                      |                                                                                                                                          
gcggcgAAAGGCGATAAAGAAGCCTCTGGTTCTCTGCTGCCTGCTTCGGAAGTGAAAGTCCTTAAACGTGACGGCGACTGGCTGCAAATTGAAATTACCGGCTGGACGGAAAGCGCCGGACGTCAGCGTGTACTAACCCa                                                                                                                                       <  2:950749/140‑1 (MQ=255)
    cgAAAGGCGATAAAGAAGCCTCTGGTTCTCTGCTGCCTGCTTCGGAAGTGAAAGTCCTTAAACGTGACGGCGACTGGCTGCAAATTGAAATTACCGGCTGGACGGAAAGCGCCGGACGTCAGCGTGTACTAACCCAATTc                                                                                                                                   >  1:810231/1‑140 (MQ=255)
                 agaagCCTCTGGTTCTCTGCTGCCTGCTTCGGAAGTGAAAGTCCTTAAACGTGACGGCGACTGGCTGCAAATTGAAATTACCGGCTGGACGGAAAGCGCCGGACGTCAGCGTGTACTAACCCAATTCCCAGGTAAACGCa                                                                                                                      <  2:596643/140‑1 (MQ=255)
                  gaagCCTCTGGTTCTCTGCTGCCTGCTTCGGAAGTGAAAGTCCTTAAACGTGACGGCGACTGGCTGCAAATTGAAATTACCGGCTGGACGGAAAGCGCCGGACGTCAGCGTGTACTAACCCAATTCCCAGGTAAACGCAt                                                                                                                     <  2:545805/140‑1 (MQ=255)
                    agCCTCTGGTTCTCTGCTGCCTGCTTCGGAAGTGAAAGTCCTTAAACGTGACGGCGACTGGCTGCAAATTGAAATTACCGGCTGGACGGAAAGCGCCGGACGTCAGCGTGTACTAACCCAATTCCCAGGTAAACGCATCt                                                                                                                   >  2:410177/1‑140 (MQ=255)
                     gCCTCTGGTTCTCTGCTGCCTGCTTCGGAAGTGAAAGTCCTTAAACGTGACGGCGACTGGCTGCAAATTGAAATTACCGGCTGGACGGAAAGCGCCGGACGTCAGCGTGTACTAACCCAATTCCCAGGTAAACGCATCtt                                                                                                                  >  1:1245570/1‑140 (MQ=255)
                     gCCTCTGGTTCTCTGCTGCCTGCTTCGGAAGTGAAAGTCCTTAAACGTGACGGCGACTGGCTGCAAATTGAAATTACCGGCTGGACGGAAAGCGCCGGACGTCAGCGTGTACTAACCCAATTCCCAGGTAAACGCATCtt                                                                                                                  >  1:869647/1‑140 (MQ=255)
                      ccTCTGGTTCTCTGCTGCCTGCTTCGGAAGTGAAAGTCCTTAAACGTGACGGCGACTGGCTGCAAATTGAAATTACCGGCTGGACGGAAAGCGCCGGACGTCAGCGTGTACTAACCCAATTCCCAGGTAAACGCATCttt                                                                                                                 >  2:1118103/1‑140 (MQ=255)
                          tGGTTCTCTGCTGCCTGCTTCGGAAGTGAAAGTCCTTAAACGTGACGGCGACTGGCTGCAAATTGAAATTACCGGCTGGACGGAAAGCGCCGGACGTCAGCGTGTACTAACCCAATTCCCAGGTAAACGCATCTttgttg                                                                                                             >  2:620498/1‑140 (MQ=255)
                            gTTCTCTGCTGCCTGCTTCGGAAGTGAAAGTCCTTAAACGTGACGGCGACTGGCTGCAAATTGAAATTACCGGCTGGACGGAAAGCGCCGGACGTCAGCGTGTACTAACCCAATTCCCAGGTAAACGCATCTTTGTTGcc                                                                                                           <  2:705495/140‑1 (MQ=255)
                             ttCTCTGCTGCCTGCTTCGGAAGTGAAAGTCCTTAAACGTGACGGCGACTGGCTGCAAATTGAAATTACCGGCTGGACGGAAAGCGCCGGACGTCAGCGTGTACTAACCCAATTCCCAGGTAAACGCATCTTTGTTGCCt                                                                                                          <  1:1214008/140‑1 (MQ=255)
                               ctctGCTGCCTGCTTCGGAAGTGAAAGTCCTTAAACGTGACGGCGACTGGCTGCAAATTGAAATTACCGGCTGGACGGAAAGCGCCGGACGTCAGCGTGTACTAACCCAATTCCCAGGTAAACGCATCTTTGTTGCCTCg                                                                                                        >  2:109386/1‑140 (MQ=255)
                                 ctgctgCCTGCTTCGGAAGTGAAAGTCCTTAAACGTGACGGCGACTGGCTGCAAATTGAAATTACCGGCTGGACGGAAAGCGCCGGACGTCAGCGTGTACTAACCCAATTCCCAGGTAAACGCATCTTTGTTGCCTCGAt                                                                                                      <  2:388027/140‑1 (MQ=255)
                                  tgctgcCTGCTTCGGAAGTGAAAGTCCTTAAACGTGACGGCGACTGGCTGCAAATTGAAATTACCGGCTGGACGGAAAGCGCCGGACGTCAGCGTGTACTAACCCAATTCCCAGGTAAACGCATCTTTGTTGCCTCGAtt                                                                                                     >  1:454322/1‑140 (MQ=255)
                                    ctgcctgcTTCGGAAGTGAAAGTCCTTAAACGTGACGGCGACTGGCTGCAAATTGAAATTACCGGCTGGACGGAAAGCGCCGGACGTCAGCGTGTACTAACCCAATTCCCAGGTAAACGCATCTTTGTTGCCTCGATTCg                                                                                                   >  2:546573/1‑140 (MQ=255)
                                    ctgcctgcTTCGGAAGTGAAAGTCCTTAAACGTGACGGCGACTGGCTGCAAATTGAAATTACCGGCTGGACGGAAAGCGCCGGACGTCAGCGTGTACTAACCCAATTCCCAGGTAAACGCATCTTTGTTGCCTCGATTCg                                                                                                   <  2:729743/140‑1 (MQ=255)
                                      gcctgcTTCGGAAGTGAAAGTCCTTAAACGTGACGGCGACTGGCTGCAAATTGAAATTACCGGCTGGACGGAAAGCGCCGGACGTCAGCGTGTACTAACCCAATTCCCAGGTAAACGCATCTTTGTTGCCTCGATTCgtg                                                                                                 >  2:1200136/1‑140 (MQ=255)
                                      gcctgcTTCGGAAGTGAAAGTCCTTAAACGTGACGGCGACTGGCTGCAAATTGAAATTACCGGCTGGACGGAAAGCGCCGGACGTCAGCGTGTACTAACCCAATTCCCAGGTAAACGCATCTTTGTTGCCTCGATTCgtg                                                                                                 >  1:485204/1‑140 (MQ=255)
                                         tgcTTCGGAAGTGAAAGTCCTTAAACGTGACGGCGACTGGCTGCAAATTGAAATTACCGGCTGGACGGAAAGCGCCGGACGTCAGCGTGTACTAACCCAATTCCCAGGTAAACGCATCTTTGTTGCCTCGATTCgtggtg                                                                                              <  2:1245570/140‑1 (MQ=255)
                                         tgcTTCGGAAGTGAAAGTCCTTAAACGTGACGGCGACTGGCTGCAAATTGAAATTACCGGCTGGACGGAAAGCGCCGGACGTCAGCGTGTACTAACCCAATTCCCAGGTAAACGCATCTTTGTTGCCTCGATTCgtggtg                                                                                              <  1:1008270/140‑1 (MQ=255)
                                          gcTTCGGAAGTGAAAGTCCTTAAACGTGACGGCGACTGGCTGCAAATTGAAATTACCGGCTGGACGGAAAGCGCCGGACGTCAGCGTGTACTAACCCAATTCCCAGGTAAACGCATCTTTGTTGCCTCGATTCgtg                                                                                                 >  2:680141/1‑136 (MQ=255)
                                          gcTTCGGAAGTGAAAGTCCTTAAACGTGACGGCGACTGGCTGCAAATTGAAATTACCGGCTGGACGGAAAGCGCCGGACGTCAGCGTGTACTAACCCAATTCCCAGGTAAACGCATCTTTGTTGCCTCGATTCgtg                                                                                                 <  1:680141/136‑1 (MQ=255)
                                           cTTCGGAAGTGAAAGTCCTTAAACGTGACGGCGACTGGCTGCAAATTGAAATTACCGGCTGGACGGAAAGCGCCGGACGTCAGCGTGTACTAACCCAATTCCCAGGTAAACGCATCTTTGTTGCCTCGATTCGTGGTGAt                                                                                            >  2:639567/1‑140 (MQ=255)
                                            ttCGGAAGTGAAAGTCCTTAAACGTGACGGCGACTGGCTGCAAATTGAAATTACCGGCTGGACGGAAAGCGCCGGACGTCAGCGTGTACTAACCCAATTCCCAGGTAAACGCATCTTTGTTGCCTCGATTCGTGGTGAtg                                                                                           <  2:810231/140‑1 (MQ=255)
                                            ttCGGAAGTGAAAGTCCTTAAACGTGACGGCGACTGGCTGCAAATTGAAATTACCGGCTGGACGGAAAGCGCCGGACGTCAGCGTGTACTAACCCAATTCCCAGGTAAACGCATCTTTGTTGCCTCGATTCGTGGTGAtg                                                                                           >  2:320665/1‑140 (MQ=255)
                                            ttCGGAAGTGAAAGTCCTTAAACGTGACGGCGACTGGCTGCAAATTGAAACTACCGGATGGACGGAAAGCGCCGGACGTCAGCGCGTATTCACCCACAACCCGCGTACGCGAATATTTGTTGCCTCGATTCGTGGTGAtg                                                                                           >  2:1136914/1‑140 (MQ=255)
                                              cGGAAGTGAAAGTCCTTAAACGTGACGGCGACTGGCTGCAAATTGAAATTACCGGCTGGACGGAAAGCGCCGGACGTCAGCGTGTACTAACCCAATTCCCAGGTAAACGCATCTTTGTTGCCTCGATTCGTGGTGAtgt‑‑‑g                                                                                      >  2:1005450/1‑140 (MQ=255)
                                                 aaGTGAAAGTCCTTAAACGTGACGGCGACTGGCTGCAAATTGAAATTACCGGCTGGACGGAAAGCGCCGGACGTCAGCGTGTACTAACCCAATTCCCAGGTAAACGCATCTTTGTTGCCTCGATTCGTGGTGATGT‑‑‑gcag                                                                                   >  1:407797/1‑140 (MQ=255)
                                                 aaGTGAAAGTCCTTAAACGTGACGGCGACTGGCTGCAAATTGAAATTACCGGCTGGACGGAAAGCGCCGGACGTCAGCGTGTACTAACCCAATTCCCAGGTAAACGCATCTTTGTTGCCTCGATTCGTGGTGATGT‑‑‑gcag                                                                                   >  1:175233/1‑140 (MQ=255)
                                                    tGAAAGTCCTTAAACGTGACGGCGACTGGCTGCAAATTGAAATTACCGGCTGGACGGAAAGCGCCGGACGTCAGCGTGTACTAACCCAATTCCCAGGTAAACGCATCTTTGTTGCCTCGATTCGTGGTGATGT‑‑‑gcagcag                                                                                <  1:1118103/140‑1 (MQ=255)
                                                     gAAAGTCCTTAAACGTGACGGCGACTGGCTGCAAATTGAAATTACCGGCTGGACGGAAAGCGCCGGACGTCAGCGTGTACTAACCCAATTCCCAGGTAAACGCATCTTTGTTGCCTCGATTCGTGGTGATGT‑‑‑gcagcagc                                                                               >  1:28228/1‑140 (MQ=255)
                                                            cTTAAACGTGACGGCGACTGGCTGCAAATTGAAATTACCGGCTGGACGGAAAGCGCCGGACGTCAGCGTGTACTAACCCAATTCCCAGGTAAACGCATCTTTGTTGCCTCGATTCGTGGTGATGT‑‑‑GCAGCAGCAGGTaaa                                                                        <  1:109386/140‑1 (MQ=255)
                                                                    tGACGGCGACTGGCTGCAAATTGAAATTACCGGCTGGACGGAAAGCGCCGGACGTCAGCGTGTACTAACCCAATTCCCAGGTAAACGCATCTTTGTTGCCTCGATTCGTGGTGATGT‑‑‑GCAGCAGCAGGTAAAAACGCTgg                                                                >  1:823362/1‑140 (MQ=255)
                                                                    tGACGGCGACTGGCTGCAAATTGAAATTACCGGCTGGACGGAAAGCGCCGGACGTCAGCGTGTACTAACCCAATTCCCAGGTAAACGCATCTTTGTTGCCTCGATTCGTGGTGATGT‑‑‑GCAGCAGCAGGTAAAAACGCTgg                                                                >  1:1190450/1‑140 (MQ=255)
                                                                    tGACGGCGACTGGCTGCAAATTGAAATTACCGGCTGGACGGAAAGCGCCGGACGTCAGCGTGTACTAACCCAATTCCCAGGTAAACGCATCTTTGTTGCCTCGATTCGTGGTGATGT‑‑‑GCAGCAGCAGGTAAAAACGCTgg                                                                >  2:505779/1‑140 (MQ=255)
                                                                     gACGGCGACTGGCTGCAAATTGAAATTACCGGCTGGACGGAAAGCGCCGGACGTCAGCGTGTACTAACCCAATTCCCAGGTAAACGCATCTTTGTTGCCTCGATTCGTGGTGATGT‑‑‑GCAGCAGCAGGTAAAAACGCTGga                                                               >  2:1168569/1‑140 (MQ=255)
                                                                      aCGGCGACTGGCTGCAAATTGAAATTACCGGCTGGACGGAAAGCGCCGGACGTCAGCGTGTACTAACCCAATTCCCAGGTAAACGCATCTTTGTTGCCTCGATTCGTGGTGATGT‑‑‑GCAGCAGCAGGTAAAAACGCTGgag                                                              >  2:368539/1‑140 (MQ=255)
                                                                      aCGGCGACTGGCTGCAAATTGAAATTACCGGCTGGACGGAAAGCGCCGGACGTCAGCGTGTACTAACCCAATTCCCAGGTAAACGCATCTTTGTTGCCTCGATTCGTGGTGATGT‑‑‑GCAGCAGCAGGTAAAAACGCTGgag                                                              >  2:277540/1‑140 (MQ=255)
                                                                      aCGGCGACTGGCTGCAAATTGAAATTACCGGCTGGACGGAAAGCGCCGGACGTCAGCGTGTACTAACCCAATTCCCAGGTAAACGCATCTTTGTTGCCTCGATTCGTGGTGATGT‑‑‑GCAGCAGCAGGTAAAAACGCTGgag                                                              >  2:324462/1‑140 (MQ=255)
                                                                                gCTGCAAATTGAAATTACCGGCTGGACGGAAAGCGCCGGACGTCAGCGTGTACTAACCCAATTCCCAGGTAAACGCATCTTTGTTGCCTCGATTCGTGGTGATGT‑‑‑GCAGCAGCAGGTAAAAACGCTGGAGAAAACCACCg                                                    >  2:1082999/1‑140 (MQ=255)
                                                                                gCTGCAAATTGAAATTACCGGCTGGACGGAAAGCGCCGGACGTCAGCGTGTACTAACCCAATTCCCAGGTAAACGCATCTTTGTTGCCTCGATTCGTGGTGATGT‑‑‑GCAGCAGCAGGTAAAAACGCTGGAGAAAACCACCg                                                    >  1:441961/1‑140 (MQ=255)
                                                                                     aaaTTGAAATTACCGGCTGGACGGAAAGCGCCGGACGTCAGCGTGTACTAACCCAATTCCCAGGTAAACGCATCTTTGTTGCCTCGATTCGTGGTGATGT‑‑‑GCAGCAGCAGGTAAAAACGCTGGAGAAAACCACCGTTGcc                                               <  1:1200136/140‑1 (MQ=255)
                                                                                     aaaTTGAAATTACCGGCTGGACGGAAAGCGCCGGACGTCAGCGTGTACTAACCCAATTCCCAGGTAAACGCATCTTTGTTGCCTCGATTCGTGGTGATGT‑‑‑GCAGCAGCAGGTAAAAACGCTGGAGAAAACCACCGTTGcc                                               <  2:913380/140‑1 (MQ=255)
                                                                                     aaaTTGAAATTACCGGCTGGACGGAAAGCGCCGGACGTCAGCGTGTACTAACCCAATTCCCAGGTAAACGCATCTTTGTTGCCTCGATTCGTGGTGATGT‑‑‑GCAGCAGCAGGTAAAAACGCTGGAGAAAACCACCGTTGcc                                               <  1:215207/140‑1 (MQ=255)
                                                                                      aaTTGAAATTACCGGCTGGACGGAAAGCGCCGGACGTCAGCGTGTACTAACCCAATTCCCAGGTAAACGCATCTTTGTTGCCTCGATTCGTGGTGATGT‑‑‑GCAGCAGCAGGTAAAAACGCTGGAGAAAACCACCGTTGCCg                                              <  1:644505/140‑1 (MQ=255)
                                                                                       aTTGAAATTACCGGCTGGACGGAAAGCGCCGGACGTCAGCGTGTACTAACCCAATTCCCAGGTAAACGCATCTTTGTTGCCTCGATTCGTGGTGATGT‑‑‑GCAGCAGCAGGTAAAAACGCTGGAGAAAACCACCGTTGCCGa                                             <  1:229618/140‑1 (MQ=255)
                                                                                       aTTGAAATTACCGGCTGGACGGAAAGCGCCGGACGTCAGCGTGTACTAACCCAATTCCCAGGTAAACGCATCTTTGTTGCCTCGATTCGTGGTGATGT‑‑‑GCAGCAGCAGGTAAAAACGCTGGAGAAAACCACCGTTGCCGa                                             <  2:870958/140‑1 (MQ=255)
                                                                                         tGAAATTACCGGCTGGACGGAAAGCGCCGGACGTCAGCGTGTACTAACCCAATTCCCAGGTAAACGCATCTTTGTTGCCTCGATTCGTGGTGATGT‑‑‑GCAGCAGCAGGTAAAAACGCTGGAGAAAACCACCGTTGCCGaca                                           <  1:644110/140‑1 (MQ=255)
                                                                                          gAAATTACCGGCTGGACGGAAAGCGCCGGACGTCAGCGTGTACTAACCCAATTCCCAGGTAAACGCATCTTTGTTGCCTCGATTCGTGGTGATGT‑‑‑GCAGCAGCAGGTAAAAACGCTGGAGAAAACCACCGTTGCCGacac                                          >  2:960411/1‑140 (MQ=255)
                                                                                               tACCGGCTGGACGGAAAGCGCCGGACGTCAGCGTGTACTAACCCAATTCCCAGGTAAACGCATCTTTGTTGCCTCGATTCGTGGTGATGT‑‑‑GCAGCAGCAGGTAAAAACGCTGGAGAAAACCACCGTTGCCGACACCAATa                                     <  1:960411/140‑1 (MQ=255)
                                                                                                 ccGGCTGGACGGAAAGCGCCGGACGTCAGCGTGTACTAACCCAATTCCCAGGTAAACGCATCTTTGTTGCCTCGATTCGTGGTGATGT‑‑‑GCAGCAGCAGGTAAAAACGCTGGAGAAAACCACCGTTGCCGACACCAATAcc                                   <  1:638602/140‑1 (MQ=255)
                                                                                                  cGGCTGGACGGAAAGCGCCGGACGTCAGCGTGTACTAACCCAATTCCCAGGTAAACGCATCTTTGTTGCCTCGATTCGTGGTGATGT‑‑‑GCAGCAGCAGGTAAAAACGCTGGAGAAAACCACCGTTGCCGACACCAATACCg                                  >  2:420846/1‑140 (MQ=255)
                                                                                                     cTGGACGGAAAGCGCCGGACGTCAGCGTGTACTAACCCAATTCCCAGGTAAACGCATCTTTGTTGCCTCGATTCGTGGTGATGT‑‑‑GCAGCAGCAGGTAAAAACGCTGGAGAAAACCACCGTTGCCGACACCAATACCGAGt                               <  1:367041/140‑1 (MQ=255)
                                                                                                        gACGGAAAGCGCCGGACGTCAGCGTGTACTAACCCAATTCCCAGGTAAACGCATCTTTGTTGCCTCGATTCGTGGTGATGT‑‑‑GCAGCAGCAGGTAAAAACGCTGGAGAAAACCACCGTTGCCGACACCAATACCGAGTGGa                            <  1:320665/140‑1 (MQ=255)
                                                                                                         aCGGAAAGCGCCGGACGTCAGCGTGTACTAACCCAATTCCCAGGTAAACGCATCTTTGTTGCCTCGATTCGTGGTGATGT‑‑‑GCAGCAGCAGGTAAAAACGCTGGAGAAAACCACCGTTGCCGACACCAATACCGAGTGGAg                           >  2:1163701/1‑140 (MQ=255)
                                                                                                          cGGAAAGCGCCGGACGTCAGCGTGTACTAACCCAATTCCCAGGTAAACGCATCTTTGTTGCCTCGATTCGTGGTGATGT‑‑‑GCAGCAGCAGGTAAAAACGCTGGAGAAAACCACCGTTGCCGACACCAATACCGAGTGGAGc                          <  1:368539/140‑1 (MQ=255)
                                                                                                             aaaGCGCCGGACGTCAGCGTGTACTAACCCAATTCCCAGGTAAACGCATCTTTGTTGCCTCGATTCGTGGTGATGT‑‑‑GCAGCAGCAGGTAAAAACGCTGGAGAAAACCACCGTTGCCGACACCAATACCGAGTGGAGCAAg                       <  2:454322/140‑1 (MQ=255)
                                                                                                                  gcCGGACGTCAGCGTGTACTAACCCAATTCCCAGGTAAACGCATCTTTGTTGCCTCGATTCGTGGTGATGT‑‑‑GCAGCAGCAGGTAAAAACGCTGGAGAAAACCACCGTTGCCGACACCAATACCGAGTGGAGCAAGTTGCa                  >  1:606957/1‑140 (MQ=255)
                                                                                                                   ccGGACGTCAGCGTGTACTAACCCAATTCCCAGGTAAACGCATCTTTGTTGCCTCGATTCGTGGTGATGT‑‑‑GCAGCAGCAGGTAAAAACGCTGGAGAAAACCACCGTTGCCGACACCAATACCGAGTGGAGCAAGTTGCAg                 >  2:782914/1‑140 (MQ=255)
                                                                                                                     ggACGTCAGCGTGTACTAACCCAATTCCCAGGTAAACGCATCTTTGTTGCCTCGATTCGTGGTGATGT‑‑‑GCAGCAGCAGGTAAAAACGCTGGAGAAAACCACCGTTGCCGACACCAATACCGAGTGGAGCAAGTTGCAGGc               <  1:410177/140‑1 (MQ=255)
                                                                                                                     ggACGTCAGCGTGTACTAACCCAATTCCCAGGTAAACGCATCTTTGTTGCCTCGATTCGTGGTGATGT‑‑‑GCAGCAGCAGGTAAAAACGCTGGAGAAAACCACCGTTGCCGACACCAATACCGAGTGGAGCAAGTTGCAGGc               <  2:267787/140‑1 (MQ=255)
                                                                                                                        cGTCAGCGTGTACTCACCCAATTCCCAGGTAAACGCATCTTTGTTGCCTCGATTCGTGGTGATGTGCAGCAGCAGCAGGTAAAAACGCTGGAGAAAACCACCGTTGCCGACACCAATACCGAGTGGAGCAAGTTGCAGGc               <  1:1136914/140‑1 (MQ=255)
                                                                                                                          tCAGCGTGTACTAACCCAATTCCCAGGTAAACGCATCTTTGTTGCCTCGATTCGTGGTGATGT‑‑‑GCAGCAGCAGGTAAAAACGCTGGAGAAAACCACCGTTGCCGACACCAATACCGAGTGGAGCAAGTTGCAGGCCACTg          <  1:639567/140‑1 (MQ=255)
                                                                                                                            aGCGTGTACTAACCCAATTCCCAGGTAAACGCATCTTTGTTGCCTCGATTCGTGGTGATGT‑‑‑GCAGCAGCAGGTAAAAACGCTGGAGAAAACCACCGTTGCCGACACCGATACCGAGTGGAGCAAGTTGCAGGCCACTGCg        >  2:1228339/1‑140 (MQ=255)
                                                                                                                            aGCGTGTACTAACCCAATTCCCAGGTAAACGCATCTTTGTTGCCTCGATTCGTGGTGATGT‑‑‑GCAGCAGCAGGTAAAAACGCTGGAGAAAACCACCGTTGCCGACACCAATACCGAGTGGAGCAAGTTGCAGGCCACTGCg        <  2:535830/140‑1 (MQ=255)
                                                                                                                                tgtACTAACCCAATTCCCAGGTAAACGCATCTTTGTTGCCTCGATTCGTGGTGATGT‑‑‑GCAGCAGCAGGTAAAAACGCTGGAGAAAACCACCGTTGCCGACACCAATACCGAGTGGAGCAAGTTGCAGGCCACTGCGTGGa    <  2:176157/140‑1 (MQ=255)
                                                                                                                                 gtACTCACCCAATTCCCAGGTAAACGCATCTTTGTTGCCTCGATTCGTGGTGATGT‑‑‑GCAGCAGCAGGTAAAAACGCTGGAGAAAACCACCGTTGCCGACACCAATACCGAGTGGAGCAAGTTGCAGGCCACTGCGTGGAt   >  2:1057747/1‑140 (MQ=255)
                                                                                                                                 gtACTAACCCAATTCCCAGGTAAACGCATCTTTGTTGCCTCGATTCGTGGTGATGT‑‑‑GCAGCAGCAGGTAAAAACGCTGGAGAAAACCACCGTTGCCGACACCAATACCGAGTGGAGCAAGTTGCAGGCCACTGCGTGGAt   <  1:142019/140‑1 (MQ=255)
                                                                                                                                  tACTAACCCAATTCCCAGGTAAACGCATCTTTGTTGCCTCGATTCGTGGTGATGT‑‑‑GCAGCAGCAGGTAAAAACGCTGGAGAAAACCACCGTTGCCGACACCAATACCGAGTGGAGCAAGTTGCAGGCCACTGCGTGGATg  <  2:869647/140‑1 (MQ=255)
                                                                                                                                  tACTAACCCAATTCCCAGGTAAACGCATCTTTGTTGCCTCGATTCGTGGTGATGT‑‑‑GCAGCAGCAGGTAAAAACGCTGGAGAAAACCACCGTTGCCGACACCAATACCGAGTGGAGCAAGTTGCAGGCCACTGCGTGGATg  <  1:1013243/140‑1 (MQ=255)
                                                                                                                                      |                                                                                                                                          
GCGGCGAAAGGCGATAAAGAAGCCTCTGGTTCTCTGCTGCCTGCTTCGGAAGTGAAAGTCCTTAAACGTGACGGCGACTGGCTGCAAATTGAAATTACCGGCTGGACGGAAAGCGCCGGACGTCAGCGTGTACTCACCCAATTCCCAGGTAAACGCATCTTTGTTGCCTCGATTCGTGGTGATGT‑‑‑GCAGCAGCAGGTAAAAACGCTGGAGAAAACCACCGTTGCCGACACCAATACCGAGTGGAGCAAGTTGCAGGCCACTGCGTGGATG  >  NC_000913/1058729‑1058998

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: