BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,201,284	T→A	T33S (ACC→TCC)	ymfH ←	e14 prophage; protein YmfH

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,201,284	0	T	A	100.0%	498.5 / NA	136	T33S (ACC→TCC)	ymfH	e14 prophage; protein YmfH
Reads supporting (aligned to +/- strand): ref base T (0/0); new base A (59/77); total (59/77)

Only 100 of 137 total aligned reads displayed.

GGGTCGGGTTATTAACCCGTCATCCGGGGATACTCTTCTCTGTTTTGTAAAAAGGGCGGTACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGTGCCTGGCGAAGGTTGCACACCAGGCGGGTGGGTATCCACAGAAGGTCGATTGTCAGCCTCAACCTTAACCCGCGTGCGCTGAGCCGCATTCACCACAACGCTAAGGAT‑‑TCTCTCTGGTTGAAAATACTTAGCTGT  >  NC_000913/1201147‑1201419

gggTCGGGTTATTAACCCGTCATCCGGGGATACTCTTCTCTGTTTTGTAAAAAGGGCGGTACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGAGc                                                                                                                                         >  1:584717/1‑140 (MQ=255)

 ggTCGGGTTATTAACCCGTCATCCGGGGATACTCTTCTCTGTTTTGTAAAAAGGGCGGTACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGAGcc                                                                                                                                        >  1:729947/1‑140 (MQ=255)

  gTCGGGTTATTAACCCGTCATCCGGGGATACTCTTCTCTGTTTTGTAAAAAGGGCGGTACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGAGCCt                                                                                                                                       >  2:285250/1‑140 (MQ=255)

   tCGGGTTATTAACCCGTCATCCGGGGATACTCTTCTCTGTTTTGTAAAAAGGGCGGTACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGAGCCTg                                                                                                                                      >  2:900235/1‑140 (MQ=255)

   tCGGGTTATTAACCCGTCATCCGGGGATACTCTTCTCTGTTTTGTAAAAAGGGCGGTACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGAGCCTg                                                                                                                                      >  2:859372/1‑140 (MQ=255)

   tCGGGTTATTAACCCGTCATCCGGGGATACTCTTCTCTGTTTTGTAAAAAGGGCGGTACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGAGCCTg                                                                                                                                      >  2:1256276/1‑140 (MQ=255)

     gggTTATTAACCCGTCATCCGGGGATACTCTTCTCTGTTTTGTAAAAAGGGCGGTACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGAGCCTGGc                                                                                                                                    <  1:1090844/140‑1 (MQ=255)

     gggTTATTAACCCGTCATCCGGGGATACTCTTCTCTGTTTTGTAAAAAGGGCGGTACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGAGCCTGGc                                                                                                                                    <  1:1135888/140‑1 (MQ=255)

     gggTTATTAACCCGTCATCCGGGGATACTCTTCTCTGTTTTGTAAAAAGGGCGGTACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGAGCCTGGc                                                                                                                                    <  2:1269151/140‑1 (MQ=255)

       gTTATTAACCCGTCATCCGGGGATACTCTTCTCTGTTTTGTAAAAAGGGCGGTACCAGAAAGGCATAAGGAAAAAACTGGTTCCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGAGCCTGGCGa                                                                                                                                  <  1:913371/140‑1 (MQ=255)

       gTTATTAACCCGTCATCCGGGGATACTCTTCTCTGTTTTGTAAAAAGGGCGGTACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGAGCCTGGCGa                                                                                                                                  >  2:989669/1‑140 (MQ=255)

        ttattaACCCGTCATCCGGGGATACTCTTCTCTGTTTTGTAAAAAGGGCGGTACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGAGCCTGGCGaa                                                                                                                                 <  1:972132/140‑1 (MQ=255)

        ttattaACCCGTCATCCGGGGATACTCTTCTCTGTTTTGTAAAAAGGGCGGTACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGAGCCTGGCGaa                                                                                                                                 <  2:1074898/140‑1 (MQ=255)

           ttaACCCGTCATCCGGGGATACTCTTCTCTGTTTTGTAAAAAGGGCGGTACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGAGCCTGGCGAAGGt                                                                                                                              >  1:348655/1‑140 (MQ=255)

             aaCCCGTCATCCGGGGTTACTCTTCTCTGTTTTGTAAAAAGGGCGGTACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGAGCCTGGCGAAGGTTg                                                                                                                            <  2:84252/140‑1 (MQ=255)

               cccGTCATCCGGGGATACTCTTCTCTGTTTTGTAAAAAGGGCGGTACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGAGCCTGGCGAAGGTTGca                                                                                                                          <  1:389186/140‑1 (MQ=255)

                 cGTCATCCGGGGATACTCTTCTCTGTTTTGTAAAAAGGGCGGTACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGAGCCTGGCGAAGGTTGcaca                                                                                                                        >  2:799224/1‑140 (MQ=255)

                   tCATCCGGGGATACTCTTCTCTGTTTTGTAAAAAGGGCGGTACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGAGCCTGGCGAAGGTTGCACAcc                                                                                                                      <  1:1234095/140‑1 (MQ=255)

                     aTCCGGGGATACTCTTCTCTGTTTTGTAAAAAGGGCGGTACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGAGCCTGGCGAAGGTTGCACACCAg                                                                                                                    >  2:442612/1‑140 (MQ=255)

                      tCCGGGGATACTCTTCTCTGTTTTGTAAAAAGGGCGGTACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGAGCCTGGCGAAGGTTGCACACCAgg                                                                                                                   <  2:172077/140‑1 (MQ=255)

                       ccGGGGATACTCTTCTCTGTTTTGTAAAAAGGGCGGTACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGAGCCTGGCGAAGGTTGCACACCAGGc                                                                                                                  <  1:775724/140‑1 (MQ=255)

                        cGGGGATACTCTTCTCTGTTTTGTAAAAAGGGCGGTACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGAGCCTGGCGAAGGTTGCACACCAGGCg                                                                                                                 <  1:975372/140‑1 (MQ=255)

                          gggATACTCTTCTCTGTTTTGTAAAAAGGGCGGTACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGAGCCTGGCGAAGGTTGCACACCAGGCggg                                                                                                               <  2:111716/140‑1 (MQ=255)

                          gggATACTCTTCTCTGTTTTGTAAAAAGGGCGGTACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGAGCCTGGCGAAGGTTGCACACCAGGCggg                                                                                                               <  1:945364/140‑1 (MQ=255)

                             aTACTGTTCTCTGTTTTGTAAAAGGGGCGGTACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGAGCCTGGCGAAGGTTGCACACCAGGCgggtgg                                                                                                            <  1:1298635/140‑1 (MQ=255)

                             aTACTCTTCTCTGTTTTGTAAAAAGGGCGGTACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGAGCCTGGCGAAGGTTGCACACCAGGc                                                                                                                  >  1:361146/1‑134 (MQ=255)

                             aTACTCTTCTCTGTTTTGTAAAAAGGGCGGTACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGAGCCTGGCGAAGGTTGCACACCAGGc                                                                                                                  <  2:361146/134‑1 (MQ=255)

                             aTACTCTTCTCTGTTTTGTAAAAAGGGCGGTACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGAGCCTGGCGAAGGTTGCACACCAGGCgggtgg                                                                                                            <  2:440032/140‑1 (MQ=255)

                             aTACTCTTCTCTGTTTTGTAAAAAGGGCGGTACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGAGCCTGGCGAAGGTTGCACACCAGGCgggtgg                                                                                                            <  2:1296433/140‑1 (MQ=255)

                             aTACTCTTCTCTGTTTTGTAAAAAGGGCGGTACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGAGCCTGGCGAAGGTTGCACACCAGGCgggtgg                                                                                                            <  1:582545/140‑1 (MQ=255)

                             aTACTCTTCTCTGTTTTGTAAAAAGGGCGGTACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGAGCCTGGCGAAGGTTGCACACCAGGCgggtgg                                                                                                            <  1:859372/140‑1 (MQ=255)

                             aTACACTTCTCTGTTTTGTAAAAAGGGCGGTACCAGAAAGGACTAAGAAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGAGCCTGGCGAAGGTTGCACACCAGGCgggtgg                                                                                                            <  2:398957/140‑1 (MQ=255)

                                    tctcTGTTTTGAAAAAAGGGCGGTACCATAAAGGACTAAGGAAAAAACTGGTCCCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGAGCCTGGCGAAGGTTGCACACCAGGCGGGTGGGTATCca                                                                                                     <  2:1096507/140‑1 (MQ=255)

                                       ctGTTTTGTAAAAAGGGCGGTACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGAGCCTGGCGAAGGTTGCACACCAGGCGGGTGGGTATCCACAg                                                                                                  >  2:493332/1‑140 (MQ=255)

                                          ttttGTAAAAAGGGCGGTACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGAGCCTGGCGAAGGTTGCACACCAGGCGGGTGGGTATCCACAGAAg                                                                                               >  2:764232/1‑140 (MQ=255)

                                            ttGTAAAAAGGGCGGTACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGAGCCTGGCGAAGGTTGCACACCAGGCgggt                                                                                                              <  2:155131/123‑1 (MQ=255)

                                               tAAAAAGGGCGGTACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGAGCCTGGCGAAGGTTGCACACCAGGCGGGTGGGGATCCACAGAAGGTCGa                                                                                          >  1:811101/1‑140 (MQ=255)

                                                 aaaaGGGCGGTACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACT‑‑ACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGAGCCTGGCGAAGGTTGCACACCAGGCGGGTGGGTATCCACAGAAGGTCGATTGt                                                                                      <  1:1103237/140‑1 (MQ=255)

                                                    aGGGCGGTACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGAGCCTGGCGAAGGTTGCACACCAGGCGGGTGGGTATCCACAGAAGGTCGATTGTc                                                                                     >  1:759745/1‑140 (MQ=255)

                                                     gggCGGTACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGAGCCTGGCGAAGGTTGCACACCAGGCGGGTGGGTATCCACAGAAGGTCGATTGTCa                                                                                    <  1:173/140‑1 (MQ=255)

                                                         ggTACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGAGCCTGGCGAAGGTTGCACACCAGGCGGGTGGGTATCCACAGAAGGTCGATTGTCAGCCt                                                                                <  1:1202879/140‑1 (MQ=255)

                                                         ggTACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGAGCCTGGCGAAGGTTGCACACCAGGCGGGTGGGTATCCACAGAAGGTCGATTGTCAGCCt                                                                                <  2:1220671/140‑1 (MQ=255)

                                                         ggTACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGAGCCTGGCGAAGGTTGCACACCAGGCGGGTGGGTATCCACAGAAGGTCGATTGTCAGCCt                                                                                <  2:693143/140‑1 (MQ=255)

                                                         ggTACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGAGCCTGGCGAAGGTTGCACACCAGGCGGGTGGGTATCCACAGAAGGTCGATTGTCAGCCt                                                                                <  2:710405/140‑1 (MQ=255)

                                                         ggTACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGAGCCTGGCGAAGGTTGCACACCAGGCGGGTGGGTATCCACAGAAGGTCGATTGTCAGCCt                                                                                <  1:989669/140‑1 (MQ=255)

                                                         ggTACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGAGCCTGGCGAAGGTTGCACACCAGGCGGGTGGGTATCCACAGAAGGTCGATTGTCAGCCt                                                                                <  1:338712/140‑1 (MQ=255)

                                                         ggTACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGAGCCTGGCGAAGGTTGCACACCAGGCGGGTGGGTATCCACAGAAGGTCGATTGTCAGCCt                                                                                <  2:875557/140‑1 (MQ=255)

                                                         ggTACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGAGCCTGGCGAAGGTTGCACACCAGGCGGGTGGGTATCCACAGAAGGTCGATTGTCAGCCt                                                                                >  1:677666/1‑140 (MQ=255)

                                                         ggTACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGAGCCTGGCGAAGGTTGCACACCAGGCGGGTGGGTATCCACAGAAGGTCGATTGTCAGCCt                                                                                <  1:797771/140‑1 (MQ=255)

                                                         ggTACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGAGCCTGGCGAAGGTTGCACACCAGGCGGGCGGGTATCCACAGAAGGTCGATTGTCAGCCt                                                                                >  1:1168780/1‑140 (MQ=255)

                                                                  aaggtttAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGAGCCTGGCGAAGGTTGCACACCAGGCGGGTGGGTATCCACAGAAGGTCGATTGTCAGCCTCAACCTTaa                                                                       <  2:17644/134‑1 (MQ=255)

                                                                  aaGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGAGCCTGGCGAAGGTTGCACACCAGGCGGGTGGGTATCCACAGAAGGTCGATTGTCAGCCTCAACCTTaa                                                                       <  2:405346/140‑1 (MQ=255)

                                                                  aaGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGAGCCTGGCGAAGGTTGCACACCAGGCGGGTGGGTATCCACAGAAGGTCGATTGTCAGCCTCAACCTTaa                                                                       <  1:1026539/140‑1 (MQ=255)

                                                                  aaGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGAGCCTGGCGAAGGTTGCACACCAGGCGGGTGGGTATCCACAGAAGGTCGATTGTCAGCCTCAACCTTaa                                                                       <  2:405453/140‑1 (MQ=255)

                                                                     gACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGAGCCTGGCGAAGGTTGCACACCAGGCGGGTGGGTATCCACAGAAGGTCGATTGTCAGCCTCAACCTTAAccc                                                                    >  1:971525/1‑140 (MQ=255)

                                                                     gACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGAGCCTGGCGAAGGTTGCACACCAGGCGGGTGGGTATCCACAGAAGGTCGATTGTCAGCCTCAACCTTAAccc                                                                    >  1:1216903/1‑140 (MQ=255)

                                                                     gACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGAGCCTGGCGAAGGTTGCACACCAGGCGGGTGGGTATCCACAGAAGGTCGATTGTCAGCCTCAACCTTAAccc                                                                    >  2:506008/1‑140 (MQ=255)

                                                                     gACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGAGCCTGGCGAAGGTTGCACACCAGGCGGGTGGGTATCCACAGAAGGTCGATTGTCAGCCTCAACCTTAAccc                                                                    >  2:4914/1‑140 (MQ=255)

                                                                     gACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGAGCCTGGCGAAGGTTGCACACCAGGCGGGTGGGTATCCACAGAAGGTCGATTGTCAGCCTCAACCTTAAccc                                                                    >  2:488315/1‑140 (MQ=255)

                                                                     gACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGAGCCTGGCGAAGGTTGCACACCAGGCGGGTGGGTATCCACAGAAGGTCGATTGTCAGCCTCAACCTTAAccc                                                                    >  1:151801/1‑140 (MQ=255)

                                                                          aGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGAGCCTGGCGAAGGTTGCACACCAGGCGGGTGGGTATCCACAGAAGGTCGATTGTCAGCCTCAACCTTAACCCGCGTg                                                               >  1:183159/1‑140 (MQ=255)

                                                                          aGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGAGCCTGGCGAAGGTTGCACACCAGGCGGGTGGGTATCCACAGAAGGTCGATTGTCAGCCTCAACCTTAACCCGCGTg                                                               >  1:297990/1‑140 (MQ=255)

                                                                          aGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGAGCCTGGCGAAGGTTGCACACCAGGCGGGTGGGTATCCACAGAAGGTCGATTGTCAGCCTCAACCTTAACCCGCGTg                                                               >  1:1151025/1‑140 (MQ=255)

                                                                           ggAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGAGCCTGGCGAAGGTTGCACACCAGGCGGGTGGGTATCCACAGAAGGTCGATTGTCAGCCTCAACCTTAACCCGCGTgc                                                              >  1:1113476/1‑140 (MQ=255)

                                                                            gAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGAGCCTGGCGAAGGTTGCACACCAGGCGGGTGGGTATCCACAGAAGGTCGATTGTCAGCCTCAACCTTAACCCGCGTgcg                                                             <  2:448726/140‑1 (MQ=255)

                                                                            gAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGAGCCTGGCGAAGGTTGCACACCAGGCGGGTGGGTATCCACAGAAGGTCGATTGTCAGCCTCAACCTTAACCCGCGTgcg                                                             <  1:4914/140‑1 (MQ=255)

                                                                               aaaaCTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGAGCCTGGCGAAGGTTGCACACCAGGCGGGTGGGTATCCACAGAAGGTCGATTGTCAGCCTCAACCTTAACCCGCGTGCGCTg                                                          >  1:618958/1‑140 (MQ=255)

                                                                                   cTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGAGCCTGGCGAAGGTTGCACACCAGGCGGGTGGGTATCCACAGAAGGTCGATTGTCAGCCTCAACCTTAACCCGCGTGCGCTGAGcc                                                      <  2:36416/140‑1 (MQ=255)

                                                                                                 aCTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGAGCCTGGCGAAGGTTGCACACCAGGCGGGTGGGTATCCACAGAAGGTCGATTGTCAGCCTCAACCTTAACCCGCGTGCGCTGAGCCGCATTCACCACAAc                                        <  2:1305148/140‑1 (MQ=255)

                                                                                                    acacacAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGAGCCTGGCGAAGGTTGCACACCAGGCGGGTGGGTATCCACAGAAGGTCGATTGTCAGCCTCAACCTTAACCCGCGTGCGCTGAGCCGCATTCACCACAACGCt                                     <  2:568249/140‑1 (MQ=255)

                                                                                                    acacacAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGAGCCTGGCGAAGGTTGCACACCAGGCGGGTGGGTATCCACAGAAGGTCGATTGTCAGCCTCAACCTTAACCCGCGTGCGCTGAGCCGCATTCACCACAACGCt                                     <  1:1070140/140‑1 (MQ=255)

                                                                                                     cacacaGCATAAAGTTGTGGTGTCGGGTGCCCCCGGAGCCTGGCGAAGGTTGCACACCAGGCGGGTGGGTATCCACAGAAGGTCGATTGTCAGCCTCAACCTTAACCCGCGTGCGCTGAGCCGCATTCACCACAACGCTa                                    <  2:740864/140‑1 (MQ=255)

                                                                                                     cacacaGCATAAAGTTGTGGTGTCGGGTGCCCCCGGAGCCTGGCGAAGGTTGCACACCAGGCGGGGGGGTATCCCCAGAAGGGCGATTGTCAGCCTCAACCTTAACCCCCGTGCGCTGAGCCGCATTCACCACAACGCTa                                    >  1:272766/1‑140 (MQ=255)

                                                                                                          aGCATAAAGTTGTGGTGTCGGGTGCCCCCGGAGCCTGGCGAAGGTTGCACACCAGGCGGGTGGGTATCCACAGAAGGTCGATTGTCAGCCTCAACCTTAACCCGCGTGCGCTGAGCCGCATTcaccac                                           <  2:1160656/128‑1 (MQ=255)

                                                                                                          aGCATAAAGTTGTGGTGTCGGGTGCCCCCGGAGCCTGGCGAAGGTTGCACACCAGGCGGGTGGGTATCCACAGAAGGTCGATTGTCAGCCTCAACCTTAACCCGCGTGCGCTGAGCCGCATTcaccac                                           >  1:1160656/1‑128 (MQ=255)

                                                                                                          aGCATAAAGTTGTGGTGTCGGGTGCCCCCGGAGCCTGGCGAAGGTTGCACACCAGGCGGGTGGGTATCCACAGAAGGTCGATTGTCAGCCTCAACCTTAACCCGCGTGCGCTGAGCCGCATTCACCACAACGCTAAGGAt                               >  2:957381/1‑140 (MQ=255)

                                                                                                          aGCATAAAGTTGTGGTGTCGGGTGCCCCCGGAGCCTGGCGAAGGTTGCACACCAGGCGGGTGGGTATCCACAGAAGGTCGATTGTCAGCCTCAACCTTAACCCGCGTGCGCTGAGCCGCATTCACCACAACGCTAAGGAt                               >  2:88280/1‑140 (MQ=255)

                                                                                                          aGCATAAAGTTGTGGTGTCGGGTGCCCCCGGAGCCTGGCGAAGGTTGCACACCAGGCGGGTGGGTATCCACAGAAGGTCGATTGTCAGCCTCAACCTTAACCCGCGTGCGCTGAGCCGCATTCACCACAACGCTAAGGAt                               >  1:523192/1‑140 (MQ=255)

                                                                                                          aGCATAAAGTTGTGGTGTCGGGTGCCCCCGGAGCCTGGCGAAGGTTGCACACCAGGCGGGTGGGTATCCACAGAAGGTCGATTGTCAGCCTCAACCTTAACCCGCGTGCGCTGAGCCGCATTCACCACAACGCTAAGGAt                               >  1:991523/1‑140 (MQ=255)

                                                                                                            cATAAAGTTGTGGTGTCGGGTGCCCCCGGAGCCTGGCGAAGGTTGCACACCAGGCGGGTGGGTATCCACAGAAGGTCGATTGTCAGCCTCAACCTTAACCCGCGTGCGCTGAGCCGCATTCACcaca                                          <  1:1200684/127‑1 (MQ=255)

                                                                                                            cATAAAGTTGTGGTGTCGGGTGCCCCCGGAGCCTGGCGAAGGTTGCACACCAGGCGGGTGGGTATCCACAGAAGGTCGATTGTCAGCCTCAACCTTAACCCGCGTGCGCTGAGCCGCATTCACcaca                                          >  2:1200684/1‑127 (MQ=255)

                                                                                                            cATAAAGTTGTGGTGTCGGGTGCCCCCGGAGCCTGGCGAAGGTTGCACACCAGGCGGGTGGGTATCCACAGAAGGTCGATTGTCAGCCTCAACCTTAACCCGCGTGCGCTGAGCCGCATTCACCACAACGCTAAGGAT‑‑tc                           >  2:1147355/1‑140 (MQ=255)

                                                                                                             aTAAAGTTGTGGTGTCGGGTGCCCCCGGAGCCTGGCGAAGGTTGCACACCAGGCGGGTGGGTATCCACAGAAGGTCGATTGTCAGCCTCAACCTTAACCCGCGTGCGCTGAGCCGCATTCACCACAACGCTAAGGAT‑‑tct                          >  2:114267/1‑140 (MQ=255)

                                                                                                               aaaGTTGTGGTGTCGGGTGCCCCCGGAGCCTGGCGAAGGTTGCACACCAGGCGGGTGGGTATCCACAGAAGGTCGATTGTCAGCCTCAACCTTAACCCGCGTGCGCTGAGCCGCATTCACCACAACGCTAAGGAT‑‑tctct                        >  1:942126/1‑140 (MQ=255)

                                                                                                               aaaGTTGTGGTGTCGGGTGCCCCCGGAGCCTGGCGAAGGTTGCACACCAGGCGGGTGGGTATCCACAGAAGGTCGATTGTCAGCCTCAACCTTAACCCGCGTGCGCTGAGCCGCATTCACCACAACGCTAAGGAT‑‑tctct                        <  2:786333/140‑1 (MQ=255)

                                                                                                                  gTTGTGGTGTCGGGTGCCCCCGGAGCCTGGCGAAGGTTGCACACCAGGCGGGTGGGTATCCACAGAAGGTCGATTGTCAGCCTCAACCTTAACCCGCGTGCGCTGAGCCGCATTCACCACAACGCTAAGGAT‑‑TCTCTCTg                     <  2:830070/140‑1 (MQ=255)

                                                                                                                    tgtgGTGTCGGGTGCCCCCGGAGCCTGGCGAAGGTTGCACACCAGGCGGGTGGGTATCCACAGAAGGTCGATTGTCAGCCTCAACCTTAACCCGCGTGCGCTGAGCCGCATTCACCACAACGc                                      <  2:247276/123‑1 (MQ=255)

                                                                                                                    tgtgGTGTCGGGTGCCCCCGGAGCCTGGCGAAGGTTGCACACCAGGCGGGTGGGTATCCACAGAAGGTCGATTGTCAGCCTCAACCTTAACCCGCGTGCGCTGAGCCGCATTCACCACAACGCTAAGGAT‑‑TCTCTCTGGt                   <  1:1289098/140‑1 (MQ=255)

                                                                                                                    tgtgGTGTCGGGTGCCCCCGGAGCCTGGCGAAGGTTGCACACCAGGCGGGTGGGTATCCACAGAAGGTCGATTGTCAGCCTCAACCTTAACCCGCGTGCGCTGAGCCGCATTCACCACAACGCTAAGGAT‑‑TCTCTCTGGt                   <  1:699838/140‑1 (MQ=255)

                                                                                                                      tggtgTCGGGTGCCCCCGGAGCCTGGCGAAGGTTGCACACCAGGCGGGTGGGTATCCACAGAAGGTCGATTGTCAGCCTCAACCTTAACCCGCGTGCGCTGAGCCGCATTCGCCACAACGCTAAGGAT‑‑TCTCTCTGGTTg                 >  1:849606/1‑140 (MQ=255)

                                                                                                                      tggtgTCGGGTGCCCCCGGAGCCTGGCGAAGGTTGCACACCAGGCGGGTGGGTATCCACAGAAGGTCGATTGTCAGCCTCAACCTTAACCCGCGTGCGCTGAGCCGCATTCACCACAACGCTAAGGAT‑‑TCTCTCTGGTTg                 >  2:80104/1‑140 (MQ=255)

                                                                                                                      tggtgTCGGGTGCCCCCGGAGCCTGGCGAAGGTTGCACACCAGGCGGGTGGGTATCCACAGAAGGTCGATTGTCAGCCTCAACCTTAACCCGCGTGCGCTGAGCCGCATTCACCACAACGCTAAGGAT‑‑TCTCTCTGGTTg                 >  1:853644/1‑140 (MQ=255)

                                                                                                                       ggtgTCGGGTGCCCCCGGAGCCTGGCGAAGGTTGCACACCAGGCGGGTGGGTATCCACAGAAGGTCGATTGTCAGCCTCAACCTTAACCCGCGTGCGCTGAGCCGCATTCACCACAACGCTAAGGAT‑‑TCTCTCTGGTTGa                <  1:1256276/140‑1 (MQ=255)

                                                                                                                          gtCGGGTGCCCCCGGAGCCTGGCGAAGGTTGCACACCAGGCGGGTGGGTATCCACAGAAGGTCGATTGTCAGCCTCAACCTTAACCCGCGTGCGCTGAGCCGCATTCACCACAACGCTAAGGAT‑‑TCTCTCTGGTTGaaaa             <  2:144376/140‑1 (MQ=255)

                                                                                                                           tCGGGTGCCCCCGGAGCCTGGCGAAGGTTGCACACCAGGCGGGTGGGTATCCACAGAAGGTCGATTGTCAGCCTCAACCTTAACCCGCGTGCGCTGAGCCGCATTCACCACAACGCTAAGGATTCTCTCTCTGGTTGaaa              >  2:1193787/1‑140 (MQ=255)

                                                                                                                             gggTGCCCCCGGAGCCTGGCGAAGGTTGCACACCAGGCGGGTGGGTATCCACAGAAGGTCGATTGTCAGCCTCAACCTTAACCCGCGTGCGCTGAGCCGCATTCACCACAACGCTAAGGAT‑‑TCTCTCTGGTTGAAAATAc          >  2:540892/1‑140 (MQ=255)

                                                                                                                              ggTGCCCCCGGAGCCTGGCGAAGGTTGCACACCAGGCGGGTGGGTATCCACAGAAGGTCGATTGTCAGCCTCAACCTTAACCCGCGTGCGCTGAGCCGCATTCACCACAACGCTAAGGAT‑‑TCTCTCTGGTTGAAAATACt         <  2:71831/140‑1 (MQ=255)

                                                                                                                              ggTGCCCCCGGAGCCTGGCGAAGGTTGCACACCAGGCGGGTGGGTATCCACAGAAGGTCGATTGTCAGCCTCAACCTTAACCCGCGTGCGCTGAGCCGCATTCACCACAACGCTAAGGAT‑‑TCTCTCTGGTTGAAAATACt         <  1:493332/140‑1 (MQ=255)

                                                                                                                                  cccccGGAGCCTGGCGAAGGTTGCACACCAGGCGGGTGGGTATCCACAGAAGGTCGATTGTCAGCCTCAACCTTAACCCGCGTGCGCTGAGCCGCATTCACCACAACGCTAAGGAT‑‑TCTCTCTGGTTGAAAATACTTAGc     <  2:656415/140‑1 (MQ=255)

                                                                                                                                     ccGGAGCCTGGCGAAGGTTGCACACCAGGCGGGTGGGTATCCACAGAAGGTCGATTGTCAGCCTCAACCTTAACCCGCGTGCGCTGAGCCGCATTCACCACAACGCTAAGGAT‑‑TCTCTCTGGTTGAAAATACTTAGCTGt  >  2:540010/1‑140 (MQ=255)

GGGTCGGGTTATTAACCCGTCATCCGGGGATACTCTTCTCTGTTTTGTAAAAAGGGCGGTACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGTGCCTGGCGAAGGTTGCACACCAGGCGGGTGGGTATCCACAGAAGGTCGATTGTCAGCCTCAACCTTAACCCGCGTGCGCTGAGCCGCATTCACCACAACGCTAAGGAT‑‑TCTCTCTGGTTGAAAATACTTAGCTGT  >  NC_000913/1201147‑1201419

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`