| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 1,092,683 | IS5 (–) +4 bp | intergenic (‑394/‑190) | pgaA ← / → dgcT | partially deacetylated poly‑beta‑1,6‑N‑acetyl‑D‑glucosamine outer membrane porin/putative diguanylate cyclase DgcT |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1092683 = | 0 (0.000) | 30 (1.230) | 24/276 | 0.1 | 100% | intergenic (‑394/‑193) | pgaA/dgcT | partially deacetylated poly‑beta‑1,6‑N‑acetyl‑D‑glucosamine outer membrane porin/putative diguanylate cyclase DgcT |
| ? | NC_000913 | 1299499 = | NA (NA) | noncoding (1/1195 nt) | IS5 | repeat region | |||||
| * | ? | NC_000913 | = 1092686 | 0 (0.000) | 26 (1.070) | 19/276 | 0.3 | 100% | intergenic (‑397/‑190) | pgaA/dgcT | partially deacetylated poly‑beta‑1,6‑N‑acetyl‑D‑glucosamine outer membrane porin/putative diguanylate cyclase DgcT |
| ? | NC_000913 | = 1300693 | NA (NA) | noncoding (1195/1195 nt) | IS5 | repeat region | |||||
TGTACTGTTGTCAATATGAAATTCCGCCCACAAACAATACCGATGATGATAGTTGCTGAATGTAATTATTATTGCCTAAGTGCTTTATACATTGTTTGCAACAAGCCAGGCTTGAAAATACTTATAAATGGTTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/1092817‑1092683‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTT > NC_000913/1299499‑1299636 TGTACTGTTGTCAATATGAAATTCCGCCCACAAACAATACCGATGATGATAGTTGCTGAATGTAATTATTATTGCCTAAGTGCTTTATACATTGTTTGCAACAAGCCAGGCTTGAAAATACTTATAAATGGTTATGGAAG > 1:256089/1‑140 TACTGTTGTCAATATGAAATTCCGCCCACAAACAATACCGATGATGATAGTTGCTGAATGTAATTATTATTGCCTAAGTGCTTTATACATTGTTTGCAACAAGCCAGGCTTGAAAATACTTATAAATGGTTATGGAAGGT > 1:144838/1‑140 CTGTTGTCAATATGAAATTCCGCCCACAAACAATACCGATGATGATAGTTGCTGAATGTAATTATTATTGCCTAAGTGCTTTATACATTGTTTGCAACAAGCCAGGCTTGAAAATACTTATAAATGGTTATGGAAGGTGC < 2:211861/140‑1 TTGTCAATATGAAATTCCGCCCACAAACAATACCGATGATGATAGTTGCTGAATGTAATTATTATTGCCTAAGTGCTTTATACATTGTTTGCAACAAGCCAGGCTTGAAAATACTTATAAATGGTTATGGAAGGTGCGAA > 2:63149/1‑140 TTGTCAATATGAAATTCCGCCCACAAACAATACCGATGATGATAGTTGCTGAATGTAATTATTATTGCCTAAGTGCTTTATACATTGTTTGCAACAAGCCAGGCTTGAAAATACTTATAAATGGTTATGGAAGGTGCGAA > 2:348658/1‑140 AATATGAAATTCCGCCCACAAACAATACCGATGATGATAGTTGCTGAATGTAATTATTATTGCCTAAGTGCTTTATACATTGTTTGCAACAAGCCAGGCTTGAAAATACTTATAAATGGTTATGGAAGGTGCGAACAAGT > 2:138517/1‑140 ATATGAAATTCCGCCCACAAACAATACCGATGATGATAGTTGCTGAATGTAATTATTATTGCCTAAGTGCTTTATACATTGTTTGCAACAAGCCAGGCTTGAAAATACTTATAAATGGTTATGGAAGGTGCGAACAAGTC < 2:256089/140‑1 TATGAAATTCCGCCCACAAACAATACCGATGATGATAGTTGCTGAATGTAATTATTATTGCCTAAGTGCTTTATACATTGTTTGCAACAAGCCAGGCTTGAAAATACTTATAAATGGTTATGGAAGGTGCGAACAAGTCC < 1:138162/140‑1 TGAAATTCCGCCCACAAACAATACCGATGATGATAGTTGCTGAATGTAATTATTATTGCCTAAGTGCTTTATACATTGTTTGCAACAAGCCAGGCTTGAAAATACTTATAAATGGTTATGGAAGGTGCGAACAAGTCCCT < 2:144838/140‑1 CCACAAACAATACCGATGATGATAGTTGCTGAATGTAATTATTATTGCCTAAGTGCTTTATACATTGTTTGCAACAAGCCAGGCTTGAAAATACTTATAAATGGTTATGGAAGGTGCGAACAAGTCCCTGATATGAGATC < 1:348588/140‑1 ATGATGATAGTTGCTGAATGTAATTATTATTGCCTAAGTGCTTTATACATTGTTTGCAACAAGCCAGGCTTGAAAATACTTATAAATGGTTATGGAAGGTGCGAACAAGTCCCGGATATGAGATCATGTTTGTCATCTGG < 2:351116/140‑1 GATGATAGTTGCTGAATGTAATTATTATTGCCTAAGTGCTTTATACATTGTTTGCAACAAGCCAGGCTTGAAAATACTTATAAATGGTTATGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAG < 1:138517/140‑1 GATGATAGTTGCTGAATGTAATTATTATTGCCTAAGTGCTTTATACATTGTTTGCAACAAGCCAGGCTTGAAAATACTTATAAATGGTTATGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAG < 2:421/140‑1 GATAGTTGCTGAATGTAATTATTATTGCCTAAGTGCTTTATACATTGTTTGCAACAAGCCAGGCTTGAAAATACTTATAAATGGTTATGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCA > 2:198382/1‑140 AGTTGCTGAATGTAATTATTATTGCCTAAGTGCTTTATACATTGTTTGCAACAAGCCAGGCTTGAAAATACTTATAAATGGTTATGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAG > 2:97523/1‑140 TAATTATTATTGCCTAAGTGCTTTATACATTGTTTGCAACAAGCCAGGCTTGAAAATACTTATAAATGGTTATGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCAT > 2:214698/1‑140 AATTATTATTGCCTAGGTGCTTTATACATTGTTTGCAACAAGCCAGGCTTGAAAATACTTATAAATGGTTATGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATC > 2:185905/1‑140 ATTGCCTAAGTGCTTTATACATTGTTTGCAACAAGCCAGGCTTGAAAATACTTATAAATGGTTATGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTC < 1:348658/140‑1 GCCTAAGTGCTTTATACATTGTTTGCAACAAGCCAGGCTTGAAAATACTTATAAATGGTTATGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATC > 2:126990/1‑140 ACATTGTTTGCAACAAGCCAGGCTTGAAAATACTTATAAATGGTTATGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCG < 2:366913/140‑1 TTGTTTGCAACAAGCCAGGCTTGAAAATACTTATAAATGGTTATGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACA < 1:185905/140‑1 GCAACAAGCCAGGCTTGAAAATACTTATAAATGGTTATGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACA < 1:323532/134‑1 GCAACAAGCCAGGCTTGAAAATACCTATAAATGGTTATGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACA > 2:323532/1‑134 CAACAAGCCAGGCTTGAAAATACTTATAAATGGTTATGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATT < 1:63149/140‑1 GCCAGGCTTGAAAATACTTATAAATGGTTATGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAG > 2:192892/1‑140 GGCTTGAAAATACTTATAAATGGTTATGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAG < 1:126990/140‑1 ACTTATAAATGGTTATGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGAC > 2:301515/1‑140 GTTATGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGA > 1:103095/1‑140 TTATGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGAT > 1:115517/1‑140 ATGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTT > 2:280706/1‑140 TGTACTGTTGTCAATATGAAATTCCGCCCACAAACAATACCGATGATGATAGTTGCTGAATGTAATTATTATTGCCTAAGTGCTTTATACATTGTTTGCAACAAGCCAGGCTTGAAAATACTTATAAATGGTTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/1092817‑1092683‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTT > NC_000913/1299499‑1299636 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |