Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 982,195 C→A A383A (GCC→GCA)  ldtD → L,D‑transpeptidase LdtD

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913982,1950CA100.0% 126.6 / NA 37A383A (GCC→GCA) ldtDL,D‑transpeptidase LdtD
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base A (17/20);  total (17/20)

ATTGGCCCGGCAACACGTGACTGGTTAAACGTAACGCCCGCCCAGCGTGCTGGTGTGTTGGCTCTCAACATCCAGCGATTGCGCTTGCTGCCAACAGAGCTTTCTACCGGGATCATGGTTAACATTCCGGCCTATTCGCTGGTCTACTATCAGAACGGCAATCAGGTGCTGGATTCGCGAGTCATTGTCGGTCGCCCCGATCGCAAAACGCCGATGATGAGCAGTGCCCTTAACAACGTAGTGGTAAACCCGCCGTGGAACGTACC  >  NC_000913/982064‑982329
                                                                                                                                   |                                                                                                                                      
aTTGGCCCGGCAACACGTGACTGGTTAAACGTAACGCCCGCCCAGCGTGCTGGTGTGTTGGCTCTCAACATCCAGCGATTGCGCTTGCTGCCAACAGAGCTTTCTACCGGGATCATGGTTAACATTCCGGCATATTCGCt                                                                                                                                <  2:607036/140‑1 (MQ=255)
   ggCCCGGCAACACGTGACTGGTTAAACGTAACGCCCGCCCAGCGTGCTGGTGTGTTGGCTCTCAACATCCAGCGATTGTGCTTGCTGCCAACAGAGCTTTCTACCGGGATCATGGTTAACATTCCGGCATATTCGCTGGt                                                                                                                             <  1:580108/140‑1 (MQ=255)
   ggCCCGGCAACACGTGACTGGTTAAACGTAACGCCCGCCCAGCGTGCTGGTGTGTTGGCTCTCAACATCCAGCGATTGCGCTTGCTGCCAACAGAGCTTTCTACCGGGATCATGGTTAACATTCCGGCATATTCGCTGGt                                                                                                                             <  2:514463/140‑1 (MQ=255)
    gCCCGGCAACACGTGACTGGTTAAACGTAACGCCCGCCCAGCGTGCTGGTGTGTTGGCTCTCAACATCCAGCGATTGCGCTTGCTGCCAACAGAGCTTTCTACCGGGATCATGGTTAACATTCCGGCATATTCGCt                                                                                                                                <  1:321170/136‑1 (MQ=255)
    gCCCGGCAACACGTGACTGGTTAAACGTAACGCCCGCCCAGCGTGCTGGTGTGTTGGCTCTCAACATCCAGCGATTGCGCTTGCTGCCAACAGAGCTTTCTACCGGGATCATGGTTAACATTCCGGCATATTCGCt                                                                                                                                >  2:321170/1‑136 (MQ=255)
     cccGGCAACACGTGACTGGTTAAACGTAACGCCCGCCCAGCGTGCTGGTGTGTTGGCTCTCAACATCCAGCGATTGCGCTTGCTGCCAACAGAGCTTTCTACCGGGATCATGGTTAACATTCCGGCATATTCGCTGGTct                                                                                                                           <  1:235855/140‑1 (MQ=255)
      ccGGCAACACGTGACTGGTTAAACGTAACGCCCGCCCAGCGTGCTGGTGTGTTGGCTCTCAACATCCAGCGATTGCGCTTGCTGCCAACAGAGCTTTCTACCGGGATCATGGTTAACATTCCGGCATATTCGCTGGTcta                                                                                                                          >  2:526527/1‑140 (MQ=255)
      ccGGCAACACGTGACTGGTTAAACGTAACGCCCGCCCAGCGTGCTGGTGTGTTGGCTCTCAACATCCAGCGATTGCGCTTGCTGCCAACAGAGCTTTCTACCGGGATCATGGTTAACATTCCGGCATATTCGCTGGTcta                                                                                                                          >  1:320452/1‑140 (MQ=255)
               cGTGACTGGTTAAACGTAACGCCCGCCCAGCGTGCTGGTGTGTTGGCTCTCAACATCCAGCGATTGCGCTTGCTGCCAACAGAGCTTTCTACCGGGATCATGGTTAACATTCCGGCATATTCGCTGGTCTACTATCAGaa                                                                                                                 <  1:627892/140‑1 (MQ=255)
                    cTGGTTAAACGTAACGCCCGCCCAGCGTGCTGGTGTGTTGGCTCTCAACATCCAGCGATTGCGCTTGCTGCCAACAGAGCTTTCTACCGGGATCATGGTTAACATTCCGGCATATTCGCTGGTCTACTATCAGAACGGCa                                                                                                            >  2:349822/1‑140 (MQ=255)
                       gTTAAACGTAACGCCCGCCCAGCGTGCTGGTGTGTTGGCTCTCAACATCCAGCGATTGCGCTTGCTGCCAACAGAGCTTTCTACCGGGATCATGGTTAACATTCCGGCATATTCGCTGGTCTACTATCAGAACGGCAATc                                                                                                         <  2:320452/140‑1 (MQ=255)
                          aaaCGTAACGCCCGCCCAGCGTGCTGGTGTGTTGGCTCTCAACATCCAGCGATTGCGCTTGCTGCCAACAGAGCTTTCTACCGGGATCATGGTTAACATTCCGGCATATTCGCTGGTCTACTATCAGAACGGCAATCAgg                                                                                                      <  2:298186/140‑1 (MQ=255)
                                 aCGCCCGCCCAGCGTGCTGGTGTGTTGGCTCTCAACATCCAGCGATTGCGCTTGCTGCCAACAGAGCTTTCTACCGGGATCATGGTTAACATTCCGGCATATTCGCTGGTCTACTATCAGAACGGCAATCAGGTGCTGGa                                                                                               >  1:194691/1‑140 (MQ=255)
                                  cgcccgccCAGCGTGCTGGTGTGTTGGCTCTCAACATCCAGCGATTGCGCTTGCTGCCAACAGAGCTTTCTACCGGGATCATGGTTAACATTCCGGCATATTCGCTGGTCTACTATCAGAACGGCAATCAGGTGCTGGAt                                                                                              >  1:94617/1‑140 (MQ=255)
                                      cgcccAGCGTGCTGGTGTGTTGGCTCTCAACATCCAGCGATTGCGCTTGCTGCCAACAGAGCTTTCTACCGGGATCATGGTTAACATTCCGGCATATTCGCTGGTCTACTATCAGAACGGCAATCAGGTGCTGGATTcgc                                                                                          <  1:357788/140‑1 (MQ=255)
                                        cccAGCGTGCTGGTGTGTTGGCTCTCAACATCCAGCGATTGCGCTTGCTGCCAACAGAGCTTTCTACCGGGATCATGGTTAACATTCCGGCATATTCGCTGGTCTACTATCAGAACGGCAATCAGGTGCTGGATTCGCGa                                                                                        >  2:348479/1‑140 (MQ=255)
                                             cGTGCTGGTGTGTTGGCTCTCAACATCCAGCGATTGCGCTTGCTGCCAACAGAGCTTTCTACCGGGATCATGGTTAACATTCCGGCATATTCGCTGGTCTACTATCAGAACGGCAATCAGGTGCTGGATTCGCGAGTCAt                                                                                   >  1:553771/1‑140 (MQ=255)
                                                  tGGTGTGTTGGCTCTCAACATCCAGCGATTGCGCTTGCTGCCAACAGAGCTTTCTACCGGGATCATGGTTAACATTCCGGCATATTCGCTGGTCTACTATCAGAACGGCAATCAGGTGCTGGATTCGCGAGTCATTgtcg                                                                              >  2:537540/1‑140 (MQ=255)
                                                        gtTGGCTCTCAACATCCAGCGATTGCGCTTGCTGCCAACAGAGCTTTCTACCGGGATCATGGTTAACATTCCGGCATATTCGCTGGTCTACTATCAGAACGGCAATCAGGTGCTGGATTCGCGAGTCATTGTCGGTCGcc                                                                        <  2:174629/140‑1 (MQ=255)
                                                              tctcAACATCCAGCGATTGCGCTTGCTGCCAACAGAGCTTTCTACCGGGATCATGGTTAACATTCCGGCATATTCGCTGGTCTACTATCAGAACGGCAATCAGGTGCTGGATTCGCGAGTCATTGTCGGTCGCCCCGATc                                                                  >  1:343572/1‑140 (MQ=255)
                                                                 cAACATCCAGCGATTGCGCTTGCTGCCAACAGAGCTTTCTACCGGGATCATGGTTAACATTCCGGCATATTCGCTGGTCTACTATCAGAACGGCAATCAGGTGCTGGATTCGCGAGTCATTGTCGGTCGCCCCGATCGCa                                                               >  2:221879/1‑140 (MQ=255)
                                                                       ccAGCGATTGCGCTTGCTGCCAACAGAGCTTTCTACCGGGATCATGGTTAACATTCCGGCATATTCGCTGGTCTACTATCAGAACGGCAATCAGGTGCTGGATTCGCGAGTCATTGTCGGTCGCCCCGATCGCAAAACGc                                                         <  1:348479/140‑1 (MQ=255)
                                                                           cGATTGCGCTTGCTGCCAACAGAGCTTTCTACCGGGATCTTGGTTAACATTCCGGCATATTCGCTGGTCTACTATCAGAACGGCAATCAGGTGCTGGATTCGCGAGTCATTGTCGGTCGCCCCGa                                                                    <  1:225296/125‑1 (MQ=255)
                                                                           cGATTGCGCTTGCTGCCAACAGAGCTTTCTACCGGGATCATGGTTAACATTCCGGCATATTCGCTGGTCTACTATCAGAACGGCAATCAGGTGCTGGATTCGCGAGTCATTGTCGGTCGCCCCGa                                                                    >  2:225296/1‑125 (MQ=255)
                                                                              ttGCGCTTGCTGCCAACAGAGCTTTCTACCGGGATCATGGTTAACATTCCGGCATATTCGCTGGTCTACTATCAGAACGGCAATCAGGTGCTGGATTCGCGAGTCATTGTCGGTCGCCCCGATCGCAAAACGCCgatgat                                                  >  1:666251/1‑140 (MQ=255)
                                                                                 cgcTTGCTGCCAACAGAGCTTTCTACCGGGATCATGGTTAACATTCCGGCATATTCGCTGGTCTACTATCAGAACGGCAATCAGGTGCTGGATTCGCGAGTCATTGTCGGTCGCCCCGATCGCAAAACGCCGATGATGAg                                               <  1:586929/140‑1 (MQ=255)
                                                                                 cgcTTGCTGCCAACAGAGCTTTCTACCGGGATCATGGTTAACATTCCGGCATATTCGCTGGTCTACTATCAGAACGGCAATCAGGTGCTGGATTCGCGAGTCATTGTCGGTCGCCCCGATCGCAAAACGCCGATGATGAg                                               <  1:212800/140‑1 (MQ=255)
                                                                                        tgcCAACAGAGCTTTCTACCGGGATCATGGTTAACATTCCGGCATATTCGCTGGTCTACTATCAGAACGGCAATCAGGTGCTGGATTCGCGAGTCATTGTCGGTCGCCCCGATCGCAAAACGCCGATGATGAGCAGTGcc                                        <  2:343572/140‑1 (MQ=255)
                                                                                               agagCTTTCTACCGGGATCATGGTTAACATTCCGGCATATTCGCTGGTCTACTATCAGAACGGCAATCAGGTGCTGGATTCGCGAGTCATTGTCGGTCGCCCCGATCGCAAAACGCCGATGATGAGCAGTGCCCTTaaca                                 <  2:259235/140‑1 (MQ=255)
                                                                                                  gCTTTCTACCGGGATCATGGTTAACATTCCGGCATATTCGCTGGTCTACTATCAGAACGGCAATCAGGTGCTGGATTCGCGAGTCATTGTCGGTCGCCCCGATCGCAAAACGCCGATGATGAGCAGTGCCCTTAACAACg                              <  2:553771/140‑1 (MQ=255)
                                                                                                    tttCTACCGGGATCATGGTTAACATTCCGGCATATTCGCTGGTCTACTATCAGAACGGCAATCAGGTGCTGGATTCGCGAGTCATTGTCGGTCGCCCCGATCGCAAAACGCCGATGATGAGCAGTGCCCTTAACAACGTa                            >  2:617358/1‑140 (MQ=255)
                                                                                                           cGGGGTCATGGTTAACATTCCGGCATATTCGCTGGTCTACTATCAGAACGGCAATCAGGTGCTGGATTCGCGAGTCATTGTCGGTCGCCCCGATCGCAAAACGCCGATGATGAGCAGTGCCCTTAACAACGTAGTGGTaa                     >  1:135134/1‑140 (MQ=255)
                                                                                                              gATCATGGTTAACATTCCGGCATATTCGCTGGTCTACTATCAGAACGGCAATCAGGTGCTGGATTCGCGAGTCATTGTCGGTCGCCCCGATCGCAAAACGCCGATGATGAGCAGTGCCCTTAACAACGTAGTGGTAAAcc                  <  1:207874/140‑1 (MQ=255)
                                                                                                                   tGGTTAACATTCCGGCATATTCGCTGGTCTACTATCAGAACGGCAATCAGGTGCTGGATTCGCGAGTCATTGTCGGTCGCCCCGATCGCAAAACGCCGATGATGAGCAGTGCCCTTAACAACGTAGTGGTAAACccgccg             <  1:537540/140‑1 (MQ=255)
                                                                                                                     gTTAACTTCCCGACTTGTTCGCTGGTCTCCTATCAGAACGGCAATCAGGTTCTGGATTCGCGAGTCTTGGTCGGTCCCCCGGCTCGCAAAACGCCGATGATGAGCAGGCCCTTTAACAACGTAGTGGTAAACCCGCCGTg           <  2:194691/140‑1 (MQ=255)
                                                                                                                           aTTCCGGCATATTCGCTGGTCTACTATCAGAACGGCAATCAGGTGCTGGATTCGCGAGTCATTGTCGGTCGCCCCGATCGCAAAACGCCGATGATGAGCAGTGCCCTTAACAACGTAGTGGTAACCCCGCCGTGGAACGt     <  2:666251/140‑1 (MQ=255)
                                                                                                                              ccGGCATATTCGCTGGTCTACTATCAGAACGGCAATCAGGTGCTGGATTCGCGAGTCATTGTCGGTCGCCCCGATCGCAAAACGCCGATGATGAGCAGTGCCCTTAACAACGTAGTGGTAAACCCGCCGTGGAACGTAcc  >  1:597639/1‑140 (MQ=255)
                                                                                                                               cGGCATATTCGCTGGTCTACTATCAGAACGGCAATCAGGTGCTGGATTCGCGAGTCATTGTCGGTCGCCCCGATCGCAAAACGCCGATGATGAGCAGTGCCCTTAACAACGTAGTGGTAAACCCGCCGTGGAAc       <  1:509939/134‑1 (MQ=255)
                                                                                                                               cGGCATATTCGCTGGTCTACTATCAGAACGGCAATCAGGTGCTGGATTCGCGAGTCATTGTCGGTCGCCCCGATCGCAAAACGCCGATGATGAGCAGTGCCCTTAACAACGTAGTGGTAAACCCGCCGTGGAAc       >  2:509939/1‑134 (MQ=255)
                                                                                                                                   |                                                                                                                                      
ATTGGCCCGGCAACACGTGACTGGTTAAACGTAACGCCCGCCCAGCGTGCTGGTGTGTTGGCTCTCAACATCCAGCGATTGCGCTTGCTGCCAACAGAGCTTTCTACCGGGATCATGGTTAACATTCCGGCCTATTCGCTGGTCTACTATCAGAACGGCAATCAGGTGCTGGATTCGCGAGTCATTGTCGGTCGCCCCGATCGCAAAACGCCGATGATGAGCAGTGCCCTTAACAACGTAGTGGTAAACCCGCCGTGGAACGTACC  >  NC_000913/982064‑982329

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑