BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	46,053	C→A	R83S (CGC→AGC)	yaaU →	putative transporter YaaU

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	46,053	0	C	A	100.0%	598.8 / NA	164	R83S (CGC→AGC)	yaaU	putative transporter YaaU
Reads supporting (aligned to +/- strand): ref base C (0/0); new base A (68/96); total (68/96)

Only 100 of 167 total aligned reads displayed.

TGGCGTGGCGCTGGAGCAACTGACGCCGGCGCTGAAACTGGACGCTGACTGGATTGGCTTGCTGGGCGCGGGAACGCTCGCCGGGCTGTTCGTTGGCACATCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGCGCAAAATGTTCCTCATTGATATCATCGCCATCGGCGTGATATCGGTGGCGACGATGTTTGTTTCATCCCCCGTCGAACTGTTGGTGATGCGGGTACTTATCGGCATTGTCATCGGTGCAGATTATCCCATCGCC  >  NC_000913/45917‑46187

tggcgtggcgCTGGAGCAACTGACGCCGGCGCTGAAACTGGACGCTGACTGGATTGGCTTGCTGGGCGCGGGAACGCTCGCCGGGCTGTTCGTTGGCACATCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGAGCa                                                                                                                                     <  1:647169/140‑1 (MQ=255)

  gcgtggcgCTGGAGCAACTGACGCCGGCGCTGAAACTGGACGCTGACTGGATTGGCTTGCTGGGCGCGGGAACGCTCGCCGGGCTGTTCGTTGGCACATCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGAGCaaa                                                                                                                                   >  2:1949996/1‑140 (MQ=255)

     tggcgCTGGAGCAACTGACGCCGGCGCTGAAACTGGACGCTGACTGGATTGGCTTGCTGGGCGCGGGAACGCTCGCCGGGCTGTTCGTTGGCACATCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGAGCAAAATg                                                                                                                                >  2:114907/1‑140 (MQ=255)

        cgcTGGAGCAACTGACGCCGGCGCTGAAACTGGACGCTGACTGGATTGGCTTGCTGGGCGCGGGAACGCTCGCCGGGCTGTTCGTTGGCACATCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGAGCAAAATGTTc                                                                                                                             <  1:257967/140‑1 (MQ=255)

        cgcTGGAGCAACTGACGCCGGCGCTGAAACTGGACGCTGACTGGATTGGCTTGCTGGGCGCGGGAACGCTCGCCGGGCTGTTCGTTGGCACATCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGAGCAAAATGTTc                                                                                                                             >  2:88699/1‑140 (MQ=255)

        cgcTGGAGCAACTGACGCCGGCGCTGAAACTGGACGCTGACTGGATTGGCTTGCTGGGCGCGGGAACGCTCGCCGGGCTGTTCGTTGGCACATCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGAGCAAAATGTTc                                                                                                                             <  1:1400560/140‑1 (MQ=255)

         gcTGGAGCAACTGACGCCGGCGCTGAAACTGGACGCTGACTGGATTGGCTTGCTGGGCGCGGGAACGCTCGCCGGGCTGTTCGTTGGCACATCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGAGCAAAATGTTcc                                                                                                                            <  1:1810688/140‑1 (MQ=255)

         gcTGGAGCAACTGACGCCGGCGCTGAAACTGGACGCTGACTGGATTGGCTTGCTGGGCGCGGGAACGCTCGCCGGGCTGTTCGTTGGCACATCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGAGCAAAATGTTcc                                                                                                                            <  2:1935871/140‑1 (MQ=255)

         gcTGGAGCAACTGACGCCGGCGCTGAAACTGGACGCTGACTGGATTGGCTTGCTGGGCGCGGGAACGCTCGCCGGGCTGTTCGTTGGCACATCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGAGCAAAATGTTcc                                                                                                                            <  1:1355207/140‑1 (MQ=255)

         gcTGGAGCAACTGACGCCGGCGCTGAAACTGGACGCTGACTGGATTGGCTTGCTGGGCGCGGGAACGCTCGCCGGGCTGTTCGTTGGCACATCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGAGCAAAATGTTcc                                                                                                                            <  2:2392997/140‑1 (MQ=255)

         gcTGGAGCAACTGACGCCGGCGCTGAAACTGGACGCTGACTGGATTGGCTTGCTGGGCGCGGGAACGCTCGCCGGGCTGTTCGTTGGCACATCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGAGCAAAATGTTcc                                                                                                                            <  1:2515188/140‑1 (MQ=255)

         gcTGGAGCAACTGACGCCGGCGCTGAAACTGGACGCTGACTGGATTGGCTTGCTGGGCGCGGGAACGCTCGCCGGGCTGTTCGTTGGCACATCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGAGCAAAATGTTcc                                                                                                                            <  1:1050941/140‑1 (MQ=255)

                          cGGCGCTGAAACTGGACGCTGACTGGATTGGCTTGCTGGGCGCGGGAACGCTCGCCGGGCTGTTCGTTGGCACATCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGAGCAAAATGTTCCTCATTGATATCATCGcc                                                                                                           >  1:550926/1‑140 (MQ=255)

                           ggCGCTGAAACTGGACGCTGACTGGATTGGCTTGCTGGGCGCGGGAACGCTCGCCGGGCTGTTCGTTGGCACATCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGAGCAAAATGTTCCTCATTGATATCATCGCCa                                                                                                          <  2:2518287/140‑1 (MQ=255)

                            gcgcTGAAACTGGACGCTGACTGGATTGGCTTGCTGGGCGCGGGAACGCTCGCCGGGCTGTTCGTTGGCACATCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGAGCAAAATGTTCCTCATTGATATCATCGCCAt                                                                                                         <  1:296579/140‑1 (MQ=255)

                            gcgcTGAAACTGGACGCTGACTGGATTGGCTTGCTGGGCGCGGGAACGCTCGCCGGGCTGTTCGTTGGCACATCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGAGCAAAATGTTCCTCATTGATATCATCGCCAt                                                                                                         <  2:1783751/140‑1 (MQ=255)

                            gcgcTGAAACTGGACGCTGACTGGATTGGCTTGCTGGGCGCGGGAACGCTCGCCGGGCTGTTCGTTGGCACATCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGAGCAAAATGTTCCTCATTGATATCATCGCCAt                                                                                                         <  2:1427069/140‑1 (MQ=255)

                            gcgcTGAAACTGGACGCTGACTGGATTGGCTTGCTGGGCGCGGGAACGCTCGCCGGGCTGTTCGTTGGCACATCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGAGCAAAATGTTCCTCATTGATATCATCGCCAt                                                                                                         <  1:191933/140‑1 (MQ=255)

                            gcgcTGAAACTGGACGCTGACTGGATTGGCTTGCTGGGCGCGGGAACGCTCGCCGGGCTGTTCGTTGGCACATCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGAGCAAAATGTTCCTCATTGATATCATCGCCAt                                                                                                         <  1:951696/140‑1 (MQ=255)

                             cgcTGAAACTGGACGCTGACTGGATTGGCTTGCTGGGCGCGGGAACGCTCGCCGGGCTGTTCGTTGGCACATCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGAGCAAAATGTTCCTCATTGATATCATCGCCATc                                                                                                        >  1:1024207/1‑140 (MQ=255)

                             cgcTGAAACTGGACGCTGACTGGATTGGCTTGCTGGGCGCGGGAACGCTCGCCGGGCTGTTCGTTGGCACATCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGAGCAAAATGTTCCTCATTGATATCATCGCCATc                                                                                                        >  2:1833589/1‑140 (MQ=255)

                             cgcTGAAACTGGACGCTGACTGGATTGGCTTGCTGGGCGCGGGAACGCTCGCCGGGCTGTTCGTTGGCACATCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGAGCAAAATGTTCCTCATTGATATCATCGCCATc                                                                                                        >  2:791702/1‑140 (MQ=255)

                              gcTGAAACTGGACGCTGACTGGATTGGCTTGCTGGGCGCGGGAACGCTCCCCGGGCTGTTCGTTGGCACATCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGAGCAAAATGTTCCTCATTGATATCATCGCCATCg                                                                                                       >  2:1389492/1‑140 (MQ=255)

                                        gACGCTGACTGGATTGGCTTGCTGGGCGC‑GGAACGCTCGCCGGGCTGTTCGTTGGCACATCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGAGCAAAATGTTCCTCATTGATATCATCGCCa                                                                                                          <  2:1227059/126‑1 (MQ=255)

                                          cGCTGACTGGATTGGCTTGCTTGGCGCGGGAACGCTCGCCGGGCTGTTCGTTGGCACATCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGAGCAAAATGTTCCTCATTGATATCATCGCCATCGGCGTGATATCgg                                                                                           >  1:171099/1‑140 (MQ=255)

                                            cTGACTGGATTGGCTTGCTGGGCGCGGGAACGCTCGCCGGGCTGTTCGTTGGCACATCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGAGCAAAATGTTCCTCATTGATATCATCGCCATCGGCGTGATATCGGTg                                                                                         <  1:791702/140‑1 (MQ=255)

                                            cTGACTGGATTGGCTTGCTGGGCGCGGGAACGCTCGCCGGGCTGTTCGTTGGCACATCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGAGCAAAATGTTCCTCATTGATATCATCGCCATCGGCGTGATATCGGTg                                                                                         <  1:664493/140‑1 (MQ=255)

                                             tGACTGGATTGGCTTGCTGGGCGCGGGAACGCTCGCCGGGCTGTTCGTTGGCACATCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGAGCAAAATGTTCCTCATTGATATCATCGCCATCGGCGTGATATCGGTgg                                                                                        >  1:948989/1‑140 (MQ=255)

                                               aCTGGATTGGCTTGCTGGGCGCGGGAACGCTCGCCGGGCTGTTCGTTGGCACATCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGAGCAAAATGTTCCTCATTGATATCATCGCCATCGGCGTGATATCGGTGGcg                                                                                      >  1:344226/1‑140 (MQ=255)

                                                cTGGATTGGCTTGCTGGGCGCGGGAACGCTCGCCGGGCTGTTCGTTGGCACATCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGAGCAAAATGTTCCTCATTGATATCGTCGCCATCGGCGTGATATCGGTGGcga                                                                                     <  1:1108296/140‑1 (MQ=255)

                                                cTGGATTGGCTTGCTGGGCGCGGGAACGCTCGCCGGGCTGTTCGTTGGCACATCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGAGCAAAATGTTCCTCATTGATATCATCGCCATCGGCGTGATATCGGTGGcga                                                                                     <  2:462753/140‑1 (MQ=255)

                                                cTGGATTGGCTTGCTGGGCGCGGGAACGCTCGCCGGGCTGTTCGTTGGCACATCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGAGCAAAATGTTCCTCATTGATATCATCGCCATCGGCGTGATATCGGTGGcga                                                                                     <  1:2334529/140‑1 (MQ=255)

                                                cTGGATTGGCTTGCTGGGCGCGGGAACGCTCGCCGGGCTGTTCGTTGG‑‑CATCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGAGCAAAATGTTCCTCATTGATATCATCGCCATCGGCGTGATATCGGTGGcgacg                                                                                   <  2:2365474/140‑1 (MQ=255)

                                                 tGGATTGGCTTGCTGGGCGCGGGAACGCTCGCCGGGCTGTTCGTTGGCACATCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGAGCAAAATGTTCCTCATTGATATCATCGCCATCGGCGTGATATCGGTGGcgac                                                                                    <  1:1536024/140‑1 (MQ=255)

                                                  ggATTGGCTTGCTGGGCGCGGGAACGCTCGCCGGGCTGTTCGTTGGCACATCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGAGCAAAATGTTCCTCATTGATATCATCGCCATCGGCGTGATATCGGTGGcgacg                                                                                   <  2:1548633/140‑1 (MQ=255)

                                                  ggATTGGCTTGCTGGGCGCGGGAACGCTCGCCGGGCTGTTCGTTGGCACATCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGAGCAAAATGTTCCTCATTGATATCATCGCCATCGGCGTGATATCGGTGGcgacg                                                                                   <  2:2092286/140‑1 (MQ=255)

                                                  ggATTGGCTTGCTGGGCGCGGGAACGCTCGCCGGGCTGTTCGTTGGCACATCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGAGCAAAATGTTCCTCATTGATATCATCGCCATCGGCGTGATATCGGTGGcgacg                                                                                   <  2:344226/140‑1 (MQ=255)

                                                    aTTGGCTTGCTGGGCGCGGGAACGCTCGCCGGGCTGTTCGTTGGCACATCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGAGCAAAATGTTCCTCATTGATATCATCGCCATCGGCGTGATATCGGTGGCGACGAt                                                                                 >  2:2237808/1‑140 (MQ=255)

                                                      tGGCTTGCTGGGCGCGGGAACGCTCGCCGGGCTGTTCGTTGGCACATCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGAGCAAAATGTTCCTCATTGATATCATCGCCATCGGCGTGATATCGGTGGCGACGAtgt                                                                               <  1:335101/140‑1 (MQ=255)

                                                         cTTGCTGGGCGCGGGAACGCTCGCCGGGCTGTTCGTTGGCACATCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGAGCAAAATGTTCCTCATTGATATCATCGCCATCGGCGTGATATCGGTGGCGACGAtgtttg                                                                            >  1:2442342/1‑140 (MQ=255)

                                                         cTTGCTGGGCGCGGGAACGCTCGCCGGGCTGTTCGTTGGCACATCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGAGCAAAATGTTCCTCATTGATATCATCGCCATCGGCGTGATATCGGTGGCGACGAtgtttg                                                                            >  2:280145/1‑140 (MQ=255)

                                                         cTTGCTGGGCGCGGGAACGCTCGCCGGGCTGTTCGTTGGCACATCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGAGCAAAATGTTCCTCATTGATATCATCGCCATCGGCGTGATATCGGTGGCGACGAtgtttg                                                                            >  2:1970247/1‑140 (MQ=255)

                                                         cTTGCTGGGCGCGGGAACGCTCGCCGGGCTGTTCGTTGGCACATCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGAGCAAAATGTTCCTCATTGATATCATCGCCATCGGCGTGATATCGGTGGCGACGAtgtttg                                                                            >  1:312186/1‑140 (MQ=255)

                                                         cTTGCTGGGCGCGGGAACGCTCGCCGGGCTGTTCGTTGGCACATCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGAGCAAAATGTTCCTCATTGATATCATCGCCATCGGCGTGATATCGGTGGCGACGAtgtttg                                                                            >  1:2482356/1‑140 (MQ=255)

                                                             cTGGGCGCGGGAACGCTCGCCGGGCTGTTCGTTGGCACATCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGAGCAAAATGTTCCTCATTGATATCATCGCCATCGGCGTGATATCGGTGGcgacg                                                                                   >  2:389414/1‑129 (MQ=255)

                                                             cTGGGCGCGGGAACGCTCGCCGGGCTGTTCGTTGGCACATCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGAGCAAAATGTTCCTCATTGATATCATCGCCATCGGCGTGATATCGGTGGCGACGATGTTTGTTTc                                                                        >  2:1033045/1‑140 (MQ=255)

                                                                ggCGCGGGAACGCTCGCCGGGCTGTTCGTTGGCACATCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGAGCAAAATGTTCCTCATTGATATCATCGCCATCGGCGTGATATCGGTGGCGACGATGTTTGTTTCATc                                                                     >  2:1513161/1‑140 (MQ=255)

                                                                  cgcgGGAACGCTCGCCGGGCTGTTCGTTGGCACATCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGAGCAAAATGTTCCTCATTGATATCATCGCCATCGGCGTGATATCGGTGGcga                                                                                     <  1:69840/122‑1 (MQ=255)

                                                                  cgcgGGAACGCTCGCCGGGCTGTTCGTTGGCACATCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGAGCAAAATGTTCCTCATTGATATCATCGCCATCGGCGTGATATCGGTGGCGACGATGTTTGTTTCATccc                                                                   >  1:875319/1‑140 (MQ=255)

                                                                  cgcgGGAACGCTCGCCGGGCTGTTCGTTGGCACATCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGAGCAAAATGTTCCTCATTGATATCATCGCCATCGGCGTGATATCGGTGGCGACGATGTTTGTTTCATccc                                                                   <  2:312186/140‑1 (MQ=255)

                                                                  cgcgGGAACGCTCGCCGGGCTGTTCGTTGGCACATCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGAGCAAAATGTTCCTCATTGATATCATCGCCATCGGCGTGATATCGGTGGCGACGATGTTTGTTTCATccc                                                                   >  1:488956/1‑140 (MQ=255)

                                                                       gAACGCTCGCCGGGCTGTTCGTTGGCACATCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGAGCAAAATGTTCCTCATTGATATCATCGCCATCGGCGTGATATCGGTGGCGACGATGTTTGTTTCATCCCCCGTc                                                              >  2:1466961/1‑140 (MQ=255)

                                                                       gAACGCTCGCCGGGCTGTTCGTTGGCACATCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGAGCAAAATGTTCCTCATTGATATCATCGCCATCGGCGTGATATCGGTGGCGACGATGTTTGTTTCATCCCCCGTc                                                              <  1:167527/140‑1 (MQ=255)

                                                                         aCGCTCGCCGGGCTGTTCGTTGGCACATCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGAGCAAAATGTTCCTCATTGATATCATCGCCATCGGCGTGATATCGGTGGCGACGATGTTTGTTTCATCCCCCGTCGa                                                            <  1:1466961/140‑1 (MQ=255)

                                                                          cGCTCGCCGGGCTGTTCGTTGGCACATCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGAGCAAAATGTTCCTCATTGATATCATCGCCATCGGCGTGATATCGGTGGCGACGATGTTTGTTTCATCCCCCGTCGaa                                                           <  2:1023951/140‑1 (MQ=255)

                                                                           gCTCGCCGGGCTGTTCGTTGGCACATCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGAGCAAAATGTTCCTCATTGATATCATCGCCATCGGCGTGATATCGGTGGCGACGATGTCTGTTTCATCCCCCGTCGAAc                                                          <  2:171099/140‑1 (MQ=255)

                                                                                 cGGGCTGTTCGTTGGCACATCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGAGCAAAATGTTCCTCATTGATATCATCGCCATCGGCGTGATATCGGTGGCGACGATGTTTGTTTCATCCCCCGTCGAACTGTTgg                                                    >  2:648304/1‑140 (MQ=255)

                                                                                 cGGGCTGTTCGTTGGCACATCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGAGCAAAATGTTCCTCATTGATATCATCGCCATCGGCGTGATATCGGTGGCGACGATGTTTGTTTCATCCCCCGTCGAACTGTTgg                                                    >  2:14401/1‑140 (MQ=255)

                                                                                  gggCTGTTCGTTGGCACATCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGAGCAAAATGTTCCTCATTGATATCATCGCCATCGGCGTGATATCGGTGGCGACGATGTTTGTTTCATCCCCCGTCGAACTGTTGGt                                                   <  1:1710774/140‑1 (MQ=255)

                                                                                  gggCTGTTCGTTGGCACATCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGAGCAAAATGTTCCTCATTGATATCATCGCCATCGGCGTGATATCGGTGGCGACGATGTTTGTTTCATCCCCCGTCGAACTGTTGGt                                                   <  1:1806539/140‑1 (MQ=255)

                                                                                    gCTGTTCGTTGGCACATCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGAGCAAAATGTTCCTCATTGATATCATCGCCATCGGCGTGATATCGGTGGCGACGATGTTTGTTTCATCCCCCGTCGAACTGTTGGTGa                                                 <  2:1334060/140‑1 (MQ=255)

                                                                                     cTGTTCGTTGGCACATCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGAGCAAAATGTTCCTCATTGATATCATCGCCATCGGCGTGATATCGGTGGCGACGATGTTTGTTTCATCCCCCGTCGAACTGTTGGTGAt                                                >  2:1287210/1‑140 (MQ=255)

                                                                                      tGTTCGTTGGCACATCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGAGCAAAATGTTCCTCATTGATATCATCGCCATCGGCGTGATATCGGTGGCGACGATGTTTGTTTCATCCCCCGTCGAACTGTTGGTGATg                                               <  2:167977/140‑1 (MQ=255)

                                                                                       gTTCGTTGGCACATCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGAGCAAAATGTTCCTCATTGATATCATCGCCATCGGCGTGATATCGGTGGCGACGATGTTTGTTTCATCCCCCGTCGAACTGTTGGTGATGc                                              <  1:401318/140‑1 (MQ=255)

                                                                                         tCGTTGGCACATCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGAGCAAAATGTTCCTCATTGATATCATCGCCATCGGCGTGATATCGGTGGCGACGATGTTTGTTTCATCCCCCGTCGAACTGTTGGTGATGCgg                                            <  1:154674/140‑1 (MQ=255)

                                                                                          cGTTGGCACATCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGAGCAAAATGTTCCTCATTGATATCATCGCCATCGGCGTGATATCGGTGGCGACGATGTTTGTTTCATCCCCCGTCGAACTGTTGGTGATGCggg                                           <  1:14401/140‑1 (MQ=255)

                                                                                          cGTTGGCACATCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGAGCAAAATGTTCCTCATTGATATCATCGCCATCGGCGTGATATCGGTGGCGACGATGTTTGTTTCATCCCCCGTCGAACTGTTGGTGATGCggg                                           <  2:713909/140‑1 (MQ=255)

                                                                                          cGTTGGCACATCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGAGCAAAATGTTCCTCATTGATATCATCGCCATCGGCGTGATATCGGTGGCGACGATGTTTGTTTCATCCCCCGTCGAACTGTTGGTGATGCggg                                           <  2:80265/140‑1 (MQ=255)

                                                                                                     cGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGAGCAAAATGTTCCTCATTGATATCATCGCCATCGGCGTGATATCGGTGGCGACGATGTTTGTTTCATCCCCCGTCGAACTGTTGGTGATGCGGGTACTTATCGGc                                >  2:638575/1‑140 (MQ=255)

                                                                                                     cGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGAGCAAAATGTTCCTCATTGATATCATCGCCATCGGCGTGATATCGGTGGCGACGATGTTTGTTTCATCCCCCGTCGAACTGTTGGTGATGCGGGTACTTATCGGc                                <  2:1009226/140‑1 (MQ=255)

                                                                                                     cGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGAGCAAAATGTTCCTCATTGATATCATCGCCATCGGCGTGATATCGGTGGCGACGATGTTTGTTTCATCCCCCGTCGAACTGTTGGTGATGCGGGTACTTATCGGc                                <  1:300128/140‑1 (MQ=255)

                                                                                                     cGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGAGCAAAATGTTCCTCATTGATATCATCGCCATCGGCGTGATATCGGTGGCGACGATGTTTGTTTCATCCCCCGTCGAACTGTTGGTGATGCGGGTACTTATCGGc                                <  1:1970247/140‑1 (MQ=255)

                                                                                                     cGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGAGCAAAATGTTCCTCATTGATATCATCGCCATCGGCGTGATATCGGTGGCGACGATGTTTGTTTCATCCCCCGTCGAACTGTTGGTGATGCGGGTACTTATCGGc                                <  2:2326472/140‑1 (MQ=255)

                                                                                                       cTGTTTGGTTATATTTCCGATAAAGTCGGACGGAGCAAAATGTTCCTCATTGATATCATCGCCATCGGCGTGATATCGGTGGCGACGATGTTTGTTTCATCCCCCGTCGAACTGTTGGTGATGCGGGTACTTATCGGCAt                              >  1:90428/1‑140 (MQ=255)

                                                                                                          tttGGTTATATTTCCGATAAAGTCGGACGGAGCAAAATGTTCCTCATTGATATCATCGCCATCGGCGTGATATCGGTGGCGACGATGTTTGTTTCATCCCCCGTCGAACTGTTGGTGATGCGGGTACTTATCGGCATTGt                           >  2:2493291/1‑140 (MQ=255)

                                                                                                             ggTTATATTTCCGATAAAGTCGGACGGAGCAAAATGTTCCTCATTGATATCATCGCCATCGGCGTGATATCGGTGGCGACGATGTTTGTTTCATCCCCCGTCGAACTGTTGGTGATGCGGGTACTTATCGGCATTGTCAt                        <  2:161531/140‑1 (MQ=255)

                                                                                                             ggTTATATTTCCGATAAAGTCGGACGGAGCAAAATGTTCCTCATTGATATCATCGCCATCGGCGTGATATCGGTGGCGACGATGTTTGTTTCATCCCCCGTCGAACTGTTGGTGATGCGGGTACTTATCGGCATTGTCAt                        <  1:845365/140‑1 (MQ=255)

                                                                                                               ttATATTTCCGATAAAGTCGGACGGAGCAAAATGTTCCTCATTGATATCATCGCCATCGGCGTGATATCGGTGGCGACGATGTTTGTTTCATCCCCCGTCGAACTGTTGGTGATGCGGGTACTTATCGGCATTGTCATCg                      >  1:2619677/1‑140 (MQ=255)

                                                                                                               ttATATTTCCGATAAAGTCGGACGGAGCAAAATGTTCCTCATTGATATCATCGCCATCGGCGTGATATCGGTGGCGACGATGTTTGTTTCATCCCCCGTCGAACTGTTGGTGATGCGGGTACTTATCGGCATTGTCATCg                      >  2:479447/1‑140 (MQ=255)

                                                                                                               ttATATTTCCGATAAAGTCGGACGGAGCAAAATGTTCCTCATTGATATCATCGCCATCGGCGTGATATCGGTGGCGACGATGTTTGTTTCATCCCCCGTCGAACTGTTGGTGATGCGGGTACTTATCGGCATTGTCATCg                      >  1:688878/1‑140 (MQ=255)

                                                                                                               ttATATTTCCGATAAAGTCGGACGGAGCAAAATGTTCCTCATTGATATCATCGCCATCGGCGTGATATCGGTGGCGACGATGTTTGTTTCATCCCCCGTCGAACTGTTGGTGATGCGGGTACTTATCGGCATTGTCATCg                      >  1:115531/1‑140 (MQ=255)

                                                                                                               ttATATTTCCGATAAAGTCGGACGGAGCAAAATGTTCCTCATTGATATCATCGCCATCGGCGTGATATCGGTGGCGACGATGTTTGTTTCATCCCCCGTCGAACTGTTGGTGATGCGGGTACTTATCGGCATTGTCATCg                      >  1:1002083/1‑140 (MQ=255)

                                                                                                               ttATATTTCCGATAAAGTCGGACGGAGCAAAATGTTCCTCATTGATATCATCGCCATCGGCGTGATATCGGTGGCGACGATGTTTGTTTCATCCCCCGTCGAACTGTTGGTGATGCGGGTACTTATCGGCATTGTCATCg                      >  2:1415686/1‑140 (MQ=255)

                                                                                                                 atatTTCCGATAAAGTCGGACGGAACAAAATGTTCCTCATTGATATCATCGCCATCGGCGTGATATCGGTGGCGACGATGTTTGTTTCATCCCCCGTCGAACTGTTGGTGATGCGGGTACTTATCGGCATTGTCATCGGt                    <  2:2082934/140‑1 (MQ=255)

                                                                                                                  tatTTCCGATAAAGTCGGACGGAGCAAAATGTTCCTCATTGATATCATCGCCATCGGCGTGATATCGGTGGCGACGATGTTTGTTTCATCCCCCGTCGAACTGTTGGTGATGCGGGTACTTATCGGCATTGTCATCGGTg                   <  1:1238540/140‑1 (MQ=255)

                                                                                                                  tatTTCCGATAAAGTCGGACGGAGCAAAATGTTCCTCATTGATATCATCGCCATCGGCGTGATATCGGTGGCGACGATGTTTGTTTCATCCCCCGTCGAACTGTTGGTGATGCGGGTACTTATCGGCATTGTCATCGGTg                   <  1:648304/140‑1 (MQ=255)

                                                                                                                  tatTTCCGATAAAGTCGGACGGAGCAAAATGTTCCTCATTGATATCATCGCCATCGGCGTGATATCGGTGGCGACGATGTTTGTTTCATCCCCCGTCGAACTGTTGGTGATGCGGGTACTTATCGGCATTGTCATCGGTg                   <  2:586018/140‑1 (MQ=255)

                                                                                                                  tatTTCCGATAAAGTCGGACGGAGCAAAATGTTCCTCATTGATATCATCGCCATCGGCGTGATATCGGTGGCGACGATGTTTGTTTCATCCCCCGTCGAACTGTTGGTGATGCGGGTACTTATCGGCATTGTCATCGGTg                   <  2:115531/140‑1 (MQ=255)

                                                                                                                  tatTTCCGATAAAGTCGGACGGAGCAAAATGTTCCTCATTGATATCATCGCCATCGGCGTGATATCGGTGGCGACGATGTTTGTTTCATCCCCCGTCGAACTGTTGGTGATGCGGGTACTTATCGGCATTGTCATCGGTg                   <  2:688878/140‑1 (MQ=255)

                                                                                                                    tttCCGATAAAGTCGGACGGAGCAAAATGTTCCTCATTGATATCATCGCCATCGGCGTGATATCGGTGGCGACGATGTTTGTTTCATCCCCCGTCGAACTGTTGGTGATGCGGGTACTTATCGGCATTGTCATCGGTGCa                 <  1:1373331/140‑1 (MQ=255)

                                                                                                                        cGATAAAGTCGGACGGAGCAAAATGTTCCTCATTGATATCATCGCCATCGGCGTGATATCGGTGGCGACGATGTTTGTTTCATCCCCCGTCGAACTGTTGGTGATGCGGGTACTTATCGGCATTGTCATCGGTGCAGAtt             <  1:479447/140‑1 (MQ=255)

                                                                                                                        cGATAAAGTCGGACGGAGCAAAATGTTCCTCATTGATATCATCGCCATCGGCGTGATATCGGTGGCGACGATGTTTGTTTCATCCCCCGTCGAACTGTTGGTGATGCGGGTACTTATCGGCATTGTCATCGGTGCAGAtt             >  2:1801416/1‑140 (MQ=255)

                                                                                                                        cGATAAAGTCGGACGGAGCAAAATGTTCCTCATTGATATCATCGCCATCGGCGTGATATCGGTGGCGACGATGTTTGTTTCATCCCCCGTCGAACTGTTGGTGATGCGGGTACTTATCGGCATTGTCATCGGTGCAGAtt             >  1:2627117/1‑140 (MQ=255)

                                                                                                                          aTAAAGTCGGACGGAGCAAAATGTTCCTCATTGATATCATCGCCATCGGCGTGATATCGGTGGCGACGATGTTTGTTTCATCCCCCGTCGAACTGTTGGTGATGCGGGTACTTATCGGCATTGTCATCGGTGCAGATTAt           >  1:2061483/1‑140 (MQ=255)

                                                                                                                             aaGTCGGACGGAGCAAAATGTTCCTCATTGATATCATCGCCATCGGCGTGATATCGGTGGCGACGATGTTTGTTTCATCCCCCGTCGAACTGTTGGTGATGCGGGTACTTATCGGCATTGTCATCGGTGCAGATTATccc        <  2:679883/140‑1 (MQ=255)

                                                                                                                              aGTCGGACGGAGCAAAATGTTCCTCATTGATATCATCGCCATCGGCGTGATATCGGTGGCGACGATGTTTGTTTCATCCCCCGTCGAACTGTTGGTGATGCGGGTACTTATCGGCATTGTCATCGGTGCAGATTATCCCa       >  1:99112/1‑140 (MQ=255)

                                                                                                                                  ggACGGAGCAAAATGTTCCTCATTGATATCATCGCCATCGGCGTGATATCGGTGGCGACGATGTTTGTTTCATCCCCCGTCGAACTGTTGGTGATGCGGGTACTTATCGGCATTGTCATCGGTGCAGATTATCCCATCGc   <  2:2619677/140‑1 (MQ=255)

                                                                                                                                  ggACGGAGCAAAATGTTCCTCATTGATATCATCGCCATCGGCGTGATATCGGTGGCGACGATGTTTGTTTCATCCCCCGTCGAACTGTTGGTGATGCGGGTACTTATCGGCATTGTCATCGGTGCAGATTATCCCATCGc   <  2:958711/140‑1 (MQ=255)

                                                                                                                                   gACGGAGCAAAATGTTCCTCATTGATATCATCGCCATCGGCGTGATATCGGTGGCGACGATGTTTGTTTCATCCCCCGTCGAACTGTTGGTGATGCGGGTACTTATCGGCATTGTCATCGGTGCAGATTATCCCATCGcc  >  1:1784191/1‑140 (MQ=255)

                                                                                                                                   gACGGAGCAAAATGTTCCTCATTGATATCATCGCCATCGGCGTGATATCGGTGGCGACGATGTTTGTTTCATCCCCCGTCGAACTGTTGGTGATGCGGGTACTTATCGGCATTGTCATCGGTGCAGATTATCCCATCGcc  >  1:1074352/1‑140 (MQ=255)

TGGCGTGGCGCTGGAGCAACTGACGCCGGCGCTGAAACTGGACGCTGACTGGATTGGCTTGCTGGGCGCGGGAACGCTCGCCGGGCTGTTCGTTGGCACATCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGCGCAAAATGTTCCTCATTGATATCATCGCCATCGGCGTGATATCGGTGGCGACGATGTTTGTTTCATCCCCCGTCGAACTGTTGGTGATGCGGGTACTTATCGGCATTGTCATCGGTGCAGATTATCCCATCGCC  >  NC_000913/45917‑46187

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`