BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,801,113	G→T	G50V (GGC→GTC)	nrdI →	dimanganese‑tyrosyl radical cofactor maintenance flavodoxin NrdI

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,801,113	0	G	T	100.0%	394.5 / NA	110	G50V (GGC→GTC)	nrdI	dimanganese‑tyrosyl radical cofactor maintenance flavodoxin NrdI
Reads supporting (aligned to +/- strand): ref base G (0/0); new base T (57/53); total (57/53)

Only 100 of 116 total aligned reads displayed.

TCTACTTCTCCAGCAGCTCCGAAAACACGCAGCGTTTTATCGAACGTTTAGGTCTGCCCGCGGTGCGCATCCCGCTCAATGAGCGGGAACGGATTCAGGTAGACGAGCCTTACATCCTGATCGTGCCCTCTTACGGCGGCGGCGGTACGGCTGGCGCGGTGCCACGACAGGTAATTCGCTTTTTAAACGACGAGCACAACCGGGCGTTGCTTCGCGGCGTTATTGCTTCTGGTAATCGCAACTTTGGTGAGGCGTATGGCCGCGCCGGAGA  >  NC_000913/2800978‑2801248

tCTACTTCTCCAGCAGCTCCGAAAACACGCAGCGTTTTATCGAACGTTTAGGTCTGCCCGCGGTGCGCATCCCGCTCAATGAGCGGGAACGGATTCAGGTAGACGAGCCTTACATCCTGATCGTGCCCTCTTAcgtcggc                                                                                                                                     <  2:37811/140‑1 (MQ=255)

 cTACTTCTCCAGCAGCTCCGAAAACACGCAGCGTTTTATCGAACGTTTAGGTCTGCCCGCGGTGCGCATCCCGCTCAATGAGCGGGAACGGATTCAGGTAGACGAGCCTTACATCCTGATCGTGCCCTCTTAcgtcggcg                                                                                                                                    <  2:1206502/140‑1 (MQ=255)

      tctcCAGCAGCTCCGAAAACACGCAGCGTTTTATCGAACGTTTAGGTCTGCCCGCGGGGCGCATCCCGCTCAATGAGCGGGAACGGATTCAGGTAGACGAGCCTTACATCCTGATCGTGCCCTCTTACGTCGGCGGCGGt                                                                                                                               >  2:1516463/1‑140 (MQ=255)

         ccAGCAGCTCCGAAAACACGCAGCGTTTTATCGAACGTTTAGGTCTGCCCGCGGTGCGCATCCCGCTCAATGAGCGGGAACGGATTCAGGTAGACGAGCCTTACATCCTGATCGTGCCCTCTTACGTCGGCGGCGGTACg                                                                                                                            >  1:592116/1‑140 (MQ=255)

            gcagcTCCGAAAACACGCAGCGTTTTATCGAACGTTTAGGTCTGCCCGCGGTGCGCATCCCGCTCAATGAGCGGGAACGGATTCAGGTAGACGAGCCTTACATCCTGATCGTGCCCTCTTACGTCGGCGGCGGTACGGCt                                                                                                                         >  1:87279/1‑140 (MQ=255)

              agcTCCGAAAACACGCAGCGTTTTATCGAACGTTTAGGTCTGCCCGCGGTGCGCATCCCGCTCAATGAGCGGGAACGGATTCAGGTAGACGAGCCTTACATCCTGATCGTGCCCTCTTACGTCGGCGGCGGTACGGCTgg                                                                                                                       >  1:736877/1‑140 (MQ=255)

               gcTCCGAAAACACGCAGCGTTTTATCGAACGTTTAGGTCTGCCCGCGGTGCGCATCCCGCTCAATGAGCGGGAACGGATTCAGGTAGACGAGCCTTACATCCTGATCGTGCCCTCTTAcgtcggcggcgg                                                                                                                                >  1:2307773/1‑130 (MQ=255)

               gcTCCGAAAACACGCAGCGTTTTATCGAACGTTTAGGTCTGCCCGCGGTGCGCATCCCGCTCAATGAGCGGGAACGGATTCAGGTAGACGAGCCTTACATCCTGATCGTGCCCTCTTAcgtcggcggcgg                                                                                                                                <  2:2307773/130‑1 (MQ=255)

                cTCCGAAAACACGCAGCGTTTTATCGAACGTTTAGGTCTGCCCGCGGTGCGCATCCCGCTCAATGAGCGGGAACGGATTCAGGTAGACGAGCCTTACATCCTGATCGTGCCCTCTTACGTCGGCGGCGGTACGGCTGgcg                                                                                                                     >  2:2021476/1‑140 (MQ=255)

                cTCCGAAAACACGCAGCGTTTTATCGAACGTTTAGGTCTGCCCGCGGTGCGCATCCCGCTCAATGAGCGGGAACGGATTCAGGTAGACGAGCCTTACATCCTGATCGTGCCCTCTTACGTCGGCGGCGGTACGGCTGgcg                                                                                                                     >  1:1829555/1‑140 (MQ=255)

                cTCCGAAAACACGCAGCGTTTTATCGAACGTTTAGGTCTGCCCGCGGTGCGCATCCCGCTCAATGAGCGGGAACGGATTCAGGTAGACGAGCCTTACATCCTGATCGTGCCCTCTTACGTCGGCGGCGGTACGGCTGgcg                                                                                                                     <  2:1390440/140‑1 (MQ=255)

                 tCCGAAAACACGCAGCGTTTTATCGAACGTTTAGGTCTGCCCGCGGTGCGCATCCCGCTCAATGAGCGGGAACGGATTCAGGTAGACGAGCCTTACATCCTGATCGTGCCCTCTTACGTCGGCGGCGGt                                                                                                                               >  1:2416773/1‑129 (MQ=255)

                 tCCGAAAACACGCAGCGTTTTATCGAACGTTTAGGTCTGCCCGCGGTGCGCATCCCGCTCAATGAGCGGGAACGGATTCAGGTAGACGAGCCTTACATCCTGATCGTGCCCTCTTACGTCGGCGGCGGt                                                                                                                               <  2:2416773/129‑1 (MQ=255)

                 tCCGAAAACACGCAGCGTTTTATCGAACGTTTAGGTCTGCCCGCGGTGCGCATCCCGCTCAATGAGCGGGAACGGATTCAGGTAGACGAGCCTTACATCCTGATCGTGCCCTCTTACGTCGGCGGCGGTACGGCTGgcgc                                                                                                                    <  2:2295323/140‑1 (MQ=255)

                  ccGAAAACACGCAGCGTTTTATCGAACGTTTAGGTCTGCCCGCGGTGCGCATCCCGCTCAATGAGCGGGAACGGATTCAGGTAGACGAGCCTTACATCCTGATCGTGCCCTCTTACGTCGGCGGCGGTACGGGTGGcgcg                                                                                                                   <  2:87279/140‑1 (MQ=255)

                  ccGAAAACACGCAGCGTTTTATCGAACGTTTAGGTCTGCCCGCGGTGCGCATCCCGCTCAATGAGCGGGAACGGATTCAGGTAGACGAGCCTTACATCCTGATCGTGCCCTCTTACGTCGGCGGCGGTACGGCTGGcgcg                                                                                                                   >  1:1553088/1‑140 (MQ=255)

                  ccGAAAACACGCAGCGTTTTATCGAACGTTTAGGTCTGCCCGCGGTGCGCATCCCGCTCAATGAGCGGGAACGGATTCAGGTAGACGAGCCTTACATCCTGATCGTGCCCTCTTACGTCGGCGGCGGTACGGCTGGcgcg                                                                                                                   <  1:2140412/140‑1 (MQ=255)

                       aaCACGCAGCGTTTTATCGAACGTTTAGGTCTGCCCGCGGTGCGCATCCCGCTCAATGAGCGGGAACGGATTCAGGTAGACGAGCCTTACATCCTGATCGTGCCCTCTTACGTCGGCGGCGGTACGGCTGGCGCGGTGcc                                                                                                              <  2:1295161/140‑1 (MQ=255)

                        acacGCAGCGTTTTATCGAACGTTTAGGTCTGCCCGCGGTGCGCATCCCGCTCAATGAGCGGGAACGGATTCAGGTAGACGAGCCTTACATCCTGATCGTGCCCTCTTACGTCGGCGGCGGTACGGCTGGCGCGGTGCCa                                                                                                             <  2:113567/140‑1 (MQ=255)

                                          aaCGTTTAGGTCTGCCCGCGGTGCGCATCCCGCTCAATGAGCGGGAACGGATTCAGGTAGACGAGCCTTACATCCTGATCGTGCCCTCTTACGTCGGCGGCGGTACGGCTGGCGCGGTGCCACGACAGGTAATTCGCttt                                                                                           >  1:2507958/1‑140 (MQ=255)

                                          aaCGTTTAGGTCTGCCCGCGGTGCGCATCCCGCTCAATGAGCGGGAACGGATTCAGGTAGACGAGCCTTACATCCTGATCGTGCCCTCTTACGTCGGCGGCGGTACGGCTGGCGCGGTGCCACGACAGGTAATTCGCttt                                                                                           >  1:1422015/1‑140 (MQ=255)

                                                 aGGTCTGCCCGCGGTGCGCATCCCGCTCAATGAGCGGGAACGGATTCAGGTAGACGAGCCTTACATCCTGATCGTGCCCTCTTACGTCGGCGGCGGTACGGCTGGCGCGGTGCTACGACAGGTAATTCGCTTTTTAAacg                                                                                    <  2:559746/140‑1 (MQ=255)

                                                 aGGTCTGCCCGCGGTGCGCATCCCGCTCAATGAGCGGGAACGGATTCAGGTAGACGAGCCTTACATCCTGATCGTGCCCTCTTACGTCGGCGGCGGTACGGCTGGCGCGGTGCCACGACAGGTAATTCGCTTTTTAAacg                                                                                    >  1:1615640/1‑140 (MQ=255)

                                                      tGCCCGCGGTGCGCATCCCGCTCAATGAGCGGGAACGGATTCAGGTAGACGAGCCTTACATCCTGATCGTGCCCTCTTACGTCGGCGGCGGTACGGCTGGCGCGGTGCCACGACAGGTAATTCGCTTTTTAAACGACGAg                                                                               >  1:1835215/1‑140 (MQ=255)

                                                       gCCCGCGGTGCGCATCCCGCTCAATGAGCGGGAACGGATTCAGGTAGACGAGCCTTACATCCTGATCGTGCCCTCTTACGTCGGCGGCGGTACGGCTGGCGCGGTGCCACGACAGGTAATTCGCTTTTTAAacg                                                                                    >  1:1777839/1‑134 (MQ=255)

                                                       gCCCGCGGTGCGCATCCCGCTCAATGAGCGGGAACGGATTCAGGTAGACGAGCCTTACATCCTGATCGTGCCCTCTTACGTCGGCGGCGGTACGGCTGGCGCGGTGCCACGACAGGTAATTCGCTTTTTAAacg                                                                                    <  2:1777839/134‑1 (MQ=255)

                                                       gCCCGCGGTGCGCATCCCGCTCAATGAGCGGGAACGGATTCAGGTAGACGAGCCTTACATCCTGATCGTGCCCTCTTACGTCGGCGGCGGTACGGCTGGCGCGGTGCCACGACAGGTAATTCGCTTTTTAAACGACGAGc                                                                              >  1:2624166/1‑140 (MQ=255)

                                                        cccGCGGTGCGCATCCCGCTCAATGAGCGGGAACGGATTCAGGTAGACGAGCCTTACATCCTGATCGTGCCCTCTTACGTCGGCGGCGGTACGGCTGGCGCGGTGCCACGACAGGTAATTCGCTTTTTAAACGACGAGca                                                                             >  1:1440841/1‑140 (MQ=255)

                                                        cccGCGGTGCGCATCCCGCTCAATGAGCGGGAACGGATTCAGGTAGACGAGCCTTACATCCTGATCGTGCCCTCTTACGTCGGCGGCGGTACGGCTGGCGCGGTGCCACGACAGGTAATTCGCTTTTTAAACGACGAGca                                                                             >  2:2020662/1‑140 (MQ=255)

                                                        cccGCGGTGCGCATCCCGCTCAATGAGCGGGAACGGATTCAGGTAGACGAGCCTTACATCCTGATCGTGCCCTCTTACGTCGGCGGCGGTACGGCTGGCGCGGTGCCACGACAGGTAATTCGCTTTTTAAACGACGAGca                                                                             >  1:2650735/1‑140 (MQ=255)

                                                        cccGCGGTGCGCATCCCGCTCAATGAGCGGGAACGGATTCAGGTAGACGAGCCTTACATCCTGATCGTGCCCTCTTACGTCGGCGGCGGTACGGCTGGCGCGGTGCCACGACAGGCAATTCg                                                                                               <  2:1611523/122‑1 (MQ=255)

                                                        cccGCGGTGCGCATCCCGCTCAATGAGCGGGAACGGATTCAGGTAGACGAGCCTTACATCCTGATCGTGCCCTCTTACGTCGGCGGCGGTACGGCTGGCGCGGTGCCACGACAGGCAATTCg                                                                                               >  1:1611523/1‑122 (MQ=255)

                                                             ggTGCGCAACCCGCTCAATGAGCGGGAACGGATTCAGGTAGACGAGCCTTACATCCTGATCGTGCCCTCTTACGTCGGCGGCGGTACGGCTGGCGCGGTGCCACGACAGGTAATTCGCTTTTTAAACGACGAGCACAAcc                                                                        <  2:1352375/140‑1 (MQ=255)

                                                              gTGCGCATCCCGCTCAATGAGCGGGAACGGATTCAGGTAGACGAGCCTTACATCCTGATCGTGCCCTCTTACGTCGGCGGCGGTACGGCTGGCGCGGTGCCACGACAGGTAATTCGCTTTTTAAACGACGAGCACAACCg                                                                       >  2:910811/1‑140 (MQ=255)

                                                                          cTCAATGAGCGGGAACGGATTCAGGTAGACGAGCCTTACATCCTGATCGTGCCCTCTTACGTCGGCGGCGGTACGGCTGGCGCGGTGCCACGACAGGTAATTCGCTTTTTAAACGACGAGCACAACCGGGCGTTGCTTcg                                                           >  1:2419219/1‑140 (MQ=255)

                                                                          cTCAATGAGCGGGAACGGATTCAGGTAGACGAGCCTTACATCCTGATCGTGCCCTCTTACGTCGGCGGCGGTACGGCTGGCGCGGTGCCACGACAGGTAATTCGCTTTTTAAACGACGAGCACAACCGGGCGTTGCTTcg                                                           <  2:411750/140‑1 (MQ=255)

                                                                          cTCAATGAGCGGGAACGGATTCAGGTAGACGAGCCTTACATCCTGATCGTGCCCTCTTACGTCGGCGGCGGTACGGCTGGCGCGGTGCCACGACAGGTAATTCGCTTTTTAAACGACGAGCACAACCGGGCGTTGCTTcg                                                           <  2:1885174/140‑1 (MQ=255)

                                                                          cTCAATGAGCGGGAACGGATTCAGGTAGACGAGCCTTACATCCTGATCGTGCCCTCTTACGTCGGCGGCGGTACGGCTGGCGCGGTGCCACGACAGGTAATTCGCTTTTTAAACGACGAGCACAACCGGGCGTTGCTTcg                                                           <  1:1516463/140‑1 (MQ=255)

                                                                          cTCAATGAGCGGGAACGGATTCAGGTAGACGAGCCTTACATCCTGATCGTGCCCTCTTACGTCGGCGGCGGTACGGCTGGCGCGGTGCCACGACAGGTAATTCGCTTTTTAAACGACGAGCACAACCGGGCGTTGCTTcg                                                           >  1:1589605/1‑140 (MQ=255)

                                                                           tCAATGAGCGGGAACGGATTCAGGTAGACGAGCCTTACATCCTGATCGTGCCCTCTTACGTCGGCGGCGGTACGGCTGGCGCGGTGCCACGACAGGTAATTCGCTTTTTAAACGACGAGCACAACCGGGCGTTGCTTcgc                                                          <  2:595627/140‑1 (MQ=255)

                                                                           tCAATGAGCGGGAACGGATTCAGGTAGACGAGCCTTACATCCTGATCGTGCCCTCTTACGTCGGCGGCGGTACGGCTGGCGCGGTGCCACGACAGGTAATTCGCTTTTTAAACGACGAGCACAACCGGGCGTTGCTTcgc                                                          >  1:137347/1‑140 (MQ=255)

                                                                           tCAATGAGCGGGAACGGATTCAGGTAGACGAGCCTTACATCCTGATCGTGCCCTCTTACGTCGGCGGCGGTACAGCTGGCGCGGTGCCACGACAGGTAATTCGCTTTTTAAACGACGAGCACAACCGGGCGTTGCTTcgc                                                          >  1:742719/1‑140 (MQ=255)

                                                                            cAATGAGCGGGAACGGATTCAGGTAGACGAGCCTTACATCCTGATCGTGCCCTCTTACGTCGGCGGCGGTACGGCTGGCGCGGTGCCACGACAGGTAATTCGCTTTTTAAACGACGAGCACAACCGGGCGTTGCTTcgcg                                                         <  2:2650735/140‑1 (MQ=255)

                                                                             aaTGAGCGGGAACGGATTCAGGTAGACGAGCCTTACATCCTGATCGTGCCCTCTTACGTCGGCGGCGGTACGGCTGGCGCGGTGCCACGACAGGTAATTCGCTTTTTAAACGACGAGCACAACCGGGCGTTGCTTCgcgg                                                        <  2:1835215/140‑1 (MQ=255)

                                                                             aaTGAGCGGGAACGGATTCAGGTAGACGAGCCTTACATCCTGATCGTGCCCTCTTACGTCGGCGGCGGTACGGCTGGCGCGGTGCCACGACAGGTAATTCGCTTTTTAAACGACGAGCACAACCGGGCGTTGCTTCgcgg                                                        <  2:2507958/140‑1 (MQ=255)

                                                                              aTGAGCGGGAACGGATTCAGGTAGACGAGCCTTACATCCTGATCGTGCCCTCTTACGTCGGCGGCGGTACGGCTGGCGCGGTGCCACGACAGGTAATTCGCTTTTTAAACGACGAGCACAACCGGGCGTTGCTTCgcggc                                                       <  1:910811/140‑1 (MQ=255)

                                                                                  gCGGGAACGGATTCAGGTAGACGAGCCTTACATCCTGATCGTGCCCTCTTACGTCGGCGGCGGTACGGCTGGCGCGGTGCCACGACAGGTAATTCGCTTTTTAAACGACGAGCACAACCGGGCGTTGCTTCGCGGCGTTa                                                   <  2:1829555/140‑1 (MQ=255)

                                                                                  gCGGGAACGGATTCAGGTAGACGAGCCTTACATCCTGATCGTGCCCTCTTACGTCGGCGGCGGTACGGCTGGCGCGGTGCCACGACAGGTAATTCGCTTTTTAAACGACGAGCACAACCGGGCGTTGCTTCGCGGCGTTa                                                   <  2:1568032/140‑1 (MQ=255)

                                                                                   cGGGAACGGATTCAGGTAGACGAGCCTTACATCCTGATCGTGCCCTCTTACGTCGGCGGCGGTACGGCTGGCGTGGTGCCACGACAGGTAATTCGCTTTTTAAACGACGAGCACAACCGGGCGTTGCTTCGCGGCGTTAt                                                  <  2:2613148/140‑1 (MQ=255)

                                                                                   cGGGAACGGATTCAGGTAGACGAGCCTTACATCCTGATCGTGCCCTCTTACGTCGGCGGCGGTACGGCTGGCGCGGTGCCACGACAGGTAATTCGCTTTTTAAACGACGAGCACAACCGGGCGTTGCTTCGCGGCGTTAt                                                  <  2:2419219/140‑1 (MQ=255)

                                                                                   cGGGAACGGATTCAGGTAGACGAGCCTTACATCCTGATCGTGCCCTCTTACGTCGGCGGCGGTACGGCTGGCGCGGTGCCACGACAGGTAATTCGCTTTTTAAACGACGAGCACAACCGGGCGTTGCTTCGCGGCGTTAt                                                  <  2:1422015/140‑1 (MQ=255)

                                                                                   cGGGAACGGATTCAGGTAGACGAGCCTTACATCCTGATCGTGCCCTCTTACGTCGGCGGCGGTACGGCTGGCGCGGTGCCACGACAGGTAATTCGCTTTTTAAACGACGAGCACAACCGGGCGTTGCTTCGCGGCGTTAt                                                  <  2:1572082/140‑1 (MQ=255)

                                                                                   cGGGAACGGATTCAGGTAGACGAGCCTTACATCCTGATCGTGCCCTCTTACGTCGGCGGCGGTACGGCTGGCGCGGTGCCACGACAGGTAATTCGCTTTTTAAACGACGAGCACAACCGGGCGTTGCTTCGCGGCGTTAt                                                  <  2:1589605/140‑1 (MQ=255)

                                                                                       aaCGGATTCAGGTAGACGAGCCTTACATCCTGATCGTGCCCTCTTACGTCGGCGGCGGTACGGCTGGCGCGGTGCCACGACAGGTAATTCGCTTTTTAAACGACGAGCACAACCGGGCGTTGCTTCGCGGCGTTATTGCt                                              >  2:830993/1‑140 (MQ=255)

                                                                                        aCGGATTCAGGTAGACGAGCCTTACATCCTGATCGTGCCCTCTTACGTCGGCGGCGGTACGGCTGGCGCGGTGCCACGACAGGTAATTCGCTTTTTAAACGACGAGCACAACCGGGCGTTGCTTCGCGGCGTTATTGCtt                                             <  2:1615640/140‑1 (MQ=255)

                                                                                         cGGATTCAGGTAGACGAGCCTTACATCCTGATCGTGCCCTCTTACGTCGGCGGCGGTACGGCTGGCGCGGTGCCACGACAGGTAATTCGCTTTTTAAACGACGAGCACAACCGGGCGTTGCTTCGCGGCGTTATTGCTTc                                            >  2:2083364/1‑140 (MQ=255)

                                                                                                aGGTAGACGAGCCTTACATCCTGATCGTGCCCTCTTACGTCGGCGGCGGTACGGCTGGCGCGGTGCCACGACAGGTAATTCGCTTTTTAAACGACGAGCACAACCGGGCGTTGCTTCGCGGCGTTATTGCTTCTGGTAAt                                     >  2:2501756/1‑140 (MQ=255)

                                                                                                  gTAGACGAGCCTTACATCCTGATCGTGCCCTCTTACGTCGGCGGCGGTACGGCTGGCGCGGTGCCACGACAGGTAATTCGCTTTTTAAACGACGAGCACAACCGGGCGTTGCTTCGCGGCGTTATTGCTTCTGGTAATCg                                   >  1:1863111/1‑140 (MQ=255)

                                                                                                   tAGACGAGCCTTACATCCTGATCGTGCCCTCTTACGTCGGCGGCGGTACGGCTGGCGCGGTGCCACGACAGGTAATTCGCTTTTTAAACGACGAGCACAACCGGGCGTTGCTTCGCGGCGTTATTGCTTCTGGTAATCGc                                  <  2:2295387/140‑1 (MQ=255)

                                                                                                     gACGAGCCTTACATCCTGATCGTGCCCTCTTACGTCGGCGGCGGTACGGCTGGCGCGGTGCCACGACAGGTAATTCGCTTTTTAAACGACGAGCACAACCGGGCGTTGCTTCGCGGCGTTATTGCTTCTGGTAATCGCaa                                <  2:387789/140‑1 (MQ=255)

                                                                                                      aCGAGCCTTACATCCTGATCGTGCCCTCTTACGTCGGCGGCGGTACGGCTGGCGCGGTGCCACGACAGGTAATTCGCTTTTTAAACGACGAGCACAACCGGGCGTTGCTTCGCGGCGTTATTGCTTCTGGTAATCGCAAc                               >  1:1467484/1‑140 (MQ=255)

                                                                                                      aCGAGCCTTACATCCTGATCGTGCCCTCTTACGTCGGCGGCGGTACGGCTGGCGCGGTGCCACGACAGGTAATTCGCTTTTTAAACGACGAGCACAACCGGGCGTTGCTTCGCGGCGTTATTGCTTCTGGTAATCGCAAc                               >  2:1750940/1‑140 (MQ=255)

                                                                                                      aCGAGCCTTACATCCTGATCGTGCCCTCTTACGTCGGCGGCGGTACGGCTGGCGCGGTGCCACGACAGGTAATTCGCTTTTTAAACGACGAGCACAACCGGGCGTTGCTTCGCGGCGTTATTGCTTCTGGTAATCGCAAc                               >  2:1761946/1‑140 (MQ=255)

                                                                                                          gCCTTACATCCTGATCGTGCCCTCTTACGTCGGCGGCGGTACGGCTGGCGCGGTGCCACGACAGGTAATTCGCTTTTTAAACGACGAGCACAACCGGGCGTTGCTTCGCGGCGTTATTGCTTCTGGTAATCGCAACTTTg                           >  2:731071/1‑140 (MQ=255)

                                                                                                          gCCTTACATCCTGATCGTGCCCTCTTACGTCGGCGGCGGTACGGCTGGCGCGGTGCCACGACAGGTAATTCGCTTTTTAAACGACGAGCACAACCGGGCGTTGCTTCGCGGCGTTATTGCTTCTGGTAATCGCAACTTTg                           >  1:1212125/1‑140 (MQ=255)

                                                                                                             ttACATCCTGATCGTGCCCTCTTACGTCGGCGGCGGTACGGCTGGCGCGGTGCCACGACAGGTAATTCGCTTTTTAAACGACGAGCACAACCGGGCGTTGCTTCGCGGCGTTATTGCTTCTGGTAATCGCAACTTTGGTg                        <  1:2021476/140‑1 (MQ=255)

                                                                                                             ttACATCCTGATCGTGCCCTCTTACGTCGGCGGCGGTACGGCTGGCGCGGTGCCACGACAGGTAATTCGCTTTTTAAACGACGAGCACAACCGGGCGTTGCTTCGCGGCGTTATTGCTTCTGGTAATCGCAACTTTGGTg                        <  2:1836626/140‑1 (MQ=255)

                                                                                                             ttACATCCTGATCGTGCCCTCTTACGTCGGCGGCGGTACGGCTGGCGCGGTGCCACGACAGGTAATTCGCTTTTTAAACGACGAGCACAACCGGGCGTTGCTTCGCGGCGTTATTGCTTCTGGTAATCGCAACTTTGGTg                        <  1:1692328/140‑1 (MQ=255)

                                                                                                             ttACATCCTGAACGTGCCCTCTTTCGTCGGCGGCGGTACGGCTGGCGCGGTGCCACGACAGGTAATTCGCTTTTTAAACGACGAGCACAACCGGGCGTTGCTTCGCGGCGTTATTGCTTCTGGTAATCGCAACTTTGGTg                        <  2:1110287/140‑1 (MQ=255)

                                                                                                                cATCCTGATCGTGCCCTCTTACGTCGGCGGCGGTACGGCTGGCGCGGTGCCACGACAGGTAATTCGCTTTTTAAACGACGAGCACAACCGGGCGTTGCTTCGCGGCGTTATTGCTTCTGGTAATCGCAACTTTGGTGAgg                     >  1:1341902/1‑140 (MQ=255)

                                                                                                                       aTCGTGCCCTCTTACGTCGGCGGCGGTACGGCTGGCGCGGTGCCACGACAGGTAATTCGCTTTTTAAACGACGAGCACAACCGGGCGTTGCTTCGCGGCGTTATTGCTTCTGGTAATCGCAACTTTGGTg                        <  2:1881932/130‑1 (MQ=255)

                                                                                                                       aTCGTGCCCTCTTACGTCGGCGGCGGTACGGCTGGCGCGGTGCCACGACAGGTAATTCGCTTTTTAAACGACGAGCACAACCGGGCGTTGCTTCGCGGCGTTATTGCTTCTGGTAATCGCAACTTTGGTg                        >  1:1881932/1‑130 (MQ=255)

                                                                                                                       aTCGTGCCCTCTTACGTCGGCGGCGGTACGGCTGGCGCGGTGCCACGACAGGTAATTCGCTTTTTAAACGACGAGCACAACCGGGCGTTGCTTCGCGGCGTTATTGCTTCTGGTAATCGCAACTTTGGTGAGGCGTATgg              >  2:286423/1‑140 (MQ=255)

                                                                                                                       aTCGTGCCCTCTTACGTCGGCGGCGGTACGGCTGGCGCGGTGCCACGACAGGTAATTCGCTTTTTAAACGACGAGCACAACCGGGCGTTGCTTCGCGGCGTTATTGCTTCTGGTAATCGCAACTTTGGTGAGGCGTATgg              >  1:339030/1‑140 (MQ=255)

                                                                                                                          gTGCCCTCTTACGTCGGCGGCGGTACGGCTGGCGCGGTGCCACGACAGGTAATTCGCTTTTTAAACGACGAGCACAACCGGGCGTTGCTTCGCGGCGTTATTGCTTCTGGTAATCGCAACTTTGGTGAGGCGTATGGCcg           >  1:1657224/1‑140 (MQ=255)

                                                                                                                          gTGCCCTCTTACGTCGGCGGCGGTACGGCTGGCGCGGTGCCACGACAGGTAATTCGCTTTTTAAACGACGAGCACAACCGGGCGTTGCTTCGCGGCGTTATTGCTTCTGGTAATCGCAACTTTGGTGAGGCGTATGGCcg           <  2:2263896/140‑1 (MQ=255)

                                                                                                                          gTGCCCTCTTACGTCGGCGGCGGTACGGCTGGCGCGGTGCCACGACAGGTAATTCGCTTTTTAAACGACGAGCACAACCGGGCGTTGCTTCGCGGCGTTATTGCTTCTGGTAATCGCAACTTTGGTGAGGCGTATGGCcg           <  2:1467484/140‑1 (MQ=255)

                                                                                                                          gTGCCCTCTTACGTCGGCGGCGGTACGGCTGGCGCGGTGCCACGACAGGTAATTCGCTTTTTAAACGACGAGCACAACCGGGCGTTGCTTCGCGGCGTTATTGCTTCTGGTAATCGCAACTTTGGTGAGGCGTATGGCcg           >  1:1709897/1‑140 (MQ=255)

                                                                                                                          gTGCCCTCTTACGTCGGCGGCGGTACGGCTGGCGCGGTGCCACGACAGGTAATTCGCTTTTTAAACGACGAGCACAACCGGGCGTTGCTTCGCGGCGTTATTGCTTCTGGTAATCGCAACTTTGGTGAGGCGTATGGCcg           <  1:1761946/140‑1 (MQ=255)

                                                                                                                           tGCCCTCTTACGTCGGCGGCGGTACGGCTGGCGCGGTGCCATGACAGGTAATTCGCTTTTTAAACGACGAGCACAACCGGGCGTTGCTTCGCGGCGTTATTGCTTCTGGTAATCGCAACTTTGGTGAGGCGTATGGCcgc          >  1:1388628/1‑140 (MQ=255)

                                                                                                                           tGCCCTCTTACGTCGGCGGCGGTACGGCTGGCGCGGTGCCACGACAGGTAATTCGCTTTTTAAACGACGAGCACAACCGGGCGTTGCTTCGCGGCGTTATTGCTTCTGGTAATCGCAACTTTGGTg                        <  1:2217059/126‑1 (MQ=255)

                                                                                                                           tGCCCTCTTACGTCGGCGGCGGTACGGCTGGCGCGGTGCCACGACAGGTAATTCGCTTTTTAAACGACGAGCACAACCGGGCGTTGCTTCGCGGCGTTATTGCTTCTGGTAATCGCAACTTTGGTGAGGCGTATGGCcgc          >  1:1360322/1‑140 (MQ=255)

                                                                                                                           tGCCCTCTTACGTCGGCGGCGGTACGGCTGGCGCGGTGCCACGACAGGTAATTCGCTTTTTAAACGACGAGCACAACCGGGCGTTGCTTCGCGGCGTTATTGCTTCTGGTAATCGCAACTTTGGTGAGGCGTATGGCcgc          >  2:2635789/1‑140 (MQ=255)

                                                                                                                           tGCCCTCTTACGTCGGCGGCGGTACGGCTGGCGCGGTGCCACGACAGGTAATTCGCTTTTTAAACGACGAGCACAACCGGGCGTTGCTTCGCGGCGTTATTGCTTCTGGTAATCGCAACTTTGGTGAGGCGTATGGCcgc          >  1:99743/1‑140 (MQ=255)

                                                                                                                           tGCCCTCTTACGTCGGCGGCGGTACGGCTGGCGCGGTGCCACGACAGGTAATTCGCTTTTTAAACGACGAGCACAACCGGGCGTTGCTTCGCGGCGTTATTGCTTCTGGTAATCGCAACTTTGGTGAGGCGTATGGCcgc          >  1:37200/1‑140 (MQ=255)

                                                                                                                           tGCCCTCTTACGTCGGCGGCGGTACGGCTGGCGCGGTGCCACGACAGGTAATTCGCTTTTTAAACGACGAGCACAACCGGGCGTTGCTTCGCGGCGTTATTGCTTCTGGTAATCGCAACTTTGGTGAGGCGTATGGCcgc          >  1:1046141/1‑140 (MQ=255)

                                                                                                                            gCCCTCTTACGTCGGCGGCGGTACGGCTGGCGCGGTGCCACGACAGGTAATTCGCTTTTTAAACGACGAGCACAACCGGGCGTTGCTTCGCGGCGTTATTGCTTCTGGTAATCGCAACTTTGGTGAGGCGTATGGCcgcg         <  2:625108/140‑1 (MQ=255)

                                                                                                                            gCCCTCTTACGTCGGCGGCGGTACGGCTGGCGCGGTGCCACGACAGGTAATTCGCTTTTTAAACGACGAGCACAACCGGGCGTTGCTTCGCGGCGTTATTGCTTCTGGTAATCGCAACTTTGGTGAGGCGTATGGCcgcg         <  2:355274/140‑1 (MQ=255)

                                                                                                                            gCCCTCTTACGTCGGCGGCGGTACGGCTGGCGCGGTGCCACGACAGGTAATTCGCTTTTTAAACGACGAGCACAACCGGGCGTTGCTTCGCGGCGTTATTGCTTCTGGTAATCGCAACTTTGGTGAGGCGCATGGCcgcg         >  1:887921/1‑140 (MQ=255)

                                                                                                                             cccTCTTACGTCGGCGGCGGTACGGCTGGCGCGGTGCCACGACAGGTAATTCGCTTTTTAAACGACGAGCACAACCGGGCGTTGCTTCGCGGCGTTATTGCTTCTGGTAATCGCAACTTTGGTGAGGCGTATGGCCgcgc        >  1:1022396/1‑140 (MQ=255)

                                                                                                                             cccTCTTACGTCGGCGGCGGTACGGCTGGCGCGGTGCCACGACAGGTAATTCGCTTTTTAAACGACGAGCACAACCGGGCGTTGCTTCGCGGCGTTATTGCTTCTGGTAATCGCAACTTTGGTGAGGCGTATGGCCgcgc        >  2:108757/1‑140 (MQ=255)

                                                                                                                             cccTCTTACGTCGGCGGCGGTACGGCTGGCGCGGTGCCACGACAGGTAATTCGCTTTTTAAACGACGAGCACAACCGGGCGTTGCTTCGCGGCGTTATTGCTTCTGGTAATCGCAACTTTGGTGAGGCGTATGGCCgcgc        <  1:2083364/140‑1 (MQ=255)

                                                                                                                             cccTCTTACGTCGGCGGCGGTACGGCTGGCGCGGTGCCACGACAGGTAATTCGCTTTTTAAACGACGAGCACAACCGGGCGTTGCTTCGCGGCGTTATTGCTTCTGGTAATCGCAACTTTGGTGAGGCGTATGGCCgcgc        >  2:200339/1‑140 (MQ=255)

                                                                                                                              ccTCTTACGTCGGCGGCGGTACGGCTGGCGCGGTGCCACGACAGGTAATTCGCTTTTTAAACGACGAGCACAACCGGGCGTTGCTTCGCGGCGTTATTGCTTCTGGTAATCGCAACTTTGGTGAGGCGTATGGCCGCGcc       <  2:41774/140‑1 (MQ=255)

                                                                                                                              ccTCTTACGTCGGCGGCGGTACGGCTGGCGCGGTGCCACGACAGGTAATTCGCTTTTTAAACGACGAGCACAACCGGGCGTTGCTTCGCGGCGTTATTGCTTCTGGTAATCGCAACTTTGGTGAGGCGTATGGCCGCGcc       <  2:2427543/140‑1 (MQ=255)

                                                                                                                              ccTCTTACGTCGGCGGCGGTACGGCTGGCGCGGTGCCACGACAGGTAATTCGCTTTTTAAACGACGAGCACAACCGGGCGTTGCTTCGCGGCGTTATTGCTTCTGGTAATCGCAACTTTGGTGAGGCGTATGGCCGCGcc       <  1:2544075/140‑1 (MQ=255)

                                                                                                                              ccTCTTACGTCGGCGGCGGTACGGCTGGCGCGGTGCCACGACAGGTAATTCGCTTTTTAAACGACGAGCACAACCGGGCGTTGCTTCGCGGCGTTATTGCTTCTGGTAATCGCAACTTTGGTGAGGCGTATGGCCGCGcc       <  2:1709897/140‑1 (MQ=255)

                                                                                                                                 ctTACGTCGGCGGCGGTACGGCTGGCGCGGTGCCACGACAGGTAATTCGCTTTTTAAACGACGAGCACAACCGGGCGTTGCTTCGCGGCGTTATTGCTTCTGGTAATCGCAACTTTGGTGAGGCGTATGGCCGCGcc       >  1:1468856/1‑137 (MQ=255)

                                                                                                                                 ctTACGTCGGCGGCGGTACGGCTGGCGCGGTGCCACGACAGGTAATTCGCTTTTTAAACGACGAGCACAACCGGGCGTTGCTTCGCGGCGTTATTGCTTCTGGTAATCGCAACTTTGGTGAGGCGTATGGCCGCGcc       <  2:1468856/137‑1 (MQ=255)

                                                                                                                                   tACGTCGGCGGCGGTACGGCTGGCGCGGTGCCACGACAGGTAATTCGCTTTTTAAACGACGAGCACAACCGGGCGTTGCTTCGCGGCGTTATTGCTTCTGGTAATCGCAACTTTGGTGAGGCGTATGGCCGCGCCGgaga  <  2:1022396/140‑1 (MQ=255)

TCTACTTCTCCAGCAGCTCCGAAAACACGCAGCGTTTTATCGAACGTTTAGGTCTGCCCGCGGTGCGCATCCCGCTCAATGAGCGGGAACGGATTCAGGTAGACGAGCCTTACATCCTGATCGTGCCCTCTTACGGCGGCGGCGGTACGGCTGGCGCGGTGCCACGACAGGTAATTCGCTTTTTAAACGACGAGCACAACCGGGCGTTGCTTCGCGGCGTTATTGCTTCTGGTAATCGCAACTTTGGTGAGGCGTATGGCCGCGCCGGAGA  >  NC_000913/2800978‑2801248

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`