BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,883,764	C→A	T125T (ACG→ACT)	casA ←	type I‑E CRISPR system Cascade subunit CasA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,883,764	0	C	A	100.0%	694.8 / NA	191	T125T (ACG→ACT)	casA	type I‑E CRISPR system Cascade subunit CasA
Reads supporting (aligned to +/- strand): ref base C (0/0); new base A (85/106); total (85/106)

Only 100 of 197 total aligned reads displayed.

GTGTTCCTCCACGTAAACCGCTTTTAAAACCACCACCAAAACCTGGTGCCTGATTCGCCTGGTTGAATAACGCAATCGCAGTGCATCCACCACATAATGCTTCACCCTGCCCCGGTTGATTGACAAATGCACAATTCGTCGCGCCGCTTACCCCAGCCAACAGTTTTTCCATTGGAGTCACATCATTTGCTTTGACACCTTTGGTCTGCATAAAGGGATGTTCTGCGTGATTAAGGTAGAACATATCTATCCACGGCGCGATGAGTTGTTGA  >  NC_000913/2883628‑2883899

gtgtTCCTCCACGTAAACCGCTTTTAAAACCACCACCAAAACCTGGTGCCTGATTCGCCTGGTTGAATAACGCAATCGCAGTGCATCCACCACATAATGCTTCACCCTGCCCCGGTTGATTGACAAATGCACAATtagtc                                                                                                                                      >  2:719024/1‑140 (MQ=255)

 tgtTCCTCCACGTAAACCGCTTTTAAAACCACCACCAAAACCTGGTGCCTGATTCGCCTGGTTGAATAACGCAATCGCAGTGCATCCACCACATAATGCTTCACCCTGCCCCGGTTGATTGACAAATGCACAATtagtcg                                                                                                                                     <  2:1726275/140‑1 (MQ=255)

  gtTCCTCCACGTAAACCGCTTTTAAAACCACCACCAAAACCTGGTGCCTGATTCGCCTGGTTGAATAACGCAATCGCAGTGCATCCACCACATAATGCTTCACCCTGCCCCGGTTGATTGACAAATGCACAATTAGTcgc                                                                                                                                    >  1:2101527/1‑140 (MQ=255)

  gtTCCTCCACGTAAACCGCTTTTAAAACCACCACCAAAACCTGGTGCCTGATTCGCCTGGTTGAATAACGCAATCGCAGTGCATCCACCACATAATGCTTCACCCTGCCCCGGTTGATTGACAAATGCACAATTAGTcgc                                                                                                                                    >  2:2305189/1‑140 (MQ=255)

   ttCCTCCACGTAAACCGCTTTTAAAACCACCACCAAAACCTGGTGCCTGATTCGCCTGGTTGAATAACGCAATCGCAGTGCATCCACCACATAATGCTTCACCCTGCCCCGGTTGATTGACAAATGCACAATTAGTcgcg                                                                                                                                   <  1:548644/140‑1 (MQ=255)

    tcctccACGTAAACCGCTTTTAAAACCACCACCAAAACCTGGTGCCTGATTCGCCTGGTTGAATAACGCAATCGCAGTGCATCCACCACATAATGCTTCACCCTGCCCCGGTTGATTGACAAATGCACAATTAGTCgcgc                                                                                                                                  >  1:75477/1‑140 (MQ=255)

    tcctccACGTAAACCGCTTTTAAAACCACCACCAAAACCTGGTGCCTGATTCGCCTGGTTGAATAACGCAATCGCAGTGCATCCACCACATAATGCTTCACCCTGCCCCGGTTGATTGACAAATGCACAATTAGTCgcgc                                                                                                                                  >  1:2313051/1‑140 (MQ=255)

    tcctccACGTAAACCGCTTTTAAAACCACCACCAAAACCTGGTGCCTGATTCGCCTGGTTGAATAACGCAATCGCAGTGCATCCACCACATAATGCTTCACCCTGCCCCGGTTGATTGACAAATGCACAATTAGTCgcgc                                                                                                                                  >  2:626219/1‑140 (MQ=255)

    tcctccACGTAAACCGCTTTTAAAACCACCACCAAAACCTGGTGCCTGATTCGCCTGGTTGAATAACGCAATCGCAGTGCATCCACCACATAATGCTTCACCCTGCCCCGGTTGATTGACAAATGCACAATTAGTCgcgc                                                                                                                                  >  1:1519772/1‑140 (MQ=255)

    tcctccACGTAAACCGCTTTTAAAACCACCACCAAAACCTGGGGCCTGATTCGCCTGGTTGAATAACGCAATCGCAGTGCATCCACCACATAATGCTTCACCCTGCCCCGGTTGATTGACAAATGCACAATTAGTCgcgc                                                                                                                                  >  2:1045425/1‑140 (MQ=255)

       tccACGTAAACCGCTTTTAAAACCACCACCAAAACCTGGTGCCTGATTCGCCTGGTTGAATAACGCAATCGCAGTGCATCCACCACATAATGCTTCACCCTGCCCCGGTTGATTGACAAATGCACAATTAGTCGcgccgc                                                                                                                               >  1:1662094/1‑140 (MQ=255)

        ccACGTAAACCGCTTTTAAAACCACCACCAAAACCTGGTGCCTGATTCGCCTGGTTGAATAACGCAATCGCAGTGCATCCACCACATAATGCTTCACCCTGCCCCGGTTGATTGACAAATGCACAATTAGTCGCGCCGCt                                                                                                                              <  2:986297/140‑1 (MQ=255)

           cGTAAACCGCTTTTAAAACCACCACCAAAACCTGGTGCCTGATTCGCCTGGTTGAATAACGCAATCGCAGTGCATCCACCACATAATGCTTCACCCTGCCCCGGTTGATTGACAAATGCACAATTAGTCGCGCCGCTTAc                                                                                                                           >  1:230173/1‑140 (MQ=255)

             tAAACCGCTTTTAAAACCACCACCAAAACCTGGTGCCTGATTCGCCTGGTTGAATAACGCAATCGCAGTGCATCCACCACATAATGCTTCACCCTGCCCCGGTTGATTGACAAATGCACAATTAGTCGCGCCGCTTAccc                                                                                                                         >  2:1997477/1‑140 (MQ=255)

                    cTTTTAAAACCACCACCAAAACCTGGTGCCTGATTCGCCTGGTTGAATAACGCAATCGCAGTGCATCCACCACATAATGCTTCACCCTGCCCCGGTTGATTGACAAATGCACAATTAGTCGCGCCGCTTACCCCAGCCaa                                                                                                                  <  1:1573536/140‑1 (MQ=255)

                     ttttAAAACCACCACCAAAACCTGGTGCCTGATTCGCCTGGTTGAATAACGCAATCGCAGTGCATCCACCACATAATGCTTCACCCTGCCCCGGTTGATTGACAAATGCACAATTAGTCGCGCCGCTTACCCCAGCCAAc                                                                                                                 >  1:2399569/1‑140 (MQ=255)

                     ttttAAAACCACCACCAAAACCTGGTGCCTGATTCGCCTGGTTGAATAACGCAATCGCAGTGCATCCACCACATAATGCTTCACCCTGCCCCGGTTGATTGACAAATGCACAATTAGTCGCGCCGCTTACCCCAGCCAAc                                                                                                                 >  2:547700/1‑140 (MQ=255)

                               accaccaAAACCTGGTGCCTGATTCGCCTGGTTGAATAACGCAATCGCAGTGCATCCACCACATAATGCTTCACCCTGCCCCGGTTGATTGACAAATGCACAATTAGTCGCGCCGCTTACCCCAGCCAACAGTTTTTCCa                                                                                                       <  2:1672794/140‑1 (MQ=255)

                                ccaccaAAACCTGGTGCCTGATTCGCCTGGTTGAATAACGCAATCGCAGTGCATCCACCACATAATGCTTCACCCTGCCCCGGTTGATTGACAAATGCACAATTAGTCGCGCCGCTTACCCCAGCCAACAGTTTTTCCAt                                                                                                      <  2:2604549/140‑1 (MQ=255)

                                ccaccaAAACCTGGTGCCTGATTCGCCTGGTTGAATAACGCAATCGCAGTGCATCCACCACATAATGCTTCACCCTGCCCCGGTTGATTGACAAATGCACAATTAGTCGCGCCGCTTACCCCAGCCAACAGTTTTTCCAt                                                                                                      >  1:626638/1‑140 (MQ=255)

                                   ccaAAACCTGGTGCCTGATTCGCCTGGTTGAATAACGCAATCGCAGTGCATCCACCACATAATGCTTCACCCTGCCCCGGTTGATTGACAAATGCACAATTAGTCGCGCCGCTTACCCCAGCCAACAGTTTTTCCATTgg                                                                                                   >  1:676237/1‑140 (MQ=255)

                                      aaaCCTGGTGCCTGATTCGCCTGGTTGAATAACGCAATCGCAGTGCATCCACCACATAATGCTTCACCCTGCCCCGGTTGATTGACAAATGCACAATTAGTCGCGCCGCTTACCCCAGCCAACAGTTTTTCCATTGGAGt                                                                                                <  2:1479894/140‑1 (MQ=255)

                                       aaCCTGGTGCCTGATTCGCCTGGTTGAATAACGCAATCGCAGTGCATCCACCACATAATGCTTCACCCTGCCCCGGTTGATTGACAAATGCACAATTAGTCGCGCCGCTTACCCCAGCCAACAGTTTTTCCATTGGa                                                                                                  <  1:2595586/137‑1 (MQ=255)

                                       aaCCTGGTGCCTGATTCGCCTGGTTGAATAACGCAATCGCAGTGCATCCACCACATAATGCTTCACCCTGCCCCGGTTGATTGACAAATGCACAATTAGTCGCGCCGCTTACCCCAGCCAACAGTTTTTCCATTGGAGTc                                                                                               <  2:406834/140‑1 (MQ=255)

                                        aCCTGGTGCCTGATTCGCCTGGTTGAATAACGCAATCGCAGTGCATCCACCACATAATGCTTCACCCTGCCCCGGTTGATTGACAAATGCACAATTAGTCGCGCCGCTTACCCCAGCCAACAGTTTTTCCATTGGAGTca                                                                                              >  1:2277846/1‑140 (MQ=255)

                                            ggTGCCTGATTCGCCTGGTTGAATAACGCAATCGCAGTGCATCCACCACATAATGCTTCACCCTGCCCCGGTTGATTGACAAATGCACAATTAGTCGCGCCGCTTACCCCAGCCAACAGTTTTTCCATTGGAGTCAcatc                                                                                          >  1:326001/1‑140 (MQ=255)

                                              tGCCTGATTCGCCTGGTTGAATAACGCAATCGCAGTGCATCCACCACATAATGCTTCACCCTGCCCCGGTTGATTGACAAATGCACAATTAGTCGCGCCGCTTACCCCAGCCAACAGTTTTTCCATTGGAGTCAcatcat                                                                                        <  2:766944/140‑1 (MQ=255)

                                              tGCCTGATTCGCCTGGTTGAATAACGCAATCGCAGTGCATCCACCACATAATGCTTCACCCTGCCCCGGTTGATTGACAAATGCACAATTAGTCGCGCCGCTTACCCCAGCCAACAGTTTTTCCATTGGAGTCAcatcat                                                                                        >  2:95841/1‑140 (MQ=255)

                                              tGCCTGATTCGCCTGGTTGAATAACGCAATCGCAGTGCATCCACCACATAATGCTTCACCCTGCCCCGGTTGATTGACAAATGCACAATTAGTCGCGCCGCTTACCCCAGCCAACAGTTTTTCCATTGGAGTCAcatcat                                                                                        >  2:1272617/1‑140 (MQ=255)

                                               gCCTGATTCGCCTGGTTGAATAACGCAATCGCAGTGCATCCACCACATAATGCTTCACCCTGCCCCGGTTGATTGACAAATGCACAATTAGTCGCGCCGCTTACCCCAGCCAACAGTTTTTCCATTGGAGTCACATCAtt                                                                                       <  1:1272617/140‑1 (MQ=255)

                                               gCCTGATTCGCCTGGTTGAATAACGCAATCGCAGTGCATCCACCACATAATGCTTCACCCTGCCCCGGTTGATTGACAAATGCACAATTAGTCGCGCCGCTTACCCCAGCCAACAGTTTTTCCATTGGAGTCACATCAtt                                                                                       >  2:274074/1‑140 (MQ=255)

                                                ccTGATTCGCCTGGTTGAATAACGCAATCGCAGTGCATCCACCACATAATGCTTCACCCTGCCCCGGTTGATTGACAAATGCACAATTAGTCGCGCCGCTTACCCCAGCCAACAGTTTTTCCATTGGAGTCACATCAttt                                                                                      <  2:1920708/140‑1 (MQ=255)

                                                 cTGATTCGCCTGGTTGAATAACGCAATCGCAGTGCATCCACCACATAATGCTTCACCCTGCCCCGGTTGATTGACAAATGCACAATTAGTCGCGCCGCTTACCCCAGCCAACAGTTTTTCCATTGGAGTc                                                                                               >  2:376971/1‑130 (MQ=255)

                                                    aTTCGCCTGGTTGAATAACGCAATCGCAGTGCATCCACCACATAATGCTTCACCCTGCCCCGGTTGATTGACAAATGCACAATTAGTCGCGCCGCTTACCCCAGCCAACAGTTTTTCCATTGGAGTCACATCATTTGCtt                                                                                  >  1:85326/1‑140 (MQ=255)

                                                     ttCGCCTGGTTGAATAACGCAATCGCAGTGCATCCACCACATAATGCTTCACCCTGCCCCGGTTGATTGACAAATGCACAATTAGTCGCGCCGCTTACCCCAGCCAACAGTTTTTCCATTGGAGTCACATCATTTGCttt                                                                                 <  2:2246788/140‑1 (MQ=255)

                                                       cGCCTGGTTGAATAACGCAATCGCAGTGCATCCTCCACATAATGCTTCACCCTGCCCCGGTTGATTGACAAATGCACAATTAGTCGCGCCGCTTACCCCAGCCAACAGTTTTTCCATTGGAGTCACATCATTTGCTTTGa                                                                               <  2:675953/140‑1 (MQ=255)

                                                       cGCCTGGTTGAATAACGCAATCGCAGTGCATCCACCACATAATGCTTCACCCTGCCCCGGTTGATTGACAAATGCACAATTAGTCGCGCCGCTTACCCCAGCCAACAGTTTTTCCATTGGAGTCACATCATTTGCTTTGa                                                                               <  1:1349342/140‑1 (MQ=255)

                                                       cGCCTGGTTGAATAACGCAATCGCAGTGCATCCACCACATAATGCTTCACCCTGCCCCGGTTGATTGACAAATGCACAATTAGTCGCGCCGCTTACCCCAGCCAACAGTTTTTCCATTGGAGTCACATCATTTGCTTTGa                                                                               <  2:1652348/140‑1 (MQ=255)

                                                       cGCCTGGTTGAATAACGCAATCGCAGTGCATCCACCACATAATGCTTCACCCTGCCCCGGTTGATTGACAAATGCACAATTAGTCGCGCCGCTTACCCCAGCCAACAGTTTTTCCATTGGAGTCACATCATTTGCTTTGa                                                                               <  2:309055/140‑1 (MQ=255)

                                                              ttGAATAACGCAATCGCAGTGCATCCACCACATAATGCTTCACCCTGCCCCGGTTGATTGACAAATGCACAATTAGTCGCGCCGCTTACCCCAGCCAACAGTTTTTCCATTGGAGTCACATCATTTGCTTTGACACCttt                                                                        <  2:230121/140‑1 (MQ=255)

                                                                 aaTAACGCAATCGCAGTGCATCCACCACATAATGCTTCACCCTGCCCCGGTTGATTGACAAATGCACAATTAGTCGCGCCGCTTACCCCAGCCAACAGTTTTTCCATTGGAGTCACATCATTTGCTTTGACACCTTTGGt                                                                     <  2:1991122/140‑1 (MQ=255)

                                                                 aaTAACGCAATCGCAGTGCATCCACCACATAATGCTTCACCCTGCCCCGGTTGATTGACAAATGCACAATTAGTCGCGCCGCTTACCCCAGCCAACAGTTTTTCCATTGGAGTCACATCATTTGCTTTGACACCTTTGGt                                                                     <  1:2125053/140‑1 (MQ=255)

                                                                 aaTAACGCAATCGCAGTGCATCCACCACATAATGCTTCACCCTGCCCCGGTTGATTGACAAATGCACAATTAGTCGCGCCGCTTACCCCAGCCAACAGTTTTTCCATTGGAGTCACATCATTTGCTTTGACACCTTTGGt                                                                     <  1:1997477/140‑1 (MQ=255)

                                                                  aTAACGCAATCGCAGTGCATCCACCACATAATGCTTCACCCTGCCCCGGTTGATTGACAAATGCACAATTAGTCGCGCCGCTTACCCCAGCCAACAGTTTTTCCATTGGAGTCACATCATTTGCTTTGACACCTTTGGTc                                                                    <  2:1406153/140‑1 (MQ=255)

                                                                   tAACGCAATCGCAGTGCATCCACCACATAATGCTTCACCCTGCCCCGGTTGATTGACAAATGCACAATTAGTCGCGCCGCTTACCCCAGCCAACAGTTTTTCCATTGGAGTCACATCATTTGCTTTGACACCTTTGGTCt                                                                   <  1:716712/140‑1 (MQ=255)

                                                                     aCGCAATCGCAGTGCATCCACCACATAATGCTTCACCCTGCCCCGGTTGATTGACAAATGCACAATTAGTCGCGCCGCTTACCCCAGCCAACAGTTTTTCCATTGGAGTCACATCATTTGCTTTGACACCTTTGGTCTGc                                                                 <  2:1555171/140‑1 (MQ=255)

                                                                       gCAATCGCAGTGCATCCACCACATAATGCTTCACCCTGCCCCGGTTGATTGACAAATGCACAATTAGTCGCTCCGCTTACCCCAGCCAACAGTTTTTCCATTGGAGTCACATCATTTGCTTTGACACCTTTGGTCTGCAt                                                               >  2:48874/1‑140 (MQ=255)

                                                                       gCAATCGCAGTGCATCCACCACATAATGCTTCACCCTGCCCCGGTTGATTGACAAATGCACAATTAGTCGCGCCGCTTACCCCAGCCAACAGTTTTTCCATTGGAGTCACATCATTTGCTTTGACACCTTTGGTCTGCa                                                                <  2:1104118/139‑1 (MQ=255)

                                                                       gCAATCGCAGTGCATCCACCACATAATGCTTCACCCTGCCCCGGTTGATTGACAAATGCACAATTAGTCGCGCCGCTTACCCCAGCCAACAGTTTTTCCATTGGAGTCACATCATTTGCTTTGACACCTTTGGTCTGCAt                                                               >  2:1862812/1‑140 (MQ=255)

                                                                       gCAATCGCAGTGCATCCACCACATAATGCTTCACCCTGCCCCGGTTGATTGACAAATGCACAATTAGTCGCGCCGCTTACCCCAGCCAACAGTTTTTCCATTGGAGTCACATCATTTGCTTTGACACCTTTGGTCTGCAt                                                               >  2:1190292/1‑140 (MQ=255)

                                                                       gCAATCGCAGTGCATCCACCACATAATGCTTCACCCTGCCCCGGTTGATTGACAAATGCACAATTAGTCGCGCCGCTTACCCCAGCCAACAGTTTTTCCATTGGAGTCACATCATTTGCTTTGACACCTTTGGTCTGCAt                                                               >  1:1876150/1‑140 (MQ=255)

                                                                        cAATCGCAGTGCATCCACCACATAATGCTTCACCCTGCCCCGGTTGATTGACAAATGCACAATTAGTCGCGCCGCTTACCCCAGCCAACAGTTTTTCCATTGGAGTCACATCATTTGCTTTGACACCTTTGGTCTGCATa                                                              <  2:2244529/140‑1 (MQ=255)

                                                                        cAATCGCAGTGCATCCACCACATAATGCTTCACCCTGCCCCGGTTGATTGACAAATGCACAATTAGTCGCGCCGCTTACCCCAGCCAACAGTTTTTCCATTGGAGTCACATCATTTGCTTTGACACCTTTGGTCTGCATa                                                              <  2:577485/140‑1 (MQ=255)

                                                                                     tCCACCACATAATGCTTCACCCTGCCCCGGTTGATTGACAAATGCACAATTAGTCGCGCCGCTTACCCCAGCCAACAGTTTTTCCATTGGAGTCACATCATTTGCTTTGACACCTTTGGTCTGCATAAAGGGATGTTCTg                                                 >  2:1060902/1‑140 (MQ=255)

                                                                                     tCCACCACATAATGCTTCACCCTGCCCCGGTTGATTGACAAATGCACAATTAGTCGCGCCGCTTACCCCAGCCAACAGTTTTTCCATTGGAGTCACATCATTTGCTTTGACACCTTTGGTCTGCATAAAGGGATGTTCTg                                                 >  2:812834/1‑140 (MQ=255)

                                                                                     tCCACCACATAATGCTTCACCCTGCCCCGGTTGATTGACAAATGCACAATTAGTCGCGCCGCTTACCCCAGCCAACAGTTTTTCCATTGGAGTCACATCATTTGCTTTGACACCTTTGGTCTGCATAAAGGGATGTTCTg                                                 <  1:1173786/140‑1 (MQ=255)

                                                                                      ccaccaCATAATGCTTCACCCTGCCCCGGTTGATTGACAAATGCACAATTAGTCGCGCCGCTTACCCCAGCCAACAGTTTTTCCATTGGAGTCACATCATTTGCTTTGACACCTTTGGTCTGCATAAAGGGATGTTCTGc                                                <  2:16126/140‑1 (MQ=255)

                                                                                      ccaccaCATAATGCTTCACCCTGCCCCGGTTGATTGACAAATGCACAATTAGTCGCGCCGCTTACCCCAGCCAACAGTTTTTCCATTGGAGTCACATCATTTGCTTTGACACCTTTGGTCTGCATAAAGGGATGTTCTGc                                                <  2:1624911/140‑1 (MQ=255)

                                                                                      ccaccaCATAATGCTTCACCCTGCCCCGGTTGATTGACAAATGCACAATTAGTCGCGCCGCTTACCCCAGCCAACAGTTTTTCCATTGGAGTCACATCATTTGCTTTGACACCTTTGGTCTGCATAAAGGGATGTTCTGc                                                >  2:345251/1‑140 (MQ=255)

                                                                                         ccacATAATGCTTCACCCTGCCCCGGTTGATTGACAAATGCACAATTAGTCGCGCCGCTTACCCCAGCCAACAGTTTTTCCATTGGAGTCACATCATTTGCTTTGACACCTTTGGTCTGCATAAAGGGATGTTCTGCGTg                                             >  2:220623/1‑140 (MQ=255)

                                                                                         ccacATAATGCTTCACCCTGCCCCGGTTGATTGACAAATGCACAATTAGTCGCGCCGCTTACCCCAGCCAACAGTTTTTCCATTGGAGTCACATCATTTGCTTTGACACCTTTGGTCTGCATAAAGGGATGTTCTGCGTg                                             >  2:864862/1‑140 (MQ=255)

                                                                                         ccacATAATGCTTCACCCTGCCCCGGTTGATTGACAAATGCACAATTAGTCGCGCCGCTTACCCCAGCCAACAGTTTTTCCATTGGAGTCACATCATTTGCTTTGACACCTTTGGTCTGCATAAAGGGATGTTCTGCGTg                                             >  1:1298828/1‑140 (MQ=255)

                                                                                           acaTAATGCTTCACCCTGCCCCGGTTGATTGACAAATGCACAATTAGTCGCGCCGCTTACCCCAGCCAACAGTTTTTCCATTGGAGTCACATCATTTGCTTTGACACCTTTGGTCTGCATAAAGGGATGTTCTGCGTGAt                                           >  1:1089006/1‑140 (MQ=255)

                                                                                           acaTAATGCTTCACCCTGCCCCGGTTGATTGACAAATGCACAATTAGTCGCGCCGCTTACCCCAGCCAACAGTTTTTCCATTGGAGTCACATCATTTGCTTTGACACCTTTGGTCTGCATAAAGGGATGTTCTGCGTGAt                                           <  2:2399569/140‑1 (MQ=255)

                                                                                           acaTAATGCTTCACCCTGCCCCGGTTGATTGACAAATGCACAATTAGTCGCGCCGCTTACCCCAGCCAACAGTTTTTCCATTGGAGTCACATCATTTGCTTTGACACCTTTGGTCTGCATAAAGGGATGTTCTGCGTGAt                                           >  1:1937851/1‑140 (MQ=255)

                                                                                           acaTAATGCTTCACCCTGCCCCGGTTGATTGACAAATGCACAATTAGTCGCGCCGCTTACCCCAGCCAACAGTTTTTCCATTGGAGTCACATCATTTGCTTTGACACCTTTGGTCTGCATAAAGGGATGTTCTGCGTGAt                                           <  1:1862812/140‑1 (MQ=255)

                                                                                           acaTAATGCTTCACCCTGCCCCGGTTGATTGACAAATGCACAATTAGTCGCGCCGCTTACCCCAGCCAACAGTTTTTCCATTGGAGTCACATCATTTGCTTTGACACCTTTGGTCTGCATAAAGGGATGTTCTGCGTGAt                                           <  1:48874/140‑1 (MQ=255)

                                                                                             aTAATGCTTCACCCTGCCCCGGTTGATTGACAAATGCACAATTAGTCGCGCCGCTTACCCCAGCCAACAGTTTTTCCATTGGAGTCACATCATTTGCTTTGACACCTTTGGTCTGCATAAAGGGATGTTCTGCGTGATTa                                         <  2:69120/140‑1 (MQ=255)

                                                                                             aTAATGCTTCACCCTGCCCCGGTTGATTGACAAATGCACAATTAGTCGCGCCGCTTACCCCAGCCAACAGTTTTTCCATTGGAGTCACATCATTTGCTTTGACACCTTTGGTCTGCATAAAGGGATGTTCTGCGTGATTa                                         >  2:2037501/1‑140 (MQ=255)

                                                                                               aaTGCTTCACCCTGCCCCGGTTGATTGACAAATGCACAATTAGTCGCGCCGCTTACCCCAGCCAACAGTTTTTCCATTGGAGTCACATCATTTGCTTTGACACCTTTGGTCTGCATAAAGGGATGTTCTGCGTGATTAAg                                       >  1:1233023/1‑140 (MQ=255)

                                                                                                aTGCTTCACCCTGCCCCGGTTGATTGACAAATGCACAATTAGTCGCGCCGCTTACCCCAGCCAACAGTTTTTCCATTGGAGTCACATCATTTGCTTTGACACCTTTGGTCTGCATAAAGGGATGTTCTGCGTGATTAAgg                                      <  2:848588/140‑1 (MQ=255)

                                                                                                aTGCTTCACCCTGCCCCGGTTGATTGACAAATGCACAATTAGTCGCGCCGCTTACCCCAGCCAACAGTTTTTCCATTGGAGTCACATCATTTGCTTTGACACCTTTGGTCTGCATAAAGGGATGTTCTGCGTGATTAAgg                                      <  2:1233023/140‑1 (MQ=255)

                                                                                                 tGCTTCACCCTGCCCCGGTTGATTGACAAATGCACAATTAGTCGCGCCGCTTACCCCAGCCAACAGTTTTTCCATTGGAGTCACATCATTTGCTTTGACACCTTTGGTCTGCATAAAGGGATGTTCTGCGTGATTAAGGt                                     >  1:2644837/1‑140 (MQ=255)

                                                                                                   cTTCACCCTGCCCCGGTTGATTGACAAATGCACAATTAGTCGCGCCGCTTACCCCAGCCAACAGTTTTTCCATTGGAGTCACATCATTTGCTTTGACACCTTTGGTCTGCATAAAGGGATGTTCTGCGTGATTAAgg                                      >  1:1708785/1‑137 (MQ=255)

                                                                                                    ttCACCCTGCCCCGGTTGATTGACAAATGCACAATTAGTCGCGCCGCTTACCCCAGCCAACAGTTTTTCCATTGGAGTCACATCATTTGCTTTGACACCTTTGGTCTGCATAAAGGGATGTTCTGCGTGATTAAgg                                      >  1:1404883/1‑136 (MQ=255)

                                                                                                     tCACCCTGCCCCGGTTGATTGACAAATGCACAATTAGTCGCGCCGCTTACCCCAGCCAACAGTTTTTCCATTGGAGTCACATCATTTGCTTTGACACCTTTGGTCTGCATAAAGGGATGTTCTGCGTGATTAAGGTAGaa                                 <  1:423258/140‑1 (MQ=255)

                                                                                                     tCACCCTGCCCCGGTTGATTGACAAATGCACAATTAGTCGCGCCGCTTACCCCAGCCAACAGTTTTTCCATTGGAGTCACATCATTTGCTTTGACACCTTTGGTCTGCATAAAGGGATGTTCTGCGTGATTAAGGTAGaa                                 <  1:872902/140‑1 (MQ=255)

                                                                                                     tCACCCTGCCCCGGTTGATTGACAAATGCACAATTAGTCGCGCCGCTTACCCCAGCCAACAGTTTTTCCATTGGAGTCACATCATTTGCTTTGACACCTTTGGTCTGCATAAAGGGATGTTCTGCGTGATTAAGGTAGaa                                 <  2:1298828/140‑1 (MQ=255)

                                                                                                     tCACCCTGCCCCGGTTGATTGACAAATGCACAATTAGTCGCGCCGCTTACCCCAGCCAACAGTTTTTCCATTGGAGTCACATCATTTGCTTTGACACCTTTGGTCTGCATAAAGGGATGTTCTGCGTGATTAAGGTAGaa                                 <  2:1332381/140‑1 (MQ=255)

                                                                                                      cACCCTGCCCCGGTTGATTGACAAATGCACAATTAGTCGCGCCGCTTACCCCAGCCAACAGTTTTTCCATTGGAGTCACATCATTTGCTTTGACACCTTTGGTCTGCATAAAGGGATGTTCTGCGTGATTAAGGTAGAAc                                >  1:2081892/1‑140 (MQ=255)

                                                                                                      cACCCTGCCCCGGTTGATTGACAAATGCACAATTAGTCGCGCCGCTTACCCCAGCCAACAGTTTTTCCATTGGAGTCACATCATTTGCTTTGACACCTTTGGTCTGCATAAAGGGATGTTCTGCGTGATTAAGGTAGAAc                                >  1:1436475/1‑140 (MQ=255)

                                                                                                            gCCCCGGTTGATTGACAAATGCACAATTAGTCGCGCCGCTTACCCCAGCCAACAGTTTTTCCATTGGAGTCACATCATTTGCTTTGACACCTTTGGTCTGCATAAAGGGATGTTCTGCGTGATTAAGGTAg                                   <  1:2458352/131‑1 (MQ=255)

                                                                                                            gCCCCGGTTGATTGACAAATGCACAATTAGTCGCGCCGCTTACCCCAGCCAACAGTTTTTCCATTGGAGTCACATCATTTGCTTTGACACCTTTGGTCTGCATAAAGGGATGTTCTGCGTGATTAAGGTAg                                   >  2:2458352/1‑131 (MQ=255)

                                                                                                             ccccGGTTGATTGACAAATGCACAATTAGTCGCGCCGCTTACCCCAGCCAACAGTTTTTCCATTGGAGTCACATCATTTGCTTTGACACCTTTGGTCTGCATAAAGGGATGTTCTGCGTGATTAAGGTAGaa                                 <  1:1813031/132‑1 (MQ=255)

                                                                                                             ccccGGTTGATTGACAAATGCACAATTAGTCGCGCCGCTTACCCCAGCCAACAGTTTTTCCATTGGAGTCACATCATTTGCTTTGACACCTTTGGTCTGCATAAAGGGATGTTCTGCGTGATTAAGGTAGaa                                 <  1:2182541/132‑1 (MQ=255)

                                                                                                             ccccGGTTGATTGACAAATGCACAATTAGTCGCGCCGCTTACCCCAGCCAACAGTTTTTCCATTGGAGTCACATCATTTGCTTTGACACCTTTGGTCTGCATAAAGGGATGTTCTGCGTGATTAAGGTAGaa                                 >  2:2182541/1‑132 (MQ=255)

                                                                                                             ccccGGTTGATTGACAAATGCACAATTAGTCGCGCCGCTTACCCCAGCCAACAGTTTTTCCATTGGAGTCACATCATTTGCTTTGACACCTTTGATCTGCATAAAGGGATGTTCTGCGTGATTAAGGTAGAACAtatcta                         >  1:1140262/1‑140 (MQ=255)

                                                                                                                cGGTTGATTGACAAATGCACAATTAGTCGCGCCGCTTACCCCAGCCAACAGTTTTTCCATTGGAGTCACATCATTTGCTTTGACACCTTTGGTCTGCATAAAGGGATGTTCTGCGTGATTAAGGTAGAACATATCTATcc                      >  2:1772859/1‑140 (MQ=255)

                                                                                                                  gTTGATTGACAAATGCACAATTAGTCGCGCCGCTTACCCCAGCCAACAGTTTTTCCATTGGAGTCACATCATTTGCTTTGACACCTTTGGTCTGCATAAAGGGATGTTCTGCGTGATTAAgg                                      <  2:448512/122‑1 (MQ=255)

                                                                                                                  gTTGATTGACAAATGCACAATTAGTCGCACCGCTTACCCCAGCCAACAGTTTTTCCATTGGAGTCACATCATTTGCTTTGACACCTTTGGTCTGCATAAAGGGATGTTCTGCGTGATTAAGGTAGAACATATCTATCCAc                    >  1:1622213/1‑140 (MQ=255)

                                                                                                                   ttgattgaCAAATGCACAATTAGTCGCGCCGCTTACCCCAGCCAACAGTTTTTCCATTGGAGTCACATCATTTGCTTTGACACCTTTGGTCTGCATAAAGGGATGTTCTGCGTGATTAAGGTAGAACATATCTATCCACg                   <  1:2217809/140‑1 (MQ=255)

                                                                                                                          aCAAATGCACAATTAGTCGCGCCGCTTACCCCAGCCAACAGTTTTTCCATTGGAGTCACATCATTTGCTTTGACACCTTTGGTCTGCATAAAGGGATGTTCTGCGTGATTAAGGTAGAACATATCTATCCACGGCGCGAt            <  2:211801/140‑1 (MQ=255)

                                                                                                                          aCAAATGCACAATTAGTCGCGCCGCTTACCCCAGCCAACAGTTTTTCCATTGGAGTCACATCATTTGCTTTGACACCTTTGGTCTGCATAAAGGGATGTTCTGCGTGATTAAGGTAGAACATATCTATCCACGGCGCGAt            >  1:983185/1‑140 (MQ=255)

                                                                                                                          aCAAATGCACAATTAGTCGCGCCGCTTACCCCAGCCAACAGTTTTTCCATTGGAGTCACATCATTTGCTTTGACACCTTTGGTCTGCATAAAGGGATGTTCTGCGTGATTAAGGTAGAACATATCTATCCACGGCGCGAt            <  1:812834/140‑1 (MQ=255)

                                                                                                                          aCAAATGCACAATTAGTCGCGCCGCTTACCCCAGCCAACAGTTTTTCCATTGGAGTCACATCATTTGCTTTGACACCTTTGGTCTGCATAAAGGGATGTTCTGCGTGATTAAGGTAGAACATATCTATCCACGGCGCGAt            <  1:274074/140‑1 (MQ=255)

                                                                                                                            aaaTGCACAATTAGTCGCGCCGCTTACCCCAGCCAACAGTTTTTCCATTGGAGTCACATCATTTGCTTTGACACCTTTGGTCTGCATAAAGGGATGTTCTGCGTGATTAAGGTAGAACATATCTATCCACGGCGCGATGa          <  1:1045425/140‑1 (MQ=255)

                                                                                                                             aaTGCACAATTAGTCGCGCCGCTTACCCCAGCCAACAGTTTTTCCATTGGAGTCACATCATTTGCTTTGACACCTTTGGTCTGCATAAAGGGATGTTCTGCGTGATTAAGGTAGAACATATCTATCCACGGCGCGATGAg         <  2:2056664/140‑1 (MQ=255)

                                                                                                                             aaTGCACAATTAGTCGCGCCGCTTACCCCAGCCAACAGTTTTTCCATTGGAGTCACATCATTTGCTTTGACACCTTTGGTCTGCATAAAGGGATGTTCTGCGTGATTAAGGTAGAACATATCTATCCACGGCGCGATGAg         <  1:2037501/140‑1 (MQ=255)

                                                                                                                                 cacaATTAGTCGCGCCGCTTACCCCAGCCAACAGTTTTTCCATTGGAGTCACATCATTTGCTTTGACACCTTTGGTCTGCATAAAGGGATGTTCTGCGTGATTAAGGTAGAACATATCTATCCACGGCGCGATGAgttgt     <  2:2564347/140‑1 (MQ=255)

                                                                                                                                    aaTTAGTCGCGCCGCTTACCCCAGCCAACAGTTTTTCCATTGGAGTCACATCATTTGCTTTGACACCTTTGGTCTGCATAAAGGGATGTTCTGCGTGATTAAGGTAGAACATATCTATCCACGGCGCGATGAGTTGTTGa  >  1:2047693/1‑140 (MQ=255)

GTGTTCCTCCACGTAAACCGCTTTTAAAACCACCACCAAAACCTGGTGCCTGATTCGCCTGGTTGAATAACGCAATCGCAGTGCATCCACCACATAATGCTTCACCCTGCCCCGGTTGATTGACAAATGCACAATTCGTCGCGCCGCTTACCCCAGCCAACAGTTTTTCCATTGGAGTCACATCATTTGCTTTGACACCTTTGGTCTGCATAAAGGGATGTTCTGCGTGATTAAGGTAGAACATATCTATCCACGGCGCGATGAGTTGTTGA  >  NC_000913/2883628‑2883899

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`