Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913357,8900CA25.0% 84.2 / 12.2 32L267F (TTG→TTT) cynRDNA‑binding transcriptional dual regulator CynR
Reads supporting (aligned to +/- strand):  ref base C (24/0);  new base A (0/8);  total (24/8)
Fisher's exact test for biased strand distribution p-value = 9.51e-08
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

AGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCAGCGGCTACCGTGATTCATTTCCGCCAACAACCGCGCATTTATCCAACGCCATGTGCAAAAATGCCTT‑CGCGGCGGCTGTCTGCCAGCTATTTTTCCGCCGCAACAAAA‑CCGCCGTTCTCTCCAGTAGTGGCGGGGCAAGA‑G‑AAATAGCTTTAAGCCCGTCATGTTGTGTGGCAATCGCTGCTGGTAACAATGTGGAAAGGGAAGTGCGGCGAATCAGCTCCAGAACCGCGCTAATTGAGT  >  NC_000913/357751‑358026
                                                                                                                                            |                                                                                                                                           
aGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCAGCGGCTACCGTGATTCATTTCCGCCAACAACCGCGCATTTATCCAACGCCATGTGCAAAAATGCCTT‑CGCGGCGGCTGTCTGCCAGCTATTTTTCCGCCGcaac                                                                                                                                             >  2:2096245/1‑140 (MQ=255)
  cgcATCAGGCAATTCCAGCCGCAGACCTGTGTCAGCGGCTACCGTGATTCATTTCCGCCAACAACCGCGCATTTATCCAACGCCATGTGCAAAAATGCCTT‑CGCGGCGGCTGTCTGCCAGCTATTTTTCCGCCGcaacaa                                                                                                                                           >  2:2312849/1‑140 (MQ=255)
  cgcATCAGGCAATTCCAGCCGCAGACCTGTGTCAGCGGCTACCGTGATTCATTTCCGCCAACAACCGCGCATTTATCCAACGCCATGTGCAAAAATGCCTT‑CGCGGCGGCTGTCTGCCAGCTATTTTTCCGCCGcaacaa                                                                                                                                           >  2:42923/1‑140 (MQ=255)
  cgcATCAGGCAATTCCAGCCGCAGACCTGTGTCAGCGGCTACCGTGATTCATTTCCGCCAACAACCGCGCATTTATCCAACGCCATGTGCAAAAATGCCTT‑CGCGGCGGCTGTCTGCCAGCTATTTTTCCGCCGcaacaa                                                                                                                                           >  1:2866049/1‑140 (MQ=255)
  cgcATCAGGCAATTCCAGCCGCAGA‑CTGTGTCAGCGGCTACCGTGATTCATTTCCGCCAACAACCGCGCATTTATCCAACGCCATGTGCAAAAATGCCTT‑CGCGGCGGCTGTCTGCCAGCTATTTTTCCGCCGCAACaaa                                                                                                                                          >  1:2200713/1‑140 (MQ=255)
      tCAGGCAATTCCAGCCGCAGACCTGTGTCAGCGGCTACCGTGATTCATTTCCGCCAACAACCGCGCATTTATCCAACGCCATGTGCAAAAATGCCTT‑CGCGGCGGCTGTCTGCCAGCTATTTTTCCGCCGCAACAAAA‑cc                                                                                                                                      >  1:741069/1‑140 (MQ=255)
       cAGGGAATTCCAGCCGCAGACCTGTGTCAGCGGCTACCGTGATTCATTTCCGCCAACAACCGCGCATTTATCCAACGCCATGTGCAAAAATGCCTT‑CGCGGCGGCTGTCTGCCAGCTATTTTTCCGCCGCAACAAAA‑ccg                                                                                                                                     >  1:752741/1‑140 (MQ=255)
       cAGGCAATTCCAGCCGCAGACCTGTGTCAGCGGCTACCGTGATTCATTTCCGCCAACAACCGCGCATTTATCCAACGCCATGTGCAAAAATGCCTT‑CGCGGCGGCTGTCTGCCAGCTATTTTTCCGCCGCAACAAAA‑ccg                                                                                                                                     >  1:2446146/1‑140 (MQ=255)
           cAATCCCACCCGCAG‑CTTGTGCCGGCGGCTCCCGTGATTCTTTCCCCCCAACACCCGCGCTTTTACCCACCCCCATGTGAAAAAATCCTTC‑CGCGGCGGCTGTCTGCCAGCTTTTTTCCCGCCGCAAAAAAA‑CCGCCGtt                                                                                                                                <  2:2200713/140‑1 (MQ=255)
            attcccAGCCGCAGCCCTGTGTCGGGGGCTCCCGTGTTTCTTTCCCCCCAACACCCGCGCTTTTACCCAACGCCATGTGAAAAAATGCCTT‑CGCGGCGGCTGTCGGCCAGTTTTTTTCCCGCCGCAAAAAAA‑CCGCCGtt                                                                                                                                <  2:231977/136‑1 (MQ=255)
            attcccACCCGCAGCCCTGTGTCAGCGGCTCCCGTGTTTCTTTCCCCCAAACACCCGCGTTTTTACCCACCGCCATGGAAAAAAATGCCTC‑CGCGGCGGCTGTCTGCCAGCTTTTTTCCCGCCGCAAAAAAA‑CCGCCGtt                                                                                                                                <  2:489446/136‑1 (MQ=255)
            aaTTCCAGCCGCAGACCTGTGTCAGCGGCTACCGTGATTCATTTCCGCCAACAACCGCGCATTTATCCAACGCCATGTGCAAAAATGCCTT‑CGCGGCGGCTGTCTGCCAGCTATTTTTCCGCCGCAACAAAA‑CCGCCGtt                                                                                                                                >  1:1297402/1‑140 (MQ=255)
                   gCCGCAGACCTGTGTCAGCGGCTACCGTGATTCATTTCCGCCAACAACCGCGCATTTATCCAACGCCATGTGCAAAAATGCCTT‑CGCGGCGGCTGTCTGCCAGCTATTTTTCCGCCGCAACAAAA‑CCGCCGTTCTCTCCa                                                                                                                         >  2:1194937/1‑140 (MQ=255)
                   gCCGCAGACCTGTGTCAGCGGCTACCGTGATTCATTTCCGCCAACAACCGCGCATTTATCCAACGCCATGTGCAAAAATGCCTT‑CGCGGCGGCTGTCTGCCAGCTATTTTTCCGCCGCAACAAAA‑CCGCCGTTCTCTCCa                                                                                                                         >  1:2671371/1‑140 (MQ=255)
                    ccGCAGACCTGTGTCAGCGGCTACCGTGATTCATTTCCGCCAACAACCGCGCATTTATCCAACGCCATGTGCAAAAATGCCTT‑CGCGGCGGCTGTCTGCCAGCTATTTTTCCGCCGCAACAAAA‑CCGCCGTTCTCTCCag                                                                                                                        >  1:2452430/1‑140 (MQ=255)
                    ccGCAGACCTGTGTCAGCGGCTACCGTGATTCATTTCCGCCAACAACCGCGCATTTATCCAACGCCATGTGCAAAAATGCCTT‑CGCGGCGGCTGTCTGCCAGCTATTTTTCCGCCGCAACAAAA‑CCGCCGTTCTCTCCag                                                                                                                        >  1:912984/1‑140 (MQ=255)
                       cAGACCTGTGTCAGCGGCTACCGTGATTCATTTCCGCCAACAACCGCGCATTTATCCAACGCCATGTGCAAAAATGCCTT‑CGCGGCGGCTGTCTGCCAGCTATTTTTCCGCCGCAACAAAA‑CCGCCGTTCTCTCCagtag                                                                                                                     >  1:233843/1‑140 (MQ=255)
                        aGACCTGTGTCAGCGGCTACCGTGATTCATTTCCGCCAACAACCGCGCATTTATCCAACGCCATGTGCAAAAATGCCTT‑CGCGGCGGCTGTCTGCCAGCTATTTTTCCGCCGCAACAAAA‑CCGCCGTTCTCTCCagtagt                                                                                                                    >  1:667851/1‑140 (MQ=255)
                        aGACCTGTGTCAGCGGCTACCGTGATTCATTTCCGCCAACAACCGCGCATTTATCCAACGCCATGTGCAAAAATGCCTT‑CGCGGCGGCTGTCTGCCAGCTATTTTTCCGCCGCAACAAAA‑CCGCCGTTCTCTCCagtagt                                                                                                                    >  2:913286/1‑140 (MQ=255)
                          aCCTGTGTCAGCGGCTACCGTGATTCATTTCCGCCAACAACCGCGCATTTATCCAACGCCATGTGCAAAAATGCCTT‑CGCGGCGGCTGTCTGCCAGCTATTTTTCCGCCGCAACAAAA‑CCGCCGTTCTCTCCAGTAGTgg                                                                                                                  >  1:2223672/1‑140 (MQ=255)
                              gtgtCAGCGGCTACCGTGATTCATTTCCGCCAACAACCGCGCATTTATCCAACGCCATGTGCAAAAATGCCTT‑CGCGGCGGCTGTCTGCCAGCTATTTTTCCGCCGCAACAAAA‑CCGCCGTTCTCTCCAGTAGTGGCggg                                                                                                              >  1:1772193/1‑140 (MQ=255)
                               tgtCAGCGGCTACCGTGATTCATTTCCGCCAACAACCGCGCATTTATCCAACGCCATGTGCAAAAATGCCTT‑CGCGGCGGCTGTCTGCCAGCTATTTTTCCGCCGCAACAAAA‑CCGCCGTTCTCTCCAGTAGTGGCgggg                                                                                                             >  2:1165169/1‑140 (MQ=255)
                                gccggCGGCTCCCGTATTTCTTTCCCCCCAACACCCGCGCTTTTACCCACCGCATTGTGAAAAAATGCCTC‑CGCGGCGGCTGTCTGCCAGTTTTTTTCCCGCCGAAAAAAAA‑CCGCCGTTCTCTCCAGTAGTGGCGGGGc                                                                                                            <  2:798517/136‑1 (MQ=255)
                                    gCGGCTACCGTGATTCATTTCCGCCAACAACCGCGCATTTATCCAACGCCATGTGCAAAAATGCCTT‑CGCGGCGGCTGTCTGCCAGCTATTTTTCCGCCGCAACAAAA‑CCGCCGTTCTCTCCAGTAGTGGCggggggaga                                                                                                        >  1:844185/1‑135 (MQ=255)
                                    gCGGCTACCGTGATTCATTTCCGCCAACAACCGCGCATTTATCCAACGCCATGTGCAAAAATGCCTT‑CGCGGCGGCTGTCTGCCAGCTATTTTTCCGCCGCAACAAAA‑CCGCCGTTCTCTCCAGTAGTGGCGGGGGAagg                                                                                                        >  1:1223277/1‑139 (MQ=255)
                                      ggCTACCGTGATTCATTTCCGCCAACAACCGCGCATTTATCCAACGCCATGTGCAAAAATGCCTT‑CGCGGCGGCTGTCTGCCAGCTATTTTTCCGCCGCAACAAAA‑CCGCCGTTCTCTCCAGTAGTGGCGGGGGgaga‑g‑a                                                                                                    >  1:1610540/1‑140 (MQ=255)
                                         tACCGTGATTCATTTCCGCCAACAACCGCGCATTTATCCAACGCCATGTGCAAAAATGCCTT‑CGCGGCGGCTGTCTGCCAGCTATTTTTCCGCCGCAACAAAA‑CCGCCGTTCTCTCCAGTAGTGGCGGGGGGAGA‑G‑gaaa                                                                                                 >  2:2857311/1‑139 (MQ=255)
                                         tACCGTGATTCATTTCCGCCAACAACCGCGCATTTATCCAACGCCATGTGCAAAAATGCCTT‑CGCGGCGGCTGTCTGCCAGCTATTTTTCCGCCGCAACAAAA‑CCGCCGTTCTCTCCAGTAGTGGCGGGGGGAGA‑G‑aaaa                                                                                                 >  1:115670/1‑139 (MQ=255)
                                         tACCGTGATTCATTTCCGCCAACAACCGCGCATTTATCCAACGCCATGTGCAAAAATGCCTT‑CGCGGCGGCTGTCTGCCAGCTATTTTTCCGCCGCAACAAAA‑CCGCCGTTCTCTCCAGTAGTGGCGGGGCGaggggaaa                                                                                                   >  1:1636398/1‑134 (MQ=255)
                                           ccGTGATTCATTTCCGCCAACAACCGCGCATTTATCCAACGCCATGTGCAAAAATGCCTT‑CGCGGCGGCTGTCTGCCAGCTATTTTTCCGCCGCAACAAAA‑CCGCCGTTCTCTCCAGTAGTGGCGGGGGGAGA‑G‑aaaaaa                                                                                               >  2:2094424/1‑137 (MQ=255)
                                                tttCATTCCCCCCAACACCCGCGCTTTAACCCACCGCCA‑GGAAAAAAAAGCCTTCCGCGGGGGCTGTCTCCCAGTTTTTTTCCCGCCGAAAAAAAA‑CCGCCGTTCTCTCCAGTAGTGGCGGGGCAAGA‑G‑AAATAGCTTTa                                                                                          <  2:489070/139‑1 (MQ=255)
                                                   cATTCCCCCCAACACCCGCGTTTTTACCCACCCCAATGTAAAAAAATGCCTC‑CGCGGCGGTTGTCTGCCAGTTTTTTTCCCGCCAAAAAAAAC‑CCGCCGTTCTCTCCAGTAGTGGCGGGGCAAGA‑G‑AAATAGCTTTAAGc                                                                                       <  2:1223277/140‑1 (MQ=255)
                                                   cATTCCCCCCAACACCCGCGCTTTTACCCACCCCCTTGTAAAAAAAGGCCTC‑CGGGGGGGTTTCCGGCCATTTTTTTTCCCGCCGCAAAAAAA‑CCGCCGTTCTCTCCAGTAGTGGCGGGGCAAGA‑G‑AAATAGCTTTAAGc                                                                                       <  2:233843/140‑1 (MQ=255)
                                                     ttccccccAACACCCGCCCTTTTACCCACCGCCATGTAAAAAATTCCCTC‑CGCGGCGGCTGTCTGCCAGCTTTTTTCCCGCCGCAAAAAAA‑CCGCCGTTCTCTCCAGTAGTGGCGGGGCAAGA‑G‑AAATAGCTTTAAGccc                                                                                     <  2:277537/134‑1 (MQ=255)
                                                           ccAACACCCGCGCTTTTACCCAACGCCATGGGAAAAAATGCCTT‑CGGGGCGGTTTTCGGCCGTTTTTTTTCCCGCCGAAACAAAA‑CCGCCGTTCTCTCCAGTAGTGGCGGGGCAAGA‑G‑AAATAGCTTTAAGCCCGTCAtg                                                                               <  2:81706/140‑1 (MQ=255)
                                                                         tttACCCACCGCTTTGTGCAAAAGTGCCTC‑CGGGGGGGTTGTCGGCCAGTTTTTTTCCCGCCGAAAAAAAG‑CCGCCGTTCTCTCCAGTAGTGGCGGGGCAAGA‑G‑AAATAGCTTTAAGCCCGTCATGTTGTGTGGCAATCg                                                                 <  2:1703124/140‑1 (MQ=255)
                                                                           tacccACCGCCATGTAAAAAAATGCTTT‑CGCGGCGGTTGTCGGCAGGTTTTTTTACCGCCCAAACAAAC‑CCGCCGTTCTCTCCAGTAGTGGCGGGGCAAGA‑G‑AAATAGCTTTAAGCCCGTCATGTTGTGTGGCAATCgct                                                               <  2:2557782/137‑1 (MQ=255)
                                                                           tacccACCGCCATGTAAAAAAATCCTTC‑CGCGGGGGTTTCCTCCCGGTTTTTTTCCCGCCGAAAAAAAA‑CCGCCGTTCTCTCCAGTAGTGGCGGGGCAAGA‑G‑AAATAGCTTTAAGCCCGTCATGTTGTGTGGCAATCgct                                                               <  2:115670/137‑1 (MQ=255)
                                                                            acccAACCCCATGTAAAAAAATGCCTG‑CGGGGCGGCTGTCTCCCAGTTTTTTTCCCCCCGCAAAAAAA‑CCGCCGTTCTCTCCAGTAGTGGCGGGGCAAGA‑G‑AAATAGCTTTAAG‑CCGTCATGTTGTGTGGCAATCgctgc                                                             <  2:1309817/138‑1 (MQ=255)
                                                                                aaCGCCATGTGCAAAAATGCCTT‑CGCGGCGGCTGTCTGCCAGCTATTTTTCCGCCGCAACAAAA‑CCGCCGTTCTCTCCAGTAGTGGCGGGGGAAGA‑GAAAAAAATTTTAAACCCG‑CCTGTTTTGTGGGGATCGCCGCTgg                                                          >  1:2797629/1‑140 (MQ=25)
                                                                                aaCGCCATGTGAAAAAATGCCTC‑CGCGGCGGTTGTCTGCCATTTTTTTTCCCGCCGAAAAAAAA‑CCGCCGTTCTCTCCAGTAGTGGCGGGGCAAGA‑G‑AAATAGCTTTAAGCCCGTCATGTTGTGTGGCAATCGCTGCTgg                                                          <  2:89052/140‑1 (MQ=255)
                                                                                  ccccATGTAAAAAAATCCCTG‑CGCGGCGGCTGTCGGCCAGCTTTTTTCCCGCCGCAAAAAAA‑CCGCCGTTCTCTCCAGTAGTGGCGGGGCAAGA‑G‑AAATAGCTTTAAGCCCGTCATGTTGTGTGGCAATCGCTGCTGGTa                                                        <  1:878486/138‑1 (MQ=255)
                                                                                  cGCCATGTGCAAAAATGCCTT‑CGCGGCGGCTGTCTGCCAGCTATTTTTCCGCCGCAACAAAA‑CCGCCGTTCTCTCCAGTAGTGGCGGGGGGAGAGG‑AAAAAAATTTAAACCC‑TCCTGTTTTGTGGGGGTCTCTGCTgggg                                                        >  2:1507645/1‑138 (MQ=25)
                                                                                         tccAAAAATGCTTC‑CGCGGGGATTGTTGACCAACTATTTTCCCGCCGCAAAAAAA‑CCGCCGTTCTCTCCAGTAGTGGCGGGGCAAGA‑G‑AAATAGCTTTAAGCCCGTCATGTTGTGTGGCAATCGCTGCTGGTAACAAtgt                                                 <  1:1914280/138‑1 (MQ=255)
                                                                                         taaaaaaaTCCCTC‑CGCGGGGGTTGTCTGCCAGTTTTTTTCCCGCCGAAAAAAAA‑CCGCCGTTCTCTCCAGTAGTGGCGGGGCAAGA‑G‑AAATAGCTTTAAGCCCGTCATGTTGTGTGGCAATCGCTGCTGGTAACAAtgt                                                 <  2:1919847/137‑1 (MQ=255)
                                                                                         agaaaaaaTGCCTT‑CGCGGGGCCTGTCTGCCAGTTTTTTTCCCGCCACAAAAAAA‑CCGCCGTTCTCTCCAGTAGTGGCGGGGCAAGA‑G‑AAATAGCTTTAAGCCCGTCATGTTGTGTGGCAATCGCTGCTGGTAACAAtgt                                                 <  2:912984/137‑1 (MQ=255)
                                                                                                        ggggggggcTGTCTGCCATTTTTTTTCCCGCCGCAAAAAAA‑CCGCCGTTCTCTCCAGTAGTGGCGGGGCAAGA‑G‑AAATAGCTTTAAGCCCGTCATGTTGTGTGGCAATCGCTGCTGGTAACAATGTGGAAAGGGAAGTgc                                   <  2:1569599/134‑1 (MQ=255)
                                                                                                        cggggcggcTTCCTGCAAGTTTTTTTCCCGCCCAAAAAAAG‑CCGCCGTTCTCTCCAGTAGTGGCGGGGCAAGA‑G‑AAATAGCTTTAAGCCCGTCATGTTGTGTGGCAATCGCTGCTGGTAACAATGTGGAAAGGGAAGTgc                                   <  2:844185/137‑1 (MQ=255)
                                                                                                              ggcTGTCTGCCAGTTTTTTTCCCGCCGCAAAAAAA‑CCGCCGTTCTCTCCAGTAGTGGCGGGGCAAGA‑G‑AAATAGCTTTAAGCCCGTCATGTTGTGTGGCAATCGCTGCTGGTAACAATGTGGAAAGGGAAGTGCGGCGaa                             <  1:1706027/140‑1 (MQ=255)
                                                                                                                ttttctcCCAGTTTTTTTCCCGCCAAAAAAAAA‑CCGCCGTTCTCTCCAGTAGTGGCGGGGCAAGA‑G‑AAATAGCTTTAAGCCCGTCATGTTGTGTGGCAATCGCTGCTGGTAACAATGTGGAAAGGGAAGTGCGGCGAATc                           <  2:2797629/137‑1 (MQ=255)
                                                                                                                ctttCTGCCAGCTTTTTTCCCGCCGCAAAAAAA‑CCGCCGTTCTCTCCAGTAGTGGCGGGGCAAGA‑G‑AAATAGCTTTAAGCCCGTCATGTTGTGTGGCAATCGCTGCTGGTAACAATGTGGAAAGGGAAGTGCGGCGAATc                           <  1:913286/137‑1 (MQ=255)
                                                                                                                            tttttttACCCCCCAAAAAAATCCGCCGTTCTCTCCAGTAGTGGCGGGGCAAGA‑G‑AAATAGCTTTAAGCCCGTCATGTTGTGTGGCAATCGCTGCTGGTAACAATGTGGAAAGGGAAGTGCGGCGAATCAGCTCCAGAAc                <  1:703796/138‑1 (MQ=255)
                                                                                                                             tttttcCCGCCGCAAAAAAA‑CCGCCGTTCTCTCCAGTAGTGGCGGGGCAAGA‑G‑AAATAGCTTTAAGCCCGTCATGTTGTGTGGCAATCGCTGCTGGTAACAATGTGGAAAGGGAAGTGCGGCGAATCAGCTCCAGAACcg              <  1:2453179/139‑1 (MQ=255)
                                                                                                                              tttttGCGCCGCAAAAAGC‑CCGCCGTTCTCTCCAGTAGTGGCGGGGCAAGA‑G‑AAATAGCTTTAAGCCCGTCATGTTGTGTGGCAATCGCTGCTGGTAACAATGTGGAAAGGGAAGTGCGGCGAATCAGCTCCAGAACcgc             <  2:324592/140‑1 (MQ=255)
                                                                                                                               tttcCCGCCCCAAAAAAA‑CCGCCGTTCTCTCCAGTAGTGGCGGGGCAAGA‑G‑AAATAGCTTTAAGCCCGTCATGTTGTGTGGCAATCGCTGCTGGTAACAATGTGGAAAGGGAAGTGCGGCGAATCAGCTCCAGAACcgcg            <  2:2562901/140‑1 (MQ=255)
                                                                                                                               tttcCCCCCGAAAAAAAA‑CCGCCGTTCTCTCCAGTAGTGGCGGGGCAAGA‑G‑AAATAGCTTTAAGCCCGTCATGTTGTGTGGCAATCGCTGCTGGTAACAATGTGGAAAGGGAAGTGCGGCGAATCAGCTCCAGAACcgcg            <  1:1165169/140‑1 (MQ=255)
                                                                                                                                     gccgcAACAAAA‑CCGCCGTTCTCTCCAGTAGTGGCGGGGCAAGA‑G‑AAATAGCTTTAAGCCCGTCATGTTGTGTGGCAATCGCTGCTGGTAACAATGTGGAAAGGGAAGTGCGGCGAATCAGCTCCAGAACCGCGCTAAtt      <  1:2235322/140‑1 (MQ=255)
                                                                                                                                     cccgcACAAAAG‑CCGCCGTTCTCTCCAGTAGTGGCGGGGCAAGA‑G‑AAATAGCTTTAAGCCCGTCATGTTGTGTGGCAATCGCTGCTGGTAACAATGTGGAAAGGGAAGTGCGGCGAATCAGCTCCAGAACCGCGCTAAtt      <  1:285481/139‑1 (MQ=255)
                                                                                                                                         caaaaaAA‑CCGCCGTTCTCTCCAGTAGTGGCGGGGCAAGA‑G‑AAATAGCTTTAAGCCCGTCATGTTGTGTGGCAATCGCTGCTGGTAACAATGTGGAAAGGGAAGTGCGGCGAATCAGCTCCAGAACCGCGCTAATTGAGt  <  1:1619810/140‑1 (MQ=255)
                                                                                                                                            |                                                                                                                                           
AGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCAGCGGCTACCGTGATTCATTTCCGCCAACAACCGCGCATTTATCCAACGCCATGTGCAAAAATGCCTT‑CGCGGCGGCTGTCTGCCAGCTATTTTTCCGCCGCAACAAAA‑CCGCCGTTCTCTCCAGTAGTGGCGGGGCAAGA‑G‑AAATAGCTTTAAGCCCGTCATGTTGTGTGGCAATCGCTGCTGGTAACAATGTGGAAAGGGAAGTGCGGCGAATCAGCTCCAGAACCGCGCTAATTGAGT  >  NC_000913/357751‑358026

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑