| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,336,669 | G→T | intergenic (‑25/+124) | yfaA ← / ← gyrA | DUF2138 domain‑containing protein YfaA/DNA gyrase subunit A |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,336,669 | 0 | G | T | 99.2% | 440.9 / ‑5.6 | 124 | intergenic (‑25/+124) | yfaA/gyrA | DUF2138 domain‑containing protein YfaA/DNA gyrase subunit A |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base T (64/59); minor base A (0/1); total (64/60) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.84e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 127 total aligned reads displayed.
GGCCCACTGCCAGCATATTGCAACGCCCAGACGCCAGCGGAAAGCAGTGCTATTGCGCCAAAACCTACAAGACCATAGAACCGCCAGCCTTTCGCCTTTTTTTCACCACTCATTGCCACATTCCTTGTGTATAGCCAGCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACTTTTCAATTCAAACAAGGGAGATAGCTCCCTTTTGGCATGAAGAAGTAAAATTATTCTTCTTC > NC_000913/2336532‑2336804 | ggCCCACTGCCAGCATATTGCAACGCCCAGACGCCAGCGGAAAGCAGTGCTATTGCGCCAAAACCTACAAGACCATAGAACCGCCAGCCTTTCGCCTTTTTTTCACCACTCATTGCCACATTCCTTGTGTATagccatcc > 1:2371583/1‑140 (MQ=255) gCCCACTGCCAGCATATTGCAACGCCCAGACGCCAGCGGAAAGCAGTGCTATTGCGCCAAAACCTACAAGACCATAGAACCGCCAGCCTTTCGCCTTTTTTTCACCACTCATTGCCACATTCCTTGTGTATAgccatcca > 1:2526289/1‑140 (MQ=255) tGCCAGCATATTGCAACGCCCAGACGCCAGCGGAAAGCAGTGCTATTGCGCCAAAACCTACAAGACCATAGAACCGCCAGCCTTTCGCCTTTTTTTCACCACTCATTGCCACATTCCTTGTGTATAGCCATCCAtttttt > 1:797921/1‑140 (MQ=255) gCATATTGCAACGCCAAGACGCCAGCGGAAAGCAGTGCTATTGCGCCAAAACCTAAAAGACCATAGAACCGCCAGCCTTTCGCCTTTTTTTCACCACTCATTGCCACATTCCTTGTGTATAGCCATCCATTTTTTACggg < 2:775479/140‑1 (MQ=255) cATATTGCAACGCCCAGACGCCAGCGGAAAGCAGTGCTATTGCGCCAAAACCTACAAGACCATAGAACCGCCAGCCTTTCGCCTTTTTTTCACCACTCATTGCCACATTCCTTGTGTATAGCCATCCATTTTTTACGGGc > 1:473767/1‑140 (MQ=255) cATATTGCAACGCCCAGACGCCAGCGGAAAGCAGTGCTATTGCGCCAAAACCTACAAGACCATAGAACCGCCAGCCTTTCGCCTTTTTTTCACCACTCATTGCCACATTCCTTGTGTATAGCCATCCATTTTTTACGGGc < 2:220627/140‑1 (MQ=255) atatTGCAACGCCCAGACGCCAGCGGAAAGCAGTGCTATTGCGCCAAAACCTACAAGACCATAGAACCGCCAGCCTTTCGCCTTTTTTTCACCACTCATTGCCACATTCCTTGTGTATAGCCATCCATTTTTTACGGGca < 1:2655712/140‑1 (MQ=255) ttGCAACGCCCAGACGCCAGCGGAAAGCAGTGCTATTGCGCCAAAACCTACAAGACCATAGAACCGCCAGCCTTTCGCCTTTTTTTCACCACTCATTGCCACATTCCTTGTGTATAGCCATCCATTTTTTACGGGCACAg < 1:996911/140‑1 (MQ=255) ttGCAACGCCCAGACGCCAGCGGAAAGCAGTGCTATTGCGCCAAAACCTACAAGACCATAGAACCGCCAGCCTTTCGCCTTTTTTTCACCACTCATTGCCACATTCCTTGTGTATAGCCATCCATTTTTTACGGGCACAg > 1:255227/1‑140 (MQ=255) gCAACGCCCAGACGCCAGCGGAAAGCAGTGCTATTGCGCCAAAACCTACAAGACCATAGAACCGCCAGCCTTTCGCCTTTTTTTCACCACTCATTGCCACATTCCTTGTGTATAGCCATCCATTTTTTACGGGCACAGcc < 1:2033340/140‑1 (MQ=255) gCAACGCCCAGACGCCAGCGGAAAGCAGTGCTATTGCGCCAAAACCTACAAGACCATAGAACCGCCAGCCTTTCGCCTTTTTTTCACCACTCATTGCCACATTCCTTGTGTATAGCCATCCATTTTTTACGGGCACAGcc < 2:2243554/140‑1 (MQ=255) gCAACGCCAAGACGCCAGCGGAAAGCAGTGCTATTGCGCCAAATCCTACAAGACCATAGAACCGCCAGCCTTTCGCCTTTTTTTCACCACTCATTGCCACATTCCTTGTGTATAGCCATCCATTTTTTACGGGCACAGcc < 1:2462141/140‑1 (MQ=255) gCCCAGACGCCAGCGGAAAGCAGTGCTATTGCGCCAAAACCTACAAGACCATAGAACCGCCAGCCTTTCGCCTTTTTTTCACCACTCATTGCCACATTCCTTGTGTATAGCCATCCATTTTTTACGGGCACAGCCAAACt < 2:473767/140‑1 (MQ=255) gCCCAGACGCCAGCGGAAAGCAGTGCTATTGCGCCAAAACCTACAAGACCATAGAACCGCCAGCCTTTCGCCTTTTTTTCACCACTCATTGCCACATTCCTTGTGTATAGCCATCCATTTTTTACGGGCACAGCCAAACt > 2:1865393/1‑140 (MQ=255) cccAGACGCCAGCGGAAAGCAGTGCTATTGCGCCAAAACCTACAAGACCATAGAACCGCCAGCCTTTCGCCTTTTTTTCACCACTCATTGCCACATTCCTTGTGTATAGCCATCCATTTTTTACGGGCACAGcc < 2:171911/134‑1 (MQ=255) cccAGACGCCAGCGGAAAGCAGTGCTATTGCGCCAAAACCTACAAGACCATAGAACCGCCAGCCTTTCGCCTTTTTTTCACCACTCATTGCCACATTCCTTGTGTATAGCCATCCATTTTTTACGGGCACAGCCAAACtt > 2:1134305/1‑140 (MQ=255) cccAGACGCCAGCGGAAAGCAGTGCTATTGCGCCAAAACCTACAAGACCATAGAACCGCCAGCCTTTCGCCTTTTTTTCACCACTCATTGCCACATTCCTTGTGTATAGCCATCCATTTTTTACGGGCACAGCCAAACtt > 2:1505914/1‑140 (MQ=255) ccAGACGCCAGCGGAAAGCAGTGCTATTGCGCCAAAACCTACAAGACCATAGAACCGCCAGCCTTTCGCCTTTTTTTCACCACTCATTGCCACATTCCTTGTGTATAGCCATCCATTTTTTACGGGCACAg < 2:1118025/131‑1 (MQ=255) ccAGACGCCAGCGGAAAGCAGTGCTATTGCGCCAAAACCTACAAGACCATAGAACCGCCAGCCTTTCGCCTTTTTTTCACCACTCATTGCCACATTCCTTGTGTATAGCCATCCATTTTTTACGGGCACAg > 1:1118025/1‑131 (MQ=255) cAGACGCCAGCGGAAAGCAGTGCTATTGCGCCAAAACCTACAAGACCATAGAACCGCCAGCCTTTCGCCTTTTTTTCACCACTCATTGCCACATTCCTTGTGTATAGCCATCCATTTTTTACGGGCACAGCCAAACTTTa < 2:657400/140‑1 (MQ=255) cAGACGCCAGCGGAAAGCAGTGCTATTGCGCCAAAACCTACAAGACCATAGAACCGCCAGCCTTTCGCCTTTTTTTCACCACTCATTGCCACATTCCTTGTGTATAGCCATCCATTTTTTACGGGCACAGCCAAACTTTa < 1:1505914/140‑1 (MQ=255) gccGCCAGCGGAAGGCAGGGCTATGGCGCCAAACCCTACAAGACCATAGAACCGCCAGCCTTTCGCCTTTTTTTCACCACTCATTGCCACATTCCTTGTGTATAGCCATCCATTTTTTACGGGCACAGCCAAACTTTAcc < 2:2757559/138‑1 (MQ=255) gACGCCAGCGGAAAGCAGTGCTATTGCGCCAAAACCTACAAGACCATAGAACCGCCAGCCTTTCGCCTTTTTTTCACCACTCATTGCCACATTCCTTGTGTATAGCCATCCATTTTTTACGGGCACAGCCAAACTTTAcc < 2:425172/140‑1 (MQ=255) gACGCCAGCGGAAAGCAGTGCTATTGCGCCAAAACCTACAAGACCATAGAACCGCCAGCCTTTCGCCTTTTTTTCACCACTCATTGCCACATTCCTTGTGTATAGCCATCCATTTTTTACGGGCACAGCCAAACTTTAcc < 1:1505180/140‑1 (MQ=255) aCGCCAGCGGAAAGCAGTGCTATTGCGCCAAAACCTACAAGACCATAGAACCGCCAGCCTTTCGCCTTTTTTTCACCACTCATTGCCACATTCCTTGTGTATAGCCATCCATTTTTTACGGGCACAGCCAAACTTTACCg < 2:2526289/140‑1 (MQ=255) aCGCCAGCGGAAAGCAGTGCTATTGCGCCAAAACCTACAAGACCATAGAACCGCCAGCCTTTCGCCTTTTTTTCACCACTCATTGCCACATTCCTTGTGTATAGCCATCCATTTTTTACGGGCACAGCCAAACTTTACCg < 2:864871/140‑1 (MQ=255) aGCGGAAAGCAGTGCTATTGCGCCAAAACCTACAAGACCATAGAACCGCCAGCCTTTCGCCTTTTTTTCACCACTCATTGCCACATTCCTTGTGTATAGCCATCCATTTTTTACGGGCACAGCCAAACTTTACCGTGccc > 1:2583291/1‑140 (MQ=255) gCGGAAAGCAGTGCTATTGCGCCAAAACCTACAAGACCATAGAACCGCCAGCCTTTCGCCTTTTTTTCACCACTCATTGCCACATTCCTTGTGTATAGCCATCCATTTTTTACGGGCACAGc < 1:1560452/122‑1 (MQ=255) aGCAGTGCTATTGCGCCAAAACCTACAAGACCATAG‑ACCGCCAGCCTTTCGCCTTTTTTTCACCACTCATTGCCACATTCCTTGTGTATAGCCATCCATTTTTTACGGGCACAGCCAAACTTTACCg > 2:2692429/1‑127 (MQ=255) aGCAGTGCTATTGCGCCAAAACCTACAAGACCATAG‑ACCGCCAGCCTTTCGCCTTTTTTTCACCACTCATTGCCACATTCCTTGTGTATAGCCATCCATTTTTTACGGGCACAGCCAAACTTTACCg < 1:2692429/127‑1 (MQ=255) aGTTCTTTTGCGCCAAATCCTTCAACCCTATAAAACCGCCAGCCTTTCGCCTTTTTTTCACCACTCATTGCCACATTCCTTGTGTATAGCCAACCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACa < 1:392849/140‑1 (MQ=255) aGTGCTATTGCGCCAAAACCTACAAGCCCATAGAACCGCCAGCCTTTCGCCTTTTTTTCACCACTCATTGCCACATTCCTTGTGTATAGCCATCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACa < 1:1865559/140‑1 (MQ=255) gTGCTATTGCACCAAAACCTACAAGACCATAGAACCGCCAGCCTTTCGCCTTTTTTTCACCACTCATTGCCACATTCCTTGTGTATAGCCATCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACaa > 1:2705866/1‑140 (MQ=255) tGCGCCAAAACCTACAAGACCATAGAACCGCCAGCCTTTCGCCTTTTTTTCACCACTCATTGCCACATTCCTTGTGTATAGCCATCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCa < 1:230772/140‑1 (MQ=255) gcgcCAAAACCTACAAGACCATAGAACCGCCAGCCTTTCGCCTTTTTTTCACCACTCATTGCCACATTCCTTGTGTATAGCCATCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAg > 2:1719251/1‑140 (MQ=255) cgcCAAAACCTACAAGACCATAGAACCGCCAGCCTTTCGCCTTTTTTTCACCACTCATTGCCACATTCCTTGTGTATAGCCATCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGa > 1:2805352/1‑140 (MQ=255) cgcCAAAACCTACAAGACCATAGAACCGCCAGCCTTTCGCCTTTTTTTCACCACTCATTGCCACATTCCTTGTGTATAGCCATCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGa > 1:1100429/1‑140 (MQ=255) ccAAAACCTACAAGACCATAGAACCGCCAGCCTTTCGCCTTTTTTTCACCACTCATTGCCACATTCCTTGTGTATAGCCATCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACt > 2:257383/1‑140 (MQ=255) aaaCCTACAAGACCATAGAACCGCCAGCCTTTCGCCTTTTTTTCACCACTCATTGCCACATTCCTTGTGTATAGCCATCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTg > 1:2474835/1‑140 (MQ=255) aaaCCTACAAGACCATAGAACCGCCAGCCTTTCGCCTTTTTTTCACCACTCATTGCCACATTCCTTGTGTATAGCCATCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTg > 1:1297548/1‑140 (MQ=255) aaaCCTACAAGACCATAGAACCGCCAGCCTTTCGCCTTTTTTTCACCACTCATTGCCACATTCCTTGTGTATAGCCATCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTg < 1:1719251/140‑1 (MQ=255) aGACCATAGAACCGCCAGCCTTTCGCCTTTTTTTCACCACTCATTGCCACATTCCTTGTGTATAGCCATCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGa < 2:274944/140‑1 (MQ=255) cATAGAACCGCCAGCCTTTCGCCTTTTTTTCACCACTCATTGCCACATTCCTTGTGTATAGCCATCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACttt < 1:322329/126‑1 (MQ=255) cATAGAACCGCCAGCCTTTCGCCTTTTTTTCACCACTCATTGCCACATTCCTTGTGTATAGCCATCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTg > 2:704326/1‑127 (MQ=255) cATAGAACCGCCAGCCTTTCGCCTTTTTTTCACCACTCATTGCCACATTCCTTGTGTATAGCCATCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTg < 1:704326/127‑1 (MQ=255) cATAGAACCGCCAGCCTTTCGCCTTTTTTTCACCACTCATTGCCACATTCCTTGTGTATAGCCATCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACttt > 2:1508144/1‑140 (MQ=255) aTAGAACCGCCAGCCTTTCGCCTTTTTTTCACCACTCATTGCCACATTCCTTGTGTATAGCCATCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACtttt < 2:1100429/140‑1 (MQ=255) aTAGAACCGCCAGCCTTTCGCCTTTTTTTCACCACTCATTGCCACATTCCTTGTGTATAGCCATCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACtttt < 2:2805352/140‑1 (MQ=255) tAGAACCGCCAGCCTTTCGCCTTTTTTTCACCACTCATTGCCACATTCCTTGTGTATAGCCATCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACTTttc > 2:1829539/1‑140 (MQ=255) tAGAACCGCCAGCCTTTCGCCTTTTTTTCACCACTCATTGCCACATTCCTTGTGTATAGCCATCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACTTttc > 2:244996/1‑140 (MQ=255) aaCCGCCAGCCTTTCGCCTTTTTTTCACCACTCATTGCCACATTCCTTGTGTATAGCCATCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACTTttcaat < 2:1979899/140‑1 (MQ=255) aaCCGCCAGCCTTTCGCCTTTTTTTCACCACTCATTGCCACATTCCTTGTGTATAGCCATCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACTTttcaat < 1:2062874/140‑1 (MQ=255) aaCCGCCAGCCTTTCGCCTTTTTTTCACCACTCATTGCCACATTCCTTGTGTATAGCCATCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACTTttcaat < 1:1581521/140‑1 (MQ=255) ccGCCAGCCTTTCGCCTTTTTTTCACCACTCATTGCCACATTCCTTGTGTATAGCCATCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACTTttcaattc < 2:1929789/140‑1 (MQ=255) ccGCCAGCCTTTCGCCTTTTTTTCACCACTCATTGCCACATTCCTTGTGTATAGCCATCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACTTttcaattc > 2:664038/1‑140 (MQ=255) ccGCCAGCCTTTCGCCTTTTTTTCACCACTCATTGCCACATTCCTTGTGTATAGCCATCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACTTttcaattc > 2:805564/1‑140 (MQ=255) ccGCCAGCCTTTCGCCTTTTTTTCACCACTCATTGCCACATTCCTTGTGTATAGCCATCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACTTttcaattc < 2:895165/140‑1 (MQ=255) gCCAGCCTTTCGCCTTTTTTTCACCACTCATTGCCACATTCCTTGTGTATAGCCATCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACTTttcaattcaa < 1:805564/140‑1 (MQ=255) gCCAGCCTTTCGCCTTTTTTTCACCACTCATTGCCACATTCCTTGTGTATAGCCATCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACTTttcaattcaa > 1:496338/1‑140 (MQ=255) ccAGCCTTTCGCCTTTTTTTCACCACTCATTGCCACATTCCTTGTGTATAGCCATCCATTTTTTACGGGCACAGCTAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACTTTTCAATTCaaa > 1:2381248/1‑140 (MQ=255) ccAGCCTTTCGCCTTTTTTTCACCACTCATTGCCACATTCCTTGTGTATAGCCATCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACTTTTCAATTCaaa > 1:202181/1‑140 (MQ=255) ccAGCCTTTCGCCTTTTTTTCACCACTCATTGCCACATTCCTTGTGTATAGCCATCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACTTTTCAATTCaaa < 2:2424952/140‑1 (MQ=255) ccAGCCTTTCGCCTTTTTTTCACCACTCATTGCCACATTCCTTGTGTATAGCCATCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACTTTTCAATTCaaa > 1:2424952/1‑140 (MQ=255) ccAGCCTTTCGCCTTTTTTTCACCACTCATTGCCACATTCCTTGTGTATAGCCATCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACTTTTCAATTCaaa > 1:2470893/1‑140 (MQ=255) aGCCTTTCGCCTTTTTTTCACCACTCATTGCCACATTCCTTGTGTATAGCCATCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACTTTTCAATTCAAACa < 2:1684657/140‑1 (MQ=255) ccTTTCGCCTTTTTTTCACCACTCATTGCCACATTCCTTGTGTATAGCCATCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACTTTTCAATTCAAACAAg < 1:1829539/140‑1 (MQ=255) cTTTCGCCTTTTTTTCACCACTCATTGCCACATTCCTTGTGTATAGCCATCCATTTTTTACGGGCACAGCTAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACTTTTCAATTCAAACAAgg < 2:2381248/140‑1 (MQ=255) tCGCCTTTTTTTCACCACTCATTGCCACATTCCTTGTGTATAGCCATCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACTTTTCAATTCAAACAAGGgag > 1:650200/1‑140 (MQ=255) cGCCTTTTTTTCACCACTCATTGCCACATTCCTTGTGTATAGCCATCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACTTTTCAATTCAAACAAGGgaga < 1:257383/140‑1 (MQ=255) gCCTTTTTTTCACCACTCATTGCCACATTCCTTGTGTATAGCCATCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACTTTTCAATTCAAACAAGGGAGAt < 1:1134305/140‑1 (MQ=255) cTTTTTTTCACCACTCATTGCCACATTCCTTGTGTATAGCCATCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACTTTTCAATTCAAACAAGGGAGATAg < 2:1297548/140‑1 (MQ=255) tttttttCACCACTCATTGCCACATTCCTTGTGTATAGCCATCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACTTTTCAATTCAAACAAGGGAGATAGc < 1:276814/140‑1 (MQ=255) tttttttCACCACTCATTGCCACATTCCTTGTGTATAGCCATCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACTTTTCAATTCAAACAAGGGAGATAGc < 2:58858/140‑1 (MQ=255) ttttttCACCACTCATTGCCACATTCCTTGTGTATAGCCATCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACTTTTCAATTCAAACAAGGGAGATAGCt < 1:664038/140‑1 (MQ=255) tttttCACCACTCATTGCCACATTCCTTGTGTATAGCCATCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACTTttcaattca > 1:1284023/1‑123 (MQ=255) tttttCACCACTCATTGCCACATTCCTTGTGTATAGCCATCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACTTttcaattca < 2:1284023/123‑1 (MQ=255) ttttCACCACTCATTGCCACATTCCTTGTGTATAGCCATCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACTTTTCAATTCAAACAAGGGAGATAGCTcc > 1:2679660/1‑140 (MQ=255) cTCATTGCCACATTCCTTGTGTATAGCCATCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACTTTTCAATTCAAACAAGGGAGATAGCTCCCTTTTGGCa > 2:1475751/1‑140 (MQ=255) tCATTGCCACATTCCTTGTGTATAGCCATCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACTTTTCAATTCAAACAAGGgaga > 1:1269950/1‑123 (MQ=255) tCATTGCCACATTCCTTGTGTATAGCCATCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACTTTTCAATTCAAACAAGGGAGATAGCTCCCTTTTGGCAt > 1:1643632/1‑140 (MQ=255) tCATTGCCACATTCCTTGTGTATAGCCATCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACTTTTCAATTCAAACAAGGGAGATAGCTCCCTTTTGGCAt > 2:1471028/1‑140 (MQ=255) aTTGCCACATTCCTTGTGTATAGCCATCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACTTTTCAATTCAAACAAGGGAGATAGCTCCCTTTTGGCATga < 1:1475751/140‑1 (MQ=255) aTTGCCACATTCCTTGTGTATAGCCATCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACTTTTCAATTCAAACAAGGGAGATAGCTCCCTTTTGGCATga > 2:2702126/1‑140 (MQ=255) tGCCACATTCCTTGTGTATAGCCATCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACTTTTCAATTCAAACAAGGGAGATAGCTCCCTTTTGGCATgaag > 2:1008245/1‑140 (MQ=255) tGCCACATTCCTTGTGTATAGCCATCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACTTTTCAATTCAAACAAGGGAGATAGCTCCCTTTTGGCATgaag < 2:2668938/140‑1 (MQ=255) tGCCACATTCCTTGTGTATACCCATCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACTTTTCAATTCAAACAAGGGAGATAGCTCCCTTTTGGCATgaag < 2:1251278/140‑1 (MQ=255) cacaTTCCTTGTGTATAGCCATCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACTTTTCAATTCAAACAAGGGAGATAGCTCCCTTTTGGCATGaagaag < 1:1508144/140‑1 (MQ=255) aTTCCTTGTGTATAGCCATCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACTTTTCAATTCAAACAAGGGAGATAGCTCCCTTTTGGCATGAAGAAGTaa > 1:1696920/1‑140 (MQ=255) aTTCCTTGTGTATAGCCATCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACTTTTCAATTCAAACAAGGGAGATAGCTCCCTTTTGGCATGAAGAAGTaa > 1:1653337/1‑140 (MQ=255) ccTTGTGTATAGCCATCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACTTTTCAATTCAAACAAGGGAGATAGCTCCCTTTTGGCATGAAGAAGTAAAat < 1:1008245/140‑1 (MQ=255) cTTGTGTATAGCCATCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACTTTTCAATTCAAACAAGGGAGATAGCTCCCTTTTGGCATGAAGAAGTAAAatt > 1:1768770/1‑140 (MQ=255) cTTGTGTATAGCCATCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACTTTTCAATTCAAACAAGGGAGATAGCTCCCTTTTGGCATGAAGAAGTAAAatt > 1:1406839/1‑140 (MQ=255) tgtgTATAGCCATCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACTTTTCAATTCAAACAAGGGAGATAGCTCCCTTTTGGCATGAAGAAGTAAAattat > 1:1536674/1‑140 (MQ=255) tgtgTATAGCCATCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACTTTTCAATTCAAACAAGGGAGATAGCTCCCTTTTGGCATGAAGAAGTAAAattat > 1:568921/1‑140 (MQ=255) taGCCATCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACTTTTCAATTCAAACAAGGGAGATAGCTCCCTTTTGGCATGAAGAAGTaa < 1:1694962/128‑1 (MQ=255) taGCCATCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACTTTTCAATTCAAACAAGGGAGATAGCTCCCTTTTGGCATGAAGAAGTaa > 2:1694962/1‑128 (MQ=255) taGCCATCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACTTTTCAATTCAAACAAGGGAGATAGCTCCCTTTTGGCATGAAGAAGTAAAATTAttcttct > 2:353571/1‑140 (MQ=255) taGCCATCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACTTTTCAATTCAAACAAGGGAGATAGCTCCCTTTTGGCATGAAGAAGTAAAATTAttcttct > 2:1372805/1‑140 (MQ=255) taGCCATCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACTTTTCAATTCAAACAAGGGAGATAGCTCCCTTTTGGCATGAAGAAGTAAAATTAttcttct > 1:355818/1‑140 (MQ=255) gccatccaTTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACTTTTCAATTCAAACAAGGGAGATAGCTCCCTTTTGGCATGAAGAAGTAAAATTAttcttcttc > 2:2185727/1‑140 (MQ=255) | GGCCCACTGCCAGCATATTGCAACGCCCAGACGCCAGCGGAAAGCAGTGCTATTGCGCCAAAACCTACAAGACCATAGAACCGCCAGCCTTTCGCCTTTTTTTCACCACTCATTGCCACATTCCTTGTGTATAGCCAGCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACTTTTCAATTCAAACAAGGGAGATAGCTCCCTTTTGGCATGAAGAAGTAAAATTATTCTTCTTC > NC_000913/2336532‑2336804 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |