| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 795,056 | T→C | intergenic (+134/‑33) | acrZ → / → modA | multidrug efflux pump accessory protein AcrZ/molybdate ABC transporter periplasmic binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 795,056 | 0 | T | C | 99.4% | 610.7 / ‑5.1 | 157 | intergenic (+134/‑33) | acrZ/modA | multidrug efflux pump accessory protein AcrZ/molybdate ABC transporter periplasmic binding protein |
| Reads supporting (aligned to +/- strand): ref base T (0/1); new base C (59/96); total (59/98) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.95e-01 | |||||||||||
Only 100 of 157 total aligned reads displayed.
TTGATTCCCTGAATGCCCGCTTAGTCGGGCATTTTCTTTTTCTCAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGTCGCCTACATAACGTTACATTAAGGGGTTACCAATGGCTCGTAAATGGTTGAACTTGTTTGCCGGGGCGGCACTCTCTTTCGCTGTTGCTGGCAATGCACTGGCAGATGAAGGGAAAATCACGGTGTTCGCCGCCG > NC_000913/794919‑795191 | tGATTCCCTGAATGCCCGCTTAGTCGGGCATTTTCTTTTTCTCAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGCCGc < 1:267728/140‑1 (MQ=255) tCCCTGAATGCCCGCTTAGTCGGGCATTTTCTTTTTCTCAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGCCg > 2:2586682/1‑135 (MQ=255) tCCCTGAATGCCCGCTTAGTCGGGCATTTTCTTTTTCTCAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGCCGCCTAc < 2:2097962/140‑1 (MQ=255) tCCCTGAATGCCCGCTTAGTCGGGCATTTTCTTTTTCTCAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGCCGCCTAc > 2:1954829/1‑140 (MQ=255) tCCCTGAATGCCCGCTTAGTCGGGCATTTTCTTTTTCTCAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGCCGCCTAc > 1:95538/1‑140 (MQ=255) cccTGAATGCCCGTTTAGTCGGGCTTTTTTTTTTTCTCAACTTCCTTTTTTTCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGCCGCCTACa < 2:1391180/140‑1 (MQ=255) cccTGAATGCCCGCTTAGTCGGGCATTTTCTTTTTCTCAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGCCGCCTACa < 2:2385514/140‑1 (MQ=255) cccTGAATGCCCGCTTAGTCGGGCATTTTCTTTTTCTCAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGCCGCCTACa > 1:2874465/1‑140 (MQ=255) cccTGAATGCCCGCTTAGTCGGGCATTTTCTTTTTCTCAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGCCGCCTACa < 2:1065059/140‑1 (MQ=255) cccTGAATGCCCGCTTAGTCGGGCATTTTCTTTTTCTCAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGCCGCCTACa > 1:1768610/1‑140 (MQ=255) cccTGAATGCCCGCTTAGTCGGGCATTTTCTTTTTCTCAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGCCGCCTACa < 2:2116217/140‑1 (MQ=255) cccTGAATGCCCGCTTAGTCGGGCATTTTCTTTTTCTCAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGCCGCCTACa < 1:2173728/140‑1 (MQ=255) cccTGAATGCCCGCTTAGTCGGGCATTTTCTTTTTCTAAACTTCTTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGCCGCCTACa < 1:699319/140‑1 (MQ=255) ccTGAATGCCCGCTTAGTCGGGCATTTTCTTTTTCTCAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGCCGc > 2:2675497/1‑134 (MQ=255) ccTGAATGCCCGCTTAGTCGGGCATTTTCTTTTTCTCAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGCCGCCTACAt > 1:1581443/1‑140 (MQ=255) ccTGAATGCCCGCTTAGTCGGGCATTTTCTTTTTCTCAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGCCGCCTACAt > 1:1830466/1‑140 (MQ=255) aaTGCCCGCTTAGTCGGGCATTTTCTTTTTCTCAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGCCGCCTACATAACg < 1:1001964/140‑1 (MQ=255) aaTGCCCGCTTAGTCGGGCATTTTCTTTTTCTCAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGCCGCCTACATAACg < 1:41110/140‑1 (MQ=255) aaTGCCCGCTTAGTCGGGCATTTTCTTTTTCTCAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGCCGCCTACATAACg < 2:1581443/140‑1 (MQ=255) aaTGCCCGCTTAGTCGGGCATTTTCTTTTTCTCAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGCCGCCTACATAACg < 1:1654536/140‑1 (MQ=255) aTGCCCGCTTAGTCGGGCATTTTCTTTTTCTCAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGCCGCCTACATAACGt < 1:1986933/140‑1 (MQ=255) aTGCCCGCTTAGTCGGGCATTTTCTTTTTCTCAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGCCGCCTACATAACGt < 1:1944380/140‑1 (MQ=255) aTGCCCGCTTAGTCGGGCATTTTCTTTTTCTCAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGCCGCCTACATAACGt < 1:615841/140‑1 (MQ=255) aTGCCCGCTTAGTCGGGCATTTTCTTTTTCTCAACTTCCTGC‑TTTCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGCCGCCTACATAACGtt < 2:2753506/140‑1 (MQ=255) tGCCCGCTTAGTCGGGCATTTTCTTTTTCTCAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGCCGCCTACATAACGtt > 1:913543/1‑140 (MQ=255) tGCCCGCTTAGTCGGGCATTTTCTTTTTCTCAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGCCGCCTACATAACGtt < 1:1400415/140‑1 (MQ=255) tGCCCGCTTAGTCGGGCATTTTCTTTTTCTCAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGCCGCCTACATAACGtt < 2:235763/140‑1 (MQ=255) tGCCCGCTTAGTCGGGCATTTTCTTTTTCTCAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGCCGCCTACATAACGtt < 1:1761668/140‑1 (MQ=255) tGCCCGCTTAGTCGGGCATTTTCTTTTTCTCAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGCCGCCTACATAACGtt < 1:1684913/140‑1 (MQ=255) ccGCTTAGTCGGGCATTTTCTTTTTCTCAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGCCGCCTACATAACGTTACa > 2:2484555/1‑140 (MQ=255) cGCTTAGTCGGGCATTTTCTTTTTCTCAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGCCGCCTACATAACGTTACAt > 2:902713/1‑140 (MQ=255) gCTTAGTCGGGCTTTTTCTTTTTCTCAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGCCGCCTACATAACGTTACAtt < 2:472043/140‑1 (MQ=255) gCTTAGTCGGGCATTTTCTTTTTCTCAGCTCCCTTCTTTTCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGCCGCCTACATAACGTTACAtt < 2:676618/140‑1 (MQ=255) gCTTAGTCGGGCATTTTCTTTTTCTCAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGCCGCCTACATAACGTTACAtt > 1:253918/1‑140 (MQ=255) gCTTAGTCGGGCATTTTCTTTTTCTCAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGACGCCTACATAACGTTACAtt < 2:332714/140‑1 (MQ=255) cTTAGTCGGGCATTTTCTTTTTCTCAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGCCGCCTACATAACGt < 1:295353/133‑1 (MQ=255) ttcgTCGGGTATTTTCTTTTTCACAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGCCGCCTACATAACGTTACATTaa < 2:704102/137‑1 (MQ=255) ttAGTCGGGCATTTTCTTTTTCTCAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGCCGCCTACATAACGTTACATTaa < 2:1017805/140‑1 (MQ=255) tAGTCGGGCATTTTCTTTTTCTCAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGCCGCCTACATAACGTTACATTAAg < 2:1830466/140‑1 (MQ=255) tAGTCGGGCATTTTCTTTTTCTCAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGCCGCCTACATAACGTTACATTAAg > 1:1606040/1‑140 (MQ=255) tAGTCGGGCATTTTCTTTTTCTCAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCATTATATTGCCGCCTACATAACGTTACATTAAg < 1:1138141/140‑1 (MQ=255) gTCGGGCTTTTTCTTTTTCTCAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGCCGCCTACATAACGTTACATTAAggg < 2:2229305/140‑1 (MQ=255) gTCGGGCATTTTCTTTTTCTCAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGCCGCCTACATAACGTTACATTAAggg < 2:1709519/140‑1 (MQ=255) gCATTTTCTTTTTCTCAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGCCGCCTACATAACGTTACATTAAGGGGTTAc > 2:955689/1‑140 (MQ=255) cATTTTCTTTTTCTCAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGCCGCCTACATAACGTTACATTAAGGGGTTAcc > 2:2619475/1‑140 (MQ=255) tttttttttttctCAACTCCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGCCGCCTACATAACGTTACATTAAGGGGTTACCa < 2:1136061/139‑1 (MQ=255) ttttctttttctCAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGCCGCCTACATAACGTTACATTAAGGGGTTACCaa < 2:95538/140‑1 (MQ=255) ttttctttttctCAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGCCGCCTACATAACGTTACATTAAGGGGTTACCaa < 1:2343325/140‑1 (MQ=255) tctttttctCAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGCCGCCTACATAACGTTACATTAAg > 2:2014594/1‑127 (MQ=255) tctttttctCAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGCCGCCTACATAACGTTACATTAAg < 1:2014594/127‑1 (MQ=255) tctttttctCAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGCCGCCTACATAACGTTACATTAAGGGGTTACCAATgg < 2:2655001/140‑1 (MQ=255) tttttctCAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGCCGCCTACATAACGTTACATTAAGGGGTTACCAATGGCt < 1:1129334/140‑1 (MQ=255) tctcAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGCCGCCTACATAACGTTACATTAAGGGGTTACCAATGGCTCGTa < 2:2550094/140‑1 (MQ=255) ctcAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGCCGCCTACATAACGTTACATTAAGGGGt > 1:2743935/1‑124 (MQ=255) ctcAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGCCGCCTACATAACGTTACATTAAGGGGTTACCAATGGCTCGTaa < 1:902713/140‑1 (MQ=255) ctcAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGCCGCCTACATAACGTTACATTAAGGGGTTACCAATGGCTCGTaa > 2:233947/1‑140 (MQ=255) cAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGCCGCCTACATAACGTTACATTAAGGGGTTACCAATGGCTCGTAAAt < 2:2307205/140‑1 (MQ=255) ttCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGCCGCCTACATAACGTTACATTAAGGGGTTACCAATGGCTCGTaa > 2:1274748/1‑125 (MQ=255) ttCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGCCGCCTACATAACGTTACATTAAGGGGTTACCAATGGCTCGTaa < 1:1274748/125‑1 (MQ=255) ttCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGCCGCCTACATAACGTTACATTAAGGGGTTACCAATGGCTCGTAAATGGTTGAACTTGtt > 2:396277/1‑140 (MQ=255) cTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGCCGCCTACATAACGTTACATTAAGGGGTTACCAATGGCTCGTAAATGGTTGAACTTGTTTGc > 2:2387444/1‑140 (MQ=255) cTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGCCGCCTACATAACGTTACATTAAGGGGTTACCAATGGCTCGTAAATGGTTGAACTTGTTTGc > 2:2855028/1‑140 (MQ=255) ccGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGCCGCCTACATAACGTTACATTAAGGGGTTACCAATGGCTCGTAAATGGTTGAACTTGTTTGCCgg < 1:237257/140‑1 (MQ=255) cGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGCCGCCTACATAACGTTACATTAAGGGGTTACCAATGGCTCGTAAATGGTTGAACTTGTTTGCCggg > 1:2296115/1‑140 (MQ=255) atTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGCCGCCTACATAACGTTACATTAAGGGGTTACCAATGGCTCGTAAATGGTTGAACTTGTTTGCCGGggcgg < 2:977083/140‑1 (MQ=255) tttttCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGCCGCCTACATAACGTTACATTAAGGGGTTACCAATGGCTCGTAAATGGTTGAACTTGTTTGCCGGGGCGGCa < 1:1007869/140‑1 (MQ=255) tttttCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGCCGCCTACATAACGTTACATTAAGGGGTTACCAATGGCTCGTAAATGGTTGAACTTGTTTGCCGGGGCGGCa < 1:1954829/140‑1 (MQ=255) aTCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGCCGCCAACATAACGTTACATTAAGGGGTTACCAATGGCTCGTAAATGGTTGAACTTGTTTGCCGGGGCGGCACTCTCttt > 1:2776087/1‑140 (MQ=255) tCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGCCGCCTACATAACGTTACATTAAGGGGTTACCAATGGCTCGTAAATGGTTGAACTTGTTTGCCGGGGCGGCACTCTCTTTc > 1:1274338/1‑140 (MQ=255) cTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGCCGCCTACATAACGTTACATTAAGGGGTTACCAATGGTTCGTAAATGGTTGAACTTGTTTGCCGGGGCGGCACTCTCTTTCg < 2:1490356/140‑1 (MQ=255) cTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGCCGCCTACATAACGTTACATTAAGGGGTTACCAATGGCTCGTAAATGGTTGAACTTGTTTGCCGGGGTGGCACTCTCTTTCg < 1:1589908/140‑1 (MQ=255) cTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGCCGCCTACATAACGTTACATTAAGGGGTTACCAATGGCTCGTAAATGGTTGAACTTGTTTGCCGGGGCGGCACTCTCTTTCGCTGt > 1:2304713/1‑140 (MQ=255) tCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGCCGCCTACATAACGTTACATTAAGGGGTTACCAATGGCTCGTAAATGGTTGAACTTGTTTGCCGGGGCGGCACTCTCTTTCGCTGtt < 2:2049668/140‑1 (MQ=255) cacaAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGCCGCCTACATAACGTTACATTAAGGGGTTACCAATGGCTCGTAAATGGTTGAACTTGTTTGCCGGGGCGGCACTCTCTTTCg < 2:2470316/134‑1 (MQ=255) cacaAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGCCGCCTACATAACGTTACATTAAGGGGTTACCAATGGCTCGTAAATGGTTGAACTTGTTTGCCGGGGCGGCACTCTCTTTCg > 1:2470316/1‑134 (MQ=255) cacaAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGCCGCCTACATAACGTTACATTAAGGGGTTACCAATGGCTCGTAAATGGTTGAACTTGTTTGCCGGGGCGGCACTCTCTTTCGCTGTTg > 2:7438/1‑140 (MQ=255) cacaAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGCCGCCTACATAACGTTACATTAAGGGGTTACCAATGGCTCGTAAATGGTTGAACTTGTTTGCCGGGGCGGCACTCTCTTTCGCTGTTg > 1:2884280/1‑140 (MQ=255) ttAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGCCGCCTACATAACGTTACATTAAGGGGTTACCAATGGCTCGTAAATGGTTGAACTTGTTTGCCGGGGCGGCACTCTCTTTCGCTGTTGCTGGCAAt > 2:1769022/1‑140 (MQ=255) ttAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGCCGCCTACATAACGTTACATTAAGGGGTTACCAATGGCTCGTAAATGGTTGAACTTGTTTGCCGGGGCGGCACTCTCTTTCGCTGTTGCTGGCAAt > 2:69628/1‑140 (MQ=255) aGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGCCGCCTACATAACGTTACATTAAGGGGTTACCAATGGCTCGTAAATGGTTGAACTTGTTTGCCGGGGCGGCACTCTCTTTCGCTGTTGc < 1:90600/131‑1 (MQ=255) aGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGCCGCCTACATAACGTTACATTAAGGGGTTACCAATGGCTCGTAAATGGTTGAACTTGTTTGCCGGGGCGGCACTCTCTTTCGCTGTTGCTGGCAATGc > 1:939976/1‑140 (MQ=255) gCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGCCGCCTACATAACGTTACATTAAGGGGTTACCAATGGCTCGTAAATGGTTGAACTTGTTTGCCGGGGCGGCACTCTCTTTCGCt < 1:2636234/125‑1 (MQ=255) gCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGCCGCCTACATAACGTTACATTAAGGGGTTACCAATGGCTCGTAAATGGTTGAACTTGTTTGCCGGGGCGGCACTCTCTTTCGCTGTTGCTGGCAATGCa < 2:913543/140‑1 (MQ=255) gCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGCCGCCTACATAACGTTACATTAAGGGGTTACCAATGGCTCGTAAATGGTTGAACTTGTTTGCCGGGGCGGCACTCTCTTTCGCTGTTGCTGGCAATGCa < 1:251344/140‑1 (MQ=255) gCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGCCGCCTACATAACGTTACATTAAGGGGTTACCAATGGCTCGTAAATGGTTGAACTTGTTTGCCGGGGCGGCACTCTCTTTCGCTGTTGCTGGCAATGCa < 1:396277/140‑1 (MQ=255) gCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGCCGCCTACATAACGTTACATTAAGGGGTTACCAATGGCTCGTAAATGGTTGAACTTGTTTGCCGGGGCGGCACTCTCTTTCGCTGTTGCTGGCAATGCa > 1:611294/1‑140 (MQ=255) gCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGCCGCCTACATAACGTTACATTAAGGGGTTACCAATGGCTCGTAAATGGTTGAACTTGTTTGCCGGGGCGGCACTCTCTTTCGCTGTTGCTGGCAATGCa < 1:2069190/140‑1 (MQ=255) aCTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGCCGCCTACATAACGTTACATTAAGGGGTTACCAATGGCTCGTAAATGGTTGAACTTGTTTGCCGGGGCGGCACTCTCTTTCGCTGTTGCTGGCAATGCACTGGCa > 2:315084/1‑140 (MQ=255) aCTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGCCGCCTACATAACGTTACATTAAGGGGTTACCAATGGCTCGTAAATGGCTTCACCTCTTTGCCGGGGCGGCACTCTCCTTAGCTGTTACTGGCCATTCACTTGCa > 2:923573/1‑140 (MQ=255) ctgGGAAAATTCCGAGTTAGTCGTTATATTGCCGCCTACATAACGTTACATTAAGGGGTTACCAATGGCTCGTAAATGGTTGAACTTGTTTGCCGGGGCGGCACTCTCTTTCGCTGTTGCTGGCAATGCACTGGCAGATg > 2:2282826/1‑140 (MQ=255) tgGGAAAATTCCGAGTTAGTCGTTATATTGCCGCCTACATAACGTTACATTAAGGGGTTACCAATGGCTCGTAAATGGTTGAACTTGTTTGCCGGGGCGGCACTCTCTTTCGCTGTTGCTGGCAATg > 1:1386354/1‑127 (MQ=255) tgGGAAAATTCCGAGTTAGTCGTTATATTGCCGCCTACATAACGTTACATTAAGGGGTTACCAATGGCTCGTAAATGGTTGAACTTGTTTGCCGGGGCGGCACTCTCTTTCGCTGTTGCTGGCAATg < 2:1386354/127‑1 (MQ=255) tgGGAAAATTCCGAGTTAGTCGTTATATTGCCGCCTACATAACGTTACATTAAGGGGTTACCAATGGCTCGTAAATGGTTGAACTTGTTTGCCGGGGCGGCACTCTCTTTCGCTGTTGCTGGCAATGCACTGGCAGATGa > 2:2752764/1‑140 (MQ=255) gggAAAATTCCGAGTTAGTCGTTATATTGCCGCCTACATAACGTTACATTAAGGGGTTACCAATGGCTCGTAAATGGTTGAACTTGTTTGCCGGGGCGGCACTCTCTTTCGCTGTTGCTGGCAATGCACTGGCAGATGaa > 1:2132665/1‑140 (MQ=255) aTTCCGAGTTAGTCGTTATATTGCCGCCTACATAACGTTACATTAAGGGGTTACCAATGGCTCGTAAATGGTTGAACTTGTTTGCCGGGGCGGCACTCTCTTTCGCTGTTGCTGGCAATGCACTGGCAGATGAAGGGaaa > 2:360188/1‑140 (MQ=255) aGTTAGTCGTTATATTGCCGCCTACATAACGTTACATTAAGGGGTTACCAATGGCTCGTAAATGGTTGAACTTGTTTGCCGGGGCGGCACTCTCTTTCGCTGTTGCTGGCAATGCACTGGCAGATGAAGGGAAAATCACg < 1:639308/140‑1 (MQ=255) tataTTGCCGCCTACATAACGTTACATTAAGGGGTTACCAATGGCTCGTAAATGGTTGAACTTGTTTGCCGGGGCGGCACTCTCTTTCGCTGTTGCTGGCAATGCACTGGCAGATGAAGGGAAAATCACGGTGTTcgccg < 2:1274338/140‑1 (MQ=255) atatTGCCGCCTACATAACGTTACATTAAGGGGTTACCAATGGCTCGTAAATGGTTGAACTTGTTTGCCGGGGCGGCACTCTCTTTCGCTGTTGCTGGCAATGCACTGGCAGATGAAGGGAAAATCa < 2:2842677/127‑1 (MQ=255) atatTGCCGCCTACATAACGTTACATTAAGGGGTTACCAATGGCTCGTAAATGGTTGAACTTGTTTGCCGGGGCGGCACTCTCTTTCGCTGTTGCTGGCAATGCACTGGCAGATGAAGGGAAAATCa > 1:2842677/1‑127 (MQ=255) atTGCCGCCTACATAACGTTACATTAAGGGGTTACCAATGGCTCGTAAATGGTTGAACTTGTTTGCCGGGGCGGCACTCTCTTTCGCTGTTGCTGGCAATGCACTGGCAGATGAAGGGAAAATCACGGTGTTcgccgccg < 1:2613116/140‑1 (MQ=255) | TTGATTCCCTGAATGCCCGCTTAGTCGGGCATTTTCTTTTTCTCAACTTCCTGCTTTTCCTGCCGATATTTTTTCTTATCTACCTCACAAAGGTTAGCAATAACTGCTGGGAAAATTCCGAGTTAGTCGTTATATTGTCGCCTACATAACGTTACATTAAGGGGTTACCAATGGCTCGTAAATGGTTGAACTTGTTTGCCGGGGCGGCACTCTCTTTCGCTGTTGCTGGCAATGCACTGGCAGATGAAGGGAAAATCACGGTGTTCGCCGCCG > NC_000913/794919‑795191 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |