Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 2,326,450 | 0 | T | G | 20.7% | 194.5 / 38.3 | 82 | G114G (GGT→GGG) | atoB | acetyl‑CoA acetyltransferase |
Reads supporting (aligned to +/- strand): ref base T (3/62); new base G (17/0); total (20/62) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 7.04e-15 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Rejected as consensus: Frequency below/above cutoff threshold. |
Only 100 of 110 total aligned reads displayed.
CTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTA‑TGGAAAATATGAGTTTAGCCCCCTACTTACTCGATGCAAAAGCACGCTCTGGTTATCGTCTTGGAGACGGACAGGTTTATGACGTAATCCTGCGCGATGGCCTGATGTGCGCCACCCATGGTTATCATATGGGGATTA > NC_000913/2326316‑2326589 | cTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTA‑TGGa < 1:1919688/140‑1 (MQ=255) ttAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGGG‑TGGgaaa > 2:1899547/1‑140 (MQ=255) ttAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGGA‑TGGgaaa > 2:349490/1‑140 (MQ=255) aaaaGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTA‑TGGAAAatat < 1:375952/140‑1 (MQ=255) cGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTa < 2:1766761/125‑1 (MQ=255) cGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTA‑TGGAAAATATGAGtt < 1:1361257/140‑1 (MQ=255) ggCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCGTTGTGGCGGGGGGGA‑TGGAAAAGATTAGgttt > 2:375952/1‑139 (MQ=255) ggCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGGA‑TGGAAAAAATGAGGTTa > 2:269157/1‑140 (MQ=255) cTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTA‑TGGAAAATATGAGTTTAGc < 1:1600355/140‑1 (MQ=255) tGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTA‑TGGAAAATATGAGTTTAGcc < 2:1457932/140‑1 (MQ=255) tGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTA‑TGGAAAATATGAGTTTAGcc < 1:1899547/140‑1 (MQ=255) tGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTA‑TGGAAAATATGAGTTTAGcc < 1:1843216/140‑1 (MQ=255) tGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTA‑TGGAAAATATGAGTTTAGcc < 2:16643/140‑1 (MQ=255) ggCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTA‑TGGAAAATATGAGTTTAGccc < 1:1606534/140‑1 (MQ=255) ggCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTA‑TGGAAAATATGAGTTTAGccc < 1:837104/140‑1 (MQ=255) ggCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTA‑TGGAAAATATGAGTTTAGccc < 2:508720/140‑1 (MQ=255) ggCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTA‑TGGAAAATATGAGTTTAGccc < 1:51628/140‑1 (MQ=255) gCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCGGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTA‑TGGAAAATATGAGTTTAGcccc < 2:193672/140‑1 (MQ=255) gCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGGG‑TGGGAAAAATGAGTTTAGcccc > 2:1547348/1‑140 (MQ=255) gCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGGA‑TGGAAAATATGAGTTTAGcccc > 1:716432/1‑140 (MQ=255) gtgtGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTA‑TGGAAAATATGAGTTTAGCCCCCtacttact < 1:1101798/140‑1 (MQ=255) tgtgCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTA‑TGGGAAAAATGAGTTTAGCCCCCCACTTACTc > 1:972320/1‑140 (MQ=255) tgtgCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGGG‑TGGGAAAAATGAGTTTAGGCCCCCCCTTACTc > 2:1404759/1‑140 (MQ=255) tgtgCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGGA‑TGGAAAATATGAGTTTAGCCCCCTACTTACTc > 1:1712871/1‑140 (MQ=255) tgtgCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGGA‑TGGAAAAAATGAGGTTAGCCCCCCACTTACTc > 2:1521125/1‑140 (MQ=255) tgCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGGA‑TGGAAAATATGAGTTTAGCCCCCTACATAATCGa > 1:915248/1‑140 (MQ=255) cGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGGA‑TGGAAAAAATGAGGTTAGCCCCCCACTTACTCGATg > 2:1130107/1‑140 (MQ=255) ttCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGGA‑TGGAAAATATGAGTTTAGCCCCCTACTTACTCGATGCaaa > 1:776087/1‑140 (MQ=255) cACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTA‑TGGAAAATATGAGTTTAGCCCCCTACTTACTCGATGCAAAAg > 1:161211/1‑140 (MQ=255) cACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTA‑TGGAAAATATGAGTTTAGCCCCCTACTTACTCGATGCAAAAg < 2:342065/140‑1 (MQ=255) cACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGGA‑TGGAAAAAATTAGATTAGCCCCCCACTTTCTCGATGCaaaaa > 2:515739/1‑139 (MQ=255) cACGCTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTA‑TGGAAAATATGAGTTTAGCCCCCTACTTACTCGATGCAAAAg < 1:1723194/140‑1 (MQ=255) cGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTA‑TGGAAAATATGAGTTTAGCCCCCTACTTACTCGATGCAAAAGCa < 1:1547348/140‑1 (MQ=255) cGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTA‑TGGAAAATATGAGTTTAGCCCCCTACTTACTCGATGCAAAAGCa < 2:1558318/140‑1 (MQ=255) cGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGGGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGGA‑GGGAAAAAGTTCATTTTGCCCCCTCCCTACCCGGAGGAAAAGCa > 2:409068/1‑140 (MQ=255) ggTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTA‑TGGAAAATATGAGTTTAGCCCCCTACTTACTCGATGCAAAAGCAc < 1:1933411/140‑1 (MQ=255) cAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTA‑TGGAAAATATGAGTTTAGCCCCCTACTTACTCGATGCAAAAGCACGct < 1:674021/140‑1 (MQ=255) tAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTA‑TGGAAAATATGAGTTTAGCCCCCTACTTACTCGATGCAAAAGCACGCTCTg > 1:817810/1‑140 (MQ=255) gTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTA‑TGGAAAATATGAGTTTAGCGCCCTACTTACTCGATGCAAAAGCACGCTCTGGTTa < 1:1424774/140‑1 (MQ=255) gTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTA‑TGGAAAATATGAGTTTAGCCCCCTACTTACTCGATGCAAAAGCACGCTCTGGTTa < 1:1850737/140‑1 (MQ=255) gTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTA‑TGGAAAATATGAGTTTAGCCCCCTACTTACTCGATGCAAAAGCACGCTCTGGTTa < 1:1555253/140‑1 (MQ=255) aTGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGGA‑TGGAAAAAATGAGTTTAGCCCCCTACTTACTCGATGCAAAAGCACGCTCTGGTTATc > 1:516878/1‑140 (MQ=255) tgtgGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTA‑TGGGAAAAATTAGTTTAGCCCCCCACTTACTCGATGCAAAAGCACGCTCTGGGTATct > 2:890387/1‑139 (MQ=255) gtgGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTA‑TGGAAAATATGAGTTTAGCCCCCTACTTACTCGATGCAAAAGCACGCTCTGGTTATCGt < 1:1404759/140‑1 (MQ=255) gtgGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGGA‑TTGGAAATATACAATTTGCGGCCTACTTACTCGATGCAAAAGAAAGCGCTGGTTATCGt > 2:1424774/1‑140 (MQ=255) gtgGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGGA‑TGGAAAATATGAGGTTAGCCCCCCTCCTACTCGATGCCAAAACACGCTCTGGTTATCGt > 2:1738531/1‑140 (MQ=255) gtgGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGGA‑TGGAAAAAATGAGTTTAGCCCCCCACCTTCTCGCTGCAAAAGCACGCCCTGGGTATCGt > 2:694224/1‑140 (MQ=255) gtgGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGGA‑GGGAAAAAATGAGATTAGCCCCCCACTTACTCCATGCCAAAACACGCCCTGGGTTTCgc > 2:1850737/1‑139 (MQ=255) ggTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGGG‑TGGTAAATATGGGATTGGTCCCCTAATTTCTCGCTGGAAAAGCAGGATCTGTTTATCGTCt > 2:1584689/1‑140 (MQ=255) ggTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGGG‑TGGAAAAAATGAGTTTTGACCCCCACTTTCTCGATGCAAAAACACGCTCTGGGTTTCGTCt > 2:170155/1‑140 (MQ=255) ggTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGGA‑TGGGAAAAATGAGTTTAGCCCCCTACTTACTCGATGCAAAAGCACGCTCTGGTTATCGTCt > 1:1490462/1‑140 (MQ=255) ggTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGGA‑GGGAAAAAATGAGGTTAGCCCCCCACTTACTCGAGGCAAAAGGACGCTCTGGTTATCGTCt > 2:548985/1‑140 (MQ=255) ttCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGGA‑TGGAAAATATGAGTTTAGCCCCCTACTTTCTCCATGCAAAAACACGCCCTGGTTATCGTCTTg > 1:1318316/1‑140 (MQ=255) tCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGGA‑TGGGAAAAATGAGTTTAGCCCCCTACTTACTCGAAGCAAAAGCAAGCCCTGGTTATTGTCTTgg > 1:1793291/1‑140 (MQ=255) gggTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTA‑TGGAAAATATGAGTTTAGCCCCCTACTTACTCGATGCAAAAGCACGCTCTGGTTATCGTCTTGgag < 1:1091898/140‑1 (MQ=255) gggTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTA‑TGGAAAATATGAGTTTAGCCCCCTACTTACTCGATGCAAAAGCACGCTCTGGTTATCGTCTTGgag < 1:1870403/140‑1 (MQ=255) gggTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTA‑TGGAAAATATGAGTTTAGCCCCCTACTTACTCGATGCAAAAGCACGCTCTGGTTATCGTCTTGgag < 1:1521125/140‑1 (MQ=255) gggTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGGG‑TGGGAAAAATGAGTTTAGCCCCCTCCTTACTTGATGCAAAAAAACACTCTGGTTTTCGTCTTTgag > 2:952484/1‑140 (MQ=255) gggTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGGA‑TGGGAAAAATAAATTTTGTCCCCCCCTTTCTCGATGCAAAAACAACCTCTGGTTATTGTCTTgggg > 2:732169/1‑138 (MQ=255) ttAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTA‑TGGAAAATATGAGTTTAGCCCCCTACTTACTCGATGCAAAAGCACGCTCTGGTTATCGTCTTGGAGACGGa < 2:1109540/140‑1 (MQ=255) ttAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTA‑TGGAAAATATGAGTTTAGCCCCCTACTTACTCGATGCAAAAGCACGCTCTGGTTATCGTCTTGGAGACGGa < 1:1642112/140‑1 (MQ=255) ttAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTA‑TGGAAAATATGAGTTTAGCCCCCTACTTACTCGATGCAAAAGCACGCTCTGGTTATCGTCTTGGAGACGGa < 1:694224/140‑1 (MQ=255) ttAAAAGTGTGGCGCTTACCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTA‑TGGAAAATATGAGTTTAGCCCCCTACTTACTCGATGCAAAAGCACGCTCTGGTTATCGTCTTGGAGACGGa < 2:642776/140‑1 (MQ=255) tAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTA‑TGGAAAATATGAGTTTAGCCCCCTACTTACTCGATGCAAAAGCACGCTCTGGTTATCGTCTTGGAGACGGAc < 1:1742873/140‑1 (MQ=255) aaaaGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGGA‑TGGGAAAAATGAGGTTAGCCCCCTACTTTCTCGATGCAAAAACACGCTCTGGTTATCGTCTTGGGGACGGACa > 2:508242/1‑140 (MQ=255) tgtgGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGGA‑TGGAAAAAATGAGTTTAGCCCCCTACTTACTCGATGCAAAAACACGCTCTGGGTATCGTCTTGGAGACGGACAGGgtt > 2:361457/1‑140 (MQ=255) gtgGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTA‑TGGAAAATATGAGTTTAGCCCCCTACTTACTCGATGCAAAAGCACGCTCTGGTTATCGTCTTGGAGACGGACAGGTTTa < 2:776087/140‑1 (MQ=255) gtgGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTA‑TGGAAAATATGAGTTTAGCCCCCTACTTACTCGATGCAAAAGCACGCTCTGGTTATCGTCTTGGAGACGGACAGGTTTa < 2:716432/140‑1 (MQ=255) gtgGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTA‑TGGAAAATATGAGTTTAGCCCCCTACTTACTCGATGCAAAAGCACGCTCTGGTTATCGTCTTGGAGACGGACAGGTTTa < 1:515739/140‑1 (MQ=255) tgGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGGA‑TGGAAAATATGAGTTTAGCCCCCTACTTACTCGATGCAAAAGCACGCTCTGGTTATCGTCTTGGAGACGGACAGGTTTAt > 1:1397401/1‑140 (MQ=255) ggCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGGA‑TGGGAAATATGAGTTTTGTCCCCTACTTATTCGATGCAAAAGAACGCTCTGGTTATCGTCTTTGAGACGGACAGGGTTAtt > 2:539933/1‑139 (MQ=255) cgcTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGGG‑TGGAAAATATGAGTTTAGCCCCCCACTTTCTCGATGCAAAAGCACGCTCTGGTTTTCGTCTTGGGGGCCGACAGGGTTTTGAc > 2:1665803/1‑140 (MQ=255) ccAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTA‑TGGAAAATATGAGTTTAGCCCCCTACTTACTCGATGCAAAAGCACGCTCTGGTTATCGTCTTGGAGACGGACAGGTTTATGACGTAATCCTgc < 1:1081811/140‑1 (MQ=255) ggCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTA‑TGGAAAATATGAGTTTAGCCCCCTACTTACTCGATGCAAAAGCACGCTCTGGTTATCGTCTTGGAGACGGACAGGTTTATGACGTAATCCTGcgcg < 1:1584689/140‑1 (MQ=255) ggCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTA‑TGGAAAATATGAGTTTAGCCCCCTACTTACTCGATGCAAAAGCACGCTCTGGTTATCGTCTTGGAGACGGACAGGTTTATGACGTAATCCTGcgcg < 1:360996/140‑1 (MQ=255) ggCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTA‑TGGAAAATATGAGTTTAGCCCCCTACTTACTCGATGCAAAAGCACGCTCTGGTTATCGTCTTGGAGACGGACAGGTTTATGACGTAATCCTGcgcg < 1:952484/140‑1 (MQ=255) ttCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTA‑TGGAAAATATGAGTTTAGCCCCCTACTTACTCGATGCAAAAGCACGCTCTGGTTATCGTCTTGGAGACGGACAGGTTTATGACGTAATCCTGCGCGATGGc < 2:1766122/140‑1 (MQ=255) ttCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGGG‑TGGGAAAAATGAGTTTAGCCCCCCACTTACTCGATGCAAAAACACGCTCTGGTTATCGTCTTTGGGACGGACAGGGTTATTACGTAATCCTGCGCGGTggg > 2:463767/1‑139 (MQ=255) gcaggTCAGGCGCAGAGCATTGTGGCGGGGGGTA‑TGGAAAATATGAGTTTAGCCCCCTACTTACTCGATGCAAAAGCACGCTCTGGTTATCGTCTTGGAGACGGACAGGTTTATGACGTAATCCTGCGCGATGGCCTGAt < 2:1379667/140‑1 (MQ=255) caggTCAGGCGCAGAGCATTGTGGCGGGGGGGG‑TGGAAAATATGAGTTTAGCCCCCCACTTACTCGATGCAAAAGCACGCCCTGGGTATTGTCTTGGGGACGGACAGGGTTTTGACGTAATCCCGCGCGATGGCCCGAtg > 2:524986/1‑140 (MQ=255) ggTCAGGCGCAGAGCATTGTGGCGGGGGGTA‑TGGAAAATATGAGTTTAGCCCCCTACTTACTCGATGCAAAAGCACGCTCTGGTTATCGTCTTGGAGACGGACAGGTTTATGACGTAATCCTGCGCGATGGCCTGAtgtg < 2:1793291/140‑1 (MQ=255) gTCAGGCGCAGAGCATTGTGGCGGGGGGTA‑TGGAAAATATGAGTTTAGCCCCCTACTTACTCGATGCAAAAGCACGCTCTGGTTATCGTCTTGGAGACGGACAGGTTTATGACGTAATCCTGCGCGATGGCCTGATGTgc < 1:1867780/140‑1 (MQ=255) gTCAGGCGCAGAGCATTGTGGCGGGGGGGATTGGAAAAAAT‑AGGTTTGCCCCCCACTTTCTTGATGCAAAAGGAAGCTCTGGGTATTGTCTTGGGGACGGACCGGGTTTTTACGTAAAACTGCGCGATGGCCTGATGTgc > 2:1364020/1‑140 (MQ=255) tCAGGCGCAGAGCATTGTGGCGGGGGGTA‑TGGAAAATATGAGTTTAGCCCCCTACTTACTCGATGCAAAAGCACGCTCTGGTTATCGTCTTGGAGACGGACAGGTTTATGACGTAATCCTGCGCGATGGCCTGATGTgcg < 1:56389/140‑1 (MQ=255) tCAGGCGCAGAGCATTGTGGCGGGGGGTA‑TGGAAAATATGAGTTTAGCCCCCTACTTACTCGATGCAAAAGCACGCTCTGGTTATCGTCTTGGAGACGGACAGGTTTATGACGTAATCCTGCGCGATGGCCTGATGTgcg < 1:463767/140‑1 (MQ=255) tCAGGCGCAGAGCATTGTGGCGGGGGGTA‑TGGAAAATATGAGTTTAGCCCCCTACTTACTCGATGCAAAAGCACGCTCTGGTTATCGTCTTGGAGACGGACAGGTTTATGACGTAATCCTGCGCGATGGCCTGATGTgcg < 1:170155/140‑1 (MQ=255) tCAGGCGCAGAGCATTGTGGCGGGGGGTA‑TGGAAAATATGAGTTTAGCCCCCTACTTACTCGATGCAAAAGCACGCTCTGGTTATCGTCTTGGAGACGGACAGGTTTATGACGTAATCCTGCGCGATGGCCTGATGTgcg < 2:1455156/140‑1 (MQ=255) gcAGAGCATTGTGGCGGGGGGTA‑TGGAAAATATGAGTTTAGCCCCCTACTTACTCGATGCAAAAGCACGCTCTGGTTATCGTCTTGGAGACGGACAGGTTTATGACGTAATCCTGCGCGATGGCCTGATGTGCGCCAccc < 1:349490/140‑1 (MQ=255) gcAGAGCATTGTGGCGGGGGGTA‑TGGAAAATATGAGTTTAGCCCCCTACTTACTCGATGCAAAAGCACGCTCTGGTTATCGTCTTGGAGACGGACAGGTTTATGACGTAATCCTGCGCGATGGCCTGATGTGCGCCAccc < 2:858957/140‑1 (MQ=255) cAGAGCATTGTGGCGGGGGGTA‑TGGAAAATATGAGTTTAGCCCCCTACTTACTCGATGCAAAAGCACGCTCTGGTTATCGTCTTGGAGACGGACAGGTTTATGACGTAATCCTGCGCGATGGCCTGATGTGCGCCACCCa < 2:1397401/140‑1 (MQ=255) cAGAGCATTGTGGCGGGGGGTA‑TGGAAAATATGAGTTTAGCCCCCTACTTACTCGATGCAAAAGCACGCTCTGGTTATCGTCTTGGAGACGGACAGGTTTATGACGTAATCCTGCGCGATGGCCTGATGTGCGCCACCCa < 1:1925791/140‑1 (MQ=255) cAGAGCATTGTGGCGGGGGGTA‑TGGAAAATATGAGTTTAGCCCCCTACTTACTCGATGCAAAAGCACGCTCTGGTTATCGTCTTGGAGACGGACAGGTTTATGACGTAATCCTGCGCGATGGCCTGATGTGCGCCACCCa < 1:440323/140‑1 (MQ=255) cAGAGCATTGTGGCGGGGGGTA‑TGGAAAATATGAGTTTAGCCCCCTACTTACTCGATGCAAAAGCACGCTCTGGTTATCGTCTTGGAGACGGACAGGTTTATGACGTAATCCTGCGCGATGGCCTGATGTGCGCCACCCa < 1:508242/140‑1 (MQ=255) agCATTGTGGCGGGGGGTA‑TGGAAAATATGAGTTTAGCCCCCTACTTACTCGATGCAAAAGCACGCTCTGGTTATCGTCTTGGAGACGGACAGGTTTATGACGTAATCCTGCGCGATGGCCTGATGTGCGCCACCCATgg < 2:817810/140‑1 (MQ=255) agCATTGTGGCGGGGGGTA‑TGGAAAATATGAGTTTAGCCCCCTACTTACTCGATGCAAAAGCACGCTCTGGTTATCGTCTTGGAGACGGACAGGTTTATGACGTAATCCTGCGCGATGGCCTGATGTGCGCCACCCATgg < 2:161211/140‑1 (MQ=255) cATTGTGGCGGGGGGTA‑TGGAAAATATGAGTTTAGCCCCCTACTTACTCGATGCAAAAGCACGCTCTGGTTATCGTCTTGGAGACGGACAGGTTTATGACGTAATCCTGCGCGATGGCCTGATGTGCGCCACCCATGGtt < 1:524986/140‑1 (MQ=255) ttGTGGCGGGGGGGA‑TGGAAAATATGAGGTTAGCCCCCTACTTACTCGATGCAAAAGCACGCTCTGGTTATCGTCTTGGAGACGGACAGGTTTATGACGTAATCCTGCGCGATGGCCTGATGTGCGCCCCCCATGGTTAt > 2:959735/1‑140 (MQ=255) cGGGGGGGA‑TGGAAAAAATGAGTTTAGCCCCCCACTTACTCGATGCAAAAGCACGCTCTGGGTATCGTCTTGGAGACGGACAGGGTTATGACGTAATCCTGCGCGGTGGCCTGATGGGTGCCCCCCATGGTTATCatatt > 2:1673482/1‑139 (MQ=255) ggggggT‑‑TGGAAAAAATGAGTTTAGGCCCCCCCTTTTTCGATGGAAAAACACGCCCTGGTTATCGTCTTGGAGACCGACAGGGTTATGACGTAATCCCCCGCGATGGCCCGGTGTGCGCCACCCATGGGTTTCATATggg > 2:170191/1‑140 (MQ=255) tA‑TGGAAAATATGAGTTTAGCCCCCTACTTACTCGATGCAAAAGCACGCTCTGGTTATCGTCTTGGAGACGGACAGGTTTATGACGTAATCCTGCGCGATGGCCTGATGTGCGCCACCCATGGTTATCATATGGGGATTa > 2:1164868/1‑140 (MQ=255) | CTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTA‑TGGAAAATATGAGTTTAGCCCCCTACTTACTCGATGCAAAAGCACGCTCTGGTTATCGTCTTGGAGACGGACAGGTTTATGACGTAATCCTGCGCGATGGCCTGATGTGCGCCACCCATGGTTATCATATGGGGATTA > NC_000913/2326316‑2326589 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |