BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,883,898	G→T	Q81K (CAA→AAA)	casA ←	type I‑E CRISPR system Cascade subunit CasA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,883,898	0	G	T	100.0%	523.3 / NA	147	Q81K (CAA→AAA)	casA	type I‑E CRISPR system Cascade subunit CasA
Reads supporting (aligned to +/- strand): ref base G (0/0); new base T (88/59); total (88/59)

Only 100 of 152 total aligned reads displayed.

TTCGTCGCGCCGCTTACCCCAGCCAACAGTTTTTCCATTGGAGTCACATCATTTGCTTTGACACCTTTGGTCTGCATAAAGGGATGTTCTGCGTGATTAAGGTAGAACATATCTATCCACGGCGCGATGAGTTGTTGAAACTCATCTTCAGTGAGCGGATTCATTATGCGATGTCGAAATTCAACGTCATCTTTTGCCGGGGCGATAATTTGCCCAATGCAAACCAGCAGTGCTAAAGCGGCCAGTTCCATATCGTCACGGGGCAAACTTAAT  >  NC_000913/2883762‑2884034

  cgtcgCGCCGCTTACCCCAGCCAACAGTTTTTCCATTGGAGTCACATCATTTGCTTTGACACCTTTGGTCTGCATAAAGGGATGTTCTGCGTGATTAAGGTAGAACATATCTATCCACGGCGCGATGAGTTGTTTAAACt                                                                                                                                     <  1:1611177/140‑1 (MQ=255)

   gtcgCGCCGCTTACCCCAGCCAACAGTTTTTCCATTGGAGTCACATCATTTGCTTTGACACCTTTGGTCTGCATAAAGGGATGTTCTGCGTGATTAAGGTAGAACATATCTATCCACGGCGCGATGAGTTGTTTAAACTc                                                                                                                                    >  1:642915/1‑140 (MQ=255)

   gtcgCGCCGCTTACCCCAGCCAACAGTTTTTCCATTGGAGTCACATCATTTGCTTTGACACCTTTGGTCTGCATAAAGGGATGTTCTGCGTGATTAAGGTAGAACATATCTATCCACGGCGCGATGAGTTGTTTAAACTc                                                                                                                                    >  2:824160/1‑140 (MQ=255)

     cgcgCCGCTTACCCCAGCCAACAGTTTTTCCATTGGAGTCACATCATTTGCTTTGACACCTTTGGTCTGCATAAAGGGATGTTCTGCGTGATTAAGGTAGAACATATCTATCCACGGCGCGATGAGTTGTTTAAACTCAt                                                                                                                                  <  2:650442/140‑1 (MQ=255)

        gccgcTTACCCCAGCCAACAGTTTTTCCATTGGAGTCACATCATTTGCTTTGACACCTTTGGTCTGCATAAAGGGATGTTCTGCGTGATTAAGGTAGAACATATCTATCCACGGCGCGATGAGTTGTTTAAACTCATCtt                                                                                                                               <  1:1907488/140‑1 (MQ=255)

          cgcTTACCCCAGCCAACAGTTTTTCCATTGGAGTCACATCATTTGCTTTGACACCTTTGGTCTGCATAAAGGGATGTTCTGCGTGATTAAGGTAGAACATATCTATCCACGGCGCGATGAGTTGTTTAAACTCATCTTCa                                                                                                                             >  1:1474552/1‑140 (MQ=255)

               aCCCCAGCCAACAGTTTTTCCATTGGAGTCACATCATTTGCTTTGACACCTTTGGTCTGCATAAAGGGATGTTCTGCGTGATTAAGGTAGAACATATCTATCCACGGCGCGATGAGTTGTTTAAACTCATCTTCAGTGAg                                                                                                                        <  2:1575522/140‑1 (MQ=255)

               aCCCCAGCCAACAGTTTTTCCATTGGAGTCACATCATTTGCTTTGACACCTTTGGTCTGCATAAAGGGATGTTCTGCGTGATTAAGGTAGAACATATCTATCCACGGCGCGATGAGTTGTTTAAACTCATCTTCAGTGAg                                                                                                                        <  1:1332770/140‑1 (MQ=255)

                 cccAGCCAACAGTTTTTCCATTGGAGTCACATCATTTGCTTTGACACCTTTGGTCTGCATAAAGGGATGTTCTGCGTGATTAAGGTAGAACATATCTATCCACGGCGCGATGAGTTGTTTAAACTCATCTTCAGTGAGCg                                                                                                                      <  2:78171/140‑1 (MQ=255)

                  ccAGCCAACAGTTTTTCCATTGGAGTCACATCATTTGCTTTGACACCTTTGGTCTGCATAAAGGGATGTTCTGCGTGATTAAGGTAGAACATATCTATCCACGGCGCGATGAGTTGTTTAAACTCATCTTCAGTGAGCgg                                                                                                                     <  1:448812/140‑1 (MQ=255)

                   cAGCCAACAGTTTTTCCATTGGAGTCACATCATTTGCTTTGACACCTTTGGTCTGCATAAAGGGATGTTCTGCGTGATTAAGGTAGAACATATCTATCCACGGCGCGATGAGTTGTTTAAACTCATCTTCAGTGAGCGGa                                                                                                                    <  1:962516/140‑1 (MQ=255)

                   cAGCCAACAGTTTTTCCATTGGAGTCACATCATTTGCTTTGACACCTATGGTCTGCATAAAGGGATGTTCTGCGTGATTAAGGTAGAACATATCTATCCACGGCGCGATGAGTTGTTTAAACTCATCTTCAGTGAGCGGa                                                                                                                    <  1:182855/140‑1 (MQ=255)

                    aGCCAACAGTTTTTCCATTGGAGTCACATCATTTGCTTTGACACCTTTGGTCTGCATAAAGGGATGTTCTGCGTGATTAAGGTAGAACATATCTATCCACGGCGCGATGAGTTGTTTAAACTCATCTTCAGTGAg                                                                                                                        <  1:1490490/135‑1 (MQ=255)

                    aGCCAACAGTTTTTCCATTGGAGTCACATCATTTGCTTTGACACCTTTGGTCTGCATAAAGGGATGTTCTGCGTGATTAAGGTAGAACATATCTATCCACGGCGCGATGAGTTGTTTAAACTCATCTTCAGTGAGCGGAt                                                                                                                   <  1:1592696/140‑1 (MQ=255)

                    aGCCAACAGTTTTTCCATTGGAGTCACATCATTTGCTTTGACACCTTTGGTCTGCATAAAGGGATGTTCTGCGTGATTAAGGTAGAACATATCTATCCACGGCGCGATGAGTTGTTTAAACTCATCTTCAGTGAGCGGAt                                                                                                                   <  1:515828/140‑1 (MQ=255)

                    aGCCAACAGTTTTTCCATTGGAGTCACATCATTTGCTTTGACACCTTTGGTCTGCATAAAGGGATGTTCTGCGTGATTAAGGTAGAACATATCTATCCACGGCGCGATGAGTTGTTTAAACTCATCTTCAGTGAGCGGAt                                                                                                                   <  1:1281651/140‑1 (MQ=255)

                    aGCCAACAGTTTTTCCATTGGAGTCACATCATTTGCTTTGACACCTTTGGTCTGCATAAAGGGATGTTCTGCGTGATTAAGGTAGAACATATCTATCCACGGCGCGATGAGTTGTTTAAACTCATCTTCAGTGAGCGGAt                                                                                                                   <  1:1104570/140‑1 (MQ=255)

                    aGCCAACAGTTTTTCCATTGGAGTCACATCATTTGCTTTGACACCTTTGGTCTGCATAAAGGGATGTTCTGCGTGATTAAGGTAGAACATATCTATCCACGGCGCGATGAGTTGTTTAAACTCATCTTCAGTGAGCGGAt                                                                                                                   <  1:1275300/140‑1 (MQ=255)

                      ccAACAGTTTTTCCATTGGAGTCACATCATTTGCTTTGACACCTTTGGTCTGCATAAAGGGATGTTCTGCGTGATTAAGGTAGAACATATCTATCCACGGCGCGATGAGTTGTTTAAACTCATCTTCAGTGAGCGGAt                                                                                                                   >  2:181848/1‑138 (MQ=255)

                      ccAACAGTTTTTCCATTGGAGTCACATCATTTGCTTTGACACCTTTGGTCTGCATAAAGGGATGTTCTGCGTGATTAAGGTAGAACATATCTATCCACGGCGCGATGAGTTGTTTAAACTCATCTTCAGTGAGCGGAt                                                                                                                   <  1:181848/138‑1 (MQ=255)

                          cAGTTTTTCCATTGGAGTCACATCATTTGCTTTGACACCTTTGGTCTGCATAAAGGGATGTTCTGCGTGATTAAGGTAGAACATATCTATCCACGGCGCGATGAGTTGTTTAAACTCATCTTCAGTGAGCGGAt                                                                                                                   <  2:1792729/134‑1 (MQ=255)

                          cAGTTTTTCCATTGGAGTCACATCATTTGCTTTGACACCTTTGGTCTGCATAAAGGGATGTTCTGCGTGATTAAGGTAGAACATATCTATCCACGGCGCGATGAGTTGTTTAAACTCATCTTCAGTGAGCGGAt                                                                                                                   >  1:1792729/1‑134 (MQ=255)

                           aGTTTTTCCATTGGAGTCACATCATTTGCTTTGACACCTTTGGTCTGCATAAAGGGATGTTCTGCGTGATTAAGGTAGAACATATCTATCCACGGCGCGATGAGTTGTTTAAACTCATCTTCAGTGAGCGGATTCATTAt                                                                                                            >  1:1549311/1‑140 (MQ=255)

                               tttCCATTGGAGTCACATCATTTGCTTTGCCCCCTTTAGACTGCATAAAGGGATGTTCTGCCTGATTAAGGTAGCACATATCTATTCACGGCGCGACGGATTGTTTAAGCTCACCTTCAGTGGGCGGCTTCATTATTCGa                                                                                                        <  2:1943697/140‑1 (MQ=255)

                               tttCCATTGGAGTCACATCATTTGCTTTGACACCTTTGGTCTGCATAAAGGGATGTTCTGCGTGATTAAGGTAGAACATATCTATCCACGGCGCGATGAGTTGTTTAAACTCATCTTCAGTGAGCGGATTCATTATGCGa                                                                                                        <  2:1474552/140‑1 (MQ=255)

                               tttCCATTGGAGTCACATCATTTGCTTTGACACCTTTGGTCTGCATAAAGGGATGTTCTGCGTGATTAAGGTAGAACATATCTATCCACGGCGCGATGAGTTGTTTAAACTCATCTTCAGTGAGCGGATTCATTATGCGa                                                                                                        <  2:1549311/140‑1 (MQ=255)

                                     ttGGAGTCACATCATTTGCTTTGACACCTTTGGTCTGCATAAAGGGATGTTCTGCGTGATTAAGGTAGAACATATCTATCCACGGCGCGATGAGTTGTTTAAACTCATCTTCAGTGAGCGGATTCATTATGCGATGTCGa                                                                                                  >  1:415833/1‑140 (MQ=255)

                                           tCACATCATTTGCTTTGACACCTTTGGTCTGCATAAAGGGATGTTCTGCGTGATTAAGGTAGAACATATCTATCCACGGCGCGATGAGTTGTTTAAACTCATCTTCAGTGAGCGGATTCATTATGCGATGTCGAAATTCa                                                                                            <  1:1259745/140‑1 (MQ=255)

                                               atcatTTGCTTTGACACCTTTGGTCTGCATAAAGGGATGTTCTGCGTGATTAAGGTAGAACATATCTATCCACGGCGCGATGAGTTGTTTAAACTCATCTTCAGTGAGCGGATTCATTATGCGATGTCGAAATTCAACGt                                                                                        >  2:361963/1‑140 (MQ=255)

                                                  atTTGCTTTGACACCTTTGGTCTGCATAAAGGGATGTTCTGCGTGATTAAGGTAGAACATATCTATCCACGGCGCGATGAGTTGTTTAAACTCATCTTCAGTGAGCGGATTCATTATGCGATGTCGAAATTCAACGTCAt                                                                                     >  2:1726357/1‑140 (MQ=255)

                                                       cTTTGACACCTTTGGTCTGCATAAAGGGATGTTCTGCGTGATTAAGGTAGAACATATCTATCCACGGCGCGATGAGTTGTTTAAACTCATCTTCAGTGAGCGGATTCATTATGCGATGTCGAAATTCAACGTCATCtttt                                                                                >  2:1659615/1‑140 (MQ=255)

                                                         ttGACACCTTTGGTCTGCATAAAGGGATGTTCTGCGTGATTAAGGTAGAACATATCTATCCACGGCGCGATGAGTTGTTTAAACTCATCTTCAGTGAGCGGATTCATTATGCGATGTCGAAATTCAACGTCATCTTTTGc                                                                              >  2:275392/1‑140 (MQ=255)

                                                            acacCTTTGGTCTGCATAAAGGGATGTTCTGCGTGATTAAGGTAGAACATATCTATCCACGGCGCGATGAGTTGTTTAAACTCATCTTCAGTGAGCGGATTCATTATGCGATGTCGAAATTCAACGTCATCTTTTGCCgg                                                                           >  1:616722/1‑140 (MQ=255)

                                                            acacCTTTGGTCTGCATAAAGGGATGTTCTGCGTGATTAAGGTAGAACATATCTATCCACGGCGCGATGAGTTGTTTAAACTCATCTTCAGTGAGCGGATTCATTATGCGATGTCGAAATTCAACGTCATCTTTTGCCgg                                                                           >  1:1218883/1‑140 (MQ=255)

                                                              accaaaggTGTGCATAAAGGGATGTTCTGCGTGATTAAGGTAGAACATATCTATCCACGGCGCGATGAGTTGTTTAAACTCATCTTCAGTGAGCGGATTCATTATGCGATGTCGAAATTCAACGTCATCTTTTGCCgggg                                                                         >  1:1678902/7‑140 (MQ=255)

                                                                 tttGGTCTGCATAAAGGGATGTTCTGCGTGATTAAGGTAGAACATATCTATCCACGGCGCGATGAGTTGTTTAAACTCATCTTCAGTGAGCGGATTCATTATGCGATGTCGAAATTCAACGTCATCTTTTGCCGGGGCGa                                                                      >  1:1787248/1‑140 (MQ=255)

                                                                          cATAAAGGGATGTTCTGCGTGATTAAGGTAGAACATATCTATCCACGGCGCGATGAGTTGTTTAAACTCATCTTCAGTGAGCGGATTCATTATGCGATGTCGAAATTCAACGTCATCTTTTGCCGGGGCGATAATTTGcc                                                             >  1:1880658/1‑140 (MQ=255)

                                                                          cATAAAGGGATGTTCTGCGTGATTAAGGTAGAACATATCTATCCACGGCGCGATGAGTTGTTTAAACTCATCTTCAGTGAGCGGATTCATTATGCGATGTCGAAATTCAACGTCATCTTTTGCCGGGGCGATAATTTGcc                                                             >  2:286307/1‑140 (MQ=255)

                                                                          cATAAAGGGATGTTCTGCGTGATTAAGGTAGAACATATCTATCCACGGCGCGATGAGTTGTTTAAACTCATCTTCAGTGAGCGGATTCATTATGCGATGTCGAAATTCAACGTCATCTTTTGCCGGGGCGATAATTTGcc                                                             >  1:1939682/1‑140 (MQ=255)

                                                                          cATAAAGGGATGTTCTGCGTGATTAAGGTAGAACATATCTATCCACGGCGCGATGAGTTGTTTAAACTCATCTTCAGTGAGCGGATTCATTATGCGATGTCGAAATTCAACGTCATCTTTTGCCGGGGCGATAATTTGcc                                                             >  1:1560308/1‑140 (MQ=255)

                                                                          cATAAAGGGATGTTCTGCGTGATTAAGGTAGAACATATCTATCCACGGCGCGATGAGTTGTTTAAACTCATCTTCAGTGAGCGGATTCATTATGCGATGTCGAAATTCAACGTCATCTTTTGCCGGGGCGATAATTTGcc                                                             <  1:954491/140‑1 (MQ=255)

                                                                          cATAAAGGGATGTTCTGCGTGATTAAGGTAGAACATATCTATCCACGGCGCGATGAGTTGTTTAAACTCATCTTCAGTGAGCGGATTCATTATGCGATGTCGAAATTCAACGTCATCTTTTGCCGGGGCGATAATTTGcc                                                             <  1:1403300/140‑1 (MQ=255)

                                                                          cATAAAGGGATGTTCTGCGTGATTAAGGTAGAACATATCTATCCACGGCGCGATGAGTTGTTTAAACTCATCTTCAGTGAGCGGATTCATTATGCGATGTCGAAATTCAACGTCATCTTTTGCCGGGGCGATAATTTGcc                                                             <  1:1016151/140‑1 (MQ=255)

                                                                             aaaGGGATGTTCTGCGTGATTAAGGTAGAACATATCTATCCACGGCGCGATGAGTTGTTTAAACTCATCTTCAGTGAGCGGATTCATTATGCGATGTCGAAATTCAACGTCATCTTTTGCCGGGGCGATAATTTGCCCaa                                                          <  2:1678902/140‑1 (MQ=255)

                                                                             aaaGGGATGTTCTGCGTGATTAAGGTAGAACATATCTATCCACGGCGCGATGAGTTGTTTAAACTCATCTTCAGTGAGCGGATTCATTATGCGATGTCGAAATTCAACGTCATCTTTTGCCGGGGCGATAATTTGCCCaa                                                          <  2:103984/140‑1 (MQ=255)

                                                                             aaaGGGATGTTCTGCGTGATTAAGGTAGAACATATCTATCCACGGCGCGATGAGTTGTTTAAACTCATCTTCAGTGAGCGGATTCATTATGCGATGTCGAAATTCAACGTCATCTTTTGCCGGGGCGATAATTTGCCCaa                                                          <  2:345610/140‑1 (MQ=255)

                                                                               aGGGATGTTCTGCGTGATTAAGGTAGAACATATCTATCCACGGCGCGATGAGTTGTTTAAACTCATCTTCAGTGAGCGGATTCATTATGCGATGTCGAAATTCAACGTCATCTTTTGCCGGGGCGATAATTTGCCCAATg                                                        >  1:1084283/1‑140 (MQ=255)

                                                                                 ggATGTTCTGCGTGATTAAGGTAGAACATATCTATCCACGGCGCGATGAGTTGTTTAAACTCATCTTCAGTGAGCGGATTCATTATGCGATGTCGAAATTCAACGTCATCTTTTGCCGGGGCGATAATTTGCCCAATGCa                                                      >  2:1364616/1‑140 (MQ=255)

                                                                                    tGTTCTGCGTGATTAAGGTAGAACATATCTATCCACGGCGCGATGAGTTGTTTAAACTCATCTTCAGTGAGCGGATTCATTATGCGATGTCGAAATTCAACGTCATCTTTTGCCGGGGCGATAATTTGCCCAATg                                                        <  1:39321/135‑1 (MQ=255)

                                                                                    tGTTCTGCGTGATTAAGGTAGAACATATCTATCCACGGCGCGATGAGTTGTTTAAACTCATCTTCAGTGAGCGGATTCATTATGCGATGTCGAAATTCAACGTCATCTTTTGCCGGGGCGATAATTTGCCCAATg                                                        >  2:39321/1‑135 (MQ=255)

                                                                                    tGTTCTGCGTGATTAAGGTAGAACATATCTATCCACGGCGCGATGAGTTGTTTAAACTCATCTTCAGTGAGCGGATTCATTATGCGATGTCGAAATTCAACGTCATCTTTTGCCGGGGCGATAATTTGCCCAATGCAAAc                                                   >  1:58520/1‑140 (MQ=255)

                                                                                    tGTTCTGCGTGATTAAGGTAGAACATATCTATCCACGGCGCGATGAGTTGTTTAAACTCATCTTCAGTGAGCGGATTCATTATGCGATGTCGAAATTCAACGTCATCTTTTGCCGGGGCGATAATTTGCCCAATGCAAAc                                                   >  2:240439/1‑140 (MQ=255)

                                                                                     gTTCTGCGTGATTAAGGTAGAACATATCTATCCACGGCGCGATGAGTTGTTTAAACTCATCTTCAGTGAGCGGATTCATTATGCGATGTCGAAATTCAACGTCATCTTTTGCCGGGGCGATAATTTGCCCAATGCAAAcc                                                  <  1:1053657/140‑1 (MQ=255)

                                                                                       tCTGCGTGATTAAGGTAGAACATATCTATCCACGGCGCGATGAGTTGTTTAAACTCATCTTCAGTGAGCGGATTCATTATGCGATGTCGAAATTCAACGTCATCTTTTGCCGGGGCGATAATTTGCCCAATGCAAACcag                                                <  1:547590/140‑1 (MQ=255)

                                                                                       tCTGCGTGATTAAGGTAGAACATATCTATCCACGGCGCGATGAGTTGTTTAAACTCATCTTCAGTGAGCGGATTCATTATGCGATGTCGAAATTCAACGTCATCTTTTGCCGGGGCGATAATTTGCCCAATGCAAACcag                                                <  2:58520/140‑1 (MQ=255)

                                                                                       tCTGCGTGATTAAGGTAGAACATATCTATCCACGGCGCGATGAGTTGTTTAAACTCATCTTCAGTGAGCGGATTCATTATGCGATGTCGAAATTCAACGTCATCTTTTGCCGGGGCGATAATTTGCCCAATGCAAACcag                                                <  2:642915/140‑1 (MQ=255)

                                                                                        cTGCGTGATTAAGGTAGAACATATCTATCCACGGCGCGATGAGTTGTTTAAACTCATCTTCAGTGAGCGGATTCATTATGCGATGTCGAAATTCAACGTCATCTTTTGCCGGGGCGATAATTTGCCCAATGCAAACcagc                                               <  1:192438/140‑1 (MQ=255)

                                                                                         tGCGTGATTAAGGTAGAACATATCTATCCACGGCGCGATGAGTTGTTTAAACTCATCTTCAGTGAGCGGATTCATTATGCGATGTCGAAATTCAACGTCATCTTTTGCCGGGGCGATAATTTGCCCAATGCAAACcag                                                <  1:1175577/138‑1 (MQ=255)

                                                                                         tGCGTGATTAAGGTAGAACATATCTATCCACGGCGCGATGAGTTGTTTAAACTCATCTTCAGTGAGCGGATTCATTATGCGATGTCGAAATTCAACGTCATCTTTTGCCGGGGCGATAATTTGCCCAATGCAAACcag                                                >  2:1175577/1‑138 (MQ=255)

                                                                                           cGTGATTAAGGTAGAACATATCTATCCACGGCGCGATGAGTTGTTTAAACTCATCTTCAGTGAGCGGATTCATTATGCGATGTCGAAATTCAACGTCATCTTTTGCCGGGGCGATAATTTGCCCAATGCAAACcag                                                <  1:1360800/136‑1 (MQ=255)

                                                                                           cGTGATTAAGGTAGAACATATCTATCCACGGCGCGATGAGTTGTTTAAACTCATCTTCAGTGAGCGGATTCATTATGCGATGTCGAAATTCAACGTCATCTTTTGCCGGGGCGATAATTTGCCCAATGCAAACcag                                                >  2:1360800/1‑136 (MQ=255)

                                                                                           cGTGATTAAGGTAGAACATATCTATCCACGGCGCGATGAGTTGTTTAAACTCATCTTCAGTGAGCGGATTCATTATGCGATGTCGAAATTCAACGTCATCTTTTGCCGGGGCGATAATTTGCCCAATGCAAACCAGCAGt                                            >  2:880912/1‑140 (MQ=255)

                                                                                           cGTGATTAAGGTAGAACATATCTATCCACGGCGCGATGAGTTGTTTAAACTCATCTTCAGTGAGCGGATTCATTATGCGATGTCGAAATTCAACGTCATCTTTTGCCGGGGCGATAATTTGCCCAATGCAAACCAGCAGt                                            >  1:1167909/1‑140 (MQ=255)

                                                                                           cGTGATTAAGGTAGAACATATCTATCCACGGCGCGATGAGTTGTTTAAACTCATCTTCAGTGAGCGGATTCATTATGCGATGTCGAAATTCAACGTCATCTTTTGCCGGGGCGATAATTTGCCCAATGCAAACCAGCAGt                                            >  1:1515078/1‑140 (MQ=255)

                                                                                           cGTGATTAAGGTAGAACATATCTATCCACGGCGCGATGAGTTGTTTAAACTCATCTTCAGTGAGCGGATTCATTATGCGATGTCGAAATTCAACGTCATCTTTTGCCGGGGCGATAATTTGCCCAATGCAAACCAGCAGt                                            >  1:1257153/1‑140 (MQ=255)

                                                                                           cGTGATTAAGGTAGAACATATCTATCCACGGCGCGATGAGTTGTTTAAACTCATCTTCAGTGAGCGGATTCATTATGCGATGTCGAAATTCAACGTCATCTTTTGCCGGGGCGATAATTTGCCCAATGCAAACCAGCAGt                                            >  2:1168745/1‑140 (MQ=255)

                                                                                           cGTGATTAAGGAAGAACATATCTATCCACGGCGCGATGAGTTGTTTAAACTCATCTTCAGTGAGCGGATTCATTATGCGATGTCGAAATTCAACGTCATCTTTTGCCGGGGCGATAATTTGCCCAATGCAAACCAGCAGt                                            >  2:1326053/1‑140 (MQ=255)

                                                                                                ttAAGGTAGAACATATCTATCCACGGCGCGATGAGTTGTTTAAACTCATCTTCAGTGAGCGGATTCATTATGCGATGTCGAAATTCAACGTCATCTTTTGCCGGGGCGATAATTTGCCCAATGCAAACCAGCAGTg                                           >  2:1945754/1‑136 (MQ=255)

                                                                                                ttAAGGTAGAACATATCTATCCACGGCGCGATGAGTTGTTTAAACTCATCTTCAGTGAGCGGATTCATTATGCGATGTCGAAATTCAACGTCATCTTTTGCCGGGGCGATAATTTGCCCAATGCAAACCAGCAGTGCTaa                                       >  2:175953/1‑140 (MQ=255)

                                                                                                      tAGAACTTATCTATCCACGGCGCGATAAGTTGTTTAACCTCATCTTCAGTGAGCGGATTCATTATGCGATGTCGAAATTCAACGTCATCTTTTGCCGGGGCGATAATTTGCCCAATGCAAACCAGCAGTGCTAAAGCGGc                                 <  2:40507/140‑1 (MQ=255)

                                                                                                      tAGAACATATCTATCCACGGCGCGATGAGTTGTTTAAACTCATCTTCAGTGAGCGGATTCATTATGCGATGTCGAAATTCAACGTCATCTTTTGCCGGGGCGATAATTTGCCCAATGCAAACCAGCAGTGCTAAAGCGGc                                 <  2:1598491/140‑1 (MQ=255)

                                                                                                      tAGAACATATCTATCCACGGCGCGATGAGTTGTTTAAACTCATCTTCAGTGAGCGGATTCATTATGCGATGTCGAAATTCAACGTCATCTTTTGCCGGGGCGATAATTTGCCCAATGCAAACCAGCAGTGCTAAAGCGGc                                 <  2:1094092/140‑1 (MQ=255)

                                                                                                      tAGAACATATCTATCCACGGCGCGATGAGTTGTTTAAACTCATCTTCAGTGAGCGGATTCATTATGCGATGTCGAAATTCAACGTCATCTTTTGCCGGGGCGATAATTTGCCCAATGCAAACCAGCAGTGCTAAAGCGGc                                 <  2:1218883/140‑1 (MQ=255)

                                                                                                       aGAACATATCTATCCACGGCGCGATGAGTTGTTTAAACTCATCTTCAGTGAGCGGATTCATTATGCGATGTCGAAATTCAACGTCATCTTTTGCCGGGGCGATAATTTGCCCAATGCAAACCAGCAGTGCTAAAGCGGcc                                <  2:1503244/140‑1 (MQ=255)

                                                                                                        gAACATATCTATCCACGGCGCGATGAGTTGTTTAAACTCATCTTCAGTGAGCGGATTCATTATGCGATGTCGAAATTCAACGTCATCTTTTGCCGGGGCGATAATTTGCCCAATGCAAACCAGCAGTGCTAAAGCGGCCa                               >  1:1393050/1‑140 (MQ=255)

                                                                                                         aaCATATCTATCCACGGCGCGATGAGTTGTTTAAACTCATCTTCAGTGAGCGGATTCATTATGCGATGTCGAAATTCAACGTCATCTTTTGCCGGGGCGATAATTTGCCCAATGCAAACCAGCAGTGCTAAAGCGGCCAg                              >  2:555773/1‑140 (MQ=255)

                                                                                                              atctatcCACGGCGCGATGAGTTGTTTAAACTCATCTTCAGTGAGCGGATTCATTATGCGATGTCGAAATTCAACGTCATCTTTTGCCGGGGCGATAATTTGCCCAATGCAAACCAGCAGTGCTAAAGCGGCCAGTTCCa                         >  1:314289/1‑140 (MQ=255)

                                                                                                                ctatcCACGGCGCGATGAGTTGTTTAAACTCATCTTCAGTGAGCGGATTCATTATGCGATGTCGAAATTCAACGTCATCTTTTGCCGGGGCGATAATTTGCCCAATGCAAACCAGCAGTGCTAAAGCGGCCAGTTCCata                       >  2:1806244/1‑140 (MQ=255)

                                                                                                                ctatcCACGGCGCGATGAGTTGTTTAAACTCATCTTCAGTGAGCGGATTCATTATGCGATGTCGAAATTCAACGTCATCTTTTGCCGGGGCGATAATTTGCCCAATGCAAACCAGCAGTGCTAAAGCGGCCAGTTCCata                       >  1:1632628/1‑140 (MQ=255)

                                                                                                                ctatcCACGGCGCGATGAGTTGTTTAAACTCATCTTCAGTGAGCGGATTCATTATGCGATGTCGAAATTCAACGTCATCTTTTGCCGGGGCGATAATTTGCCCAATGCAAACCAGCAGTGCTAAAGCGGCCAGTTCCata                       >  1:1014995/1‑140 (MQ=255)

                                                                                                                   tcCACGGCGCGATGAGTTGTTTAAACTCATCTTCAGTGAGCGGATTCATTATGCGATGTCGAAATTCAACGTCATCTTTTGCCGGGGCGATAATTTGCCCAATGCAAACCAGCAGTGCTAAAGCGGCCAGTTCCATATCg                    >  1:785762/1‑140 (MQ=255)

                                                                                                                     cACGGCGCGATGAGTTGTTTAAACTCATCTTCAGTGAGCGGATTCATTATGCGATGTCGAAGTTCAACGTCATCTTTTGCCGGGGCGATAATTTGCCCAATGCAAACCAGCAGTGCTAAAGCGGCCAGTTCCATATCGTc                  >  1:475190/1‑140 (MQ=255)

                                                                                                                     cACGGCGCGATGAGTTGTTTAAACTCATCTTCAGTGAGCGGATTCATTATGCGATGTCGAAATTCAACGTCATCTTTTGCCGGGGCGATAATTTGCCCAATGCAAACCAGCAGTGCTAAAGCGGCCAGTTCCATATCGTc                  >  1:1862329/1‑140 (MQ=255)

                                                                                                                     cACGGCGCGATGAGTTGTTTAAACTCATCTTCAGTGAGCGGATTCATTATGCGATGTCGAAATTCAACGTCATCTTTTGCCGGGGCGATAATTTGCCCAATGCAAACCAGCAGTACTAAAGCGGCCAGTTCCATATCGTc                  >  2:1325805/1‑140 (MQ=255)

                                                                                                                      aCGGCGCGATGAGTTGTTTAAACTCATCTTCAGTGAGCGGATTCATTATGCGATGTCGAAATTCAACGTCATCTTTTGCCGGGGCGATAATTTGCCCAATGCAAACCAGCAGTGCTAAAGCGGCCAGTTCCATATCGTCa                 <  2:1862329/140‑1 (MQ=255)

                                                                                                                      aCGGCGCGATGAGTTGTTTAAACTCATCTTCAGTGAGCGGATTCATTATGCGATGTCGAAATTCAACGTCATCTTTTGCCGGGGCGATAATTTGCCCAATGCAAACCAGCAGTGCTAAAGCGGCCAGTTCCATATCGTCa                 <  2:126529/140‑1 (MQ=255)

                                                                                                                      aCGGCGCGATGAGTTGTTTAAACTCATCTTCAGTGAGCGGATTCATTATGCGATGTCGAAATTCAACGCCATCTTTTGCCGGGGCGATAATTTGCCCAATGCAAACCAGCAGTGCTAAAGCGGCCAGTTCCATATCGTCa                 >  2:1436966/1‑140 (MQ=255)

                                                                                                                        ggCGCGATGAGTTGTTTAAACTCATCTTCAGTGAGCGGATTCATTATGCGATGTCGAAATTCAACGTCATCTTTTGCCGGGGCGATAATTTGCCCAATGCAAACCAGCAGTGCTAAAGCGGCCAGTTCCATATCGTCACg               >  1:252186/1‑140 (MQ=255)

                                                                                                                        ggCGCGATGAGTTGTTTAAACTCATCTTCAGTGAGCGGATTCATTATGCGATGTCGAAATTCAACGTCATCTTTTGCCGGGGCGATAATTTGCCCAATGCAAACCAGCAGTGCTAAAGCGGCCAGTTCCATATCGTCACg               >  2:77596/1‑140 (MQ=255)

                                                                                                                        ggCGCGATGAGTTGTTTAAACTCATCTTCAGTGAGCGGATTCATTATGCGATGTCGAAATTCAACGTCATCTTTTGCCGAGGCGATAATTTGCCCAATGCAAACCAGCAGTGCTAAAGCGGCCAGTTCCATATCGTCACg               >  1:222358/1‑140 (MQ=255)

                                                                                                                         gcgcGATGAGTTGTTTAAACTCATCTTCAGTGAGCGGATTCATTATGCGATGTCGAAATTCAACGTCATCTTTTGCCGGGGCGATAATTTGCCCAATGCAAACCAGCAGTGCTAAAGCGGCCAg                              >  1:1956517/1‑124 (MQ=255)

                                                                                                                          cgcgATGAGTTGTTTAAACTCATCTTCAGTGAGCGGATTCATTATGCGATGTCGAAATTCAACGTCATCTTTTGCCGGGGCGATAATTTGCCCAATGCAAACCAGCAGTGCTAAAGCGGCCAGTTCCATATCGTCACggg             >  2:1838695/1‑140 (MQ=255)

                                                                                                                          cgcgATGAGTTGTTTAAACTCATCTTCAGTGAGCGGATTCATTATGCGATGTCGAAATTCAACGTCATCTTTTGCCGGGGCGATAATTTGCCCAATGCAAACCAGCAGTGCTAAAGCGGCCAGTTCCATATCGTCACggg             >  2:1801790/1‑140 (MQ=255)

                                                                                                                          cgcgATGAGTTGTTTAAACTCATCTTCAGTGAGCGGATTCATTATGCGATGTCGAAATTCAACGTCATCTTTTGCCGGGGCGATAATTTGCCCAATGCAAACCAGCAGTGCTAAAGCGGCCAGTTCCATATCGTCACggg             >  1:808982/1‑140 (MQ=255)

                                                                                                                          cgcgATGAGTTGTTTAAACTCATCTTCAGTGAGCGGATTCATTATGCGATGTCGAAATTCAACGTCATCTTTTGCCGGGGCGATAATTTGCCCAATGCAAACCAGCAGTGCTAAAGCGGCCAGTTCCATATCGTCACggg             >  2:787933/1‑140 (MQ=255)

                                                                                                                          cgcgATGAGTTGTTTAAACTCATCTTCAATGAGCGGATTCATTATGCGATGTCGAAATTCAACGTCATCTTTTGCCGGGGCGATAATTTGCCCAATGCAAACCAGCAGTGCTAAAGCGGCCAGTTCCATATCGTCACggg             >  1:1100883/1‑140 (MQ=255)

                                                                                                                           gcgATGAGTTGTTTAAACTCATCTTCAGTGAGCGGATTCATTATGCGATGTCGAAATTCAACGTCATCTTTTGCCGGGGCGATAATTTGCCCAATGCAAACCAGCAGTGCTAAAGCGGCCAGTTCCATATCGTCACgggg            <  1:1838695/140‑1 (MQ=255)

                                                                                                                           gcgATGAGTTGTTTAAACTCATCTTCAGTGAGCGGATTCATTATGCGATGTCGAAATTCAACGTCATCTTTTGCCGGGGCGATAATTTGCCCAATGCAAACCAGCAGTGCTAAAGCGGCCAGTTCCATATCGTCACgggg            >  2:1779931/1‑140 (MQ=255)

                                                                                                                             gATGAGTTGTTTAAACTCATCTTCAGTGAGCGGATTCATTATGCGATGTCGAAATTCAACGTCATCTTTTGCCGGGGCGATAATTTGCCCAATGCAAACCAGCAGTGCTAAAGCGGCCAGTTCCATATCGTCACGGGGCa          >  2:294141/1‑140 (MQ=255)

                                                                                                                                     gtttAAACTCATCTTCAGTGAGCGGATTCATTATGCGATGTCGAAATTCAACGTCATCTTTTGCCGGGGCGATAATTTGCCCAATGCAAACCAGCAGTGCTAAAGCGGCCAGTTCCATATCGTCACGGGGCAAACTTAAt  <  1:1168745/140‑1 (MQ=255)

TTCGTCGCGCCGCTTACCCCAGCCAACAGTTTTTCCATTGGAGTCACATCATTTGCTTTGACACCTTTGGTCTGCATAAAGGGATGTTCTGCGTGATTAAGGTAGAACATATCTATCCACGGCGCGATGAGTTGTTGAAACTCATCTTCAGTGAGCGGATTCATTATGCGATGTCGAAATTCAACGTCATCTTTTGCCGGGGCGATAATTTGCCCAATGCAAACCAGCAGTGCTAAAGCGGCCAGTTCCATATCGTCACGGGGCAAACTTAAT  >  NC_000913/2883762‑2884034

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`