Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,352,471	C→A	E185D (GAG→GAT)	arcB ←	sensory histidine kinase ArcB

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,352,471	0	C	A	100.0%	324.1 / NA	92	E185D (GAG→GAT)	arcB	sensory histidine kinase ArcB
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base A (34/58);  total (34/58)

ACTGTTCATAGGTCAGTGACACATTATGACGGAACACTTTTTCATCGGTTTCAATGACTTTTGCGGCGGCTTCCGGTGAGTAAACATCAGCAGGTTTCAGGTGAACCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGCTCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCAAGGAAGGAACGTAAGAATGAGGATTGCTGCTCGAGCTGAATTTGTGTCTCTTCGCGCTCTTTGA  >  NC_000913/3352335‑3352607                                                                                                                                         |                                                                                                                                         aCTGTTCATAGGTCAGTGACACATTATGACGGAACACTTTTTCATCGGTTTCAATGACTTTTGCTGCGGCTTCCGGTGAGTAAACATCAGCAGGTTTCAGGTGAACCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGATcc                                                                                                                                       <  2:1354683/140‑1 (MQ=255)    gTTCATAGGTCAGTGACACATTATGACGGAACACTTTTTCATCGGTTTCAATGACTTTTGCGGCGGCTTCCGGTGAGTAAACATCAGCAGGTTTCAGGTGAACCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGATCCATc                                                                                                                                    >  1:489890/1‑140 (MQ=255)    gTTCATAGGTCAGTGACACATTATGACGGAACACTTTTTCATCGGTTTCAATGACTTTTGCGGCGGCTTCCGGTGAGTAAACATCAGCAGGTTTCAGGTGAACCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGATCCATc                                                                                                                                    >  2:793835/1‑140 (MQ=255)     ttCATAGGTCAGTGACACATTATGACGGAACACTTTTTCATCGGTTTCAATGACTTTTGCGGCGGCTTCCGGGGAGGAAACATCAGCAGGATTCAGATGAACCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGATTCATcg                                                                                                                                   >  2:581482/1‑140 (MQ=255)      tCATAGGTCAGTGACACATTATGACGGAACACTTTTTCATCGGTTTCAATGACTTTTGCGGCGGCTTCCGGTGAGTAAACATCAGCAGGTTTCAGGTGAACCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGATCCATcgc                                                                                                                                  <  2:489890/140‑1 (MQ=255)       cATAGGTCAGTGACACATTATGACGGAACACTTTTTCATCGGTTTCAATGACTTTTGCGGCGGCTTCCGGTGAGTAAACATCAGCAGGTTTCAGGTGAACCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGATCCATcgcg                                                                                                                                 <  1:1917820/140‑1 (MQ=255)       cATAGGTCAGTGACACATTATGACGGAACACTTTTTCATCGGTTTCAATGACTTTTGCGGCGGCTTCCGGTGAGTAAACATCAGCAGGTTTCAGGTGAACCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGATCCATcgcg                                                                                                                                 <  1:1186619/140‑1 (MQ=255)       cATAGGTCAGTGACACATTATGACGGAACACTTTTTCATCGGTTTCAATGACTTTTGCGGCGGCTTCCGGTGAGTAAACATCAGCAGGTTTCAGGTGAACCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGATCCATcgcg                                                                                                                                 <  2:192466/140‑1 (MQ=255)       cATAGGTCAGTGACACATTATGACGGAACACTTTTTCATCGGTTTCAATGACTTTTGCGGCGGCTTCCGGTGAGTAAACATCAGCAGGTTTCAGGTGAACCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGATCCATcgcg                                                                                                                                 <  1:1346477/140‑1 (MQ=255)       cATAGGTCAGTGACACATTATGACGGAACACTTTTTCATCGGTTTCAATGACTTTTGCGGCGGCTTCCGGTGAGTAAACATCAGCAGGTTTCAGGTGAACCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGATCCATcgcg                                                                                                                                 <  2:491739/140‑1 (MQ=255)        aTAGGTCAGTGACACATTATGACGGAACACTTTTTCATCGGTTTCAATGACTTTTGCGGCGGCTTCCGGTGAGTAAACATCAGCAGGTTTCAGGTGAACCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGATCCATcgcgc                                                                                                                                >  1:128926/1‑140 (MQ=255)           ggTCAGTGACACATTATGACGGAACACTTTTTCATCGGTTTCAATGACTTTTGCGGCGGCTTCCGGTGAGTAAACATCAGCAGGTTTCAGGTGAACCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGATCCATCGCGCGGt                                                                                                                             <  1:1806028/140‑1 (MQ=255)           ggTCAGTGACACATTATGACGGAACACTTTTTCATCGGTTTCAATGACTTTTGCGGCGGCTTCCGGTGAGTAAACATCAGCAGGTTTCAGGTGAACCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGATCCATCGCGCGGt                                                                                                                             <  1:134874/140‑1 (MQ=255)            gTCAGTGACACATTATGACGGAACACTTTTTCATCGGTTTCAATGACTTTTGCGGCGGCTTCCGGTGAGTAAACATCAGCAGGTTTCAGGTGAACCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGATCCATCGCGCGGtt                                                                                                                            >  2:1039005/1‑140 (MQ=255)               aGTGACACATTATGACGGAACACTTTTTCATCGGTTTCAATGACTTTTGCGGCGGCTTCCGGTGAGTAAACATCAGCAGGTTTCAGGTGAACCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGATCCATcgc                                                                                                                                  <  1:581704/131‑1 (MQ=255)               aGTGACACATTATGACGGAACACTTTTTCATCGGTTTCAATGACTTTTGCGGCGGCTTCCGGTGAGTAAACATCAGCAGGTTTCAGGTGAACCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGATCCATcgc                                                                                                                                  >  2:581704/1‑131 (MQ=255)               aGTGACACATTATGACGGAACACTTTTTCATCGGTTTCAATGACTTTTGCGGCGGCTTCCGGTGAGTAAACATCAGCAGGTTTCAGGTGAACCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGATCCATCGCGCGGTTAcc                                                                                                                         >  1:757472/1‑139 (MQ=255)               aGTGACACATTATGACGGAACACTTTTTCATCGGTTTCAATGACTTTTGCGGCGGCTTCCGGTGAGTAAACATCAGCAGGTTTCAGGTGAACCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGATCCATCGCGCGGTTACa                                                                                                                         >  2:1394638/1‑140 (MQ=255)               aGTGACACATTATGACGGAACACTTTTTCATCGGTTTCAATGACTTTTGCGGCGGCTTCCGGTGAGTAAACATCAGCAGGTTTCAGGTGAACCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGATCCATCGCGCGGTTACa                                                                                                                         >  2:714016/1‑140 (MQ=255)               aGTGACACATTATGACGGAACACTTTTTCATCGGTTTCAATGACTTTTGCGGCGGCTTCCGGTGAGTAAACATCAGCAGGTTTCAGGTGAACCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGATCCATCGCGCGGTTACa                                                                                                                         >  1:739626/1‑140 (MQ=255)               aGTGACACATTATGACGGAACACTTTTTCATCGGTTTCAATGACTTTTGCGGCGGCTTCCGGGGAGTAAACATCAGCAGGTTTCAGGTGAACCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGATCCATCGCGCGGTTACa                                                                                                                         >  1:434641/1‑140 (MQ=255)               aGTGAAACATTATGACGGAACACTTTTTCATCGGCTTCTATGACTTTTGCGGCGGCTTCCGGTGAGGAAACATCAGCAGGTTTCAGGTGAACCAGGTGTTTTTTGCTTTTTCCCGTCTGCAGAGCCATCGCGCGGGTACa                                                                                                                         >  2:1968705/1‑140 (MQ=255)                 tGACACATTATGACGGAACACTTTTTCATCGGTTTCAATGACTTTTGCGGCGGCTTCCGGTGAGTAAACATCAGCAGGTTTCAGGTGAACCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGATCCATCGCGCGGTTACAGc                                                                                                                       >  2:344584/1‑140 (MQ=255)                 tGACACATTATGACGGAACACTTTTTCATCGGTTTCAATGACTTTTGCGGCGGCTTCCGGTGAGTAAACATCAGCAGGTTTCAGGTGAACCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGATCCATCGCGCGGTTACAGc                                                                                                                       >  1:860453/1‑140 (MQ=255)                   acacATTATGACGGAACACTTTTTCATCGGTTTCAATGACTTTTGCGGCGGCTTCCGGTGAGTAAACATCAGCAGGTTTCAGGTGAACCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGATCCATCGCGCGGTTACAGCCg                                                                                                                     <  2:1007805/140‑1 (MQ=255)                      caTTATGACGGAACACTTTTTCATCGGTTTCAATGACTTTTGCGGCGGCTTCCGGTGAGTAAACATCAGCAGGTTTCAGGTGAACCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGATCCATCGCGCGGTTACAGCCGGaa                                                                                                                  <  2:1562967/140‑1 (MQ=255)                      caTTATGACGGAACACTTTTTCATCGGTTTCAATGACTTTTGCGGCGGCTTCCGGTGAGTAAACATCAGCAGGTTTCAGGTGAACCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGATCCATCGCGCGGTTACAGCCGGaa                                                                                                                  <  2:815565/140‑1 (MQ=255)                      caTTATGACGGAACACTTTTTCATCGGTTTCAATGACTTTTGCGGCGGCTTCCGGTGAGTAAACATCAGCAGGTTTCAGGTGAACCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGATCCATCGCGCGGTTACAGCCGGaa                                                                                                                  <  1:786325/140‑1 (MQ=255)                      caTTATGACGGAACACTTTTTCATCGGTTTCAATGACTTTTGCGGCGGCTTCCGGTGAGTAAACATCAGCAGGTTTCAGGTGAACCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGATCCATCGCGCGGTTACAGCCGGaa                                                                                                                  <  1:336669/140‑1 (MQ=255)                      caTTATGACGGAACACTTTTTCATCGGTTTCAATGACTTTTGCGGCGGCTTCCGGTGAGTAAACATCAGCAGGTTTCAGGTGAACCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGATCCATCGCGCGGTTACAGCCGGaa                                                                                                                  <  1:371376/140‑1 (MQ=255)                        ttATGACGGAACACTTTTTCATCGGTTTCAATGACTTTTGCGGCGGCTTCCGGTGAGTAAACATCAGCAGGTTTCAGGTGAACCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGATCCATCGCGCGGTTACAGCCGGaaaa                                                                                                                <  2:1144543/140‑1 (MQ=255)                        ttATGACGGAACACTTTTTCATCGGTTTCAATGACTTTTGCGGCGGCTTCCGGTGAGTAAACATCAGCAGGTTTCAGGTGAACCAGTTGTTTTTCACTTTTTCCGGTCAGCAGATCCATCGCGCGGTTACAGCCGGaaaa                                                                                                                <  2:37304/140‑1 (MQ=255)                         tATGACGGAACACTTTTTCATCGGTTTCAATGACTTTTGCGGCGGCTTCCGGTGAGTAAACATCAGCAGGTTTCAGGTGAACCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGATCCATCGCGCGGTTACAGCCGGAAAAc                                                                                                               >  2:98687/1‑140 (MQ=255)                           tGACGGAACACTTTTTCATCGGTTTCAATGACTTTTGCGGCGGCTTCCGGTGAGTAAACATCAGCAGGTTTCAGGTGAACCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGATCCATCGCGCGGTTACAGCCGGAAAActc                                                                                                             >  1:975631/1‑140 (MQ=255)                            gACGGAACACTTTTTCATCGGTTTCAATGACTTTTGCGGCGGCTTCCGGTGAGTAAACATCAGCAGGTTTCAGGTGAACCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGATCCATCGCGCGGTTACAGCCGGAAAActct                                                                                                            <  2:1535267/140‑1 (MQ=255)                              cGGAACACTTTTTCATCGGTTTCAATGACTTTTGCGGCGGCTTCCGGTGAGTAAACATCAGCAGGTTTCAGGTGAACCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGATCCATCGCGCGGTTACAGCCGGAAAACTCttt                                                                                                          >  1:59082/1‑140 (MQ=255)                              cGGAACACTTTTTCATCGGTTTCAATGACTTTTGCGGCGGCTTCCGGTGAGTAAACAGCAGCAGGTTTCAGGTGAACCAGTTGTTTTTCGCTTTTTCCGGTTAGCAGATCCATCGCGCGGTTACAGCCGGAAAACCCttt                                                                                                          >  2:879224/1‑140 (MQ=255)                                gAACACTTTTTCATCGGTTTCAATGACTTTTGCGGCGGCTTCCGGTGAGTAAACATCAGCAGGTTTCAGGTGAACCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGATCCATCGCGCGGTTACAGCCGGAAAACTCTTTAt                                                                                                        <  2:739626/140‑1 (MQ=255)                                 aaCACTTTTTCATCGGTTTCAATGACTTTTGCGGCGGCTTCCGGTGAGTAAACATCAGCAGGTTTCAGGTGAACCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGATCCATCGCGCGGTTACAGCCGGAAAACTCTTTATc                                                                                                       >  1:517865/1‑140 (MQ=255)                                   cacTTTTTCATCGGTTTCAATGACTTTTGCGGCGGCTTCCGGTGAGTAAACATCAGCAGGTTTCAGGTGAACCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGATCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCtt                                                                                                     >  2:1781719/1‑140 (MQ=255)                                   cacTTTTTCATCGGTTTCAATGACTTTTGCGGCGGCTTCCGGTGAGTAAACATCAGCAGGTTTCAGGTGAACCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGATCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCtt                                                                                                     >  1:223017/1‑140 (MQ=255)                                     cTTTTTCATCGGTTTCAATGACTTTTGCGGCGGCTTCCGGTGAGTAAACATCAGCAGGTTTCAGGTGAACCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGATCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCg                                                                                                   <  2:307112/140‑1 (MQ=255)                                      tttttCATCGGTTTCAATGACTTTTGCGGCGGCTTCCGGTGAGTAAACATCAGCAGGTTTCAGGTGAACCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGATCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGt                                                                                                  >  1:1063421/1‑140 (MQ=255)                                            aTCGGTTTCAATGACTTTTGCGGCGGCTTCCGGTGAGTAAACATCAGCAGGTTTCAGGTGAACCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGATCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGAt                                                                                            <  1:638195/140‑1 (MQ=255)                                                gTTTCAATGACTTTTGCGGCGGCTTCCGGTGAGTAAACATCAGCAGGTTTCAGGTGAACCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGATCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATaaaa                                                                                        >  1:1850104/1‑140 (MQ=255)                                                 tttCAATGACTTTTGCGGCGGCTTCCGGTGAGTAAACATCAGCAGGTTTCAGGTGAACCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGATCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATaaaaa                                                                                       <  2:1063421/140‑1 (MQ=255)                                                  ttCAATGACTTTTGCGGCGGCTTCCGGTGAGTAAACATCAGCAGGTTTCAGGTGAACCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGATCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATaaaaaa                                                                                      <  1:1813594/140‑1 (MQ=255)                                                   tCAATGACTTTTGCGGCGGCTTCCGGTGAGTAAACATCAGCAGGTTTCAGGTGAACCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGATCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAAc                                                                                     <  2:860453/140‑1 (MQ=255)                                                    cAATGACTTTTGCGGCGGCTTCCGGTGAGTAAACATCAGCAGGTTTCAGGTGAACCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGATCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAAcc                                                                                    <  2:1850104/140‑1 (MQ=255)                                                       tGACTTTTGCGGCGGCTTCCGGTGAGTAAACATCAGCAGGTTTCAGGTGAACCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGATCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAgg                                                                                 <  1:1137463/140‑1 (MQ=255)                                                           ttttGCGGCGGCTTCCGGTGAGTAAACATCAGCAGGTTTCAGGTGAACCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGATCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCgg                                                                             >  1:338378/1‑140 (MQ=255)                                                           ttttGCGGCGGCTTCCGGTGAGTAAACATCAGCAGGTTTCAGGTGAACCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGATCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCgg                                                                             >  1:1277402/1‑140 (MQ=255)                                                             ttGCGGCGGCTTCCGGTGAGTAAACATCAGCAGGTTTCAGGTGAACCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGATCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGt                                                                           >  1:518174/1‑140 (MQ=255)                                                              tGCGGCGGCTTCCGGTGAGTAAACATCAGCAGGTTTCAGGTGAACCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGATCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTg                                                                          <  2:59082/140‑1 (MQ=255)                                                              tGCGGCGGCTTCCGGTGAGTAAACATCAGCAGGTTTCAGGTGAACCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGATCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTg                                                                          <  2:1277402/140‑1 (MQ=255)                                                              tGCGGCGGCTTCCGGTGAGTAAACATCAGCAGGTTTCAGGTGAACCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGATCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTg                                                                          <  1:793835/140‑1 (MQ=255)                                                              tGCGGCGGCTTCCGGTGAGTAAACATCAGCAGGTTTCAGGTGAACCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGATCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTg                                                                          >  1:430049/1‑140 (MQ=255)                                                               gcggcgGCTTCCGGTGAGTAAACATCAGCAGGTTTCAGGTGAACCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGATCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGa                                                                         <  2:1100408/140‑1 (MQ=255)                                                                   cggcTTCCGGTGAGTAAACATCAGCAGGTTTCAGGTGAACCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGATCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCa                                                                     <  1:1039005/140‑1 (MQ=255)                                                                    ggcTTCCGGTGAGTAAACATCAGCAGGTTTCAGGTGAACCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGATCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCAt                                                                    <  1:1781719/140‑1 (MQ=255)                                                                     gcTTCCGGTGAGTAAACATCAGCAGGTTTCAGGTGAACCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGATCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGc                                                                      >  2:1092363/1‑137 (MQ=255)                                                                     gcTTCCGGTGAGTAAACATCAGCAGGTTTCAGGTGAACCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGATCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGc                                                                      <  1:1092363/137‑1 (MQ=255)                                                                     gcTTCCGGTGAGTAAACATCAGCAGGTTTCAGGTGAACCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGATCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATc                                                                   <  2:1282274/140‑1 (MQ=255)                                                                          cGGTGAGTAAACATCAGCAGGTTTCAGGTGAACCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGATCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCaagga                                                              <  2:338378/140‑1 (MQ=255)                                                                            gTGAGTAAACATCAGCAGGTTTCAGGTGAACCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGATCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCaaggaag                                                            <  1:1311119/140‑1 (MQ=255)                                                                            gTGAGTAAACATCAGCAGGTTTCAGGTGAACCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGATCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCaaggaag                                                            <  2:975631/140‑1 (MQ=255)                                                                               aGTAAACATCAGCAGGTTTCAGGTGAACCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGATCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTg                                                                          >  2:1376138/1‑123 (MQ=255)                                                                               aGTAAACATCAGCAGGTTTCAGGTGAACCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGATCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTg                                                                          <  1:1376138/123‑1 (MQ=255)                                                                               aGTAAACATCAGCAGGTTTCAGGTGAACCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGATCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCaagga                                                              <  2:1452128/135‑1 (MQ=255)                                                                               aGTAAACATCAGCAGGTTTCAGGTGAACCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGATCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCaagga                                                              >  1:1452128/1‑135 (MQ=255)                                                                               aGTAAACATCAGCAGGTTTCAGGTGAACCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGATCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCAAggaaggaa                                                         <  2:430049/140‑1 (MQ=255)                                                                                  aaaCATCAGCAGGTTTCAGGTGAACCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGATCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCAAGGAAGGAACGt                                                      <  1:98687/140‑1 (MQ=255)                                                                                   aaCATCAGCAGGTTTCAGGTGAACCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGATCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCAAGGAAGGAACGTa                                                     <  2:366689/140‑1 (MQ=255)                                                                                   aaCATCAGCAGGTTTCAGGTGAACCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGATCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCAAGGAAGGAACGTa                                                     <  1:1495119/140‑1 (MQ=255)                                                                                   aaCATCAGCAGGTTTCAGGTGAACCAGTTGTTTTTCGCCTTTTCCGGTCAGCAGATCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCAAGGAAGGAACGTa                                                     >  1:1825508/1‑140 (MQ=255)                                                                                   aaCATCAGCAGGTTTCAGGTGAACCAGTTGTTTTTCGATTTTTCCGGTCAGCAGATCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCAAGGAAGGCACGTa                                                     <  1:879224/140‑1 (MQ=255)                                                                                           cagGTTTCAGGTGAACCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGATCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCAAGGAAGGAACGTAAGAATGAg                                             <  2:518174/140‑1 (MQ=255)                                                                                           cagGTTTCAGGTGAACCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGATCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCAAGGAAGGAACGTAAGAATGAg                                             <  2:517865/140‑1 (MQ=255)                                                                                           cagGTTTCAGGTGAACCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGATCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCAAGGAAGGAACGTAAGAATGAg                                             <  1:659553/140‑1 (MQ=255)                                                                                           cagGTTTCAGGTGAACCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGATCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCAAGGAAGGAACGTAAGAATGAg                                             >  2:1591165/1‑140 (MQ=255)                                                                                              gTTTCAGGTGAACCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGATCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCAAGGAAGGAACGTAAGAATGAGGAt                                          >  2:1804869/1‑140 (MQ=255)                                                                                                     gTGAACCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGATCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCAAGGAAGGAACGTAAGAATGAGGATTgctgct                                   <  2:223017/140‑1 (MQ=255)                                                                                                     gTGAACCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGATCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCAAGGAAGGAACGTAAGAATGAGGATTgctgct                                   <  1:344584/140‑1 (MQ=255)                                                                                                     gTGAACCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGATCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCAAGGAAGGAACGTAAGAATGAGGATTgctgct                                   <  2:1068741/140‑1 (MQ=255)                                                                                                        aaCCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGATCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCAAGGAAGGAACGTAAGAATGAGGATTGCTGCTCGa                                >  1:1240484/1‑140 (MQ=255)                                                                                                        aaCCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGATCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCAAGGAAGGAACGTAAGAATGAGGATTGCTGCTCGa                                <  1:272522/140‑1 (MQ=255)                                                                                                        aaCCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGATCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCAAGGAAGGAACGTAAGAATGAGGATTGCTGCTCGa                                >  2:1903810/1‑140 (MQ=255)                                                                                                         aCCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGATCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCAAGGAAGGAACGTAAGAATGAGGATTGCTGCTCGAg                               >  1:1365992/1‑140 (MQ=255)                                                                                                         aCCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGATCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCAAGGAAGGAACGTAAGAATGAGGATTGCTGCTCGAg                               <  1:1394638/140‑1 (MQ=255)                                                                                                         aCCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGATCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCAAGGAAGGAACGTAAGAATGAGGATTGCTGCTCGAg                               >  1:920650/1‑140 (MQ=255)                                                                                                         aCCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGATCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCAAGGAAGGAACGTAAGAATGAGGATTGCTGCTCGAg                               <  1:714016/140‑1 (MQ=255)                                                                                                         aCCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGATCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCAAGGAAGGAACGTAAGAATGAGGATTGCTGCTCGAg                               <  2:128926/140‑1 (MQ=255)                                                                                                                   tttCGCTTTTTCCGGTCAGCAGATCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCAAGGAAGGAACGTAAGAATGAGGATTGCTGCTCGAGCCGAATTtgt                     <  1:1903810/140‑1 (MQ=255)                                                                                                                        cTTTTTCCGGTCAGCAGATCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCAAGGAAGGAACGTAAGAATGAGGATTGCTGCTc                                  >  2:239697/1‑122 (MQ=255)                                                                                                                        cTTTTTCCGGTCAGCAGATCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCAAGGAAGGAACGTAAGAATGAGGATTGCTGCTc                                  <  1:239697/122‑1 (MQ=255)                                                                                                                        cTTTTTCCGGTCAGCAGATCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCAAGGAAGGAACGTAAGAATGAGGATTGCTGCTCGAGCTGAATTTGTGtctc                >  2:448472/1‑140 (MQ=255)                                                                                                                              ccGGTCAGCAGATCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCAAGGAAGGAACGTAAGAATGAGGATTGCTGCTCGAGCTGAATTTGTGTCTCTTcgcg          <  1:1968705/140‑1 (MQ=255)                                                                                                                                   cagcagATCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCAAGGAAGGAACGTAAGAATGAGGATTGCTGCTCGAGCTGAATTTGTGTCTCTTCGCGCTCtt     >  1:532561/1‑140 (MQ=255)                                                                                                                                      ccgcTCCATGGCGAGAATACAGCCGGAACACACTATATCTTCGGTACGATAAAAAACCAGGTAGGGTGAAGCATCAAGGAAGGAACGTAAGAATGAGGATTGCTGATCGAGCTGAATTTGTGTCTCTTCGCGCTCTTTGa  >  2:1303379/3‑140 (MQ=255)                                                                                                                                         |                                                                                                                                         ACTGTTCATAGGTCAGTGACACATTATGACGGAACACTTTTTCATCGGTTTCAATGACTTTTGCGGCGGCTTCCGGTGAGTAAACATCAGCAGGTTTCAGGTGAACCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGCTCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCAAGGAAGGAACGTAAGAATGAGGATTGCTGCTCGAGCTGAATTTGTGTCTCTTCGCGCTCTTTGA  >  NC_000913/3352335‑3352607

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑