BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	602,926	C→A	S323Y (TCT→TAT)	pheP →	phenylalanine:H(+) symporter PheP

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	602,926	0	C	A	100.0%	405.9 / NA	113	S323Y (TCT→TAT)	pheP	phenylalanine:H(+) symporter PheP
Reads supporting (aligned to +/- strand): ref base C (0/0); new base A (69/44); total (69/44)

Only 100 of 114 total aligned reads displayed.

TAGCCCGTTTGTGATGATTTTCCATAATCTCGACAGCAACGTGGTAGCTTCTGCGCTGAACTTCGTCATTCTGGTAGCATCGCTGTCAGTGTATAACAGCGGGGTTTACTCTAACAGCCGCATGCTGTTTGGCCTTTCTGTGCAGGGTAATGCGCCGAAGTTTTTGACTCGCGTCAGCCGTCGCGGTGTGCCGATTAACTCGCTGATGCTTTCCGGAGCGATCACTTCGCTGGTGGTGTTAATCAACTATCTGCTGCCGCAAAAAGCGT  >  NC_000913/602789‑603057

tAGCCCGTTTGTGATGATTTTCCATAATCTCGACAGCAACGTGGTAGCTTCTGCGCTGAACTTCGTCATTCTGGTAGCATCGCTGTCAGTGTATAACAGCGGGGTTTACTCTAACAGCCGCATGCTGTTTGGCCTTTAtg                                                                                                                                   >  1:1737778/1‑140 (MQ=255)

  gCCCGTTTGTGATGATTTTCCATAATCTCGACAGCAACGTGGTAGCTTCTGCGCTGAACTTCGTCATTCTGGTAGCATCGCTGTCAGTGTATAACAGCGGGGTTTACTCTAACAGCCGCATGCTGTTTGGCCTTTAtgtg                                                                                                                                 >  2:564825/1‑140 (MQ=255)

    ccGTTTGTGATGATTTTCCATAATCTCGACAGCAACGTGGTAGCTTCTGCGCTGAACTTCGTCATTCTGGTAGCATCGCTGTCAGTGTATAACAGCGGGGTTTACTCTAACAGCCGCATGCTGTTTGGCCTTTATGTGCa                                                                                                                               <  1:57617/140‑1 (MQ=255)

    ccGTTTGTGATGATTTTCCATAATCTCGACAGCAACGTGGTAGCTTCTGCGCTGAACTTCGTCATTCTGGTAGCATCGCTGTCAGTGTATAACAGCGGGGTTTACTCTAACAGCCGCATGCTGTTTGGCCTTTATGTGCa                                                                                                                               <  2:1934532/140‑1 (MQ=255)

     cGTTTGTGATGATTTTCCATAATCTCGACAGCAACGTGGTAGCTTCTGCGCTGAACTTCGTCATTCTGGTAGCATCGCTGTCAGTGTATAACAGCGGGGTTTACTCTAACAGCCGCATGCTGTTTGGCCTTTATGTGCAg                                                                                                                              >  1:82337/1‑140 (MQ=255)

     cGTTTGTGATGATTTTCCATAATCTCGACAGCAACGTGGTAGCTTCTGCGCTGAACTTCGTCATTCTGGTAGCATCGCTGTCAGTGTATAACAGCGGGGTTTACTCTAACAGCCGCATGCTGTTTGGCCTTTATGTGCAg                                                                                                                              >  1:1542524/1‑140 (MQ=255)

       tttGTGATGATTTTCCATAATCTCGACAGCAACGTGGTAGCTTCTGCGCTGAACTTCGTCATTCTGGTAGCATCGCTGTCAGTGTATAACAGCGGGGTTTACTCTAACAGCCGCATGCTGTTTGGCCTTTATGTGCAggg                                                                                                                            >  1:650468/1‑140 (MQ=255)

       tttGTGATGATTTTCCATAATCTCGACAGCAACGTGGTAGCTTCTGCGCTGAACTTCGTCATTCTGGTAGCATCGCTGTCAGTGTATAACAGCGGGGTTTACTCTAACAGCCGCATGCTGTTTGGCCTTTATGTGCAggg                                                                                                                            >  1:1228340/1‑140 (MQ=255)

       tttGTGATGATTTTCCATAATCTCGACAGCAACGTGGTAGCTTCTGCGCTGAACTTCGTCATTCTGGTAGCATCGCTGTCAGTGTATAACAGCGGGGTTTACTCTAACAGCCGCATGCTGTTTGGCCTTTATGTGCAggg                                                                                                                            >  2:447263/1‑140 (MQ=255)

        ttGTGATGATTTTCCATAATCTCGACAGCAACGTGGTAGCTTCTGCGCTGAACTTCGTCATTCTGGTAGCATCGCTGTCAGTGTATAACAGCGGGGTTTACTCTAACAGCCGCATGCTGTTTGGCCTTTATGTGCAGGGt                                                                                                                           >  1:1018988/1‑140 (MQ=255)

                  tttCCATAATCTCGACAGCAACGTGGTAGCTTCTGCGCTGAACTTCGTCATTCTGGTAGCATCGCTGTCAGTGTATAACAGCGGGGTTTACTCTAACAGCCGCATGCTGTTTGGCCTTTATGTGCAGGGTAATGCGCCGa                                                                                                                 >  1:995369/1‑140 (MQ=255)

                  tttCCATAATCTCGACAGCAACGTGGTAGCTTCTGCGCTGAACTTCGTCATTCTGGTAGCATCGCTGTCAGTGTATAACAGCGGGGTTTACTCTAACAGCCGCATGCTGTTTGGCCTTTATGTGCAGGGTAATGCGCCGa                                                                                                                 >  1:293196/1‑140 (MQ=255)

                   ttCCATAATCTCGACAGCAACGTGGTAGCTTCTGCGCTGAACTTCGTCATTCTGGTAGCATCGCTGTCAGTGTATAACAGCGGGGTTTACTCTAACAGCCGCATGCTGTTTGGCCTTTATGTGCAGGGTAATGCGCCGaa                                                                                                                >  2:719656/1‑140 (MQ=255)

                           tctcGACAGCAACGTGGTAGCTTCTGCGCTGAACTTCGTCATTCTGGTAGCATCGCTGTCAGTGTATAACAGCGGGGTTTACTCTAACAGCCGCATGCTGTTTGGCCTTTATGTGCAGGGTAATGCGCCGAAGTTTTTGa                                                                                                        >  1:903264/1‑140 (MQ=255)

                           tctcGACAGCAACGTGGTAGCTTCTGCGCTGAACTTCGTCATTCTGGTAGCATCGCTGTCAGTGTATAACAGCGGGGTTTACTCTAACAGCCGCATGCTGTTTGGCCTTTATGTGCAGGGTAATGCGCCGAAGTTTTTGa                                                                                                        <  2:1510185/140‑1 (MQ=255)

                              cGACAGCAACGTGGTAGCTTCTGCGCTGAACTTCGTCATTCTGGTAGCATCGCTGTCAGTGTATAACAGCGGGGTTTACTCTAACAGCCGCATGCTGTTTGGCCTTTATGTGCAGGGTAATGCGCCGAAGTTTTTGACTc                                                                                                     >  2:180064/1‑140 (MQ=255)

                               gACAGCAACGTGGTAGCTTCTGCGCTGAACTTCGTCATTCTGGTAGCATCGCTGTCAGTGTATAACAGCGGGGTTTACTCTAACAGCCGCATGCTGTTTGGCCTTTATGTGCAGGGTAATGCGCCGAAGTTTTTGACTcg                                                                                                    <  1:1570002/140‑1 (MQ=255)

                               gACAGCAACGTGGTAGCTTCTGCGCTGAACTTCGTCATTCTGGTAGCATCGCTGTCAGTGTATAACAGCGGGGTTTACTCTAACAGCCGCATGCTGTTTGGCCTTTATGTGCAGGGTAATGCGCCGAAGTTTTTGACTcg                                                                                                    >  1:1831064/1‑140 (MQ=255)

                               gACAGCAACGTGGTAGCTTCTGCGCTGAACTTCGTCATTCTGGTAGCATCGCTGTCAGTGTATAACAGCGGGGTTTACTCTAACAGCCGCATGCTGTTTGGCCTTTATGTGCAGGGTAATGCGCCGAAGTTTTTGACTcg                                                                                                    >  2:435045/1‑140 (MQ=255)

                                    cAACGTGGTAGCTTCTGCGCTGAACTTCGTCATTCTGGTAGCATCGCTGTCAGTGTATAACAGCGGGGTTTACTCTAACAGCCGCATGCTGTTTGGCCTTTATGTGCAGGGTAATGCGCCGAAGTTTTTGACTCGCGTCa                                                                                               >  1:948720/1‑140 (MQ=255)

                                    cAACGTGGTAGCTTCTGCGCTGAACTTCGTCATTCTGGTAGCATCGCTGTCAGTGTATAACAGCGGGGTTTACTCTAACAGCCGCATGCTGTTTGGCCTTTATGTGCAGGGTAATGCGCCGAAGTTTTTGACTCGCGTCa                                                                                               >  2:1544402/1‑140 (MQ=255)

                                        gTGGTAGCTTCTGCGCTGAACTTCGTCATTCTGGTAGCATCGCTGTCAGTGTATAACAGCGGGGTTTACTCTAACAGCCGCATGCTGTTTGGCCTTTATGTGCAGGGTAATGCGCCGAAGTTTTTGACTCGCGTCAGCCg                                                                                           <  2:650468/140‑1 (MQ=255)

                                         tGGTAGCTTCTGCGCTGAACTTCGTCATTCTGGTAGCATCGCTGTCAGTGTATAACAGCGGGGTTTACTCTAACAGCCGCATGCTGTTTGGCCTTTATGTGCAGGGTAATGCGCCGAAGTTTTTGACTCGCGTCAGCCGt                                                                                          >  2:1150497/1‑140 (MQ=255)

                                           gTAGCTTCTGCGCTGAACTTCGTCATTCTGGTAGCATCGCTGTCAGTGTATAACAGCGGGGTTTACTCTAACAGCCGCATGCTGTTTGGCCTTTATGTGCAGGGTAATGCGCCGAAGTTTTTGACTCGCGTCAGCCGTcg                                                                                        <  2:1018988/140‑1 (MQ=255)

                                            tAGCTTCTGCGCTGAACTTCGTCATTCTGGTAGCATCGCTGTCAGTGTATAACAGCGGGGTTTACTCTAACAGCCGCATGCTGTTTGGCCTTTATGTGCAGGGTAATGCGCCGAAGTTTTTGACTCGCGTCAGCCGTcgc                                                                                       <  1:447263/140‑1 (MQ=255)

                                             aGCTTCTGCGCTGAACTTCGTCATTCTGGTAGCATCGCTGTCAGTGTATAACAGCGGGGTTTACTCTAACAGCCGCATGCTGTTTGGCCTTTATGTGCAGGGTAATGCGCCGAAGTTTTTGACTCGCGTCAGCCGTcgcg                                                                                      <  1:180064/140‑1 (MQ=255)

                                             aGCTTCTGCGCTGAACTTCGTCATTCTGGTAGCATCGCTGTCAGTGTATAACAGCGGGGTTTACTCTAACAGCCGCATGCTGTTTGGCCTTTATGTGCAGGGTAATGCGCCGAAGTTTTTGACTCGCGTCAGCCGTcgcg                                                                                      <  2:1228340/140‑1 (MQ=255)

                                              gCTTCTGCGCTGAACTTCGTCATTCTGGTAGCATCGCTGTCAGTGTATAACAGCGGGGTTTACTCTAACAGCCGCATGCTGTTTGGCCTTTATGTGCAGGGTAATGCGCCGAAGTTTTTGACTCGCGTCAGCCGTCGCgg                                                                                     >  1:1754415/1‑140 (MQ=255)

                                              gCTTCTGCGCTGAACTTCGTCATTCTGGTAGCATCGCTGTCAGTGTATAACAGCGGGGTTTACTCTAACAGCCGCATGCTGTTTGGCCTTTATGTGCAGGGTAATGCGCCGAAGTTTTTGACTCGCGTCAGCCGTCGCgg                                                                                     >  1:503979/1‑140 (MQ=255)

                                               cTTCTGCGCTGAACTTCGTCATTCTGGTAGCATCGCTGTCAGTGTATAACAGCGGGGTTTACTCTAACAGCCGCATGCTGTTTGGCCTTTATGTGCAGGGTAATGCGCCGAAGTTTTTGACTCGCGTCAGCCGTCGCGgt                                                                                    <  2:903264/140‑1 (MQ=255)

                                                 tCTGCGCTGAACTTCGTCATTCTGGTAGCATCGCTGTCAGTGTATAACAGCGGGGTTTACTCTAACAGCCGCATGCTGTTTGGCCTTTATGTGCAGGGTAATGCGCCGAAGTTTTTGACTCGCGTCAGCCGTCGCGgtgt                                                                                  <  1:1150497/140‑1 (MQ=255)

                                                  cTGCGCTGAACTTCGTCATTCTGGTAGCATCGCTGTCAGTGTATAACAGCGGGGTTTACTCTAACAGCCGCATGCTGTTTGGCCTTTATGTGCAGGGTAATGCGCCGAAGTTTTTGACTCGCGTCAGCCGTCGCGGtgtg                                                                                 <  2:1542524/140‑1 (MQ=255)

                                                   tGCGCTGAACTTCGTCATTCTGGTAGCATCGCTGTCAGTGTATAACAGCGGGGTTTACTCTAACAGCCGCATGCTGTTTGGCCTTTATGTGCAGGGTAATGCGCCGAAGTTTTTGACTCGCGTCAGCCGTCGCGGTGTGc                                                                                >  2:1587943/1‑140 (MQ=255)

                                                       cTGGACTTCGTCATTCTGGTAGCATCGCTGTCAGTGTATAACAGCGGGGTTTACTCTAACAGCCGCATGCTGTTTGGCCTTTATGTGCAGGGTAATGCGCCGAAGTTTTTGACTCGCGTCAGCCGTCGCGGTGTGCCGAt                                                                            <  2:892004/140‑1 (MQ=255)

                                                          aaCTTCGTCATTCTGGTAGCATCGCTGTCAGTGTATAACAGCGGGGTTTACTCTAACAGCCGCATGCTGTTTGGCCTTTATGTGCAGGGTAATGCGCCGAAGTTTTTGACTCGCGTCAGCCGTCGCGGTGTGCCGATTaa                                                                         >  2:811733/1‑140 (MQ=255)

                                                                   aTTCTGGTAGCATCGCTGTCAGTGTATAACAGCGGGGTTTACTCTAACAGCCGCATGCTGTTTGGCCTTTATGTGCAGGGTAATGCGCCGAAGTTTTTGACTCGCGTCAGCCGTCGCGGTGTGCCGATTAACTCGCTGAt                                                                <  2:1737778/140‑1 (MQ=255)

                                                                   aTTCTGGTAGCATCGCTGTCAGTGTATAACAGCGGGGTTTACTCTAACAGCCGCATGCTGTTTGGCCTTTATGTGCAGGGTAATGCGCCGAAGTTTTTGACTCGCGTCAGCCGTCGCGGTGTGCCGATTAACTCGCTGAt                                                                <  1:890613/140‑1 (MQ=255)

                                                                         gTAGCATCGCTGTCAGTGTATAACAGCGGGGTTTACTCTAACAGCCGCATGCTGTTTGGCCTTTATGTGCAGGGTAATGCGCCGAAGTTTTTGACTCGCGTCAGCCGTCGCGGTGTGCCGATTAACTCGCTGATGCTTTc                                                          >  1:968504/1‑140 (MQ=255)

                                                                             cATCGCTGTCAGTGTATAACAGCGGGGTTTACTCTAACAGCCGCATGCTGTTTGGCCTTTATGTGCAGGGTAATGCGCCGAAGTTTTTGACTCGCGTCAGCCGTCGCGGTGTGCCGATTAACTCGCTGATGCTTTcc                                                         >  1:1910095/1‑137 (MQ=255)

                                                                             cATCGCTGTCAGTGTATAACAGCGGGGTTTACTCTAACAGCCGCATGCTGTTTGGCCTTTATGTGCAGGGTAATGCGCCGAAGTTTTTGACTCGCGTCAGCCGTCGCGGTGTGCCGATTAACTCGCTGATGCTTTcc                                                         <  2:1910095/137‑1 (MQ=255)

                                                                              aTCGCTGTCAGTGTATAACAGCGGGGTTTACTCTAACAGCCGCATGCTGTTTGGCCTTTATGTGCAGGGTAATGCGCCGAAGTTTTTGACTCGCGTCAGCCGTCGCGGTGTGCCGATTAACTCGCTGATGCTTTCCGGAg                                                     <  1:1544402/140‑1 (MQ=255)

                                                                               tCGCTGTCAGTGTATAACAGCGGGGTTTACTCTAACAGCCGCATGCTGTTTGGCCTTTATGTGCAGGGTAATGCGCCGAAGTTTTTGACTCGCGTCAGCCGTCGCGGTGTGCCGATTAACTCGCTGATGCTTTCCGGAGc                                                    >  2:832288/1‑140 (MQ=255)

                                                                               tCGCTGTCAGTGTATAACAGCGGGGTTTACTCTAACAGCCGCATGCTGTTTGGCCTTTATGTGCAGGGTAATGCGCCGAAGTTTTTGACTCGCGTCAGCCGTCGCGGTGTGCCGATTAACTCGCTGATGCTTTCCGGAGc                                                    >  2:520045/1‑140 (MQ=255)

                                                                               tCGCTGTCAGTGTATAACAGCGGGGTTTACTCTAACAGCCGCATGCTGTTTGGCCTTTATGTGCAGGGTAATGCGCCGAAGTTTTTGACTCGCGTCAGCCGTCGCGGTGTGCCGATTAACTCGCTGATGCTTTCCGGAGc                                                    <  1:435045/140‑1 (MQ=255)

                                                                               tCGCTGTCAGTGTATAACAGCGGGGTTTACTCTAACAGCCGCATGCTGTTTGGCCTTTATGTGCAGGGTAATGCGCCGAAGTTTTTGACTCGCGTCAGCCGTCGCGGTGTGCCGATTAACTCGCTGATGCTTTCCGGAGc                                                    >  2:824651/1‑140 (MQ=255)

                                                                                  cTGTCAGTGTATAACAGCGGGGTTTACTCTAACAGCCGCATGCTGTTTGGCCTTTATGTGCAGGGTAATGCGCCGAAGTTTTTGACTCGCGTCAGCCGTCGCGGTGTGCCGATTAACTCGCTGATGCTTTCCGGAGCGAt                                                 <  2:995369/140‑1 (MQ=255)

                                                                                        gtgtATAACAGCGGGGTTTACTCTAACAGCCGCATGCTGTTTGGCCTTTATGTGCAGGGTAATGCGCCGAAGTTTTTGACTCGCGTCAGCCGTCGCGGTGTGCCGATTAACTCGCTGATGCTTTCCGGAGCGATCACTTc                                           <  1:1231796/140‑1 (MQ=255)

                                                                                            ataACAGCGGGGTTTACTCTAACAGCCGCATGCTGTTTGGCCTTTATGTGCAGGGTAATGCGCCGAAGTTTTTGACTCGCGTCAGCCGTCGCGGTGTGCCGATTAACTCGCTGATGCTTTCCGGAGCGATCACTTCGCtg                                       >  2:764277/1‑140 (MQ=255)

                                                                                            ataACAGCGGGGTTTACTCTAACAGCCGCATGCTGTTTGGCCTTTATGTGCAGGGTAATGCGCCGAAGTTTTTGACTCGCGTCAGCCGTCGCGGTGTGCCGATTAACTCGCTGATGCTTTCCGGAGCGATCACTTCGCtg                                       >  1:341095/1‑140 (MQ=255)

                                                                                             taACAGCGGGGTTTACTCTAACAGCCGCATGCTGTTTGGCCTTTATGTGCAGGGTAATGCGCCGAAGTTTTTGACTCGCGTCAGCCGTCGCGGTGTGCCGATTAACTCGCTGATGCTTTCCGGAGCGATCACTTCGCtgg                                      <  2:991086/140‑1 (MQ=255)

                                                                                             taACAGCGGGGTTTACTCTAACAGCCGCATGCTGTTTGGCCTTTATGTGCAGGGTAATGCGCCGAAGTTTTTGACTCGCGTCAGCCGTCGCGGTGTGCCGATTAACTCGCTGATGCTTTCCGGAGCGATCACTTCGCtgg                                      <  1:1598804/140‑1 (MQ=255)

                                                                                             taACAGCGGGGTTTACTCTAACAGCCGCATGCTGTTTGGCCTTTATGTGCAGGGTAATGCGCCGAAGTTTTTGACTCGCGTCAGCCGTCGCGGTGTGCCGATTAACTCGCTGATGCTTTCCGGAGCGATCACTTCGCtgg                                      <  2:1346426/140‑1 (MQ=255)

                                                                                             taACAGCGGGGTTTACTCTAACAGCCGCATGCTGTTTGGCCTTTATGTGCAGGGTAATGCGCCGAAGTTTTTGACTCGCGTCAGCCGTCGCGGTGTGCCGATTAACTCGCTGATGCTTTCCGGAGCGATCACTTCGCtgg                                      <  2:1880431/140‑1 (MQ=255)

                                                                                                cAGCGGGGTTTACTCTAACAGCCGCATGCTGTTTGGCCTTTATGTGCAGGGTAATGCGCCGAAGTTTTTGACTCGCGTCAGCCGTCGCGGTGTGCCGATTAACTCGCTGATGCTTTCCGGAGCGATCACTTCGCtggtgg                                   <  1:1776615/140‑1 (MQ=255)

                                                                                                cAGCGGGGTTTACTCTAACAGCCGCATGCTGTTTGGCCTTTATGTGCAGGGTAATGCGCCGAAGTTTTTGACTCGCGTCAGCCGTCGCGGTGTGCCGATTAACTCGCTGATGCTTTCCGGAGCGATCACTTCGCtggtgg                                   <  2:1844982/140‑1 (MQ=255)

                                                                                                 aGCGGGGTTTACTCTAACAGCCGCATGCTGTTTGGCCTTTATGTGCAGGGTAATGCGCCGAAGTTTTTGACTCGCGTCAGCCGTCGCGGTGTGCCGATTAACTCGCTGATGCTTTCCGGAGCGATCACTTCGCTggtggt                                  >  2:974842/1‑140 (MQ=255)

                                                                                                   cGGGGTTTACTCTAACAGCCGCATGCTGTTTGGCCTTTATGTGCAGGGTAATGCGCCGAAGTTTTTGACTCGCGTCAGCCGTCGCGGTGTGCCGATTAACTCGCTGATGCTTTCCGGAGCGAt                                                 >  1:1227702/1‑123 (MQ=255)

                                                                                                   cGGGGTTTACTCTAACAGCCGCATGCTGTTTGGCCTTTATGTGCAGGGTAATGCGCCGAAGTTTTTGACTCGCGTCAGCCGTCGCGGTGTGCCGATTAACTCGCTGATGCTTTCCGGAGCGAt                                                 <  2:1227702/123‑1 (MQ=255)

                                                                                                   cGGGGTTTACTCTAACAGCCGCATGCTGTTTGGCCTTTATGTGCAGGGTAATGCGCCGAAGTTTTTGACTCGCGTCAGCCGTCGCGGTGTGCCGATTAACTCGCTGATGCTTTCCGGAGCGATCACTTc                                           >  2:378606/1‑129 (MQ=255)

                                                                                                   cGGGGTTTACTCTAACAGCCGCATGCTGTTTGGCCTTTATGTGCAGGGTAATGCGCCGAAGTTTTTGACTCGCGTCAGCCGTCGCGGTGTGCCGATTAACTCGCTGATGCTTTCCGGAGCGATCACTTc                                           <  1:378606/129‑1 (MQ=255)

                                                                                                   cGGGGTTTACTCTAACAGCCGCATGCTGTTTGGCCTTTATGTGCAGGGTAATGCGCCGAAGTTTTTGACTCGCGTCAGCCGTCGCGGTGTGCCGATTAACTCGCTGATGCTTTCCGGAGCGATCACTTCGCtggtgg                                   <  2:1770061/137‑1 (MQ=255)

                                                                                                   cGGGGTTTACTCTAACAGCCGCATGCTGTTTGGCCTTTATGTGCAGGGTAATGCGCCGAAGTTTTTGACTCGCGTCAGCCGTCGCGGTGTGCCGATTAACTCGCTGATGCTTTCCGGAGCGATCACTTCGCtggtgg                                   >  1:1770061/1‑137 (MQ=255)

                                                                                                   cGGGGTTTACTCTAACAGCCGCATGCTGTTTGGCCTTTATGTGCAGGGTAATGCGCCGAAGTTTTTGACTCGCGTCAGCCGTCGCGGTGTGCCGATTAACTCGCTGATGCTTTCCGGAGCGATCACTTCGCtgg                                      <  2:799773/134‑1 (MQ=255)

                                                                                                   cGGGGTTTACTCTAACAGCCGCATGCTGTTTGGCCTTTATGTGCAGGGTAATGCGCCGAAGTTTTTGACTCGCGTCAGCCGTCGCGGTGTGCCGATTAACTCGCTGATGCTTTCCGGAGCGATCACTTCGCtgg                                      >  1:799773/1‑134 (MQ=255)

                                                                                                   cGGGGTTTACTCTAACAGCCGCATGCTGTTTGGCCTTTATGTGCAGGGTAATGCGCCGAAGTTTTTGACTCGCGTCAGCCGTCGCGGTGTGCCGATTAACTCGCTGATGCTTTCCGGAGCGATCACTTCGCTGGTGgtgt                                >  1:257268/1‑140 (MQ=255)

                                                                                                   cGGGGTTTACTCTAACAGCCGCATGCTGTTTGGCCTTTATGTGCAGGGTAATGCGCCGAAGTTTTTGACTCGCGTCAGCCGTCGCGGTGTGCCGATTAACTCGCTGATGCTTTCCGGAGCGATCACTTCGCTGGTGgtgt                                >  1:1840286/1‑140 (MQ=255)

                                                                                                   cGGGGTTTACTCTAACAGCCGCATGCTGTTTGGCCTTTATGTGCAGGGTAATGCGCCGAAGTTTTTGACTCGCGTCAGCCGTCGCGGTGTGCCGATTAACTCGCTGATGCTTTCCGGAGCGATCACTTCGCTGGTGgtgt                                >  2:223843/1‑140 (MQ=255)

                                                                                                   cGGGGTTTACTCTAACAGCCGCATGCTGTTTGGCCTTTATGTGCAGGGTAATGCGCCGAAGTTTTTGACTCGCGTCAGCCGTCGCGGTGTGCCGATTAACTCGCTGATGCTTTCCGGAGCGATCACTTCGCTGGTGgtgt                                >  1:1620931/1‑140 (MQ=255)

                                                                                                   cGGGGTTTACTCTAACAGCCGCATGCTGTTTGGCCTTTATGTGCAGGGTAATGCGCCGAAGTTTTTGACTCGCGTCAGCCGTCGCGGTGTGCCGATTAACTCGCTGATGCTCTCCGGAGCGATCACTTCGCTGGTGgtgt                                >  1:32828/1‑140 (MQ=255)

                                                                                                   cGGGGTTTACTCTAACAGCCGCATGCTGTTTGGCC‑TTATGTGCAGGGTAATGCGCCGAAGTTTTTGACTCGCGTCAGCCGTCGCGGTGTGCCGATTAACTCGCTGATGCTTTCCGGAGCGATCACTTCGCTGGTGGTGtt                               >  1:1021796/1‑140 (MQ=255)

                                                                                                     gggTTTACTCTAACAGCCGCATGCTGTTTGGCCTTTATGTGCAGGGTAATGCGCCGAAGTTTTTGACTCGCGTCAGCCGTCGCGGTGTGCCGATTAACTCGCTGATGCTTTCCGGAGCGATCACTTCGCtgg                                      <  1:1607892/132‑1 (MQ=255)

                                                                                                     gggTTTACTCTAACAGCCGCATGCTGTTTGGCCTTTATGTGCAGGGTAATGCGCCGAAGTTTTTGACTCGCGTCAGCCGTCGCGGTGTGCCGATTAACTCGCTGATGCTTTCCGGAGCGATCACTTCGCtgg                                      >  2:1607892/1‑132 (MQ=255)

                                                                                                     gggTTTACTCTAACAGCCGCATGCTGTTTGGCCTTTATGTGCAGGGTAATGCGCCGAAGTTTTTGACTCGCGTCAGCCGTCGCGGTGTGCCGATTAACTCGCTGATGCTTTCCGGAGCGATCACTTCGCtgg                                      <  1:1383486/132‑1 (MQ=255)

                                                                                                     gggTTTACTCTAACAGCCGCATGCTGTTTGGCCTTTATGTGCAGGGTAATGCGCCGAAGTTTTTGACTCGCGTCAGCCGTCGCGGTGTGCCGATTAACTCGCTGATGCTTTCCGGAGCGATCACTTCGCtgg                                      >  2:1383486/1‑132 (MQ=255)

                                                                                                     gggTTTACTCTAACAGCCGCATGCTGTTTGGCCTTTATGTGCAGGGTAATGCGCCGAAGTTTTTGACTCGCGTCAGCCGTCGCGGTGTGCCGATTAACTCGCTGATGCTTTCCGGAGCGATCACTTCGCTGgtggtg                                 >  2:981044/1‑137 (MQ=255)

                                                                                                     gggTTTACTCTAACAGCCGCATGCTGTTTGGCCTTTATGTGCAGGGTAATGCGCCGAAGTTTTTGACTCGCGTCAGCCGTCGCGGTGTGCCGATTAACTCGCTGATGCTTTCCGGAGCGATCACTTCGCTGgtggtg                                 <  1:981044/137‑1 (MQ=255)

                                                                                                     gggTTTACTCTAACAGCCGCATGCTGTTTGGCCTTTATGTGCAGGGTAATGCGCCGAAGTTTTTGACTCGCGTCAGCCGTCGCGGTGTGCCGATTAACTCGCTGATGCTTTCCGGAGCGATCACTTCGCTGGTGGTGTTa                              >  1:860741/1‑140 (MQ=255)

                                                                                                     gggTTTACTCTAACAGCCGCATGCTGTTTGGCCTTTATGTGCAGGGTAATGCGCCGAAGTTTTTGACTCGCGTCAGCCGTCGCGGTGTGCCGATTAACTCGCTGATGCTTTCCGGAGCGATCACTTCGCTGGTGGTGTTa                              >  1:599766/1‑140 (MQ=255)

                                                                                                     gggTTTACTCTAACAGCCGCATGCTGTTTGGCCTTTATGTGCAGGGTAATGCGCCGAAGTTTTTGACTCGCGTCAGCCGTCGCGGTGTGCCGATTAACTCGCTGATGCTTTCCGGAGCGATCACTTCGCTGGTGGTGTTa                              <  2:293196/140‑1 (MQ=255)

                                                                                                     gggTTTACTCTAACAGCCGCATGCTGTTTGGCCTTTATGTGCAGGGTAATGCGCCGAAGTTTTTGACTCGCGTCAGCCGTCGCGGTGTGCCGATTAACTCGCTGATGCTTTCCGGAGCGATCACTTCGCTGGTGGTGTTa                              >  1:226674/1‑140 (MQ=255)

                                                                                                       gTTTACTCTAACAGCCGCATGCTGTTTGGCCTTTATGTGCAGGGTAATGCGCCGAAGTTTTTGACTCGCGTCAGCCGTCGCGGTGTGCCGATTAACTCGCTGATGCTTTCCGGAGCGATCACTTCGCTGgtggtg                                 >  1:891275/1‑135 (MQ=255)

                                                                                                       gTTTACTCTAACAGCCGCATGCTGTTTGGCCTTTATGTGCAGGGTAATGCGCCGAAGTTTTTGACTCGCGTCAGCCGTCGCGGTGTGCCGATTAACTCGCTGATGCTTTCCGGAGCGATCACTTCGCTGgtggtg                                 <  2:1575181/135‑1 (MQ=255)

                                                                                                       gTTTACTCTAACAGCCGCATGCTGTTTGGCCTTTATGTGCAGGGTAATGCGCCGAAGTTTTTGACTCGCGTCAGCCGTCGCGGTGTGCCGATTAACTCGCTGATGCTTTCCGGAGCGATCACTTCGCTGgtggtg                                 >  1:1575181/1‑135 (MQ=255)

                                                                                                       gTTTACTCTAACAGCCGCATGCTGTTTGGCCTTTATGTGCAGGGTAATGCGCCGAAGTTTTTGACTCGCGTCAGCCGTCGCGGTGTGCCGATTAACTCGCTGATGCTTTCCGGAGCGATCACTTCGCTGGTGGTGTTAAt                            <  1:1922359/140‑1 (MQ=255)

                                                                                                       gTTTACTCTAACAGCCGCATGCTGTTTGGCCTTTATGTGCAGGGTAATGCGCCGAAGTTTTTGACTCGCGTCAGCCGTCGCGGTGTGCCGATTAACTCGCTGATGCTTTCCGGAGCGATCACTTCGCTGGTGGTGTTAAt                            <  2:1754415/140‑1 (MQ=255)

                                                                                                        tttACTCTAACAGCCGCATGCTGTTTGGCCTTTATGTGCAGGGTAATGCGCCGAAGTTTTTGACTCGCGTCAGCCGTCGCGGTGTGCCGATTAACTCGCTGATGCTTTCCGGAGCGATCACTTCGCTGGTGGTGTTAATc                           >  2:78094/1‑140 (MQ=255)

                                                                                                                aaCAGCCGCATGCTGTTTGGCCTTTATGTGCAGGGTAATGCGCCGAAGTTTTTGACTCGCGTCAGCCGTCGCGGTGTGCCGATTAACTCGCTGATGCTTTCCGGAGCGATCACTTCGCTGGTGGTGTTAATCAACTATct                   >  2:1199360/1‑140 (MQ=255)

                                                                                                                 aCAGCCGCATGCTGTTTGGCCTTTATGTGCAGGGTAATGCGCCGAAGTTTTTGACTCGCGTCAGCCGTCGCGGTGTGCCGATTAACTCGCTGATGCTTTCCGGAGCGATCACTTCGCTGGTGGTGTTAATCAACTATctg                  >  2:1593875/1‑140 (MQ=255)

                                                                                                                     ccGCATGCTGTTTGGCCTTTATGTGCAGGGTAATGCGCCGAAGTTTTTGACTCGCGTCAGCCGTCGCGGTGTGCCGATTAACTCGCTGATGCTTTCCGGAGCGATCACTTCGCTGGTGGTGTTAATCAACTATCtgctgc              >  1:594626/1‑140 (MQ=255)

                                                                                                                       gCATGCTGTTTGGCCTTTATGTGCAGGGTAATGCGCCGAAGTTTTTGACTCGCGTCAGCCGTCGCGGTGTGCCGATTAACTCGCTGATGCTTTCCGGAGCGATCACTTCGCTGGTGGTGTTAATCAACTATCTGCTGCCg            >  1:1376363/1‑140 (MQ=255)

                                                                                                                        cATGCTGTTTGGCCTTTATGTGCAGGGTAATGCGCCGAAGTTTTTGACTCGCGTCAGCCGTCGCGGTGTGCCGATTAACTCGCTGATGCTTTCCGGAGCGATCACTTCGCTGGTGGTGTTAATCAACTATCTGCTGCCGc           >  2:1709977/1‑140 (MQ=255)

                                                                                                                         aTGCTGTTTGGCCTTTATGTGCAGGGTAATGCGCCGAAGTTTTTGACTCGCGTCAGCCGTCGCGGTGTGCCGATTAACTCGCTGATGCTTTCCGGAGCGATCACTTCGCTGGTGGTGTTAATCAACTATCTGCTGCCGCa          >  2:520082/1‑140 (MQ=255)

                                                                                                                         aTGCTGTTTGGCCTTTATGTGCAGGGTAATGCGCCGAAGTTTTTGACTCGCGTCAGCCGTCGCGGTGTGCCGATTAACTCGCTGATGCTTTCCGGAGCGATCACTTCGCTGGTGGTGTTAATCAACTATCTGCTGCCGCa          >  1:1951923/1‑140 (MQ=255)

                                                                                                                          tGCTGTTTGGCCTTTATGTGCAGGGTAATGCGCCGAAGTTTTTGACTCGCGTCAGCCGTCGCGGTGTGCCGATTAACTCGCTGATGCTTTCCGGAGCGATCACTTCGCTGGTGGTGTTAATCAACTATCTGCTGCCGCaa         >  2:934935/1‑140 (MQ=255)

                                                                                                                          tGCTGTTTGGCCTTTATGTGCAGGGTAATGCGCCGAAGTTTTTGACTCGCGTCAGCCGTCGCGGTGTGCCGATTAACTCGCTGATGCTTTCCGGAGCGATCACTTCGCTGGTGGTGTTAATCAACTATCTGCTGCCGCaa         <  1:811733/140‑1 (MQ=255)

                                                                                                                             tGTTTGGCCTTTATGTGCAGGGTAATGCGCCGAAGTTTTTGACTCGCGTCAGCCGTCGCGGTGTGCCGATTAACTCGCTGATGCTTTCCGGAGCGATCACTTCGCTGGTGGTGTTAATCAACTATCTGCTGCCGCaaaaa      >  2:1636963/1‑140 (MQ=255)

                                                                                                                             tGTTTGGCCTTTATGTGCAGGGTAATGCGCCGAAG‑TTTTGACTCGCGTCAGCCGTCGCGGTGTGCCGATTAACTCGCTGATGCTTTCCGGAGCGATCACTTCGCTGGTGGTGTTAATCAACTATCTGCTGCCGCAAAAAg     >  2:1942582/1‑140 (MQ=255)

                                                                                                                               tttGGCCTTTATGTGCAGGGTAATGCGCCGAAGTTTTTGACTCGCGTCAGCCGTCGCGGTGTGCCGATTAACTCGCTGATGCTTTCCGGAGCGATCACTTCGCTGGTGGTGTTAATCAACTATCTGCTGCCGCAAAAAGc    >  1:1951889/1‑140 (MQ=255)

                                                                                                                                 tGGCCTTTATGTGCAGGGTAATGCGCCGAAGTTTTTGACTCGCGTCAGCCGTCGCGGTGTGCCGATTAACTCGCTGATGCTTTCCGGAGCGATCACTTCGCTGGTGGTGTTAATCAACTATCTGCTGCCGCAAAAAGCGt  <  2:594626/140‑1 (MQ=255)

                                                                                                                                 tGGCCTTTATGTGCAGGGTAATGCGCCGAAGTTTTTGACTCGCGTCAGCCGTCGCGGTGTGCCGATTAACTCGCTGATGCTTTCCGGAGCGATCACTTCGCTGGTGGTGTTAATCAACTATCTGCTGCCGCAAAAAGCGt  <  1:407855/140‑1 (MQ=255)

TAGCCCGTTTGTGATGATTTTCCATAATCTCGACAGCAACGTGGTAGCTTCTGCGCTGAACTTCGTCATTCTGGTAGCATCGCTGTCAGTGTATAACAGCGGGGTTTACTCTAACAGCCGCATGCTGTTTGGCCTTTCTGTGCAGGGTAATGCGCCGAAGTTTTTGACTCGCGTCAGCCGTCGCGGTGTGCCGATTAACTCGCTGATGCTTTCCGGAGCGATCACTTCGCTGGTGGTGTTAATCAACTATCTGCTGCCGCAAAAAGCGT  >  NC_000913/602789‑603057

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`