| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,639,618 | C→A | G147V (GGA→GTA) | rrrQ ← | Qin prophage; putative lysozyme |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,639,618 | 0 | C | A | 99.2% | 461.2 / NA | 132 | G147V (GGA→GTA) | rrrQ | Qin prophage; putative lysozyme |
| Reads supporting (aligned to +/- strand): ref base C (0/1); major base A (77/53); minor base G (0/1); total (77/55) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.12e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 136 total aligned reads displayed.
ATAAATCCTGACAACACGAGAAAAATCACCATGAATATCTGATTCACTGTTCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGT‑‑‑CCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGCCAATGTTATAGGGACAAAATGACGCGATACCCGCTTT > NC_000913/1639481‑1639754 | aTAAATCCTGACAACACGAGAAAAATCACCATGAATATCTGATTCACTGTTCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGT‑‑‑ACg < 1:1323478/140‑1 (MQ=255)aTAAATCCTGACAACACGAGAAAAATCACCATGAATATCTGATTCACTGTTCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGT‑‑‑ACg > 2:1968912/1‑140 (MQ=255) aaaTCCTGACAACACGAGAAAAATCACCATGAATATCTGATTCACTGTTCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGT‑‑‑ACGcc < 1:1014363/140‑1 (MQ=255) acGAGAAAAATCACCATGAATATCTGATTCACTGTTCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGT‑‑‑ACGcc > 1:1161475/1‑127 (MQ=255) acGAGAAAAATCACCATGAATATCTGATTCACTGTTCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGT‑‑‑ACGCCATCCTTAATccac < 1:873123/140‑1 (MQ=255) acGAGAAAAATCACCATGAATATCTGATTCACTGTTCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGT‑‑‑ACGCCATCCTTAATccac > 2:1165497/1‑140 (MQ=255) agaAAAATCACCATGAATATCTGATTCACTGTTCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGT‑‑‑ACGCCATCCt < 1:445757/129‑1 (MQ=255) agaAAAATCACCATGAATATCTGATTCACTGTTCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGT‑‑‑ACGCCATCCt > 2:445757/1‑129 (MQ=255) aTCACCATGAATATCTGATTCACTGTTCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGT‑‑‑ACGCCATCCTTAATCCACCAGCGAATc > 1:1548343/1‑140 (MQ=255) aCCATGAATATCTGATTCACTGTTCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGT‑‑‑ACGCCATCCTTAATCCACCAGCGAATCGCt > 1:1134567/1‑140 (MQ=255) gAATATCTGATTCACTGTTCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGT‑‑‑ACGCCATCCTTAATCCACCAGCGAATCGCTTCGCa < 2:1750855/140‑1 (MQ=255) atatCTGATTCACTGTTCTATCCCCCATCAGGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTATCAGTTATTTGAACGAATGCTGCAATCGCGT‑‑‑GCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATg < 2:1117812/140‑1 (MQ=255) atatCTGATTCACTGTTCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGT‑‑‑ACGCCATCCTTAATCCACCAGCGAATCGCTTCGCATg < 2:1406845/140‑1 (MQ=255) atatCTGATTCACTGTTCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGT‑‑‑ACGCCATCCTTAATCCACCAGCGAATCGCTTCGCATg < 2:1304505/140‑1 (MQ=255) tCTGATTCACTGTTCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGTACGCCACCATCCTTAATCCACCAGCGAATCGCTTCGCATg < 2:407436/140‑1 (MQ=255) tGATTCACTGTTCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGT‑‑‑ACGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCt > 2:502884/1‑140 (MQ=255) tCACTGTTCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGT‑‑‑ACGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTAc > 2:537527/1‑140 (MQ=255) tCACTGTTCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGT‑‑‑ACGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTAc > 1:891163/1‑140 (MQ=255) tCACTGTTCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGT‑‑‑ACGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTAc > 1:1854250/1‑140 (MQ=255) tCACTGTTCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGT‑‑‑ACGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTAc > 1:66065/1‑140 (MQ=255) aCTGTTCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGT‑‑‑ACGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGa > 2:9626/1‑140 (MQ=255) cTGTTCTATCCACCAGCAGGGTAATGCGCTCTCCTGGACACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGT‑‑‑ACGCAATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGAt > 2:1140449/1‑140 (MQ=255) ttCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGT‑‑‑ACGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCAc > 1:1023320/1‑140 (MQ=255) ttCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGT‑‑‑ACGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCAc > 1:1168425/1‑140 (MQ=255) cTATCCCCCAGCAGGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGT‑‑‑ACGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCa > 1:110476/1‑140 (MQ=255) tCCCCCAGCAGGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGT‑‑‑ACGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCa > 2:1638491/1‑140 (MQ=255) tCCCCCAGCAGGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGT‑‑‑ACGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCa > 1:602133/1‑140 (MQ=255) cccAGCAGGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGT‑‑‑ACGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTc > 1:1861900/1‑140 (MQ=255) cagcagGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGT‑‑‑ACGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGAt > 1:1697295/1‑127 (MQ=255) cagcagGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGT‑‑‑ACGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGAt < 2:1697295/127‑1 (MQ=255) cagcagGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGT‑‑‑ACGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAg < 1:614834/140‑1 (MQ=255) cagcagGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGT‑‑‑ACGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAg > 1:1106315/1‑140 (MQ=255) cagcagGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGT‑‑‑ACGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAg > 2:563974/1‑140 (MQ=255) cagcagGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGT‑‑‑ACGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAg > 1:1522124/1‑140 (MQ=255) agcagGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGT‑‑‑ACGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGc < 1:1564359/140‑1 (MQ=255) agcagGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGT‑‑‑ACGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGc < 2:1854250/140‑1 (MQ=255) agcagGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGT‑‑‑ACGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGc < 1:1165497/140‑1 (MQ=255) agcagGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGT‑‑‑ACGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGc < 2:1861900/140‑1 (MQ=255) gcagGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGT‑‑‑ACGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGcc < 2:643341/140‑1 (MQ=255) gcagGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGT‑‑‑ACGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGcc < 2:743596/140‑1 (MQ=255) cagGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGT‑‑‑ACGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCg > 1:166755/1‑140 (MQ=255) cagGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGT‑‑‑ACGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCg > 2:8372/1‑140 (MQ=255) cagGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGT‑‑‑ACGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCg > 2:944226/1‑140 (MQ=255) ggTTAATGAGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGT‑‑‑ACGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCt > 1:1574807/1‑140 (MQ=255) gTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGT‑‑‑ACGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCtt > 2:542233/1‑140 (MQ=255) aaTGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGT‑‑‑ACGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTtata > 1:661491/1‑140 (MQ=255) tctcCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGT‑‑‑ACGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTc > 2:1334942/1‑140 (MQ=255) tctcCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGT‑‑‑ACGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTc > 1:1310802/1‑140 (MQ=255) tctcCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGT‑‑‑ACGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTc > 1:721917/1‑140 (MQ=255) tctcCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGT‑‑‑ACGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTc > 1:227137/1‑140 (MQ=255) ctcCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGT‑‑‑ACGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCg > 1:1723268/1‑140 (MQ=255) ctcCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGT‑‑‑ACGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCg < 2:1106315/140‑1 (MQ=255) ctcCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGT‑‑‑ACGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCg < 2:1638910/140‑1 (MQ=255) tcCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGT‑‑‑ACGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGa > 2:727067/1‑140 (MQ=255) ggTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGT‑‑‑ACGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACggg > 2:831271/1‑140 (MQ=255) ggTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGT‑‑‑ACGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACggg < 1:1968912/140‑1 (MQ=255) gTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGT‑‑‑ACGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGa < 2:1759878/140‑1 (MQ=255) gTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGT‑‑‑ACGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGa < 2:1137689/140‑1 (MQ=255) gTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGT‑‑‑ACGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGa > 2:811432/1‑140 (MQ=255) gacgaATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGT‑‑‑ACGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAacac > 2:1914464/1‑140 (MQ=255) gacgaATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGT‑‑‑ACGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAacac > 2:758943/1‑140 (MQ=255) gacgaATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGT‑‑‑ACGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAacac > 1:108256/1‑140 (MQ=255) gacgaATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGT‑‑‑ACGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAacac > 1:695189/1‑140 (MQ=255) gacgaATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGT‑‑‑ACGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAacac > 2:1194013/1‑140 (MQ=255) gacgaATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGT‑‑‑ACGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAacac > 1:247917/1‑140 (MQ=255) gacgaATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGT‑‑‑ACGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAacac > 1:432461/1‑140 (MQ=255) gacgaATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGT‑‑‑ACGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAacac > 1:906023/1‑140 (MQ=255) gacgaATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGT‑‑‑ACGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTAT‑AAACGTCGACGGGAAACACt > 1:420622/1‑140 (MQ=255) cgaATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGT‑‑‑ACGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACtt > 2:1838966/1‑140 (MQ=255) aTAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGT‑‑‑ACGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTAcc > 2:481789/1‑140 (MQ=255) tAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGT‑‑‑ACGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCg < 2:1087215/140‑1 (MQ=255) tAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGT‑‑‑ACGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCg > 1:672271/1‑140 (MQ=255) aCCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGT‑‑‑ACGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCggg < 2:345783/140‑1 (MQ=255) aCCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGT‑‑‑ACGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCggg < 1:929052/140‑1 (MQ=255) cTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGT‑‑‑ACGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGc < 2:672271/140‑1 (MQ=255) cTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGT‑‑‑ACGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGc < 1:502884/140‑1 (MQ=255) cTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGT‑‑‑ACGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGc < 1:1914464/140‑1 (MQ=255) cTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGT‑‑‑ACGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGc < 1:1905263/140‑1 (MQ=255) cTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGT‑‑‑ACGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGc < 2:1522124/140‑1 (MQ=255) cTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGT‑‑‑ACGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGc < 2:1310802/140‑1 (MQ=255) cTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGT‑‑‑ACGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGc < 2:1901950/140‑1 (MQ=255) cTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGT‑‑‑ACGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGc < 2:364453/140‑1 (MQ=255) tGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGT‑‑‑ACGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGcc < 1:1468419/140‑1 (MQ=255) tGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGT‑‑‑ACGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGcc < 2:1168425/140‑1 (MQ=255) gACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGT‑‑‑ACGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGCCa < 1:1895270/140‑1 (MQ=255) gACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGT‑‑‑ACGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGCCa < 1:481789/140‑1 (MQ=255) gACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGT‑‑‑ACGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGCCa < 2:695189/140‑1 (MQ=255) cGTAACAGTTATTTGAACGAATGCGGCAATCGCGT‑‑‑ACGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGCCAATg > 2:698161/1‑140 (MQ=255) aaCAGTTATTTGAACGAATGCGGCAATCGCGT‑‑‑ACGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGCCAATGTta > 1:1335350/1‑140 (MQ=255) aCAGTTATTTGAACGAATGCGGCAATCGCGT‑‑‑ACGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGCCAATGTtat < 2:1023320/140‑1 (MQ=255) cAGTTATTTGAACGAATGCGGCAATCGCGT‑‑‑ACGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGCCAATGTtata < 1:727067/140‑1 (MQ=255) tttGAACGAATGCGGCAATCGCGT‑‑‑ACGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGCCAATGTTATAGGGACa < 1:527648/140‑1 (MQ=255) tGAACGAATGCGGCAATCGCGT‑‑‑ACGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGCCAATGTTATAGGGACaaa > 2:1751278/1‑140 (MQ=255) tGAACGAATGCGGCAATCGCGT‑‑‑ACGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGCCAATGTTATAGGGACaaa > 2:262955/1‑140 (MQ=255) cGAATGCGGCAATCGCGT‑‑‑ACGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGCCAATGTTATAGGGACAAAATGa > 1:801751/1‑140 (MQ=255) gAATGCGGCAATCGCGT‑‑‑ACGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGCCAATGTTATAggg > 2:64852/1‑130 (MQ=255) gAATGCGGCAATCGCGT‑‑‑ACGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGCCAATGTTATAggg < 1:64852/130‑1 (MQ=255) ggCAATCGCGT‑‑‑ACGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGCCAATGTTATAGGGACAAAATGACGCGATa < 2:1134567/140‑1 (MQ=255) tCGCGT‑‑‑ACGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGCCAATGTTATAGGGACAAAATGACGCGATACCCGc > 1:680934/1‑140 (MQ=255) cgT‑‑‑ACGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGCCAATGTTATAGGGACAAAATGACGCGATACCCGCttt < 2:247917/140‑1 (MQ=255) | ATAAATCCTGACAACACGAGAAAAATCACCATGAATATCTGATTCACTGTTCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGT‑‑‑CCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGCCAATGTTATAGGGACAAAATGACGCGATACCCGCTTT > NC_000913/1639481‑1639754 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |