BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,344,166	G→T	R2R (CGG→AGG)	yfaL ←	putative autotransporter adhesin YfaL

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,344,166	0	G	T	100.0%	483.3 / NA	136	R2R (CGG→AGG)	yfaL	putative autotransporter adhesin YfaL
Reads supporting (aligned to +/- strand): ref base G (0/0); new base T (65/71); total (65/71)

Only 100 of 137 total aligned reads displayed.

CTGCTGGCCTGACAACTCGCTTTGACATCATATCCCTGGCATGAATCAGTGACCGCCGCGACACCGTTAGCAGAGAAAAGAGATGCAATCATTGACGGGAGTAAAGATAAATACTCCTTGCGTAGAAAGATAATCCGCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCATTATACGATATGGAATATCTTTCTTTTGTAAATTGTTCAACCCGGTGCAATGGCTATTTTGTTATTATTTGATG  >  NC_000913/2344030‑2344288

   ctgGCCTGACAACTCGCTTTGACATCATATCCCTGGCATGAATCAGTGACCGCCGCGACACCGTTAGCAGAGAAAAGAGATGCAATCATTGACGGGAGTAAAGATAAATACTCCTTGCGTAGAAAGATAATCCTCATAtt                                                                                                                      >  1:3067/1‑140 (MQ=255)

         tGACAACTCGCTTTGACATCATATCCCTGGCATGAATCAGTGACCGCCGCGACACCGTTAGCAGAGAAAAGAGATGCAATCATTGACGGGAGTAAAGATAAATACTCCTTGCGTAGAAAGATAATCCTCATATTAATCTa                                                                                                                >  1:484179/1‑140 (MQ=255)

                tCGCTTTGACATCATATCCCTGGCATGAATCAGTGACCGCCGCGACACCGTTAGCAGAGAAAAGAGATGCAATCATTGACGGGAGTAAAGATAAATACTCCTTGCGTAGAAAGATAATCCTCATATTAATCTAACcatca                                                                                                         >  1:1571380/1‑140 (MQ=255)

                  gCTTTGACATCATATCCCTGGCATGAATCAGTGACCGCCGCGACACCGTTAGCAGAGAAAAGAGATGCAATCATTGACGGGAGTAAAGATAAATACTCCTTGCGTAGAAAGATAATCCTCATATTAATCTAACCATCAtt                                                                                                       <  1:58274/140‑1 (MQ=255)

                  gCTTTGACATCATATCCCTGGCATGAATCAGTGACCGCCGCGACACCGTTAGCAGAGAAAAGAGATGCAATCATTGACGGGAGTAAAGATAAATACTCCTTGCGTAGAAAGATAATCCTCATATTAATCTAACCATCAtt                                                                                                       <  1:58476/140‑1 (MQ=255)

                            catATCCCTGGCATGAATCAGTGACCGCCGCGACACCGTTAGCAGAGAAAAGAGATGCAATCATTGACGGGAGTAAAGATAAATACTCCTTGCGTAGAAAGATAATCCTCATATTAATCTAACCATCATTTTCTATAAGa                                                                                             <  1:533116/140‑1 (MQ=255)

                              tatCCCTGGCATGAATCAGTGACCGCCGCGACACCGTTAGCAGAGAAAAGAGATGCAATCATTGACGGGAGTAAAGATAAATACTCCTTGCGTAGAAAGATAATCCTCATATTAATCTAACCATCATTTTCTATAAGACg                                                                                           <  2:675196/140‑1 (MQ=255)

                              tatCCCTGGCATGAATCAGTGACCGCCGCGACACCGTTAGCAGAGAAAAGAGATGCAATCATTGACGGGAGTAAAGATAAATACTCCTTGCGTAGAAAGATAATCCTCATATTAATCTAACCATCATTTTCTATAAGACg                                                                                           <  2:37080/140‑1 (MQ=255)

                               atCCCTGGCATGAATCAGTGACCGCCGCGACACCGTTAGCAGAGAAAAGAGATGCAATCATTGACGGGAGTAAAGATAAATACTCCTTGCGTAGAAAGATAATCCTCATATTAATCTAACCATCATTTTCTATAAGACgg                                                                                          <  2:621483/140‑1 (MQ=255)

                                tCCCTGGCATGAATCAGTGACCGCCGCGACACCGTTAGCAGAGAAAAGAGATGCAATCATTGACGGGAGTAAAGATAAATACTCCTTGCGTAGAAAGATAATCCTCATATTAATCTAACCATCATTTTCTATAAGACGGc                                                                                         <  2:3067/140‑1 (MQ=255)

                                    tGGCATGAATCAGTGACCGCCGCGACACCGTTAGCAGAGAAAAGAGATGCAATCATTGACGGGAGTAAAGATAAATACTCCTTGCGTAGAAAGATAATCCTCATATTAATCTAACCATCATTTTCTATAAGACGGCGTAt                                                                                     >  2:989854/1‑140 (MQ=255)

                                     ggCATGAATCAGTGACCGCCGCGACACCGTTAGCAGAGAAAAGAGATGCAATCATTGACGGGAGTAAAGATAAATACTCCTTGCGTAGAAAGATAATCCTCATATTAATCTAACCATCATTTTCTATAAGACg                                                                                           >  2:348527/1‑133 (MQ=255)

                                     ggCATGAATCAGTGACCGCCGCGACACCGTTAGCAGAGAAAAGAGATGCAATCATTGACGGGAGTAAAGATAAATACTCCTTGCGTAGAAAGATAATCCTCATATTAATCTAACCATCATTTTCTATAAGACGGCGTAtt                                                                                    >  1:275903/1‑140 (MQ=255)

                                      gCATGAATCAGTGACCGCCGCGACACCGTTAGCAGAGAAAAGAGATGCAATCATTGACGGGAGTAAAGATAAATACTCCTTGCGTAGAAAGATAATCCTCATATTAATCTAACCATCATTTTCTATAAGACg                                                                                           <  2:585154/132‑1 (MQ=255)

                                      gCATGAATCAGTGACCGCCGCGACACCGTTAGCAGAGAAAAGAGATGCAATCATTGACGGGAGTAAAGATAAATACTCCTTGCGTAGAAAGATAATCCTCATATTAATCTAACCATCATTTTCTATAAGACGGCGTAttt                                                                                   >  1:1004526/1‑140 (MQ=255)

                                      gCATGAATCAGTGACCGCCGCGACACCGTTAGCAGAGAAAAGAGATGCAATCATTGACGGGAGTAAAGATAAATACTCCTTGCGTAGAAAGATAATCCTCATATTAATCTAACCATCATTTTCTATAAGACGGCGTAttt                                                                                   >  1:908241/1‑140 (MQ=255)

                                      gCATGAATCAGTGACCGCCGCGACACCGTTAGCAGAGAAAAGAGATGCAATCATTGACGGGAGTAAAGATAAATACTCCTTGCGTAGAAAGATAATCCTCATATTAATCTAACCATCATTTTCTATAAGACGGCGTAttt                                                                                   >  2:626047/1‑140 (MQ=255)

                                      gCATGAATCAGTGACCGCCGCGACACCGTTAGCAGAGAAAAGAGATGCAATCATTGACGGGAGTAAAGATAAATACTCCTTGCGTAGAAAGATAATCCTCATATTAATCTAACCATCATTTTCTATAAGACGGCGTAttt                                                                                   >  1:108436/1‑140 (MQ=255)

                                      gCATGAATCAGTGACCGCCGCGACACCGTTAGCAGAGAAAAGAGATGCAATCATTGACGGGAGT‑AAGATAAATACTCCTTGCGTAGAAAGATAATCCTCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTa                                                                                  >  1:1592833/1‑140 (MQ=255)

                                       cATGAATCAGTGACCGCCGCGACACCGTTAGCAGAGAAAAGAGATGCAATCATTGACGGGAGTAAAGATAAATACTCCTTGCGTAGAAAGATAATCCTCATATTAATCTAACCATCATTTTCTATAAGa                                                                                             >  1:1034345/1‑129 (MQ=255)

                                       cATGAATCAGTGACCGCCGCGACACCGTTAGCAGAGAAAAGAGATGCAATCATTGACGGGAGTAAAGATAAATACTCCTTGCGTAGAAAGATAATCCTCATATTAATCTAACCATCATTTTCTATAAGa                                                                                             <  2:1034345/129‑1 (MQ=255)

                                        aTGAATCAGTGACCGCCGCGACACCGTTAGCAGAGAAAAGAGATGCAATCATTGACGGGAGTAAAGATAAATACTCCTTGCGTAGAAAGATAATCCTCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTaa                                                                                 <  2:187805/140‑1 (MQ=255)

                                        aTGAATCAGTGACCGCCGCGACACCGTTAGCAGAGAAAAGAGATGCAATCATTGACGGGAGTAAAGATAAATACTCCTTGCGTAGAAAGATAATCCTCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTaa                                                                                 <  1:1649503/140‑1 (MQ=255)

                                           aaTCAGTGACCGCCGCGACACCGTTAGCAGAGAAAAGAGATGCAATCATTGACGGGAGTAAAGATAAATACTCCTTGCGTAGAAAGATAATCCTCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCg                                                                              <  2:108436/140‑1 (MQ=255)

                                           aaTCAGTGACCGCCGCGACACCGTTAGCAGAGAAAAGAGATGCAATCATTGACGGGAGTAAAGATAAATACTCCTTGCGTAGAAAGATAATCCTCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCg                                                                              <  1:166310/140‑1 (MQ=255)

                                           aaTCAGTGACCGCCGCGACACCGTTAGCAGAGAAAAGAGATGCAATCATTGACGGGAGTAAAGATAAATACTCCTTGCGTAGAAAGATAATCCTCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCg                                                                              >  1:998198/1‑140 (MQ=255)

                                           aaTCAGTGACCGCCGCGACACCGTTAGCAGAGAAAAGAGATGCAATCATTGACGGGAGTAAAGATAAATACTCCTTGCGTAGAAAGATAATCCTCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCg                                                                              <  1:1245433/140‑1 (MQ=255)

                                             tCAGTGACCGCCGCGACACCGTTAGCAGAGAAAAGAGATGCAATCATTGACGGGAGTAAAGATAAATACTCCTTGCGTAGAAAGATAATCCTCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCa                                                                            <  2:651017/140‑1 (MQ=255)

                                             tCAGTGACCGCCGCGACACCGTTAGCAGAGAAAAGAGATGCAATCATTGACGGGAGTAAAGATAAATACTCCTTGCGTAGAAAGATAATCCTCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCa                                                                            <  1:288111/140‑1 (MQ=255)

                                                gTGACCGCCGCGACACCGTTAGCAGAGAAAAGAGATGCAATCATTGACGGGAGTAAAGATAAATACTCCTTGCGTAGAAAGATAATCCTCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCATta                                                                         >  1:60648/1‑140 (MQ=255)

                                                 tGACCGCCGCGACACCGTTAGCAGAGAAAAGAGATGCAATCATTGACGGGAGTAAAGATAAATACTCCTTGCGTAGAAAGATAATCCTCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCATtat                                                                        >  2:652185/1‑140 (MQ=255)

                                                 tGACCGCCGCGACACCGTTAGCAGAGAAAAGAGATGCAATCATTGACGGGAGTAAAGATAAATACTCCTTGCGTAGAAAGATAATCCTCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCATtat                                                                        >  1:1585909/1‑140 (MQ=255)

                                                  gACCGCCGCGACACCGTTAGCAGAGAAAAGAGATGCAATCATTGACGGGAGTAAAGATAAATACTCCTTGCGTAGAAAGATAATCCTCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCATtata                                                                       <  1:652568/140‑1 (MQ=255)

                                                  gACCGCCGCGACACCGTTAGCAGAGAAAAGAGATGCAATCATTGACGGGAGTAAAGATAAATACTCCTTGCGTAGAAAGATAATCCTCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCATtata                                                                       <  2:908241/140‑1 (MQ=255)

                                                  gACCGCCGCGACACCGTTAGCAGAGAAAAGAGATGCAATCATTGACGGGAGTAAAGATAAATACTCCTTGCGTAGAAAGATAATCCTCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCATtata                                                                       <  2:60648/140‑1 (MQ=255)

                                                  gACCGCCGCGACACCGTTAGCAGAGAAAAGAGATGCAATCATTGACGGGAGTAAAGATAAATACTCCTTGCGTAGAAAGATAATCCTCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCATtata                                                                       <  2:998198/140‑1 (MQ=255)

                                                  gACCGCCGCGACACCGTTAGCAGAGAAAAGAGATGCAATCATTGACGGGAGTAAAGATAAATACTCCTTGCGTAGAAAGATAATCCTCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCATtata                                                                       <  1:1068583/140‑1 (MQ=255)

                                                    ccgccgCGACACCGTTATCAGAGAAAAGAGATGCAATCATTGACGGGAGTAAAGATAAATACTCCTTGCGTAGAAAGATAATCCTCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCATTATACg                                                                     <  1:232521/140‑1 (MQ=255)

                                                    ccgccgCGACACCGTTAGCAGAGAAAAGAGATGCAATCATTGACGGGAGTAAAGATAAATACTCCTTGCGTAGAAAGATAATCCTCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCATTATACg                                                                     <  2:832471/140‑1 (MQ=255)

                                                     cgccgcGACACCGTTAGCAGAGAAAAGAGATGCAATCATTGACGGGAGTAAAGATAAATACTCCTTGCGTAGAAAGATAATCCTCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCATTATACGa                                                                    >  1:1277701/1‑140 (MQ=255)

                                                      gccgcGACACCGTTAGCAGAGAAAAGAGATGCAATCATTGACGGGAGTAAAGATAAATACTCCTTGCGTAGAAAGATAATCCTCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCATTATACGat                                                                   <  1:379554/140‑1 (MQ=255)

                                                      gccgcGACACCGTTAGCAGAGAAAAGAGATGCAATCATTGACGGGAGTAAAGATAAATACTCCTTGCGTAGAAAGATAATCCTCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCATTATACGat                                                                   <  1:1600336/140‑1 (MQ=255)

                                                       ccgcGACACCGTTAGCAGAGAAAAGAGATGCAATCATTGACGGGAGTAAAGATAAATACTCCTTGCGTAGAAAGATAATCCTCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCATTATACGata                                                                  <  1:626047/140‑1 (MQ=255)

                                                                   tAGCAGAGAAAAGAGATGCAATCATTGACGGGAGTAAAGATAAATACTCCTTGCGTAGAAAGATAATCCTCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCATTATACGATATGGAATAtcttt                                                      <  2:1277701/140‑1 (MQ=255)

                                                                    aGCAGAGAAAAGAGATGCAATCATTGACGGGAGTAAAGATAAATACTCCTTGCGTAGAAAGATAATCCTCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCATTATACGat                                                                   >  1:1097686/1‑126 (MQ=255)

                                                                          gaAAAGAGATGCAATCATTGACGGGAGTAAAGATAAATACTCCTTGCGTAGAAAGATAATCCTCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCATTATACGATATGGAATATCTTTCTTTTGt                                               >  1:93466/1‑140 (MQ=255)

                                                                           aaaaGAGATGCAATCATTGACGGGAGTAAAGATAAATACTCCTTGCGTAGAAAGATAATCCTCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCATTATACGATATGGAATATCTTTCTTTTGTa                                              >  2:223700/1‑140 (MQ=255)

                                                                           aaaaGAGATGCAATCATTGACGGGAGTAAAGATAAATACTCCTTGCGTAGAAAGATAATCCTCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCATTATACGATATGGAATATCTTTCTTTTGTa                                              >  1:737486/1‑140 (MQ=255)

                                                                           aaaaGAGATGCAATCATTGACGGGAGTAAAGATAAATACTCCTTGCGTAGAAAGATAATCCTCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCATTATACGATATGGAATATCTTTCTTTTGTa                                              >  2:1348317/1‑140 (MQ=255)

                                                                           aaaaGAGATGCAATCATTGACGGGAGTAAAGATAAATACTCCTTGCGTAGAAAGATAATCCTCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCATTATACGATATGGAATATCTTTCTTTTGTa                                              >  1:1601071/1‑140 (MQ=255)

                                                                             aaGAGATGCAATCATTGACGGGAGTAAAGATAAATACTCCTTGCGTAGAAAGATAATCCTCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCATTATACGATATGGAATATCTTTCTTTTGTaaa                                            <  2:737486/140‑1 (MQ=255)

                                                                             aaGAGATGCAATCATTGACGGGAGTAAAGATAAATACTCCTTGCGTAGAAAGATAATCCTCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCATTATACGATATGGAATATCTTTCTTTTGTaaa                                            <  1:1170626/140‑1 (MQ=255)

                                                                                  aTGCAATCATTGACGGGAGTAAAGATAAATACTCCTTGCGTAGAAAGATAATCCTCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCATTATACGATATGGAATATCTTTCTTTTGTAAATTGtt                                       <  2:1004526/140‑1 (MQ=255)

                                                                                  aTGCAATCATTGACGGGAGTAAAGATAAATACTCCTTGCGTAGAAAGATAATCCTCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCATTATACGATATGGAATATCTTTCTTTTGTAAATTGtt                                       <  1:128224/140‑1 (MQ=255)

                                                                                   tGCAATCATTGACGGGAGTAAAGATAAATACTCCTTGCGTAGAAAGATAATCCTCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCATTATACGATATGGAATAtcttt                                                      >  1:1344672/1‑124 (MQ=255)

                                                                                   tGCAATCATTGACGGGAGTAAAGATAAATACTCCTTGCGTAGAAAGATAATCCTCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCATTATACGATATGGAATAtcttt                                                      <  2:1344672/124‑1 (MQ=255)

                                                                                     cAATCATTGACGGGAGTAAAGATAAATACTCCTTGCGTAGAAAGATAATCCTCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCATTATACGATATGGAATATCTTTCTTTTGTAAATTGTTCaa                                    >  1:824970/1‑140 (MQ=255)

                                                                                       aTCATTGACGGGAGTAAAGATAAATACTCCTTGCGTAGAAAGATAATCCTCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCATTATACGATATGGAATATCTTTCTTTTGTAAATTGTTCAAcc                                  <  2:1553898/140‑1 (MQ=255)

                                                                                            tGACGGGAGTAAAGATAAATACTCCTTGCGTAGAAAGATAATCCTCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCATTATACGATATGGAATATCTTTCTTTTGTAAATTGTTCAACCCGGTg                             >  2:388193/1‑140 (MQ=255)

                                                                                               cGGGAGTAAAGATAAATACTCCTTGCGTAGAAAGATAATCCTCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCATTATACGATATGGAATATCTTTCTTTTGTAAATTGTTCAACCCGGTGCaa                          <  1:152878/140‑1 (MQ=255)

                                                                                                       aaGATAAATACTCCTTGCGTAGAAAGATAATCCTCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCATTATACGATATGGAATATCTTTCTTTTGTAAATTGTTCAACCCGGTGCAATGGCTAtt                  <  1:989854/140‑1 (MQ=255)

                                                                                                           tAAATACTCCTTGCGTAGAAAGATAATCCTCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCATTATACGATATGGAATATCTTTCTTTTGTAAATTGTTCAACCCGGTGCAATGGCTATTTTGt              <  2:1148695/140‑1 (MQ=255)

                                                                                                            aaaTACTCCTTGCGTAGAAAGATAATCCTCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCATTATACGATATGGAATATCTTTCTTTTGTAAATTGTTCAACCCGGTGCAATGGCTATTTTGtt             >  1:926476/1‑140 (MQ=255)

                                                                                                             aaTACTCCTTGCGTAGAAAGATAATCCTCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCATTATACGATATGGAATATCTTTCTTTTGTAAATTGTTCAACCCGGTGCAATGGCTATTTTGtta            >  2:834299/1‑140 (MQ=255)

                                                                                                               tACTCCTTGCGTAGAAAGATAATCCTCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCATTATACGATATGGAATATCTTTCTTTTGTAAATTGTTCAACCCGGTGCAATGGCTATTTTGttatt          >  1:1354027/1‑140 (MQ=255)

                                                                                                               tACTCCTTGCGTAGAAAGATAATCCTCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCATTATACGATATGGAATATCTTTCTTTTGTAAATTGTTCAACCCGGTGCAATGGCTATTTTGttatt          <  2:1634553/140‑1 (MQ=255)

                                                                                                                 cTCCTTGCGTAGAAAGATAATCCTCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCATTATATGATATGGAATATCTTTCTTTTGTAAATTGTTCAACCCGGTGCAATGGCTATTTTGTtattat        <  1:1499050/140‑1 (MQ=255)

                                                                                                                    cTTGCGTAGAAAGATAATCCTCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCATTATACGATATGGAATATCTTTCTTTTGTAAATTGTTCAACCCGGTGCAATGGCTATTTTGTTATTATTtg     <  2:458953/140‑1 (MQ=255)

                                                                                                                    cTTGCGTAGAAAGATAATCCTCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCATTATACGATATGGAATATCTTTCTTTTGTAAATTGTTCAACCCGGTGCAATGGCTATTTTGTTATTATTtg     >  2:1592787/1‑140 (MQ=255)

                                                                                                                    cTTGCGTAGAAAGATAATCCTCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCATTATACGATATGGAATATCTTTCTTTTGTAAATTGTTCAACCCGGTGCAATGGCTATTTTGTTATTATTtg     >  1:1262157/1‑140 (MQ=255)

                                                                                                                    cTTGCGTAGAAAGATAATCCTCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCATTATACGATATGGAATATCTTTCTTTTGTAAATTGTTCAACCCGGTGCAATGGCTATTTTGTTATTATTtg     >  2:560138/1‑140 (MQ=255)

                                                                                                                    cTTGCGTAGAAAGATAATCCTCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCATTATACGATATGGAATATCTTTCTTTTGTAAATTGTTCAACCCGGTGCAATGGCTATTTTGTTATTATTtg     >  2:1481204/1‑140 (MQ=255)

                                                                                                                    cTTGCGTAGAAAGATAATCCTCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCATTATACGATATGGAATATCTTTCTTTTGTAAATTGTTCAACCCGGTGCAATGGCTATTTTGTTATTATTtg     >  1:1390411/1‑140 (MQ=255)

                                                                                                                    cTTGCGTAGAAAGATAATCCTCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCATTATACGATATGGAATATCTTTCTTTTGTAAATTGTTCAACCCGGTGCAATGGCTATTTTGTTATTATTtg     >  2:587827/1‑140 (MQ=255)

                                                                                                                    cTTGCGTAGAAAGATAATCCTCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCATTATACGATATGGAATATCTTTCTTTTGTAAATTGTTCAACCCGGTGCAATGGCTATTTTGTTATTATTtg     <  2:1052309/140‑1 (MQ=255)

                                                                                                                     ttGCGTAGAAAGATAATCCTCATATTAATCTACCCATTATCTTCTACAAGACGGCGTATTTAATCGAATTATACGATATGTAATATCTTTCTGTTGTAAATTGTTCATTCCGGTGCGATGGCTATTTTGTTATTATTtga    <  2:1528791/140‑1 (MQ=255)

                                                                                                                     ttGCGTAGAAAGATAATCCTCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCATTATACGATATGGAATATCTTTCTTTTGTAAATTGTTCAACCCGGTGCAATGGCTATTTTGTTATTATTtga    <  2:849672/140‑1 (MQ=255)

                                                                                                                     ttGCGTAGAAAGATAATCCTCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCATTATACGATATGGAATATCTTTCTTTTGTAAATTGTTCAACCCGGTGCAATGGCTATTTTGTTATTATTtga    <  2:1561293/140‑1 (MQ=255)

                                                                                                                     ttGCGTAGAAAGATAATCCTCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCATTATACGATATGGAATATCTTTCTTTTGTAAATTGTTCAACCCGGTGCAATGGCTATTTTGTTATTATTtga    <  2:1354027/140‑1 (MQ=255)

                                                                                                                     ttGCGTAGAAAGATAATCCTCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCATTATACGATATGGAATATCTTTCTTTTGTAAATTGTTCAACCCGGTGCAATGGCTATTTTGTTATTATTtga    <  2:1262157/140‑1 (MQ=255)

                                                                                                                     ttGCGTAGAAAGATAATCCTCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCATTATACGATATGGAATATCTTTCTTTTGTAAATTGTTCAACCCGGTGCAATGGCTATTTTGTTATTATTtga    <  1:223700/140‑1 (MQ=255)

                                                                                                                     ttGCGTAGAAAGATAATCCTCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCATTATACGATATGGAATATCTTTCTTTTGTAAATTGTTCAACCCGGTGCAATGGCTATTTTGTTATTATTtga    <  2:93466/140‑1 (MQ=255)

                                                                                                                     ttGCGTAGAAAGATAATCCTCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCATTATACGATATGGAATATCTTTCTTTTGTAAATTGTTCAACCCGGTGCAATGGCTATTTTGTTATTATTtga    <  1:712330/140‑1 (MQ=255)

                                                                                                                      tGCGTAGAAAGATAATCCTCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCATTATACGATATGGAATATCTTTCTTTTGTAAATTGTTCAACCCGGTGCAATGGCTATTTTGTTATTATTtgat   >  2:507999/1‑140 (MQ=255)

                                                                                                                      tGCGTAGAAAGATAATCCTCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCATTATACGATATGGAATATCTTTCTTTTGTAAATTGTTCAACCCGGTGCAATGGCTATTTTGTTATTATTtgat   >  2:1107294/1‑140 (MQ=255)

                                                                                                                      tGCGTAGAAAGATAATCCTCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCATTATACGATATGGAATATCTTTCTTTTGTAAATTGTTCAACCCGGTGCAATGGCTATTTTGTTATTATTtga    >  2:1646487/1‑139 (MQ=255)

                                                                                                                      tGCGTAGAAAGATAATCCTCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCATTATACGATATGGAATATCTTTCTTTTGTAAATTGTTCAACCCGGTGCAATGGCTATTTTGTTATTATTtga    <  1:1646487/139‑1 (MQ=255)

                                                                                                                      tGCGTAGAAAGATAATCCTCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCATTATACGATATGGAATATCTTTCTTTTGTAAATTGTTCAACCCGGTGCAATGGCTATTTTGTTATTATTtga    >  1:69275/1‑139 (MQ=255)

                                                                                                                      tGCGTAGAAAGATAATCCTCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCATTATACGATATGGAATATCTTTCTTTTGTAAATTGTTCAACCCGGTGCAATGGCTATTTTGTTATTATTtga    <  2:69275/139‑1 (MQ=255)

                                                                                                                       gCGTAGAAAGATAATCCTCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCATTATACGATATGGAATATCTTTCTTTTGTAAATTGTTCAACCCGGTGCAATGGCTATTTTGTTATTATTtgatg  <  2:824970/140‑1 (MQ=255)

                                                                                                                       gCGTAGAAAGATAATCCTCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCATTATACGATATGGAATATCTTTCTTTTGTAAATTGTTCAACCCGGTGCAATGGCTATTTTGTTATTATTtgatg  <  2:1587254/140‑1 (MQ=255)

                                                                                                                       gCGTAGAAAGATAATCCTCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCATTATACGATATGGAATATCTTTCTTTTGTAAATTGTTCAACCCGGTGCAATGGCTATTTTGTTATTATTtgatg  >  1:1022485/1‑140 (MQ=255)

                                                                                                                       gCGTAGAAAGATAATCCTCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCATTATACGATATGGAATATCTTTCTTTTGTAAATTGTTCAACCCGGTGCAATGGCTATTTTGTTATTATTtgatg  <  2:1592833/140‑1 (MQ=255)

                                                                                                                       gCGTAGAAAGATAATCCTCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCATTATACGATATGGAATATCTTTCTTTTGTAAATTGTTCAACCCGGTGCAATGGCTATTTTGTTATTATTtgatg  <  1:507999/140‑1 (MQ=255)

                                                                                                                       gCGTAGAAAGATAATCCTCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCATTATACGATATGGAATATCTTTCTTTTGTAAATTGTTCAACCCGGTGCAATGGCTATTTTGTTATTATTtgatg  <  1:834299/140‑1 (MQ=255)

                                                                                                                       gCGTAGAAAGATAATCCTCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCATTATACGATATGGAATATCTTTCTTTTGTAAATTGTTCAACCCGGTGCAATGGCTATTTTGTTATTATTtgatg  <  1:388193/140‑1 (MQ=255)

                                                                                                                       gCGTAGAAAGATAATCCTCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCATTATACGATATGGAATATCTTTCTTTTGTAAATTGTTCAACCCGGTGCAATGGCTATTTTGTTATTATTtgatg  <  1:44807/140‑1 (MQ=255)

                                                                                                                       gCGTAGAAAGATAATCCTCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCATTATACGATATGGAATATCTTTCTTTTGTAAATTGTTCAACCCGGTGCAATGGCTATTTTGTTATTATTtga    >  2:111970/1‑138 (MQ=255)

                                                                                                                                  tAATCCTCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCATTATACGATATGGAATATCTTTCTTTTGTAAATTGTTCAACCCGGTGCAATGGCTCTTTTGTTATTATTtga    <  2:1496857/127‑1 (MQ=255)

                                                                                                                                  tAATCCTCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCATTATACGATATGGAATATCTTTCTTTTGTAAATTGTTCAACCCGGTGCAATGGCTATTTTGTTATTATTtga    >  1:1496857/1‑127 (MQ=255)

CTGCTGGCCTGACAACTCGCTTTGACATCATATCCCTGGCATGAATCAGTGACCGCCGCGACACCGTTAGCAGAGAAAAGAGATGCAATCATTGACGGGAGTAAAGATAAATACTCCTTGCGTAGAAAGATAATCCGCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCATTATACGATATGGAATATCTTTCTTTTGTAAATTGTTCAACCCGGTGCAATGGCTATTTTGTTATTATTTGATG  >  NC_000913/2344030‑2344288

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`