BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,456,193	T→C	intergenic (‑547/+134)	yfcV ← / ← sixA	putative fimbrial protein YfcV/phosphohistidine phosphatase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,456,193	0	T	C	100.0%	666.1 / NA	169	intergenic (‑547/+134)	yfcV/sixA	putative fimbrial protein YfcV/phosphohistidine phosphatase
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (72/97); total (72/97)

Only 100 of 172 total aligned reads displayed.

ATTACGTCCTGCCTGATTATTCAACTCTATTTTCTCCATTATCTGTATTAATAAATGATAATGAGTGTCAAACAGACATTATTCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTTCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGAGTCTTCGATAGTAGTGAGGTTGACAGATATCCGCTGCCTGATGAGCAATTATGCCCAATGAATCTACCTCATTGGGCATAATTTGGAACTCATC  >  NC_000913/2456058‑2456328

aTTACGTCCTGCCTGATTATTCAACTCTATTTTCTCCATTATCTGTATTAATAAATGATAATGAGTGTCAAACAGACATTATTCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTCCCGa                                                                                                                                     >  2:340121/1‑140 (MQ=255)

aTTACGTCCTGCCTGATTATTCAACTCTATTTTCTCCATTATCTGTATTAATAAATGATAATGAGTGTCAAACAGACATTATTCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTCCCGa                                                                                                                                     <  1:1173589/140‑1 (MQ=255)

  tACGTCCTGCCTGATTATTCAACTCTATTTTCTCCATTATCTGTATTAATAAATGATAATGAGTGTCAAACAGACATTATTCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTCCCGAAt                                                                                                                                   <  1:340121/140‑1 (MQ=255)

   aCGTCCTGCCTGATTATTCAACTCTATTTTCTCCATTATCTGTATTAATAAATGATAATGAGTGTCAAACAGACATTATTCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTCCCGAATg                                                                                                                                  <  2:1538846/140‑1 (MQ=255)

   aCGTCCTGCCTGATTATTCAACTCTATTTTCTCCATTATCTGTATTAATAAATGATAATGAGTGTCAAACAGACATTATTCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTCCCGAATg                                                                                                                                  <  2:1530833/140‑1 (MQ=255)

    cGTCCTGCCTGATTATTCAACTCTATTTTCTCCATTATCTGTATTAATAAATGATAATGAGTGTCAAACAGACATTATTCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTCCCGAATGa                                                                                                                                 >  1:1467721/1‑140 (MQ=255)

    cGTCCTGCCTGATTATTCAACTCTATTTTCTCCATTATCTGTATTAATAAATGATAATGAGTGTCAAACAGACATTATTCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTCCCGAATGa                                                                                                                                 >  2:635681/1‑140 (MQ=255)

     gTCCTGCCTGATTATTCAACTCTATTTTCTCCATTATCTGTATTAATAAATGATAATGAGTGTCAAACAGACATTATTCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTCCCGAATGaa                                                                                                                                <  2:408875/140‑1 (MQ=255)

      tCCTGCCTGATTATTCAACTCTATTTTCTCCATTATCTGTATTAATAAATGATAATGAGTGTCAAACAGACATTATTCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTCCCGAATGaaa                                                                                                                               >  1:1315587/1‑140 (MQ=255)

         tgcctgATTATTCAACTCTATTTTCTCCATTATCTGTATTAATAAATGATAATGAGTGTCAAACAGACATTATTCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTCCCGAATGAAAGtt                                                                                                                            >  2:823929/1‑140 (MQ=255)

           cctgATTATTCAACTCTATTTTCTCCATTATCTGTATTAATAAATGATAATGAGTGTCAAACAGACATTATTCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTCCCGAATGAAAGTTaa                                                                                                                          >  2:68915/1‑140 (MQ=255)

           cctgATTATTCAACTCTATTTTCTCCATTATCTGTATTAATAAATGATAATGAGTGTCAAACAGACATTATTCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTCCCGAATGAAAGTTaa                                                                                                                          >  1:979393/1‑140 (MQ=255)

           cctgATTATTCAACTCTATTTTCTCCATTATCTGTATTAATAAATGATAATGAGTGTCAAACAGACATTATTCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTCCCGAATGAAAGTTaa                                                                                                                          >  2:226039/1‑140 (MQ=255)

           cctgATTATTCAACTCTATTTTCTCCATTATCTGTATTAATAAATGATAATGAGTGTCAAACAGACATTATTCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTCCCGAATGAAAGTTaa                                                                                                                          >  2:1301372/1‑140 (MQ=255)

           cctgATTATTCAACTCTATTTTCTCCATTATCTGTATTAATAAATGATAATGAGTGTCAAACAGACATTATTCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTCCCGAATGAAAGTTaa                                                                                                                          <  2:660860/140‑1 (MQ=255)

           cctgATTATTCAACTCTATTTTCTCCATTATCTGTATTAATAAATGATAATGAGTGTCAAACAGACATTATTCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTCCCGAATGAAAGTTaa                                                                                                                          <  1:1136983/140‑1 (MQ=255)

           cctgATTATTCAACTCTATTTTCTCCATTATCTGTATTAATAAATGATAATGAGTGTCAAACAGACATTATTCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTCCAGAATGTAACTTaa                                                                                                                          >  2:703898/1‑140 (MQ=255)

             tgATTATTCAACTCTATTTTCTCCATTATCTGTATTAATAAATGATAATGAGTGTCAAACAGACATTATTCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTCCCGAATGAAAGTTAAAg                                                                                                                        <  2:523923/140‑1 (MQ=255)

                 tattCAACTCTATTTTCTCCATTATCTGTATTAATAAATGATAATGAGTGTCAAACAGACATTATTCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTCCCGAATGAAAGTTAAAGgtgt                                                                                                                    <  1:1117303/140‑1 (MQ=255)

                  attCAACTCTATTTTCTCCATTATCTGTATTAATAAATGATAATGAGTGTCAAACAGACATTATTCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTCCCGAATGAAAGTTAAAGGTGtt                                                                                                                   <  1:1121621/140‑1 (MQ=255)

                  attCAACTCTATTTTCTCCATTATCTGTATTAATAAATGATAATGAGTGTCAAACAGACATTATTCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTCCCGAATGAAAGTTAAAGGTGtt                                                                                                                   <  1:1500897/140‑1 (MQ=255)

                  attCAACTCTATTTTCTCCATTATCTGTATTAATAAATGATAATGAGTGTCAAACAGACATTATTCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTCCCGAATGAAAGTTAAAGGTGtt                                                                                                                   <  2:737187/140‑1 (MQ=255)

                  attCAACTCTATTTTCTCCATTATCTGTATTAATAAATGATAATGAGTGTCAAACAGACATTATTCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTCCCGAATGAAAGTTAAAGGTGtt                                                                                                                   <  2:505743/140‑1 (MQ=255)

                  attCAACTCTATTTTCTCCATTATCTGTATTAATAAATGATAATGAGTGTCAAACAGACATTATTCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTCCCGAATGAAAGTTAAAGGTGtt                                                                                                                   <  2:1522800/140‑1 (MQ=255)

                    tCAACTCTATTTTCTCCATTATCTGTATTAATAAATGATAATGAGTGTCAAACAGACATTATTCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTCCCGAATGAAAGTTaa                                                                                                                          >  2:667754/1‑131 (MQ=255)

                    tCAACTCTATTTTCTCCATTATCTGTATTAATAAATGATAATGAGTGTCAAACAGACATTATTCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTCCCGAATGAAAGTTAAAGGTGtttt                                                                                                                 <  2:1467721/140‑1 (MQ=255)

                     cAACTCTATTTTCTCCATTATCTGTATTAATAAATGATAATGAGTGTCAAACAGACATTATTCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTCCCGAATGAAAGTTAAAGGTGTttta                                                                                                                >  1:1092167/1‑140 (MQ=255)

                        ctctATTTTCTCCATTATCTGTGTTAATAAATGATAATGAGTGTCAAACAGACATTATTCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTCCCGAATGAAAGTTAAAGGTGTtttattt                                                                                                             >  1:1174052/1‑140 (MQ=255)

                         tctATTTTCTCCATTATCTGTATTAATAAATGATAATGAGTGTCAAACAGACATTATTCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTCCCGAATGAAAGTTAAAGGTGTtttattta                                                                                                            >  2:1233238/1‑140 (MQ=255)

                         tctATTTTCTCCATTATCTGTATTAATAAATGATAATGAGTGTCAAACAGACATTATTCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTCCCGAATGAAAGTTAAAGGTGTtttattta                                                                                                            <  1:600066/140‑1 (MQ=255)

                           tATTTTCTCCATTATCTGTATTAATAAATGATAATGAGTGTCAAACAGACATTATTCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTCCCGAATGAAAGTTAAAGGTGTTTTATTtata                                                                                                          >  2:1173729/1‑140 (MQ=255)

                           tATTTTCTCCATTATCTGTATTAATAAATGATAATGAGTGTCAAACAGACATTATTCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTCCCGAATGAAAGTTAAAGGTGTTTTATTtata                                                                                                          >  1:1067174/1‑140 (MQ=255)

                            aTTTTCTCCATTATCTGTATTAATAAATGATAATGAGTGTCAAACAGACATTATTCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTCCCGAATGAAAGTTAAAGGTGTTTTATTTATAg                                                                                                         <  2:611231/140‑1 (MQ=255)

                             ttttCTCCATTATCTGTATTAATAAATGATAATGAGTGTCAAACAGACATTATTCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTCCCGAATGAAAGTTAAAGGTGTTTTATTTATAGa                                                                                                        >  2:485302/1‑140 (MQ=255)

                                tctcCATTATCTGTATTAATAAATGATAATGAGTGTCAAACAGACATTATTCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTCCCGAATGAAAGTTAAAGGTGtt                                                                                                                   <  2:468450/126‑1 (MQ=255)

                                  tcCATTATCTGTATTAATAAATGATAATGAGTGTCAAACAGACATTATTCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTCCCGAATGAAAGTTAAAGGTGtt                                                                                                                   <  2:419328/124‑1 (MQ=255)

                                   ccATTATCTGTATTAATAAATGATAATGAGTGTCAAACAGACATTATTCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTCCCGAATGAAAGTTAAAGGTGTTTTATTTCTAGATGGGga                                                                                                  <  1:1193915/140‑1 (MQ=255)

                                   ccATTATCTGTATTAATAAATGATAATGAGTGTCAAACAGACATTATTCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTCCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGga                                                                                                  <  2:1402664/140‑1 (MQ=255)

                                   ccATTATCTGTATTAATAAATGATAATGAGTGTCAAACAGACATTATTCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTCCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGga                                                                                                  <  2:238554/140‑1 (MQ=255)

                                     aTTATCTGTATTAATAAATGATAATGAGTGTCAAACAGACATTATTCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTCCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGgaga                                                                                                <  2:1067174/140‑1 (MQ=255)

                                     aTTATCTGTATTAATAAATGATAATGAGTGTCAAACAGACATTATTCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTCCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGgaga                                                                                                <  1:515141/140‑1 (MQ=255)

                                     aTTATCTGTATTAATAAATGATAATGAGTGTCAAACAGACATTATTCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTCCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGga                                                                                                  >  1:528169/1‑138 (MQ=255)

                                      ttATCTGTATTAATAAATGATAATGAGTGTCAAACAGACATTATTCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTCCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGagag                                                                                               <  2:257535/140‑1 (MQ=255)

                                      ttATCTGTATTAATAAATGATAATGAGTGTCAAACAGACATTATTCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTCCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGagag                                                                                               <  1:109236/140‑1 (MQ=255)

                                       tATCTGTATTAATAAATGATAATGAGTGTCAAACAGACATTATTC‑TTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTCCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGAGTc                                                                                             <  1:18716/140‑1 (MQ=255)

                                            gTATTAATAAATGATAATGAGTGTCAAACAGACATTATTCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTCCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGAGTCTTCg                                                                                         >  1:251458/1‑140 (MQ=255)

                                             tATTAATAAATGATAATGAGTGTCAAACAGACATTATTCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTCCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGAGTCTTCGa                                                                                        <  2:1189965/140‑1 (MQ=255)

                                              aTTAATAAATGATAATGAGTGTCAAACAGACATTATTCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTCCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGAGTCTTCGAt                                                                                       >  1:33912/1‑140 (MQ=255)

                                              aTTAATAAATGATAATGAGTGTCAAACAGACATTATTCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTCCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGAGTCTTCGAt                                                                                       >  1:1225396/1‑140 (MQ=255)

                                                  ataaATGATAATGAGTGTCAAACAGACATTATTCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTCCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGAGTCTTCGa                                                                                        >  2:928191/1‑135 (MQ=255)

                                                   taaATGATAATGAGTGTCAAACAGACATTATTCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTCCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGagag                                                                                               <  2:364117/127‑1 (MQ=255)

                                                   taaATGATAATGAGTGTCAAACAGACATTATTCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTCCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGAGTCTTCGAtagtag                                                                                  >  1:1603794/1‑140 (MQ=255)

                                                     aaTGATAATGAGTGTCAAACAGACATTATTCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTCCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGAGTCTTCGATAGTAGTg                                                                                <  2:1134677/140‑1 (MQ=255)

                                                       tGATAATGAGTGTCAAACAGACATTATTCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTCCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGAGTc                                                                                             <  1:661809/125‑1 (MQ=255)

                                                       tGATAATGAGTGTCAAACAGACATTATTCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTCCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGAGTCTTCGAt                                                                                       >  2:1077754/1‑131 (MQ=255)

                                                       tGATAATGAGTGTCAAACAGACATTATTCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTCCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGAGTCTTCGATAGTAGTg                                                                                <  2:1176688/138‑1 (MQ=255)

                                                       tGATAATGAGTGTCAAACAGACATTATTCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTCCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGAGTCTTCGATAGTAGTg                                                                                <  2:1139599/138‑1 (MQ=255)

                                                       tGATAATGAGTGTCAAACAGACATTATTCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTCCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGAGTCTTCGATAGTAGTg                                                                                >  1:1139599/1‑138 (MQ=255)

                                                       tGATAATGAGTGTCAAACAGACATTATTCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTCCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGAGTCTTCGATAGTAGTGAg                                                                              >  1:259412/1‑140 (MQ=255)

                                                       tGATAATGAGTGTCAAACAGACATTATTCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTCCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGAGTCTTCGATAGTAGTGAg                                                                              >  2:1456249/1‑140 (MQ=255)

                                                       tGATAATGAGTGTCAAACAGACATTATTCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTCCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGAGTCTTCGATAGTAGTGAg                                                                              >  2:1624449/1‑140 (MQ=255)

                                                         aTAATGAGTGTCAAACAGACATTATTCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTCCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGAGTCTTCGATAGTAGTGAGGt                                                                            <  1:900878/140‑1 (MQ=255)

                                                                 tgtCAAACAGACATTATTCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTCCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGAGTCTTCGATAGTAGTGAGGTTGACAGat                                                                    >  1:385602/1‑140 (MQ=255)

                                                                 tgtCAAACAGACATTATTCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTCCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGAGTCTTCGATAGTAGTGAGGTTGACAGat                                                                    >  2:1495800/1‑140 (MQ=255)

                                                                   tCAAACAGACATTATTCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTCCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGAGTCTTCGAtagta                                                                                   <  1:1323494/123‑1 (MQ=255)

                                                                   tCAAACAGACATTATTCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTCCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGAGTCTTCGAtagta                                                                                   >  2:1323494/1‑123 (MQ=255)

                                                                   tCAAACAGACATTATTCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTCCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGAGTCTTCGATAGTAGTGAGGTTGACAGatat                                                                  <  1:478383/140‑1 (MQ=255)

                                                                   tCAAACAGACATTATTCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTCCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGAGTCTTCGATAGTAGTGAGGTTGACAGatat                                                                  >  1:671513/1‑140 (MQ=255)

                                                                             attattCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTCCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGAGTCTTCGATAGTAGTGAGGTTGACAGATATCCGCTGCCtg                                                        >  2:1296469/1‑140 (MQ=255)

                                                                                 ttCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTCCCGAATGAAAGTTAAAGGTGTTCTATTTATAGATGGGGAGAGTCTTCGATAGTAGTGAGGTTGACAGATATCCGCTGCCtgatga                                                    >  1:1000934/1‑140 (MQ=255)

                                                                                  tCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTCCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGAGTCTTCGATAGTAGTGAGGTTGACAGATATCCGCTGCCTGATGAg                                                   <  1:1009711/140‑1 (MQ=255)

                                                                                  tCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTCCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGAGTCTTCGATAGTAGTGAGGTTGACAGATATCCGCTGCCTGATGAg                                                   <  1:1233238/140‑1 (MQ=255)

                                                                                  tCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTCCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGAGTCTTCGATAGTAGTGAGGTTGACAGATATCCGCTGCCTGATGAg                                                   <  2:385602/140‑1 (MQ=255)

                                                                                      ttCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTCCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGAGTCTTCGATAGTAGTGAGGTTGACAGATATCCGCTGCCTGATGAGCAAt                                               >  2:1009961/1‑140 (MQ=255)

                                                                                          aCATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTCCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGAGTCTTCGATAGTAGTGAGGTTGACAGATATCCGCTGCCTGATGAGCAATTATg                                           <  1:454145/140‑1 (MQ=255)

                                                                                           cATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTCCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGAGTCTTCGATAGTAGTGAGGTTGACAGATATCCGCTGCCTGATGAGCAATTATGc                                          >  2:808326/1‑140 (MQ=255)

                                                                                             tGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTCCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGAGTCTTCGATAGTAGTGAGGTTGACAGATATCCGCTGCCTGATGAGCAATTATGccc                                        <  2:1603794/140‑1 (MQ=255)

                                                                                             tGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTCCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGAGTCTTCGATAGTAGTGAGGTTGACAGATATCCGCTGCCTGATGAGCAATTATGccc                                        <  2:762998/140‑1 (MQ=255)

                                                                                              gTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTCCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGAGTCTTCGATAGTAGTGAGGTTGACAGATATCCGCTGCCTGATGAGCAATTATGCCCa                                       <  1:745001/140‑1 (MQ=255)

                                                                                              gTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTCCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGAGTCTTCGATAGTAGTGAGGTTGACAGATATCCGCTGCCTGATGAGCAATTATGCCCa                                       <  1:407019/140‑1 (MQ=255)

                                                                                               tAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTCCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGAGTCTTCGATAGTAGTGAGGTTGACAGATATCCGCTGCCTGATGAGCAATTATGCCCaa                                      <  1:1296469/140‑1 (MQ=255)

                                                                                                   tttGGGCAAAATCAAGATACGCTCAGAAGAATACTTCCCGAATGAAAGTTAAATGTGTTTTATTTATAGATGGGGAGAGTCTTCGATAGTAGTGAGGTTGACAGATATCCGCTGCCTGATGAGCAATTATGCCCAATGaa                                  <  2:788575/140‑1 (MQ=255)

                                                                                                    ttGGGCAAAATCAAGATACGCGCAGAAGAATACTTCCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGAGTCTTCGATAGTAGTGAGGTTGACAGATATCCGCTGCCTGATGAGCAATTATGCCCAATGAAt                                 <  1:719594/140‑1 (MQ=255)

                                                                                                    ttGGGCAAAATCAAGATACGCGCAGAAGAATACTTCCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGAGTCTTCGATAGTAGTGAGGTTGACAGATATCCGCTGCCTGATGAGCAATTATGCCCAATGAAt                                 <  1:1164809/140‑1 (MQ=255)

                                                                                                    ttGGGCAAAATCAAGATACGCGCAGAAGAATACTTCCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGAGTCTTCGATAGTAGTGAGGTTGACAGATATCCGCTGCCTGATGAGCAATTATGCCCAATGAAt                                 <  1:1553966/140‑1 (MQ=255)

                                                                                                     tGGGCAAAATCAAGATACGCGCAGAAGAATACTTCCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGAGTCTTCGATAGTAGTGAGGTTGACAGATATCCGCTGCCTGATGAGCAATTATGCCCAATGAATc                                >  1:369477/1‑140 (MQ=255)

                                                                                                      gggCAAAATCAAGATACGCGCAGAAGAATACTTCCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGAGTCTTCGATAGTAGTGAGGTTGACAGATATCCGCTGCCTGATGAGCAATTATGTCCAATGAATCt                               >  2:1427927/1‑140 (MQ=255)

                                                                                                       ggCAAAATCAAGATACGCGCAGAAGAATACTTCCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGAGTCTTCGATAGTAGTGAGGTTGACAGATATCCGCTGCCTGATGAGCAATTATGCCCAATGAATCTa                              <  2:342666/140‑1 (MQ=255)

                                                                                                       ggCAAAATCAAGATACGCGCAGAAGAATACTTCCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGAGTCTTCGATAGTAGTGAGGTTGACAGATATCCGCTGCCTGATGAGCAATTATGCCCAATGAATCTa                              >  1:645837/1‑140 (MQ=255)

                                                                                                           aaaTCAAGATACGCGCAGAAGAATACTTCCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGAGTCTTCGATAGTAGTGAGGTTGACAGATATCCGCTGCCTGATGAGCAATTATGCCCAATGAATCTACCTc                          <  2:265179/140‑1 (MQ=255)

                                                                                                            aaTCAAGATACGCGCAGAAGAATACTTCCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGAGTCTTCGATAGTAGTGAGGTTGACAGATATCCGCTGCCTGATGAGCAATTATGCCCAATGAATCTACCTCa                         <  1:918300/140‑1 (MQ=255)

                                                                                                            aaTCAAGATACGCGCAGAAGAATACTTCCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGAGTCTTCGATAGTAGTGAGGTTGACAGATATCCGCTGCCTGATGAGCAATTATGCCCAATGAATCTACCTCa                         >  1:710660/1‑140 (MQ=255)

                                                                                                                   aTACGCGCAGAAGAATACTTCCCGAGTGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGAGTCTTCGATAGTAGTGAGGTTGACAGATATCCGCTGCCTGATGAGCAATTATGCCCAATGAATCTACCTCATTGGGCa                  <  1:27899/140‑1 (MQ=255)

                                                                                                                   aTACGCGCAGAAGAATACTTCCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGAGTCTTCGATAGTAGTGAGGTTGACAGATATCCGCTGCCTGATGAGCAATTATGCCCAATGAATCTACCTCATTGGGCa                  <  1:118539/140‑1 (MQ=255)

                                                                                                                   aTACGCGCAGAAGAATACTTCCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGAGTCTTCGATAGTAGTGAGGTTGACAGATATCCGCTGCCTGATGAGCAATTATGCCCAATGAATCTACCTCATTGGGCa                  <  2:1245034/140‑1 (MQ=255)

                                                                                                                      cgcgCAGAAGAATACTTCCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGAGTCTTCGATAGTAGTGAGGTTGACAGATATCCGCTGCCTGATGAGCAATTATGCCCAATGAATCTACCTCATTGGGCATaa               >  1:805268/1‑140 (MQ=255)

                                                                                                                         gcAGAAGAATACTTCCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGAGTCTTCGATAGTAGTGAGGTTGACAGATATCCGCTGCCTGATGAGCAATTATGCCCAATGAATCTACCTCATTGGGCATAAttt            >  2:1102889/1‑140 (MQ=255)

                                                                                                                               gaaTACTTCCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGAGTCTTCGATAGTAGTGAGGTTGACAGATATCCGCTGCCTGATGAGCAATTATGCCCAATGAATCTACCTCATT‑GGCATAATTTGGAACtc     <  2:306511/140‑1 (MQ=255)

                                                                                                                                aaTACTTCCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGAGTCTTCGATAGTAGTGAGGTTGACAGATATCCGCTGCCTGATGAGCAATTATGCCCAATGAATCTACCTCATTGGGCATAATTTGGAACtc     <  1:224597/140‑1 (MQ=255)

                                                                                                                                aaTACTTCCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGAGTCTTCGATAGTAGTGAGGTTGACAGATATCCGCTGCCTGATGAGCAATTATGCCCAATGAATCTACCTCATTGGGCATAATTTGGAACtc     <  1:358974/140‑1 (MQ=255)

ATTACGTCCTGCCTGATTATTCAACTCTATTTTCTCCATTATCTGTATTAATAAATGATAATGAGTGTCAAACAGACATTATTCATTTCAACATGTAACTTTGGGCAAAATCAAGATACGCGCAGAAGAATACTTTCCGAATGAAAGTTAAAGGTGTTTTATTTATAGATGGGGAGAGTCTTCGATAGTAGTGAGGTTGACAGATATCCGCTGCCTGATGAGCAATTATGCCCAATGAATCTACCTCATTGGGCATAATTTGGAACTCATC  >  NC_000913/2456058‑2456328

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`