BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,634,831	G→T	intergenic (‑373/‑10)	yhiL ← / → yhiM	putative uncharacterized protein YhiL/inner membrane protein with a role in acid resistance

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,634,831	0	G	T	100.0%	486.5 / NA	134	intergenic (‑373/‑10)	yhiL/yhiM	putative uncharacterized protein YhiL/inner membrane protein with a role in acid resistance
Reads supporting (aligned to +/- strand): ref base G (0/0); new base T (69/65); total (69/65)

Only 100 of 137 total aligned reads displayed.

CGCTGAAAAGTAGCGCTCTGCAAAGTAAACCCCGCTATAGTTATGCTATGCATTTGTCTTTAATGATATCTCGTCATTATATTAACAGGATGAAATTATCATTAATGCATATTTCAATATTAGCAGGGATACCTGAGGAGTTTAAAGTGAACATATATATCGGGTGGCTTTTCAAATTAATCCCTTTGATTATGGGCTTAATTTGTATCGCGTTAGGTGGCTTTGTGCTGGAAAGTTCAGGGCAAAGCGAGTATTTCGTCGCGGGTCATGTG  >  NC_000913/3634695‑3634966

cGCTGAAAAGTAGCGCTCTGCAAAGTAAACCCCGCTATAGTTATGCTATGCATTTGTCTTTAATGATATCTCGTCATTATATTAACAGGATGAAATTATCATTAATGCATATTTCAATATTAGCAGGGATACCTgatgag                                                                                                                                      >  2:242835/1‑140 (MQ=255)

 gCTGAAAAGTAGCGCTCTGCAAAGTAAACCCCGCTATAGTTATGCTATGCATTTGTCTTTAATGATATCTCGTCATTATATTAACAGGATGAAATTATCATTAATGCATATTTCAATATTAGCAGGGATACCTGATGAGt                                                                                                                                     <  2:891241/140‑1 (MQ=255)

   tGAAAAGTAGCGCTCTGCAAAGTAAACCCCGCTATAGTTATGCTATGCATTTGTCTTTAATGATATCTCGTCATTATATTAACAGGATGAAATTATCATTAATGCATATTTCAATATTAGCAGGGATACCTGATGAGttt                                                                                                                                   >  2:887509/1‑140 (MQ=255)

      aaaGTAGCGCTCTGCAAAGTAAACCCCGCTATAGTTATGCTATGCATTTGTCTTTAATGATATCTCGTCATTATATTAACAGGATGAAATTATCATTAATGCATATTTCAATATTAGCAGGGATACCTGATGAGTTTaaa                                                                                                                                <  2:1404859/140‑1 (MQ=255)

      aaaGTAGCGCTCTGCAAAGTAAACCCCGCTATAGTTATGCTATGCATTTGTCTTTAATGATATCTCGTCATTATATTAACAGGATGAAATTATCATTAATGCATATTTCAATATTAGCAGGGATACCTGATGAGTTTaaa                                                                                                                                <  2:1220497/140‑1 (MQ=255)

       aaGTAGCGCTCTGCAAAGTAAACCCCGCTATAGTTATGCTATGCATTTGTCTTTAATGATATCTCGTCATTATATTAACAGGATGAAATTATCATTAATGCATATTTCAATATTAGCAGGGATACCTGATGAGTTTAAAg                                                                                                                               <  1:887509/140‑1 (MQ=255)

       aaGTAGCGCTCTGCAAAGTAAACCCCGCTATAGTTATGCTATGCATTTGTCTTTAATGATATCTCGTCATTATATTAACAGGATGAAATTATCATTAATGCATATTTCAATATTAGCAGGGATACCTGATGAGTTTAAAg                                                                                                                               <  1:244866/140‑1 (MQ=255)

       aaGTAGCGCTCTGCAAAGTAAACCCCGCTATAGTTATGCTATGCATTTGTCTTTAATGATATCTCGTCATTATATTAACAGGATGAAATTATCATTAATGCATATTTCAATATTAGCAGGGATACCTGATGAGTTTAAAg                                                                                                                               <  1:145962/140‑1 (MQ=255)

        aGTAGCGCTCTGCAAAGTAAACCCCGCTATAGTTATGCTATGCATTTGTCTTTAATGATATCTCGTCATTATATTAACAGGATGAAATTATCATTAATGCATATTTCAATATTAGCAGGGATACCTGATGAGTTTAAAGt                                                                                                                              <  1:555180/140‑1 (MQ=255)

         gTAGCGCTCTGCAAAGTAAACCCCGCTATAGTTATGCTATGCATTTGTCTTTAATGATATCTCGTCATTATATTAACAGGATGAAATTATCATTAATGCATATTTCAATATTAGCAGGGATACCTGATGAGTTTAAAGTg                                                                                                                             <  2:1523897/140‑1 (MQ=255)

         gTAGCGCTCTGCAAAGTAAACCCCGCTATAGTTATGCTATGCATTTGTCTTTAATGATATCTCGTCATTATATTAACAGGATGAAATTATCATTAATGCATATTTCAATATTAGCAGGGATACCTGATGAGTTTAAAGTg                                                                                                                             <  1:363816/140‑1 (MQ=255)

         gTAGCGCTCTGCAAAGTAAACCCCGCTATAGTTATGCTATGCATTTGTCTTTAATGATATCTCGTCATTATATTAACAGGATGAAATTATCATTAATGCATATTTCAATATTAGCAGGGATACCTGATGAGTTTAAAGTg                                                                                                                             <  2:1259917/140‑1 (MQ=255)

         gTAGCGCTCTGCAAAGTAAACCCCGCTATAGTTATGCTATGCATTTGTCTTTAATGATATCTCGTCATTATATTAACAGGATGAAATTATCATTAATGCATATTTCAATATTAGCAGGGATACCTGATGAGTTTAAAGTg                                                                                                                             <  2:621905/140‑1 (MQ=255)

         gTAGCGCTCTGCAAAGTAAACCCCGCTATAGTTATGCTATGCATTTGTCTTTAATGATATCTCGTCATTATATTAACAGGATGAAATTATCATTAATGCATATTTCAATATTAGCAGGGATACCTGATGAGTTTAAAGTg                                                                                                                             <  1:1426298/140‑1 (MQ=255)

         gTAGCGCTCTGCAAAGTAAACCCCGCTATAGTTATGCTATGCATTTGTCTTTAATGATATCTCGTCATTATATTAACAGGATGAAATTATCATTAATGCATATTTCAATATTAGCAGGGATACCTGATGAGTTTAAAGTg                                                                                                                             <  1:731427/140‑1 (MQ=255)

         gTAGCGCTCTGCAAAGTAAACCCCGCTATAGTTATGCTATGCATTTGTCTTTAATGATATCTCGTCATTATATTAACAGGATGAAATTATCATTAATGCATATTTCAATATTAGCAGGGATACCTGATGAGTTTAAAGTg                                                                                                                             <  2:1188774/140‑1 (MQ=255)

         gTAGCGCTCTGCAAAGTAAACCCCGCTATAGTTATGCTATGCATTTGTCTTTAATGATATCTCGTCATTATATTAACAGGATGAAATTATCATTAATGCATATTTCAATATTAGCAGGGATACCTGATGAGTTTAAAGTg                                                                                                                             <  1:1165612/140‑1 (MQ=255)

         gTAGCGCTCTGCAAAGTAAACCCCGCTATAGTTATGCTATGCATTTGTCTTTAATGATATCTCGTCATTATATTAACAGGATGAAATTATCATTAATGCATATTTCAATATTAGCAGGGATACCTGATGAGTTTAAAGTg                                                                                                                             <  1:924837/140‑1 (MQ=255)

          tAGCGCTCTGCAAAGTAAACCCCGCTATAGTTATGCTATGCATTTGTCTTTAATGATATCTCGTCATTATATTAACAGGATGAAATTATCATTAATGCATATTTCAATATTAGCAGGGATACCTGATGAGTTTAAAGTGa                                                                                                                            <  1:218449/140‑1 (MQ=255)

             cgcTCTGCAAAGTAAACCCCGCTATAGTTATGCTATGCATTTGTCTTTAATGATATCTCGTCATTATATTAACAGGATGAAATTATCATTAATGCATATTTCAATATTAGCAGGGATACCTGATGAGttt                                                                                                                                   >  2:382835/1‑130 (MQ=255)

             cgcTCTGCAAAGTAAACCCCGCTATAGTTATGCTATGCATTTGTCTTTAATGATATCTCGTCATTATATTAACAGGATGAAATTATCATTAATGCATATTTCAATATTAGCAGGGATACCTGATGAGttt                                                                                                                                   <  1:382835/130‑1 (MQ=255)

             cgcTCTGCAAAGTAAACCCCGCTATAGTTATGCTATGCATTTGTCTTTAATGATATCTCGTCATTATATTAACAGGATGAAATTATCATTAATGCATATTTCAATATTAGCAGGGATACCTGATGAGTTTAAAGTg                                                                                                                             >  1:1274699/1‑136 (MQ=255)

             cgcTCTGCAAAGTAAACCCCGCTATAGTTATGCTATGCATTTGTCTTTAATGATATCTCGTCATTATATTAACAGGATGAAATTATCATTAATGCATATTTCAATATTAGCAGGGATACCTGATGAGTTTAAAGTg                                                                                                                             <  2:1274699/136‑1 (MQ=255)

             cgcTCTGCAAAGTAAACCCCGCTATAGTTATGCTATGCATTTGTCTTTAATGATATCTCGTCATTATATTAACAGGATGAAATTATCATTAATGCATATTTCAATATTAGCAGGGATACCTGATGAGTTTAAAGTGAACa                                                                                                                         <  1:506114/140‑1 (MQ=255)

             cgcTCTGCAAAGTAAACCCCGCTATAGTTATGCTATGCATTTGTCTTTAATGATATCTCGTCATTATATTAACAGGATGAAATTATCATTAATGCATATTTCAATATTAGCAGGGATACCTGATGAGTTTAAAGTGAACa                                                                                                                         >  2:1106111/1‑140 (MQ=255)

               ctctGCAAAGTAAACCCCGCTATAGTTATGCTATGCATTTGTCTTTAATGATATCTCGTCATTATATTAACAGGATGAAATTATCATTAATGCATATTTCAATATTAGCAGGGATACCTGATGAGTTTAAAGTGAACata                                                                                                                       >  2:682848/1‑140 (MQ=255)

                         tAAACCCCGCTATAGTTATGCTATGCATTTGTCTTTAATGATATCTCGTCATTATATTAACAGGATGAAATTATCATTAATGCATATTTCAATATTAGCAGGGATACCTGATGAGTTTAAAGTGAACATATATATCGGGt                                                                                                             <  1:1084942/140‑1 (MQ=255)

                           aaCCCCGCTATAGTTATGCTATGCATTTGTCTTTAATGATATCTCGTCATTATATTAACAGGATGAAATTATCATTAATGCATATTTCAATATTAGCAGGGATACCTGATGAGTTTAAAGTGAACATATATATCGGGTgg                                                                                                           <  2:829911/140‑1 (MQ=255)

                                cGCTATAGTTATGCTATGCATTTGTCTTTAATGATATCTCGTCATTATATTAACAGGATGAAATTATCATTAATGCATATTTCAATATTAGCAGGGATACCTGATGAGTTTAAAGTGAACATATATATCGGGTGGCtttt                                                                                                      <  1:682848/140‑1 (MQ=255)

                                   tataGTTATGCTATGCATTTGTCTTTAATGATATCTCGTCATTATATTAACAGGATGAAATTATCATTAATGCATATTTCAATATTAGCAGGGATACCTGATGAGTTTAAAGTGAACATATATATCGGGTgg                                                                                                           <  1:1056114/132‑1 (MQ=255)

                                          atgctatgcATTTGTCTTTAATGATATCTCGTCATTATATTAACAGGATGAAATTATCATTAATGCATATTTCAATATTAGCAGGGATACCTGATGAGTTTAAAGTGAACATATATATCGGGTGGCTTTTCAAATTAATc                                                                                            >  2:1320787/1‑140 (MQ=255)

                                          atgctatgcATTTGTCTTTAATGATATCTCGTCATTATATTAACAGGATGAAATTATCATTAATGCATATTTCAATATTAGCAGGGATACCTGATGAGTTTAAAGTGAACATATATATCGGGTGGCTTTTCAAATTAATc                                                                                            <  2:228516/140‑1 (MQ=255)

                                          atgctatgcATTTGTCTTTAATGATATCTCGTCATTATATTAACAGGATGAAATTATCATTAATGCATATTTCAATATTAGCAGGGATACATGATGAGTTTAAAGTGAACATATATATCGGGTGGCTTTTCAAATTAATc                                                                                            >  2:1597803/1‑140 (MQ=255)

                                             ctatgcATTTGTCTTTAATGATATCTCGTCATTATATTAACAGGATGAAATTATCATTAATGCATATTTCAATATTAGCAGGGATACCTGATGAGTTTAAAGTGAACATATATATCGGGTGGCTTTTCAAATTAATCCCt                                                                                         >  1:1250484/1‑140 (MQ=255)

                                               atgcATTTGTCTTTAATGATATCTCGTCATTATATTAACAGGATGAAATTATCATTAATGCATATTTCAATATTAGCAGGGATACCTGATGAGTTTAAAGTGAACATATATATCGGGTGGCTTTTCAAATTAATCCCttt                                                                                       >  1:1560246/1‑140 (MQ=255)

                                               atgcATTTGTCTTTAATGATATCTCGTCATTATATTAACAGGATGAAATTATCATTAATGCATATTTCAATATTAGCAGGGATACCTGATGAGTTTAAAGTGAACATATATATCGGGTGGCTTTTCAAATTAATCCCttt                                                                                       >  1:944348/1‑140 (MQ=255)

                                               atgcATTTGTCTTTAATGATATCTCGTCATTATATTAACAGGATGAAATTATCATTAATGCATATTTCAATATTAGCAGGGATACCTGATGAGTTTAAAGTGAACATATATATCGGGTGGCTTTTCAAATTAATCCCttt                                                                                       <  2:1222166/140‑1 (MQ=255)

                                                tgcATTTGTCTTTAATGATATCTCGTCATTATATTAACAGGATGAAATTATCATTAATGCATATTTCAATATTAGCAGGGATACCTGATGAGTTTAAAGTGAACATATATATCGGGTGGCTTTTCAAATTaa                                                                                              >  1:923821/1‑132 (MQ=255)

                                                tgcATTTGTCTTTAATGATATCTCGTCATTATATTAACAGGATGAAATTATCATTAATGCATATTTCAATATTAGCAGGGATACCTGATGAGTTTAAAGTGAACATATATATCGGGTGGCTTTTCAAATTaa                                                                                              <  2:923821/132‑1 (MQ=255)

                                                tgcATTTGTCTTTAATGATATCTCGTCATTATATTAACAGGATGAAATTATCATTAATGCATATTTCAATATTAGCAGGGATACCTGATGAGTTTAAAGTGAACATATATATCGGGTGGCTTTTCAAATTAATCCCTTTg                                                                                      >  1:1365411/1‑140 (MQ=255)

                                                tgcATTTGTCTTTAATGATATCTCGTCATTATATTAACAGGATGAAATTATCATTAATGCATATTTCAATATTAGCAGGGATACCTGATGAGTTTAAAGTGAACATATATATCGGGTGGCTTTTCAAATTAATCCCTTTg                                                                                      >  1:1074617/1‑140 (MQ=255)

                                                tgcATTTGTCTTTAATGATATCTCGTCATTATATTAACAGGATGAAATTATCATTAATGCATATTTCAATATTAGCAGGGATACCTGATGAGTTTAAAGTGAACATATATATCGGGTGGCTTTTCAAATTAATCCCTTTg                                                                                      >  2:830315/1‑140 (MQ=255)

                                                tgcATTTGTCTTTAATGATATCTCGTCATTATATTAACAGGATGAAATTATCATTAATGCATATTTCAATATTAGCAGGGATACCTGATGAGTTTAAAGTGAACATATATATCGGGTGGCTTTTCAAATTAATCCCTTTg                                                                                      >  2:1545761/1‑140 (MQ=255)

                                                  cATTTGTCTTTAATGATATCTCGTCATTATATTAACAGGATGAAATTATCATTAATGCATATTTCAATATTAGCAGGGATACCTGATGAGTTTAAAGTGAACATATATATCGGGTGGCTTTTCAAATTAATCCCTTTGAt                                                                                    >  1:1687669/1‑140 (MQ=255)

                                                  cATTTGTCTTTAATGATATCTCGTCATTATATTAACAGGATGAAATTATCATTAATGCATATTTCAATATTAGCAGGGATACCTGATGAGTTTAAAGTGAACATATATATCGGGTGGCTTTTCAAATTAATCCCTTTGAt                                                                                    >  1:234108/1‑140 (MQ=255)

                                                     ttGTCTTTAATGATATCTCGTCATTATATTAACAGGATGAAATTATCATTAATGCATATTTCAATATTAGCAGGGATACCTGATGAGTTTAAAGTGAACATATATATCGGGTGGCTTTTCAAATTAATCCCTTTGATTAt                                                                                 >  2:59991/1‑140 (MQ=255)

                                                       gTCTTTAATGATATCTCGTCATTATATTAACAGGATGAAATTATCATTAATGCATATTTCAATATTAGCAGGGATACCTGATGAGTTTAAAGTGAACATATATATCGGGTGGCTTTTCAAATTAATCCCTTTGATTATgg                                                                               >  2:1172810/1‑140 (MQ=255)

                                                       gTCTTTAATGATATCTCGTCATTATATTAACAGGATGAAATTATCATTAATGCATATTTCAATATTAGCAGGGATACCTGATGAGTTTAAAGTGAACATATATATCGGGTGGCTTTTCAAATTAATCCCTTTGATTATgg                                                                               >  2:974835/1‑140 (MQ=255)

                                                         cTTTAATGATATCTCGTCATTATATTAACAGGATGAAATTATCATTAATGCATATTTCAATATTAGCAGGGATACCTGATGAGTTTAAAGTGAACATATATATCGGGTGGCTTTTCAAATTAATCCCTTTGATTATGGGc                                                                             <  1:974835/140‑1 (MQ=255)

                                                         cTTTAATGATATCTCGTCATTATATTAACAGGATGAAATTATCATTAATGCATATTTCAATATTAGCAGGGATACCTGATGAGTTTAAAGTGAACATATATATCGGGTGGCTTTTCAAATTAATCCCTTTGATTATGGGc                                                                             <  1:164811/140‑1 (MQ=255)

                                                          tttAATGATATCTCGTCATTATATTAACAGGATGAAATTATCATTAATGCATATTTCAATATTAGCAGGGATACCTGATGAGTTTAAAGTGAACATATATATCGGGTGGCTTTTCAAATTaa                                                                                              <  1:1196229/122‑1 (MQ=255)

                                                            tAATGATATCTCGTCATTATATTAACAGGATGAAATTATCATTAATGCATATTTCAATATTAGCAGGGATACCTGATGAGTTTAAAGTGAACATATATATCGGGTGGCTTTTCAAATTAATCCCTTTGATTATGGGCTTa                                                                          >  2:1117325/1‑140 (MQ=255)

                                                            tAATGAGATCTCGTCATAATATTAACAGGGTGAAATTATCATTAATGCATATTATAATCTTAGCAGGGATACCTGATGAGTTTAAAGCGAACATATATATCGGGTGCCTTTTCAAATTAATCCCTTTGATTATGGGCTTa                                                                          >  2:1673701/1‑140 (MQ=255)

                                                                  tatCTCGTCATTATATTAACAGGATGAAATTATCATTAATGCATATTTCAATATTAGCAGGGATACCTGATGAGTTTAAAGTGAACATATATATCGGGTGGCTTTTCAAATTAATCCCTTTGATTATGGGCTTAATTTGt                                                                    >  1:323170/1‑140 (MQ=255)

                                                                  tatCTCGTCATTATATTAACAGGATGAAATTATCATTAATGCATATTTCAATATTAGCAGGGATACCTGATGAGTTTAAAGTGAACATATATATCGGGTGGCTTTTCAAATTAATCCCTTTGATTATGGGCTTAATTTGt                                                                    >  1:74655/1‑140 (MQ=255)

                                                                   atCTCGTCATTATATTAACAGGATGAAATTATCATTAATGCATATTTCAATATTAGCAGGGATACCTGATGAGTTTAAAGTGAACATATATATCGGGTGGCTTTTCAAATTAATCCCTTTGATTATGGGCTTAATTTGTa                                                                   <  1:721673/140‑1 (MQ=255)

                                                                   atCTCGTCATTATATTAACAGGATGAAATTATCATTAATGCATATTTCAATATTAGCAGGGATACCTGATGAGTTTAAAGTGAACATATATATCGGGTGGCTTTTCAAATTAATCCCTTTGATTATGGGCTTAATTTGTa                                                                   <  1:1172810/140‑1 (MQ=255)

                                                                    tctcGTCATTATATTAACAGGATGAAATTATCATTAATGCATATTTCAATATTAGCAGGGATACCTGATGAGTTTAAAGTGAACATATATATCGGGTGGCTTTTCAAATTAATCCCTTTGATTATGGGCTTAATTTGTAt                                                                  >  2:421757/1‑140 (MQ=255)

                                                                    tctcGTCATTATATTAACAGGATGAAATTATCATTAATGCATATTTCAATATTAGCAGGGATACCTGATGAGTTTAAAGTGAACATATATATCGAGTGGCTTTTCAAATTAATCCCTTTGATTATGGGCTTAATTTGTAt                                                                  >  2:1655185/1‑140 (MQ=255)

                                                                      tcGTCATTATATTAACAGGATGAAATTATCATTAATGCATATTTCAATATTAGCAGGGATACCTGATGAGTTTAAAGTGAACATATATATCGGGTGGCTTTTCAAATTAATCCCTTTGATTATGGGCTTAATTTGTATcg                                                                >  1:1057557/1‑140 (MQ=255)

                                                                           aTTATATTAACAGGATGAAATTATCATTAATGCATATTTCAATATTAGCAGGGATACCTGATGAGTTTAAAGTGAACATATATATCGGGTGGCTTTTCAAATTAATCCCTTTGATTATGGGCTTAATTTGTATCGCGTTa                                                           >  1:1388286/1‑140 (MQ=255)

                                                                             tataTTAACAGGATGAAATTATCATTAATGCATATTTCAATATTAGCAGGGATACCTGATGAGTTTAAAGTGAACATATATATCGGGTGGCTTTTCAAATTAATCCCTTTGATTATGGGCTTAATTTGTATCGCGTTAgg                                                         <  1:1532759/140‑1 (MQ=255)

                                                                             tataTTAACAGGATGAAATTATCATTAATGCATATTTCAATATTAGCAGGGATACCTGATGAGTTTAAAGTGAACATATATATCGGGTGGCTTTTCAAATTAATCCCTTTGATTATGGGCTTAATTTGTATCGCGTTAgg                                                         <  2:341951/140‑1 (MQ=255)

                                                                               tatTAACAGGATGAAATTATCATTAATGCATATTTCAATATTAGCAGGGATACCTGATGAGTTTAAAGTGAACATATATATCGGGTGGCTTTTCAAATTAATCCCTTTGATTATGGGCTTAATTTGTATCGCGTTAGGTg                                                       >  2:1016545/1‑140 (MQ=255)

                                                                                atTAACAGGATGAAATTATCATTAATGCATATTTCAATATTAGCAGGGATACCTGATGAGTTAAAAGTGAACATATATATCGGGTGGCTTTTCAAATTAATCCCTTTGATTATGGGCTTAATTTGTATCACGTTAGGTgg                                                      >  1:717252/1‑140 (MQ=255)

                                                                                  tAACAGGATGAAATTATCATTAATGCATATTTCAATATTAGCAGGGATACCTGATGAGTTTAAAGTGAACATATATATCGGGTGGCTTTTCAAATTAATCCCTTTGATTATGGGCTTAATTTGTATCGCGTTAGGTGGCt                                                    <  1:1016545/140‑1 (MQ=255)

                                                                                  tAACAGGATGAAATTATCATTAATGCATATTTCAATATTAGCAGGGATACCTGATGAGTTTAAAGTGAACATATATATCGGGTGGCTTTTCAAATTAATCCCTTTGATTATGGGCTTAATTTGTATCGCGTTAGGTGGCt                                                    >  2:302140/1‑140 (MQ=255)

                                                                                    aCAGGATGAAATTATCATTAATGCATATTTCAATATTAGCAGGGATACCTGATGAGTTTAAAGTGAACATATATATCGGGTGGCTTTTCAAATTAATCCCTTTGATTATGGGCTTAATTTGTATCGCGTTAGGTGGCttt                                                  >  1:367664/1‑140 (MQ=255)

                                                                                      aGGATGAAATTATCATTAATGCATATTTCAATATTAGCAGGGATACCTGATGAGTTTAAAGTGAACATATATATCGGGTGGCTTTTCAAATTAATCCCTTTGATTATGGGCTTAATTTGTATCGCGTTAGGTGGCTTtgt                                                >  2:1237638/1‑140 (MQ=255)

                                                                                       ggATGAAATTATCATTAATGCATATTTCAATATTAGCAGGGATACCTGATGAGTTTAAAGTGAACATATATATCGGGTGGCTTTTCAAATTAATCCCTTTGATTATGGGCTTAATTTGTATCGCGTTAGGTGGCTTtgtg                                               >  1:1667847/1‑140 (MQ=255)

                                                                                       ggATGAAATTATCATTAATGCATATTTCAATATTAGCAGGGATACCTGATGAGTTTAAAGTGAACATATATATCGGGTGGCTTTTCAAATTAATCCCTTTGATTATGGGCTTAATTTGTATCGCGTTAGGTGGCTTtgtg                                               >  2:1376742/1‑140 (MQ=255)

                                                                                       ggATGAAATTATCATTAATGCATATTTCAATATTAGCAGGGATACCTGATGAGTTTAAAGTGAACATATATATCGGGTGGCTTTTCAAATTAATCCCTTTGATTATGGGCTTAATTTGTATCGCGTTAGGTGGCTTtgtg                                               >  2:1148478/1‑140 (MQ=255)

                                                                                       ggATGAAATTATCATTAATGCATATTTCAATATTAGCAGGGATACCTGATGAGTTAAAAGTGAACATATATATCGGGTGGCTTTTCAAATTAATCCCTTTGATTATGGGCTTAATTTGTATCACGTTAGGTGGCTTtgtg                                               <  2:717252/140‑1 (MQ=255)

                                                                                         aTGAAATTATCATTAATGCATATTTCAATATTAGCAGGGATACCTGATGAGTTTAAAGTGAACATATATATCGGGTGGCTTTTCAAATTAATCCCTTTGATTATGGGCTTAATTTGTATCGCGTTAGGTGGCTTTGTGCt                                             >  1:1386121/1‑140 (MQ=255)

                                                                                         aTGAAATTATCATTAATGCATATTTCAATATTAGCAGGGATACCTGATGAGTTTAAAGTGAACATATATATCGGGTGGCTTTTCAAATTAATCCCTTTGATTATGGGCTTAATTTGTATCGCGTTAGGTGGCTTTGTGCt                                             <  2:738683/140‑1 (MQ=255)

                                                                                            aaaTTATCATTAATGCATATTTCAATATTAGCAGGGATACCTGATGAGTTTAAAGTGAACATATATATCGGGTGGCTTTTCAAATTAATCCCTTTGATTATGGGCTTAATTTGTATCGCGTTAGGTGGCTTTGTGCTGGa                                          <  2:234108/140‑1 (MQ=255)

                                                                                            aaaTTATCATTAATGCATATTTCAATATTAGCAGGGATACCTGATGAGTTTAAAGTGAACATATATATCGGGTGGCTTTTCAAATTAATCCCTTTGATTATGGGCTTAATTTGTATCGCGTTAGGTGGCTTTGTGCTGGa                                          <  2:1560246/140‑1 (MQ=255)

                                                                                                  tCATTAATGCATATTTCAATATTAGCAGGGATACCTGATGAGTTTAAAGTGAACATATATATCGGGTGGCTTTTCAAATTAATCCCTTTGATTATGGGCTTAATTTGTATCGCGTTAGGTGGCTTTGTGCTGGAAAGTTc                                    >  2:1591711/1‑140 (MQ=255)

                                                                                                      tAATGCATATTTCAATATTAGCAGGGATACCTGATGAGTTTAAAGTGAACATATATATCGGGTGGCTTTTCAAATTAATCCCTTTGATTATGGGCTTAATTTGTATCGCGTTAGGTGGCTTTGTGCTGGAAAGTTCAggg                                >  1:246044/1‑140 (MQ=255)

                                                                                                      tAATGCATATTTCAATATTAGCAGGGATACCTGATGAGTTTAAAGTGAACATATATATCGGGTGGCTTTTCAAATTAATCCCTTTGATTATGGGCTTAATTTGTATCGCGTTAGGTGGCTTTGTGCTGGAAAGTTCAggg                                >  2:801174/1‑140 (MQ=255)

                                                                                                       aaTGCATATTTCAATATTAGCAGGGATACCTGATGAGTTTAAAGTGAACATATATATCGGGTGGCTTTTCAAATTAATCCCTTTGATTATGGGCTTAATTTGTATCGCGTTAGGTGGCTTTGTGCTGGAAAGTTCAGGGc                               <  2:944348/140‑1 (MQ=255)

                                                                                                         tGCATATTTCAATATTAGCAGGGATACCTGATGAGTTTAAAGTGAACATATATATCGGGTGGCTTTTCAAATTAATCCCTTTGATTATGGGCTTAATTTGTATCGCGTTAGGTGGCTTTGTGCTGGAAAGTTCAGGGCaa                             <  1:627630/140‑1 (MQ=255)

                                                                                                            atatTTCAATATTAGCAGGGATACCTGATGAGTTTAAAGTGAACATATATATCGGGTGGCTTTTCAAATTAATCCCTTTGATTATGGGCTTAATTTGTATCGCGTTAGGTGGCTTTGTGCTGGAAAGTTCAGGGCAAAGc                          <  2:1667847/140‑1 (MQ=255)

                                                                                                            atatTTCAATATTAGCAGGGATACCTGATGAGTTTAAAGTGAACATATATATCGGGTGGCTTTTCAAATTAATCCCTTTGATTATGGGCTTAATTTGTATCGCGTTAGGTGGCTTTGTGCTGGAAAGTTCAGGGCAAAGc                          <  1:790061/140‑1 (MQ=255)

                                                                                                             tatTTCAATATTAGCAGGGATACCTGATGAGTTTAAAGTGAACATATATATCGGGTGGCTTTTCAAATTAATCCCTTTGATTATGGGCTTAATTTGTATCGCGTTAGGTGGCTTTGTGCTGGAAAGTTCAGGGCAAAGCg                         >  2:488894/1‑140 (MQ=255)

                                                                                                                ttCAATATTAGCAGGGATACCTGATGAGTTTAAAGTGAACATATATATCGGGTGGCTTTTCAAATTAATCCCTTTGATTATGGGCTTAATTTGTATCGCGTTAGGTGGCTTTGTGCTGGAAAGTTCAGGGc                               <  1:765595/131‑1 (MQ=255)

                                                                                                                ttCAATATTAGCAGGGATACCTGATGAGTTTAAAGTGAACATATATATCGGGTGGCTTTTCAAATTAATCCCTTTGATTATGGGCTTAATTTGTATCGCGTTAGGTGGCTTTGTGCTGGAAAGTTCAGGGc                               >  2:765595/1‑131 (MQ=255)

                                                                                                                       ttAGCAGGGATACCTGATGAGTTTAAAGTGAACATATATATCGGGTGGCTTTTCAAATTAATCCCTTTGATTATGGGCTTAATTTGTATCGCGTTAGGTGGCTTTGTGCTGGAAAGTTCAGGGCAAAGCGAGTATTtcgt               <  1:406052/140‑1 (MQ=255)

                                                                                                                        tAGCAGGGATACCTGATGAGTTTAAAGTGAACATATATATCGGGTGGCTTTTCAAATTAATCCCTTTGATTATGGGCTTAATTTGTATCGCGTTAGGTGGCTTTGTGCTGGAAAGTTCAGGGCAAAGCGAGTATTtcgtc              >  1:1548676/1‑140 (MQ=255)

                                                                                                                          gCAGGGATACCTGATGAGTTTAAAGTGAACATATATATCGGGTGGCTTTTCAAATTAATCCCTTTGATTATGGGCTTAATTTGTATCGCGTTAGGTGGCTTTGTGCTGGAAAGTTCAGGGCAAAGCGAGTATTTCGTcgc            >  2:620430/1‑140 (MQ=255)

                                                                                                                          gCAGGGATACCTGATGAGTTTAAAGTGAACATATATATCGGGTGGCTTTTCAAATTAATCCCTTTGATTATGGGCTTAATTTGTATCGCGTTAGGTGGCTTTGTGCTGGAAAGTTCAGGGCAAAGCGAGTATTTCGTcgc            >  2:674068/1‑140 (MQ=255)

                                                                                                                          gCAGGGATACCTGATGAGTTTAAAGTGAACATATATATCGGGTGGCTTTTCAAATTAATCCCTTTGATTATGGGCTTAATTTGTATCGCGTTAGGTGGCTTTGTGCTGGAAAGTTCAGGGCAAAGCGAGTATTTCGTcgc            >  1:1656430/1‑140 (MQ=255)

                                                                                                                          gCAGGGATACCTGATGAGTTTAAAGTGAACATATATATCGGGTGGCTTTTCAAATTAATCCCTTTGATTATGGGCTTAATTTGTATCGCGTTAGGTGGCTTTGTGCTGGAAAGTTCAGGGCAAAGCGAGTATTTCGTcgc            >  1:968222/1‑140 (MQ=255)

                                                                                                                          gCAGGGATACCTGATGAGTTTAAAGTGAACATATATATCGGGTGGCTTTTCAAATTAATCCCTTTGATTATGGGCTTAATTTGTATCGCGTTAGGTGGCTTTGTGCTGGAAAGTTCAGGGCAAAGCGAGTATTTCGTcgc            >  2:1591958/1‑140 (MQ=255)

                                                                                                                          gCAGGGATACCTGATGAGTTTAAAGTGAACATATATATCGGGTGGCTTTTCAAATTAATCCCTTTGATTATGGGCTTAATTTGTATCGCGTTAGGTGGCTTTGTGCTGGAAAGTTCAGGGCAAAGCGAGTATTTCGTcgc            >  1:843509/1‑140 (MQ=255)

                                                                                                                            aGGGATACCTGATGAGTTTAAAGTGAACATATATATCGGGTGGCTTTTCAAATTAATCCCTTTGATTATGGGCTTAATTTGTATCGCGTTAGGTGGCTTTGTGCTGGAAAGTTCAGGGCAAAGCGAGTATTTCGTCGCgg          <  1:1117325/140‑1 (MQ=255)

                                                                                                                               gATACCTGATGAGTTTAAAGTGAACATATATATCGGGTGGCTTTTCAAATTAATCCCTTTGATTATGGGCTTAATTTGTATCGCGTTAGGTGGCTTTGTGCTGGAAAGTTCAGGGCAAAGCGAGTATTTCGTCGCGGGTc       <  2:167299/140‑1 (MQ=255)

                                                                                                                                 tACCTGATGAGTTTAAAGTGAACATATATATCGGGTGGCTTTTCAAATTAATCCCTTTGATTATGGGCTTAATTTGTATCGCGTTAGGTGGCTTTGTGCTGGAAAGTTCAGGGCAAAGCGAGTATTTCGTCGCGGGTCAt     >  1:404984/1‑140 (MQ=255)

                                                                                                                                   ccTGATGAGTTTAAAGTGAACATATATATCGGGTGGCTTTTCAAATTAATCCCTTTGATTATGGGCTTAATTTGTATCGCGTTAGGTGGCTTTGTGCTGGAAAGTTCAGGGCAAAGCGAGTATTTCGTCGCGGGTCAtgt   >  1:422101/1‑140 (MQ=255)

                                                                                                                                    cTGATGAGTTTAAAGTGAACATATATATCGGGTGGCTTTTCAAATTAATCCCTTTGATTATGGGCTTAATTTGTATCGCGTTAGGTGGCTTTGTGCTGGAAAGTTCAGGGCAAAGCGAGTATTTCGTCGCGGGTCAtgtg  >  2:205428/1‑140 (MQ=255)

CGCTGAAAAGTAGCGCTCTGCAAAGTAAACCCCGCTATAGTTATGCTATGCATTTGTCTTTAATGATATCTCGTCATTATATTAACAGGATGAAATTATCATTAATGCATATTTCAATATTAGCAGGGATACCTGAGGAGTTTAAAGTGAACATATATATCGGGTGGCTTTTCAAATTAATCCCTTTGATTATGGGCTTAATTTGTATCGCGTTAGGTGGCTTTGTGCTGGAAAGTTCAGGGCAAAGCGAGTATTTCGTCGCGGGTCATGTG  >  NC_000913/3634695‑3634966

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`