BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,730,953	T→C	noncoding (205/1542 nt)	rrsG ←	16S ribosomal RNA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,730,953	0	T	C	100.0%	453.5 / NA	151	noncoding (205/1542 nt)	rrsG	16S ribosomal RNA
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (70/81); total (70/81)

Only 100 of 166 total aligned reads displayed.

GGAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTCCCCCTCTTTGGTCTTGCGACATTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCAGGCAGCTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTTCCTGTTA  >  NC_000913/2730816‑2731088

ggAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGccc                                                                                                                                       <  1:2222599/140‑1 (MQ=17)

ggAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGccc                                                                                                                                       <  1:1851434/140‑1 (MQ=17)

ggAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGccc                                                                                                                                       <  2:1756467/140‑1 (MQ=17)

 gAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGcccc                                                                                                                                      <  2:2072896/140‑1 (MQ=17)

 gAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGcccc                                                                                                                                      <  2:2759338/140‑1 (MQ=17)

     cTGGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGCCCCCctc                                                                                                                                  >  2:955772/1‑140 (MQ=17)

      tGGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGCCCCCctct                                                                                                                                 >  2:191072/1‑140 (MQ=17)

             tgtCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGcccc                                                                                                                                      <  2:1294369/128‑1 (MQ=17)

             tgtCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGCCCCCCTCTTTGGTCt                                                                                                                          >  2:1769560/1‑140 (MQ=17)

             tgtCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGCCCCCCTCTTTGGTCt                                                                                                                          >  2:1440064/1‑140 (MQ=17)

             tgtCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGCCCCCCTCTTTGGTCt                                                                                                                          >  1:2940033/1‑140 (MQ=17)

             tgtCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGCCCCCCTCTTTGGTCt                                                                                                                          >  2:2106705/1‑140 (MQ=17)

             tgtCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGCCCCCCTCTTTGGTCt                                                                                                                          >  1:1858206/1‑140 (MQ=17)

             tgtCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGCCCCCCTCTTTGGTCt                                                                                                                          >  2:2401695/1‑140 (MQ=17)

             tgtCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGCCCCCCTCTTTGGTCt                                                                                                                          >  2:2550863/1‑140 (MQ=17)

              gtCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGccc                                                                                                                                       <  2:2089469/126‑1 (MQ=17)

              gtCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGccc                                                                                                                                       >  1:2089469/1‑126 (MQ=17)

              gtCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGCCCCCCTCTTTGGTCtt                                                                                                                         >  2:1613987/1‑140 (MQ=17)

              gtCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGCCCCCCTCTTTGGTCtt                                                                                                                         >  1:2896783/1‑140 (MQ=17)

               tctcAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGCCCCCCTCTTTGGTCTTg                                                                                                                        <  2:2435016/140‑1 (MQ=17)

                 tcAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGCCCCCCTCTTTGGTCTTGCg                                                                                                                      <  2:1094835/140‑1 (MQ=17)

                    gTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGCCCCCCTCTTTGGTCTTGCGACa                                                                                                                   <  2:2347858/140‑1 (MQ=18)

                    gTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGCCCCCCTCTTTGGTCTTGCGACa                                                                                                                   <  1:191072/140‑1 (MQ=18)

                       ccAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGCCCCCCTCTTTGGTCTTGCGACATTa                                                                                                                >  1:2244995/1‑140 (MQ=21)

                       ccAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGCCCCCCTCTTTGGTCTTGCGACATTa                                                                                                                <  1:2517488/140‑1 (MQ=25)

                       ccAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGCCCCCATCTTTGGTCTTGCGACATTa                                                                                                                >  2:2692470/1‑140 (MQ=21)

                        cAGTGTGGCTGG‑CATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGCCCCCCTCTTTGGTCTTGTGACATTATg                                                                                                              <  2:423556/140‑1 (MQ=255)

                         aGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGCCCCCCTCTTTGGTCTTGCGACATTATg                                                                                                              >  2:1140624/1‑140 (MQ=21)

                         aGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGCCCCCCTCTTTGGTCTTGCGACATTATg                                                                                                              <  2:1668721/140‑1 (MQ=21)

                         aGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGCCCCCCTCTTTGGTCTTGCGACATTATg                                                                                                              <  1:3076897/140‑1 (MQ=25)

                         aGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGCCCCCCTCTTTGGTCTTGCGACATTATg                                                                                                              <  2:1022371/140‑1 (MQ=21)

                         aGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGCCCCCCTCTTTGGTCTTGCGACATTATg                                                                                                              <  1:1776795/140‑1 (MQ=25)

                         aGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGCCCCCCTCTTTGGTCTTGCGACATTATg                                                                                                              <  1:1686909/140‑1 (MQ=25)

                         aGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGCCCCCCTCTTTGGTCTTGCGACATTATg                                                                                                              <  1:1530881/140‑1 (MQ=25)

                         aGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGCCCCCCTCTTTGGTCTTGCGACATTATg                                                                                                              <  1:1441685/140‑1 (MQ=21)

                         aGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGCCCCCCTCTTTGGTCTTGCGACATTATg                                                                                                              <  2:3064338/140‑1 (MQ=25)

                         aGTGCGGATGGTCAGCCTCTCAGACCAGCTAGGGATCGTCGCCCTGGTGAGCCGGTACCCCACCACCAAGCTAATCCCATCTGGGCTTATCCGAGGGCAAAAGGCCCGAAGGCCCCCCTCTTTGGTCTTGCGACATTATg                                                                                                              <  2:3088440/140‑1 (MQ=11)

                          gtgtGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGCCCCCCTCTTTGGTCTTGCGACATTATGc                                                                                                             <  2:2209157/140‑1 (MQ=25)

                          gtgtGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGCCCCCCTCTTTGGTCTTGCGACATTATGc                                                                                                             <  2:3007052/140‑1 (MQ=21)

                           tgtgGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGCCCCCCTCTTTGGTCTTGCGACATTATGCg                                                                                                            <  2:1939875/140‑1 (MQ=25)

                             tgGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGCCCCCCTCTTTGGTCTTGCGACATTATGCGGt                                                                                                          <  1:250429/140‑1 (MQ=25)

                             tgGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGCCCCCCTCTTTGGTCTTGCGACATTATGCGGt                                                                                                          <  2:2896783/140‑1 (MQ=25)

                               gCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGCCCCCCTCTTTGGTCTTGCGACATTATg                                                                                                              <  1:1524871/134‑1 (MQ=25)

                               gCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGCCCCCCTCTTTGGTCTTGCGACATTATg                                                                                                              >  2:1524871/1‑134 (MQ=21)

                               gCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGCCCCCCTCTTTGGTCTTGCGACATTATGCGGTAt                                                                                                        >  2:1014608/1‑140 (MQ=21)

                               gCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGCCCCCCTCTTTGGTCTTGCGACATTATGCGGTAt                                                                                                        >  1:1956238/1‑140 (MQ=21)

                               gCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGCCCCCCTCTTTGGCCTTGCGACATTATGCGGTAt                                                                                                        >  2:2051688/1‑140 (MQ=21)

                               gCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTAAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGCCCCCCTCTTTGGTCTTGCGACATTATGCGGTAt                                                                                                        >  1:2553196/1‑140 (MQ=19)

                                  ggTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGCCCCCCTCTTTGGTCTTGCGACATTATGCGGTATTAg                                                                                                     <  1:1140624/140‑1 (MQ=25)

                                     cATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGCCCCCCTCTTTGGTCTTGCGACATTATGCGGTATTAGCTa                                                                                                  <  2:2940033/140‑1 (MQ=25)

                                       tCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGCCCCCCTCTTTGGTCTTGCGACATTATGCGGTATTAGCTAcc                                                                                                >  1:70703/1‑140 (MQ=21)

                                            tcAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGCCCCCCTCTTTGGTCTTGCGACATTATGCGGTATTAGCTACCGTTTc                                                                                           <  1:306332/140‑1 (MQ=25)

                                              aGACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGCCCCCCTCTTTGGTCTTGCGACATTATGCGGTATTAGCTACCGTTTCCa                                                                                         <  2:848435/140‑1 (MQ=25)

                                              aGACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGCCCCCCTCTTTGGTCTTGCGACATTATGCGGTATTAGCTACCGTTTCCa                                                                                         >  1:418207/1‑140 (MQ=21)

                                                 ccAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGCCCCCCTCTTTGGTCTTGCGACATTATGCGGTATTAGCTACCGTTTCCagta                                                                                      >  1:2570272/1‑140 (MQ=21)

                                                   aGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGCCCCCCTCTTTGGTCTTGCGACATTATGCGGTATTAGCTACCGTTTCCagtagt                                                                                    >  2:2678721/1‑140 (MQ=21)

                                                     cTAGGGATCGTCGCCTTGGTGAGCCGTTACCCAACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGCCCCCCTCTTTGGTCTTGCGACATTATGCGGTATTAGCTACCGTTTCCAGTAGTTa                                                                                  >  2:2156583/1‑140 (MQ=19)

                                                          gATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGCCCCCCTCTTTGGTCTTGCGACATTATGCGGTATTAGCTACCGTTTCCAGTAGTTATcccc                                                                             <  1:1430365/140‑1 (MQ=21)

                                                          gATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGCCCCCCTCTTTGGTCTTGCGACATTATGCGGTATTAGCTACCGTTTCCAGTAGTTATcccc                                                                             <  2:1858206/140‑1 (MQ=21)

                                                            tcgtcgCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGCCCCCCTCTTTGGTCTTGCGACATTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCt                                                                           <  1:663712/140‑1 (MQ=21)

                                                              gtcgCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGCCCCCCTCTTTGGTCTTGCGACATTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTcc                                                                         >  1:995232/1‑140 (MQ=21)

                                                               tcgCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGCCCCCCTCTTTGGTCTTGCGACATTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCa                                                                        >  1:1242060/1‑140 (MQ=21)

                                                                      ggTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGCCCCCCTCTTTGGTCTTGCGACATTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCAGGCa                                                                 >  2:636516/1‑140 (MQ=21)

                                                                       gTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGCCCCCCTCTTTGGTCTTGCGACATTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCAGGCAg                                                                <  1:2849408/140‑1 (MQ=21)

                                                                       gTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGCCCCCCTCTTTGGTCTTGCGACATTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCAGGCAg                                                                <  1:264128/140‑1 (MQ=21)

                                                                       gTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGCCCCCCTCTTTGGTCTTGCGACATTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCAGGCAg                                                                <  1:971003/140‑1 (MQ=21)

                                                                       gTGAGCCGTTACCCAACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGCCCCCCTCTTTGGTCTTGCGACATTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCAGGCAg                                                                <  1:2156583/140‑1 (MQ=21)

                                                                        tGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGCCCCCCTCTTTGGTCTTGCGACATTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCAGGCAGc                                                               <  2:689834/140‑1 (MQ=25)

                                                                        tGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGCCCCCCTCTTTGGTCTTGCGACATTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCAGGCAGc                                                               <  2:2261712/140‑1 (MQ=25)

                                                                          aGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGCCCCCCTCTTTGGTCTTGCGACATTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCAGGCAGCtt                                                             >  1:1634577/1‑140 (MQ=37)

                                                                            ccGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGCCCCCCTCTTTGGTCTTGCGACATTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCAGGCAGCTTcc                                                           >  2:1062635/1‑140 (MQ=37)

                                                                                tACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGCCCCCCTCTTTGGTCTTGCGACATTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCAGGCAGCTTCCCAGa                                                       >  1:2973094/1‑140 (MQ=37)

                                                                                tACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGCCCCCCTCTTTGGTCTTGCGACATTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCAGGCAGCTTCCCAGa                                                       <  2:732856/140‑1 (MQ=38)

                                                                                tACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGCCCCCCTCTTTGGTCTTGCGACATTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCAGGCAGCTTCCCAGa                                                       <  1:1014608/140‑1 (MQ=37)

                                                                                  ccccACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGCCCCCCTCTTTGGTCTTGCGACATTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCAGGCAGCTTCCCAGACa                                                     <  1:2550863/140‑1 (MQ=38)

                                                                                       ccaACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGCCCCCCTCTTTGGTCTTGCGACATTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCAGGCa                                                                 >  1:676118/1‑123 (MQ=25)

                                                                                       ccaACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGCCCCCCTCTTTGGTCTTGCGACATTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCAGGCAGCTTCCCAGACATTACt                                                >  1:2380634/1‑140 (MQ=37)

                                                                                        caacaaGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGCCCCCCTCTTTGGTCTTGCGACATTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCAGGCAGCTTCCCAGACATTACTc                                               <  1:955772/140‑1 (MQ=38)

                                                                                            aaGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGCCCCCCTCTTTGGTCTTGCGACATTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCAGGCAGCTTCCCAGACATTACTCAccc                                           >  1:800963/1‑140 (MQ=25)

                                                                                                   tCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGCCCCCCTCTTTGGTCTTGCGACATTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCAGGCAGCTTCCCAGACATTACTCACCCGTCCGcc                                    >  1:2030474/1‑140 (MQ=21)

                                                                                                    cccATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGCCCCCCTCTTTGGCCTTGCGACATTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCAGGCAGCTTCCCAGACATTACTCACCCGTCCGCCa                                   <  1:2051688/140‑1 (MQ=21)

                                                                                                        tCTGGGCACATCCGATGGCAAGAGGCCCGAAGGCCCCCCTCTTTGGTCTTGCGACATTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCAGGCAGCTTCCCAGACATTACTCACCCGTCCGCCACTCg                               >  1:2175791/1‑140 (MQ=21)

                                                                                                        tCTGGGCACATCCGATGGCAAGAGGCCCGAAGGCCCCCCTCTTTGGTCTTGCGACATTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCAGGCAGCTTCCCAGACATTACTCACCCGTCCGCCACTCg                               >  1:1424708/1‑140 (MQ=21)

                                                                                                        tCTGGGCACATCCGATGGCAAGAGGCCCGAAGGCCCCCCTCTTTGGTCTTGCGACATTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCAGGCAGCTTCCCAGACATTACTCACCCGTCCGCCACTCg                               >  2:913970/1‑140 (MQ=21)

                                                                                                            ggCACATCCGATGGCAAGAGGCCCGAAGGCCCCCCTCTTTGGTCTTGCGACATTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCAGGCAGCTTCCCAGACATTACTCACCCGTCCGCCACTCGt                              <  1:104043/137‑1 (MQ=21)

                                                                                                            ggCACATCCGATGGCAAGAGGCCCGAAGGCCCCCCTCTTTGGTCTTGCGACATTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCAGGCAGCTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAg                           >  1:597663/1‑140 (MQ=21)

                                                                                                              cacaTCCGATGGCAAGAGGCCCGAAGGCCCCCCTCTTTGGTCTTGCGACATTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCAGGCAGCTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCg                         >  2:2390570/1‑140 (MQ=25)

                                                                                                                 aTCCGATGGCAAGAGGCCCGAAGGCCCCCCTCTTTGGTCTTGCGACATTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCAGGCAGCTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAag                      <  2:1956238/140‑1 (MQ=38)

                                                                                                                 aTCCGATGGCAAGAGGCCCGAAGGCCCCCCTCTTTGGTCTTGCGACATTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCAGGCAGCTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAag                      >  2:798908/1‑140 (MQ=37)

                                                                                                                   ccGATGGCAAGAGGCCCGAAGGCCCCCCTCTTTGGTCTTGCGACATTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCAGGCAGCTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAagca                    >  1:1215580/1‑140 (MQ=255)

                                                                                                                           aaGAGGCCCGAAGGCCCCCCTCTTTGGTCTTGCGACATTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCAGGCAGCTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAgctg            <  2:2570272/140‑1 (MQ=38)

                                                                                                                           aaGAGGCCCGAAGGCCCCCCTCTTTGGTCTTGCGACATTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCAGGCAGCTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAgctg            <  2:2553196/140‑1 (MQ=38)

                                                                                                                           aaGAGGCCCGAAGGCCCCCCTCTTTGGTCTTGCGACATTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCAGGCAGCTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAgctg            <  2:2030474/140‑1 (MQ=38)

                                                                                                                           aaGAGGCCCGAAGGCCCCCCTCTTTGGTCTTGCGACATTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCAGGCAGCTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAgctg            <  2:597663/140‑1 (MQ=38)

                                                                                                                           aaGAGGCCCGAAGGCCCCCCTCTTTGGTCTTGCGACATTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCAGGCAGCTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAgctg            <  2:1242060/140‑1 (MQ=38)

                                                                                                                           aaGAGGCCCGAAGGCCCCCCTCTTTGGTCTTGCGACATTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCAGGCAGCTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAgctg            <  1:859188/140‑1 (MQ=38)

                                                                                                                             gagGCCCGAAGGCCCCCCTCTTTGGTCTTGCGACATTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCAGGCAGCTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAgctgct          >  1:2115524/1‑140 (MQ=255)

                                                                                                                                gCCCGAAGGCCCCCCTCTTTGGTCTTGCGACATTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCAGGCAGCTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTTcc       >  1:2971288/1‑140 (MQ=255)

                                                                                                                                   cGAAGGCCCCCCTCTTTGGTCTTGCGACATTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCAGGCAGCTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAgctgc           <  2:883112/133‑1 (MQ=255)

                                                                                                                                   cGAAGGCCCCCCTCTTTGGTCTTGCGACATTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCAGGCAGCTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAgctgc           >  1:883112/1‑133 (MQ=255)

GGAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTCCCCCTCTTTGGTCTTGCGACATTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCAGGCAGCTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTTCCTGTTA  >  NC_000913/2730816‑2731088

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`