| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,696,654 | C→A | A66E (GCG→GAG) | bcsE → | c‑di‑GMP‑binding protein BcsE |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,696,654 | 0 | C | A | 99.2% | 882.8 / ‑0.7 | 246 | A66E (GCG→GAG) | bcsE | c‑di‑GMP‑binding protein BcsE |
| Reads supporting (aligned to +/- strand): ref base C (1/1); new base A (100/144); total (101/145) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.60e-01 | |||||||||||
Only 100 of 252 total aligned reads displayed.
CGACATATGCCAGCAGGCGGCGTCTGGTGGTTTAACGTCGATCGCCATGAAGATGCTATCAGTCTGGCGAATCAAACAATTGCATCCCAGGCTGAAACCGCACACGTCGCGGTCATTAGCATGGACAGCGATCCGGCGAAAATCTTTCAATTAGATGATTCTCAAGGGCCGG‑AAAAAATAAAATTATTTTCAATGCTAAATCATGAAAAAGGTCTATACTATTTGACCCGTGATTTGCAGTGTTCTATTGATCCCCATAATTACCTTTTTATT > NC_000913/3696518‑3696790 | cGACATATGCCAGCAGGCGGCGTCTGGTGGTTTAACGTCGATCGCCATGAAGATGCTATCAGTCTGGCGAATCAAACAATTGCATCCCAGGCTGAAACCGCACACGTCGCGGTCATTAGCATGGACAGCGATCCGGAGaa > 2:2882426/1‑140 (MQ=255)cGACATATGCCAGCAGGCGGCGTCTGGTGGTTTAACGTCGATCGCCATGAAGATGCTATCAGTCTGGCGAATCAAACAATTGCATCCCAGGCTGAAACCGCACACGTCGCGGTCATTAGCATGGACAGCGATCCGGAGaa > 1:320812/1‑140 (MQ=255)cGACATATGCCAGCAGGCGGCGTCTGGTGGTTTAACGTCGATCGCCATGAAGATGCTATCAGTCTGGCGAATCAAACAATTGCATCCCAGGCTGAAACCGCACACGTCGCGGTCATTAGCATGGACAGCGATCCGGAGaa > 2:1413382/1‑140 (MQ=255)cGACATATGCCAGCAGGCGGCGTCTGGTGGTTTAAAGTCGATCGCCATGAAGATGCTATCAGTCTGGCGAATCAAACAATTGCATCCCAGGCTGAAACCGCACACGTCGCGGTCATTAGCATGGACAGCGATCCGGAGaa > 2:675448/1‑140 (MQ=255) aCATATGCCAGCAGGCGGCGTCTGGTGGTTTAACGTCGATCGCCATGAAGATGCTATCAGTCTGGCGAATCAAACAATTGCATCCCAGGCTGAAACCGCACACGTCGCGGTCATTAGCATGGACAGCGATCCGGAGaaaa > 2:1727870/1‑140 (MQ=255) tatGCCAGCAGGCGGCGTCTGGTGGTTTAACGTCGATCGCCATGAAGATGCTATCAGTCTGGCGAATCAAACAATTGCATCCCAGGCTGAAACCGCACACGTCGCGGTCATTAGCATGGACAGCGATCCGGAGAAAATCt < 2:2326178/140‑1 (MQ=255) tatGCCAGCAGGCGGCGTCTGGTGGTTTAACGTCGATCGCCATGAAGATGCTATCAGTCTGGCGAATCAAACAATTGCATCCCAGGCTGAAACCGCACACGTCGCGGTCATTAGCATGGACAGCGATCCGGAGAAAATCt > 2:1485355/1‑140 (MQ=255) tatGCCAGCAGGCGGCGTCTGGTGGTTTAACGTCGATCGCCATGAAGATGCTATCAGTCTGGCGAATCAAACAATTGCATCCCAGGCTGAAACCGCACACGTCGCGGTCATTAGCATGGACAGCGATCCGGAGAAAATCt < 1:2067746/140‑1 (MQ=255) tatGCCAGCAGGCGGCGTCTGGTGGTTTAACGTCGATCGCCATGAAGATGCTATCAGTCTGGCGAATCAAACAATTGCATCCCAGGCTGAAACCGCACACGTCGCGGTCATTAGCATGGACAGCGATCCGGAGAAAATCt < 1:1727870/140‑1 (MQ=255) atGCCAGCAGGCGGCGTCTGGTGGTTTACCGTTGATCGCCATGAAGATGCTATCAGTCTGGCGAATCAAACAATTGCATCCCAGGCTGAAACCGCACACGTCGCGGTCATTAGCATGGACAGCGATCCGGAGAAAATCtt < 1:2031577/140‑1 (MQ=255) cagGCGGCGTCTGGTGGTTTAACGTCGATCGCCATGAAGATGCTATCAGTCTGGCGAATCAAACAATTGCATCCCAGGCTGAAACCGCACACGTCGCGGTCATTAGCATGGACAGCGATCCGGAGAAAATCTTTCAATTa > 1:2839820/1‑140 (MQ=255) agGCGGCGTCTGGTGGTTTAACGTCGATCGCCATGAAGATGCTATCAGTCTGGCGAATCAAACAATTGCATCCCAGGCTGAAACCGCACACGTCGCGGTCATTAGCATGGACAGCGATCCGGAGAAAATCTTTCAATTAg > 1:2891995/1‑140 (MQ=255) ggcggcGTCTGGTGGTTTAACGTCGATCGCCATGAAGATGCTATCAGTCTGGCGAATCAAACAATTGCATCCCAGGCTGAAACCGCACACGTCGCGGTCATTAGCATGGACAGCGATCCGGAGAAAATCTTTCAATTAga < 2:906851/140‑1 (MQ=255) ggcggcGTCTGGTGGTTTAACGTCGATCGCCATGAAGATGCTATCAGTCTGGCGAATCAAACAATTGCATCCCAGGCTGAAACCGCACACGTCGCGGTCATTAGCATGGACAGCGATCCGGAGAAAATCTTTCAATTAga < 2:597093/140‑1 (MQ=255) ggcgTCTGGTGGTTTAACGTCGATCGCCATGAAGATGCTATCAGTCTGGCGAATCAAACAATTGCATCCCAGGCTGAAACCGCACACGTCGCGGTCATTAGCATGGACAGCGATCCGGAGAAAATCTTTCAATTAgatga < 1:2630951/140‑1 (MQ=255) ggcgTCTGGTGGTTTAACGTCGATCGCCATGAAGATGCTATCAGTCTGGCGAATCAAACAATTGCATCCCAGGCTGAAACCGCACACGTCGCGGTCATTAGCATGGACAGCGATCCGGAGAAAATCTTTCAATTAgatga > 1:1698426/1‑140 (MQ=255) ggcgTCTGGTGGTTTAACGTCGATCGCCATGAAGATGCTATCAGTCTGGCGAATCAAACAATTGCATCCCAGGCTGAAACCGCACACGTCGCGGTCATTAGCATGGACAGCGATCCGGAGAAAATCTTTCAATTAga < 2:278161/137‑1 (MQ=255) ggcgTCTGGTGGTTTAACGTCGATCGCCATGAAGATGCTATCAGTCTGGCGAATCAAACAATTGCATCCCAGGCTGAAACCGCACACGTCGCGGTCATTAGCATGGACAGCGATCCGGAGAAAATCTTTCAATTAga > 1:278161/1‑137 (MQ=255) gtggtTTAACGTCGATCGCCATGAAGATGCTATCAGTCTGGCGAATCAAACAATTGCATCCCAGGCTGAAACCGCACACGTCGCGGTCATTAGCATGGACAGCGATCCGGCGAAAATCTTTCAATTAga < 1:929173/129‑1 (MQ=255) gATCGCCATGAAGATGCTATCAGTCTGGCGAATCAAACAATTGCATCCCAGGCTGAAACCGCACACGTCGCGGTCATTAGCATGGACAGCGATCCGGAGAAAATCTTTCAATTAGATGATTCTCAAGGGCCGG‑AAaaaat > 2:384748/1‑140 (MQ=255) aTCGCCATGAAGATGCTATCAGTCTGGCGAATCAAACAATTGCATCCCAGGCTGAAACCGCACACGTCGCGGTCATTAGCATGGACAGCGATCCGGAGAAAATCTTTCAATTAGATGATTCTCAAGGGCCGG‑AAaaaata > 2:1985665/1‑140 (MQ=255) gCCATGAAGATGCTATCAGTCTGGCGAATCAAACAATTGCATCCCAGGCTGAAACCGCACACGTCGCGGTCATTAGCATGGACAGCGATCCGGAGAAAATCTTTCAATTAGATGATTCTCAAGGGCCGG‑AAaaaataaaa < 2:439165/140‑1 (MQ=255) aGATGCTATCAGTCTGGCGAATCAAACAATTGCATCCCATGCTGAAACCGCACACGTCGCGGTCATTAGCATGGACAGCGATCCGGAGAAAATCTTTCAATTAGATGATTCTCAAGGGCCGG‑AAAAAATAAAATTAtttt < 1:675448/140‑1 (MQ=255) aGATGCTATCAGTCTGGCGAATCAAACAATTGCATCCCAGGCTGAAACCGCACACGTCGCGGTCATTAGCATGGACAGCGATCCGGAGAAAATCTTTCAATTAGATGATTCTCAAGGGCCGG‑AAAAAATAAAATTAtttt < 2:1074929/140‑1 (MQ=255) aGATGCTATCAGTCTGGCGAATCAAACAATTGCATCCCAGGCTGAAACCGCACACGTCGCGGTCATTAGCATGGACAGCGATCCGGAGAAAATCTTTCAATTAGATGATTCTCAAGGGCCGG‑AAAAAATAAAATTAtttt < 1:2252652/140‑1 (MQ=255) gCTATCAGTCTGGCGAATCAAACAATTGCATCCCAGGCTGAAACCGCACACGTCGCGGTCATTAGCATGGACAGCGATCCGGAGAAAATCTTTCAATTAGATGATTCTCAAGGGCCGG‑AAAAAATAAAATTATTTTCAAt > 1:1004284/1‑140 (MQ=255) aTCAGTCTGGCGAATCAAACAATTGCATCCCAGGCTGAAACCGCACACGTCGCGGTCATTAGCATGGACAGCGATCCGGAGAAAATCTTTCAATTAGATGATTCTCAAGGGCCGG‑AAAAAATAAAATTATTTTCAATGCt < 1:64430/140‑1 (MQ=255) aTCAGTCTGGCGAATCAAACAATTGCATCCCAGGCTGAAACCGCACACGTCGCGGTCATTAGCATGGACAGCGATCCGGAGAAAATCTTTCAATTAGATGATTCTCAAGGGCCGG‑AAAAAATAAAATTATTTTCAATGCt < 1:1659033/140‑1 (MQ=255) tCTGGCGAATCAAACAATTGCATCCCAGGCTGAAACCGCACACGTCGCGGTCATTAGCATGGACAGCGATCCGGAGAAAATCTTTCAATTAGATGATTCTCAAGGGCCGG‑AAAAAATAAAATTAtttt < 2:2065023/128‑1 (MQ=255) tCTGGCGAATCAAACAATTGCATCCCAGGCTGAAACCGCACACGTCGCGGTCATTAGCATGGACAGCGATCCGGAGAAAATCTTTCAATTAGATGATTCTCAAGGGCCGG‑AAAAAATAAAATTATTTTCAATGCTAAATc > 2:2979294/1‑140 (MQ=255) tGGCGAATCAAACAATTGCATCCCAGGCTGAAACCGCACACGTCGCGGTCATTAGCATGGACAGCGATCCGGAGAAAATCTTTCAATTAGATGATTCTCAAGGGCCGG‑AAAAAATAAAATTATTTTCAATGCTAAATCAt > 2:178638/1‑140 (MQ=255) tGGCGAATCAAACAATTGCATCCCAGGCTGAAACCGCACACGTCGCGGTCATTAGCATGGACAGCGATCCGGAGAAAATCTTTCAATTAGATGATTCTCAAGGGCCGG‑AAAAAATAAAATTATTTTCAATGCTAAATCAt > 1:2928453/1‑140 (MQ=255) cGAATCAAACAATTGCATCCCAGGCTGAAACCGCACACGTCGCGGTCATTAGCATGGACAGCGATCCGGAGAAAATCTTTCAATTAGATGATTCTCAAGGGCCGG‑AAAAAATAAAATTATTTTCAATGCTAAATCATGaa > 1:1137620/1‑140 (MQ=255) gAATCAAACAATTGCATCCCAGGCTGAAACCGCACACGTCGCGGTCATTAGCATGGACAGCGATCCGGAGAAAATCTTTCAATTAGATGATTCTCAAGGGCCGG‑AAAAAATAAAATTATTTTCAATGCTAAATCATGaaa < 1:1809258/140‑1 (MQ=255) gAATCAAACAATTGCATCCCAGGCTGAAACCGCACACGTCGCGGTCATTAGCATGGACAGCGATCCGGAGAAAATCTTTCAATTAGATGATTCTCAAGGGCCGG‑AAAAAATAAAATTATTTTCAATGCTAAATCATGaaa < 2:3073077/140‑1 (MQ=255) gAATCAAACAATTGCATCCCAGGCTGAAACCGCACACGTCGCGGTCATTAGCATGGACAGCGATCCGGAGAAAATCTTTCAATTAGATGATTCTCAAGGGCCGG‑AAAAAATAAAATTATTTTCAATGCTAAATCATGaaa < 2:1698426/140‑1 (MQ=255) gAATCAAACAATTGCATCCCAGGCTGAAACCGCACACGTCGCGGTCATTAGCATGGACAGCGATCCGGAGAAAATCTTTCAATTAGATGATTCTCAAGGGCCGG‑AAAAAATAAAATTATTTTCAATGCTAAATCATGaaa < 1:47747/140‑1 (MQ=255) gAATCAAACAATTGCATCCCAGGCTGAAACCGCACACGTCGCGGTCATTAGCATGGACAGCGATCCGGAGAAAATCTTTCAATTAGATGATTCTCAAGGGCCGG‑AAAAAATAAAATTATTTTCAATGCTAAATCATGaaa < 1:2308786/140‑1 (MQ=255) gAATCAAACAATTGCATCCCAGGCTGAAACCGCACACGTCGCGGTCATTAGCATGGACAGCGATCCGGAGAAAATCTTTCAATTAGATGATTCTCAAGGGCCGG‑AAAAAATAAAATTATTTTCAATGCTAAATCATGaaa < 1:2326217/140‑1 (MQ=255) gAATCAAACAATTGCATCCCAGGCTGAAACCGCACACGTCGCGGTCATTAGCATGGACAGCGATCCGGAGAAAATCTTTCAATTAGATGATTCTCAAGGGCCGG‑AAAAAATAAAATTATTTTCAATGCTAAATCATGaaa < 2:729601/140‑1 (MQ=255) gAATCAAACAATTGCATCCCAGGCTGAAACCGCACACGTCGCGGTCATTAGCATGGACAGCGATCCGGAGAAAATCTTTCAATTAGATGATTCTCAAGGGCCGG‑AAAAAATAAAATTATTTTCAATGCTAAATCATGaaa < 1:1838388/140‑1 (MQ=255) aTCAAACAATTGCATCCCAGGCTGAAACCGCACACGTCGCGGTCATTAGCATGGACAGCGATCCGGAGAAAATCTTTCAATTAGATGATTCTCAAGGGCCGG‑AAAAAATAAAATTATTTTCAATGCTAAATCATGaaaaa > 2:183699/1‑140 (MQ=255) tCAAACAATTGCATCCCAGGCTGAAACCGCACACGTCGCGGTCATTAGCATGGACAGCGATCCGGAGAAAATCTTTCAATTAGATGATTCTCAAGGGCCGG‑AAAAAATAAAATTATTTTCAATGCTAAATCATGAAAAAg > 2:1205758/1‑140 (MQ=255) tCAAACAATTGCATCCCAGGCTGAAACCGCACACGTCGCGGTCATTAGCATGGACAGCGATCCGGAGAAAATCTTTCAATTAGATGATTCTCAAGGGCCGG‑AAAAAATAAAATTATTTTCAATGCTAAATCATGAAAAAg < 2:174184/140‑1 (MQ=255) tCAAACAATTGCATCCCAGGCTGAAACCGCACACGTCGCGGTCATTAGCATGGACAGCGATCCGGAGAAAATCTTTCAATTAGATGATTCTCAAGGGCCGG‑AAAAAATAAAATTATTTTCAATGCTAAATCATGAAAAAg > 2:1606996/1‑140 (MQ=255) cAAACAATTGCATCCCAGGCTGAAACCGCACACGTCGCGGTCATTAGCATGGACAGCGATCCGGAGAAAATCTTTCAATTAGATGATTCTCAAGGGCCGG‑AAAAAATAAAATTATTTTCAATGCTAAATCATGAAAAAgg > 1:2206824/1‑140 (MQ=255) aaaCAATTGCATCCCAGGCTGAAACCGCACACGTCGCGGTCATTAGCATGGACAGCGATCCGGAGAAAATCTTTCAATTAGATGATTCTCAAGGGCCGG‑AAAAAATAAAATTATTTTCAATGCTAAATCATGAAAAAGGt < 2:339373/140‑1 (MQ=255) aaaCAATTGCATCCCAGGCTGAAACCGCACACGTCGCGGTCATTAGCATGGACAGCGATCCGGAGAAAATCTTTCAATTAGATGATTCTCAAGGGCCGG‑AAAAAATAAAATTATTTTCAATGCTAAATCATGAAAAAGGt < 1:1606996/140‑1 (MQ=255) aaaCAATTGCATCCCAGGCTGAAACCGCACACGTCGCGGTCATTAGCATGGACAGCGATCCGGAGAAAATCTTTCAATTAGATGATTCTCAAGGGCCGG‑AAAAAATAAAATTATTTTCAATGCTAAATCATGAAAAAGGt < 1:2844586/140‑1 (MQ=255) cAATTGCATCCCAGGCTGAAACCGCACACGTCGCGGTCATTAGCATGGACAGCGATCCGGAGAAAATCTTTCAATTAGATGATTCTCAAGGGCCGG‑AAAAAATAAAATTATTTTCAATGCTAAATCATGAAAAAGGTCta < 2:221827/140‑1 (MQ=255) ttGCATCCCAGGCTGAAACCGCACACGTCGCGGTCATTAGCATGGACAGCGATCCGGAGAAAATCTTTCAATTAGATGATTCTCAAGGGCCGG‑AAAAAATAAAATTATTTTCAATGCTAAATCATGAAAAAGGTCTATAc > 1:2441219/1‑140 (MQ=255) tGCATCCCAGGCTGAAACCGCACACGTCGCGGTCATTAGCATGGACAGCGATCCGGAGAAAATCTTTCAATTAGATGATTCTCAAGGGCCGG‑AAAAAATAAAATTATTTTCAATGCTAAATCATGAAAAAGGTCTATACt > 1:1087398/1‑140 (MQ=255) gCATCCCAGGCTGAAACCGCACACGTCGCGGTCATTAGCATGGACAGCGATCCGGAGAAAATCTTTCAATTAGATGATTCTCAAGGGCCGG‑AAAAAATAAAATTATTTTCAATGCTAAATCATGAAAAAGGTCTATACTa > 2:188058/1‑140 (MQ=255) cAGGCTGAAACCGCACACGTCGCGGTCATTAGCATGGACAGCGATCCGGAGAAAATCTTTCAATTAGATGATTCTCAAGGGCCGG‑AAAAAATAAAATTATTTTCAATGCTAAATCATGAAAAAGGTCTATACTATTTGAc < 1:867139/140‑1 (MQ=255) cAGGCTGAAACCGCACACGTCGCGGTCATTAGCATGGACAGCGATCCGGAGAAAATCTTTCAATTAGATGATTCTCAAGGGCCGG‑AAAAAATAAAATTATTTTCAATGCTAAATCATGAAAAAGGTCTATACTATTTGAc < 1:485923/140‑1 (MQ=255) ggCTGAAACCGCACACGTCGCGGTCATTAGCATGGACAGCGATCCGGAGAAAATCTTTCAATTAGATGATTCTCAAGGGCCGG‑AAAAAATAAAATTATTTTCAATGCTAAATCATGAAAAAGGTCTATACTATTTGAccc > 2:846545/1‑140 (MQ=255) ggCTGAAACCGCACACGTCGCGGTCATTAGCATGGACAGCGATCCGGAGAAAATCTTTCAATTAGATGATTCTCAAGGGCCGG‑AAAAAATAAAATTATTTTCAATGCTAAATCATGAAAAAGGTCTATACTATTTGAccc > 2:2196232/1‑140 (MQ=255) ggCTGAAACCGCACACGTCGCGGTCATTAGCATGGACAGCGATCCGGAGAAAATCTTTCAATTAGATGATTCTCAAGGGCCGG‑AAAAAATAAAATTATTTTCAATGCTAAATCATGAAAAAGGTCTATACTATTTGAc > 2:2843588/1‑138 (MQ=255) aaCCGCACACGTCGCGGTCATTAGCATGGACAGCGATCCGGAGAAAATCTTTCAATTAGATGATTCTCAAGGGCCGG‑AAAAAATAAAATTATTTTCAATGCTAAATCATGAAAAAGGTCTATACTATTTGACCCGTGAtt > 2:1551695/1‑140 (MQ=255) aaCCGCACACGTCGCGGTCATTAGCATGGACAGCGATCCGGAGAAAATCTTTCAATTAGATGATTCTCAAGGGCCGA‑AAAAAATAAAATTATTTTCAATGCTAAATCATGAAAAAGGTCTATACTATTTGACCCGTGAtt > 1:1943853/1‑140 (MQ=255) aCCGCACACGTCGCGGTCATTAGCATGGACAGCGATCCGGAGAAAATCTTTCAATTAGATGATTCTCAAGGGCCGG‑AAAAAATAAAATTATTTTCAATGCTAAATCATGAAAAAGGTCTATACTATTTGACCCGTGAttt < 2:2696451/140‑1 (MQ=255) ccGCACACGTCGCGGTCATTAGCATGGACAGCGATCCGGAGAAAATCTTTCAATTAGATGATTCTCAAGGGCCGG‑AAAAAATAAAATTATTTTCAATGCTAAATCATGAAAAAGGTCTATACTATTTGACCCGTGATTTg < 2:2906176/140‑1 (MQ=255) ccGCACACGTCGCGGTCATTAGCATGGACAGCGATCCGGAGAAAATCTTTCAATTAGATGATTCTCAAGGGCCGG‑AAAAAATAAAATTATTTTCAATGCTAAATCATGAAAAAGGTCTATACTATTTGACCCGTGATTTg < 2:2371466/140‑1 (MQ=255) ccGCACACGTCGCGGTCATTAGCATGGACAGCGATCCGGAGAAAATCTTTCAATTAGATGATTCTCAAGGGCCGG‑AAAAAATAAAATTATTTTCAATGCTAAATCATGAAAAAGGTCTATACTATTTGACCCGTGATTTg < 1:56569/140‑1 (MQ=255) ccGCACACGTCGCGGTCATTAGCATGGACAGCGATCCGGAGAAAATCTTTCAATTAGATGATTCTCAAGGGCCGG‑AAAAAATAAAATTATTTTCAATGCTAAATCATGAAAAAGGTCTATACTATTTGACCCGTGATTTg > 2:2169422/1‑140 (MQ=255) ccGCACACGTCGCGGTCATTAGCATGGACAGCGATCCGGAGAAAATCTTTCAATTAGATGATTCTCAAGGGCCGG‑AAAAAATAAAATTATTTTCAATGCTAAATCATGAAAAAGGTCTATACTATTTGACCCGTGATTTg < 1:1472808/140‑1 (MQ=255) ccGCACACGTCGCGGTCATTAGCATGGACAGCGATCCGGAGAAAATCTTTCAATTAGATGATTCTCAAGGGCCGG‑AAAAAATAAAATTATTTTCAATGCTAAATCATGAAAAAGGTCTATACTATTTGACCCGTGATTTg < 1:188058/140‑1 (MQ=255) gCACACGTCGCGGTCATTAGCATGGACAGCGATCCTGAGAAAATCTTTCAATTAGATGATTCTCAAGGGCCGG‑AAAAAATAAAATTATTTTCAATGCTAAATCATGAAAAAGGTCTATACTATTTGACCCGTGATTTGCa < 2:2544430/140‑1 (MQ=255) gCACACGTCGCGGTCATTAGCATGGACAGCGATCCGGAGAAAATCTTTCAATTAGATGATTCTCAAGGGCCGG‑AAAAAATAAAATTATTTTCAATGCTAAATCATGAAAAAGGTCTATACTATTTGACCCGTGATTTGCa < 1:1348814/140‑1 (MQ=255) gCACACGTCGCGGTCATTAGCATGGACAGCGATCCGGAGAAAATCTTTCAATTAGATGATTCTCAAGGGCCGG‑AAAAAATAAAATTATTTTCAATGCTAAATCATGAAAAAGGTCTATACTATTTGACCCGTGATTTGCa < 1:2618715/140‑1 (MQ=255) gCACACGTCGCGGTCATTAGCATGGACAGCGATCCGGAGAAAATCTTTCAATTAGATGATTCTCAAGGGCCGG‑AAAAAATAAAATTATTTTCAATGCTAAATCATGAAAAAGGTCTATACTATTTGACCCGTGATTTGCa < 1:1232921/140‑1 (MQ=255) gCACACGTCGCGGTCATTAGCATGGACAGCGATCCGGAGAAAATCTTTCAATTAGATGATTCTCAAGGGCCGG‑AAAAAATAAAATTATTTTCAATGCTAAATCATGAAAAAGGTCTATACTATTTGACCCGTGATTTGCa < 1:1413382/140‑1 (MQ=255) gCACACGTCGCGGTCATTAGCATGGACAGCGATCCGGAGAAAATCTTTCAATTAGATGATTCTCAAGGGCCGG‑AAAAAATAAAATTATTTTCAATGCTAAATCATGAAAAAGGTCTATACTATTTGACCCGTGATTTGCa < 1:1433827/140‑1 (MQ=255) gCACACGTCGCGGTCATTAGCATGGACAGCGATCCGGAGAAAATCTTTCAATTAGATGATTCTCAAGGGCCGG‑AAAAAATAAAATTATTTTCAATGCTAAATCATGAAAAAGGTCTATACTATTTGACCCGTGATTTGCa < 2:1259595/140‑1 (MQ=255) gCACACGTCGCGGTCATTAGCATGGACAGCGATCCGGAGAAAATCTTTCAATTAGATGATTCTCAAGGGCCGG‑AAAAAATAAAATTATTTTCAATGCTAAATCATGAAAAAGGTCTATACTATTTGACCCGTGATTTGCa < 2:1120601/140‑1 (MQ=255) gCACACGTCGCGGTCATTAGCATGGACAGCGATCCGGAGAAAATCTTTCAATTAGATGATTCTCAAGGGCCGG‑AAAAAATAAAATTATTTTCAATGCTAAATCATGAAAAAGGTCTATACTATTTGACCCGTGATTTGCa < 1:823031/140‑1 (MQ=255) gCACACGTCGCGGTCATTAGCATGGACAGCGATCCGGAGAAAATCTTTCAATTAGATGATTCTCAAGGGCCGG‑AAAAAATAAAATTATTTTCAATGCTAAATCATGAAAAAGGTCTATACTATTTGACCCGTGATTTGCa < 2:504133/140‑1 (MQ=255) gCACACGTCGCGGTCATTAGCATGGACAGCGATCCGGAGAAAATCTTTCAATTAGATGATTCTCAAGGGCCGG‑AAAAAATAAAATTATTTTCAATGCTAAATCATGAAAAAGGTCTATACTATTTGACCCGTGATTTGCa < 1:2865829/140‑1 (MQ=255) gCACACGTCGCGGTCATTAGCATGGACAGCGATCCGGAGAAAATCTTTCAATTAGATGATTCTCAAGGGCCGG‑AAAAAATAAAATTATTTTCAATGCTAAATCATGAAAAAGGTCTATACTATTTGACCCGTGATTTGCa < 1:2722304/140‑1 (MQ=255) gCACACGTCGCGGTCATTAGCATGGACAGCGATCCGGAGAAAATCTTTCAATTAGATGATTCTCAAGGGCCGG‑AAAAAATAAAATTATTTTCAATGCTAAATCATGAAAAAGGTCTATACTATTTGACCCGTGATTTGCa < 1:2501177/140‑1 (MQ=255) cacGTCGCGGTCATTAGCATGGACAGCGATCCGGAGAAAATCTTTCAATTAGATGATTCTCAAGGGCCGG‑AAAAAATAAAATTATTTTCAATGCTAAATCATGAAAAAGGTCTATACTATTTGACCCGTGATTTGCAgtg < 2:1664061/140‑1 (MQ=255) cGTCGCGGTCATTAGCATGGACAGCGATCCGGAGAAAATCTTTCAATTAGATGATTCTCAAGGGCCGG‑AAAAAATAAAATTATTTTCAATGCTAAATCATGAAAAAGGTCTATACTATTTGACCCGTGATTTGCAgtg < 2:150213/138‑1 (MQ=255) cGTCGCGGTCATTAGCATGGACAGCGATCCGGAGAAAATCTTTCAATTAGATGATTCTCAAGGGCCGG‑AAAAAATAAAATTATTTTCAATGCTAAATCATGAAAAAGGTCTATACTATTTGACCCGTGATTTGCAgtg > 1:150213/1‑138 (MQ=255) cGTCGCGGTCATTAGCATGGACAGCGATCCGGAGAAAATCTTTCAATTAGATGATTCTCAAGGGCCGG‑AAAAAATAAAATTATTTTCAATGCTAAATCATGAAAAAGGTCTATACTATTTGACCCGTGATTTGCAGTGtt > 2:2637011/1‑140 (MQ=255) tCGCGGTCATTAGCATGGACAGCGATCCGGAGAAAATCTTTCAATTAGATGATTCTCAAGGGCCGG‑AAAAAATAAAATTATTTTCAATGCTAAATCATGAAAAAGGTCTATACTATTTGACCCGTGATTTGCa > 1:1263525/1‑133 (MQ=255) cgGTCATTAGCATGGACAGCGATCCGGAGAAAATCTTTCAATTAGATGATTCTCAAGGGCCGG‑AAAAAATAAAATTATTTTCAATGCTAAATCATGAAAAAGGTCTATACTATTTGACCCGTGATTTGCAGTGTTCTAtt < 1:2192627/140‑1 (MQ=255) ggTCATTAGCATGGACAGCGATCCGGAGAAAATCTTTCAATTAGATGATTCTCAAGGGCCGG‑AAAAAATAAAATTATTTTCAATGCTAAATCATGAAAAAGGTCTATACTATTTGACCCGTGATTTGCAGTGTTCTATTg < 2:947895/140‑1 (MQ=255) ggTCATTAGCATGGACAGCGATCCGGAGAAAATCTTTCAATTAGATGATTCTCAAGGGCCGG‑AAAAAATAAAATTATTTTCAATGCTAAATCATGAAAAAGGTCTATACTATTTGACCCGTGATTTGCAGTGTTCTATTg < 1:1205758/140‑1 (MQ=255) aTTAGCATGGACAGCGATCCGGAGAAAATCTTTCAATTAGATGATTCTCAAGGGCCGG‑AAAAAATAAAATTATTTTCAATGCTAAATCATGAAAAAGGTCTATACTATTTGACCCGTGATTTGCAGTGTTCTATTGATcc < 2:2091187/140‑1 (MQ=255) aTTAGCATGGACAGCGATCCGGAGAAAATCTTTCAATTAGATGATTCTCAAGGGCCGG‑AAAAAATAAAATTATTTTCAATGCTAAATCATGAAAAAGGTCTATACTATTTGACCCGTGATTTGCAGTGTTCTATTGATcc < 2:614681/140‑1 (MQ=255) aTTAGCATGGACAGCGATCCGGAGAAAATCTTTCAATTAGATGATTCTCAAGGGCCGG‑AAAAAATAAAATTATTTTCAATGCTAAATCATGAAAAAGGTCTATACTATTTGACCCGTGATTTGCAGTGTTCTATTGATcc < 1:2349378/140‑1 (MQ=255) aGCATGGACAGCGATCCGGAGAAAATCTTTCAATTAGATGATTCTCAAGGGCCGGAAAAAAATAAAATTATTTTCAATGCTAAATCATGAAAAAGGTCTATACTATTTGACCCGTGATTTGCAGTGTTCTATTGATcccc > 2:1006437/1‑140 (MQ=255) ggACAGCGATCCGGAGAAAATCTTTCAATTAGATGATTCTCAAGGGCCGG‑AAAAAATAAAATTATTTTCAATGCTAAATCATGAAAAAGGTCTATACTATTTGACCCGTGATTTGCAGTGTTCTATTGATCCCCATAAtt > 1:1061653/1‑140 (MQ=255) gACAGCGATCCGGAGAAAATCTTTCAATTAGATGATTCTCAAGGGCCGG‑AAAAAATAAAATTATTTTCAATGCTAAATCATGAAAAAGGTCTATACTATTTGACCCGTGATTTGCAGTGTTCTATTGATCCCCATAATTa < 1:384748/140‑1 (MQ=255) gACAGCGATCCGGAGAAAATCTTTCAATTAGATGATTCTCAAGGGCCGG‑AAAAAATAAAATTATTTTCAATGCTAAATCATGAAAAAGGTCTATACTATTTGACCCGTGATTTGCAGTGTTCTATTGATCCCCATAATTa < 1:2979294/140‑1 (MQ=255) aCAGCGATCCGGAGAAAATCTTTCAATTAGATGATTCTCAAGGGCCGG‑AAAAAATAAAATTATTTTCAATGCTAAATCATGAAAAAGGGCTATACTATTTGACCCGCGATTTGCAGTGTTCTATTGATCCCCATAATTAc > 1:213573/1‑140 (MQ=255) aGCGATCCGGAGAAAATCTTTCAATTAGATGATTCTCAAGGGCCGG‑AAAAAATAAAATTATTTTCAATGCTAAATCATGAAAAAGGTCTATACTATTTGACCCGTGATTTGCAGTGTTCTATTGATCCCCATAATTACCt > 1:607262/1‑140 (MQ=255) cGATCCGGAGAAAATCTTTCAATTAGATGATTCTCAAGGGCCGG‑AAAAAATAAAATTATTTTCAATGCTAAATCATGAAAAAGGTCTATACTATTTGACCCGTGATTTGCAGTGTTCTATTGATCCCCATAATTACCttt > 2:1176467/1‑140 (MQ=255) cGATCCGGAGAAAATCTTTCAATTAGATGATTCTCAAGGGCCGG‑AAAAAATAAAATTATTTTCAATGCTAAATCATGAAAAAGGTCTATACTATTTGACCCGTGATTTGCAGTGTTCTATTGATCCCCATAATTACCttt < 2:492487/140‑1 (MQ=255) cGGAGAAAATCTTTCAATTAGATGATTCTCAAGGGCCGG‑AAAAAATAAAATTATTTTCAATGCTAAATCATGAAAAAGGTCTATACTATTTGACCCGTGATTTGCAGTGTTCTATTGATCCCCATAATTACCTTTTTAtt > 2:1341901/1‑140 (MQ=255) | CGACATATGCCAGCAGGCGGCGTCTGGTGGTTTAACGTCGATCGCCATGAAGATGCTATCAGTCTGGCGAATCAAACAATTGCATCCCAGGCTGAAACCGCACACGTCGCGGTCATTAGCATGGACAGCGATCCGGCGAAAATCTTTCAATTAGATGATTCTCAAGGGCCGG‑AAAAAATAAAATTATTTTCAATGCTAAATCATGAAAAAGGTCTATACTATTTGACCCGTGATTTGCAGTGTTCTATTGATCCCCATAATTACCTTTTTATT > NC_000913/3696518‑3696790 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |