Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 772,783 C→A F442L (TTC→TTA)  cydA → cytochrome bd‑I ubiquinol oxidase subunit I

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913772,7830CA100.0% 411.5 / NA 114F442L (TTC→TTA) cydAcytochrome bd‑I ubiquinol oxidase subunit I
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base A (48/66);  total (48/66)

Only 100 of 115 total aligned reads displayed.

CTTCCTGCTTCTGGCAATCATCGCGCTCTCTTTCTGGAGTGTCATCCGCAACCGCATTGGCGAGAAAAAATGGCTTCTGCGCGCCGCGCTGTACGGTATTCCGCTGCCGTGGATTGCTGTAGAAGCGGGCTGGTTCGTGGCTGAATATGGCCGCCAACCGTGGGCTATCGGTGAAGTGCTGCCGACAGCTGTGGCGAACTCGTCACTGACCGCAGGCGATCTCATCTTCTCAATGGTGCTGATTTGCGGCCTGTATACCCTGTTCCTGGT  >  NC_000913/772648‑772917
                                                                                                                                       |                                                                                                                                      
cTTCCTGCTTCTGGCAATCGTCGCGCTCTCTTTCTGGAGTGTCATCCGCAACCGCATTGGCGAGAAAAAATGGCTTCTGCGCGCCGCGCTGTACGGTATTCCGCTGCCGTGGATTGCTGTAGAAGCGGGCTGGTTAGTgg                                                                                                                                    <  1:2024427/140‑1 (MQ=255)
cTTCCTGCTTCTGGCAATCATCGCGCTCTCTTTCTGGAGTGTCATCCGCAACCGCATTGGCGAGAAAAAATGGCTTCTGCGCGCCGCGCTGTACGGTATTCCGCTGCCGTGGATTGCTGTAGAAGCGGGCTGGTTAGTgg                                                                                                                                    <  1:2262647/140‑1 (MQ=255)
cTTCCTGCTTCTGGCAATCATCGCGCTCTCTTTCTGGAGTGTCATCCGCAACCGCATTGGCGAGAAAAAATGGCTTCTGCGCGCCGCGCTGTACGGTATTCCGCTGCCGTGGATTGCTGTAGAAGCGGGCTGGTTAGTgg                                                                                                                                    <  1:2876116/140‑1 (MQ=255)
cTTCCTGCTTCTGGCAATCATCGCGCTCTCTTTCTGGAGTGTCATCCGCAACCGCATTGGCGAGAAAAAATGGCTTCTGCGCGCCGCGCTGTACGGTATTCCGCTGCCGTGGATTGCTGTAGAAGCGGGCTGGTTAGTgg                                                                                                                                    >  1:678667/1‑140 (MQ=255)
  tCCTGCTTCTGGCAATCATCGCGCTCTCTTTCTGGAGTGTCATCCGCAACCGCATTGGCGAGAAAAAATGGCTTCTGCGCGCCGCGCTGTACGGTATTCCGCTGCCGTGGATTGCTGTAGAAGCGGGCTGGTTAGTGGCt                                                                                                                                  >  2:2281393/1‑140 (MQ=255)
       cTTCTGGCAATCATCGCGCTCTCTTTCTGGAGTGTCATCCGCAACCGCATTGGCGAGAAAAAATGGCTTCTGCGCGCCGCGCTGTACGGTATTCCGCTGCCGTGGATTGCTGTAGAAGCGGGCTGGTTAGTGGCTGAata                                                                                                                             >  2:2372699/1‑140 (MQ=255)
       cTTCTGGCAATCATCGCGCTCTCTTTCTGGAGTGTCATCCGCAACCACATTGGCGAGAAAAAATGGCTTCTGCGCGCCGCGCTGTACGGTATTCCGCTGCCGTGGATTGCTGTAGAAGCGGGCTGGTTAGTGGCTGAata                                                                                                                             <  2:2991686/140‑1 (MQ=255)
         tCTGGCAATCATCGCGCTCTCTTTCTGGAGTGTCATCCGCAACCGCATTGGCGAGAAAAAATGGCTTCTGCGCGCCGCGCTGTACGGTATTCCGCTGCCGTGGATTGCTGTAGAAGCGGGCTGGTTAGTGGCTGAATATg                                                                                                                           <  1:1831981/140‑1 (MQ=255)
          cTGGCAATCATCGCGCTCTCTTTCTGGAGTGTCATCCGCAACCACATTGGCGAGAAAAAATGGCTTCTGCGCGCCGCGCTGTACGGTATTCCGCTGCCGTGGATTGCTGTAGAAGCGGGCTGGTTAGTGGCTGAATATgg                                                                                                                          >  2:2372508/1‑140 (MQ=255)
           tGGCAATCATCGCGCTCTCTTTCTGGAGTGTCATCCGCAACCGCATTGGCGAGAAAAAATGGCTTCTGCGCGCCGCGCTGTACGGTATTCCGCTGCCGTGGATTGCTGTAGAAGCGGGTTGGTTAGTGGCTGAATATGgc                                                                                                                         <  1:2137411/140‑1 (MQ=255)
            ggCAATCATCGCGCTCTCTTTCTGGAGTGTCATCCGCAACCGCATTGGCGAGAAAAAATGGCTTCTGCGCGCCGCGCTGTACGGTATTCCGC‑GCCGTGGATTGCTGTAGAAGCGGGCTGGTTAGTGGCTGAATATGgccg                                                                                                                       >  1:2826948/1‑140 (MQ=255)
             gCAATCATCGCGCTCTCTTTCTGGAGTGTCATCCGCAACCGCATGGGCGAGAAAAAATGGCTTCTGCGCGCCGCGCTGTAAGGTATTCCGCTGCCGTGGTTTGCTGTAGAAGCGGGCTGGGTAGTGGCTGAATATGgccc                                                                                                                       >  2:2830620/1‑139 (MQ=255)
              cAATCATCGCGCTCTCTTTCTGGAGTGTCATCCGCAACCGCATTGGCGAGAAAAAATGGCTTCTGCGCGCCGCGCTGTACGGTATTCCGCTGCCGTGGATTGCTGTAGAAGCGGGCTGGTTAGTGGCTGAATATGgccgc                                                                                                                      <  1:1218628/140‑1 (MQ=255)
                    tcGCGCTCTCTTTCTGGAGTGTCATCCGCAACCGCATTGGCGAGAAAAAATGGCTTCTGCGCGCCGCGCTGTACGGTATTCCGCTGCCGTGGATTGCTGTAGAAGCGGGCTGGTTAGTGGCTGAATATGGCCGCCAACCg                                                                                                                <  1:1606799/140‑1 (MQ=255)
                     cgcgCTCTCTTTCTGGAGTGTCATCCGCAACCGCATTGGCGAGAAAAAATGGCTTCTGCGCGCCGCGCTGTACGGTATTCCGCTGCCGTGGATTGCTGTAGAAGCGGGCTGGTTAGTGGCTGAATATGGCCGCCAACCGt                                                                                                               <  1:2318626/140‑1 (MQ=255)
                       cgcTCTCTTTCTGGAGTGTCATCCGCAACCGCATTGGCGAGAAAAAATGGCTTCTGCGCGCCGCGCTGTACGGTATTCCGCTGCCGTGGATTGCTGTAGAAGCGGGCTGGTTAGTGGCTGAATATGGCCGCCAACCGTgg                                                                                                             >  1:1273452/1‑140 (MQ=255)
                            tctTTCTGGAGTGTCATCCGCAACCGCATTGGCGAGAAAAAATGGCTTCTGCGCGCCGCGCTGTACGGTATTCCGCTGCCGTGGATTGCTGTAGAAGCGGGC‑‑‑TTAGTGGCTGAATATGGCCGCCAACCGTGGGCTATCgg                                                                                                     >  1:1557626/1‑140 (MQ=255)
                                  tGGAGTGTCATCCGCAACCGCATTGGCGAGAAAAAATGGCTTCTGCGCGCCGCGCTGTACGGTATTCCGCTGCCGTGGATTGCTGTAGAAGCGGGCTGGTTAGTGGCTGAATATGGCCGCCAACCGTGGGCTATCGGTGa                                                                                                  <  1:1374325/140‑1 (MQ=255)
                                      gtgtCATCCGCAACCGCATTGGCGAGAAAAAATGGCTTCTGCGCGCCGCGCTGTACGGTATTCCGCTGCCGTGGATTGCTGTAGAAGCGGGCTGGTTAGTGGCTGAATATGGCCGCCAACCGTGGGCTATCGGTGAAGtg                                                                                              >  2:1816562/1‑140 (MQ=255)
                                      gtgtCATCCGCAACCGCATTGGCGAGAAAAAATGGCTTCTGCGCGCCGCGCTGTACGGTATTCCGCTGCCGTGGATTGCTGTAGAAGCGGGCTGGTTAGTGGCTGAATATGGCCGCCAACCGTGGGCTATCGGTGAAGtg                                                                                              >  2:213/1‑140 (MQ=255)
                                      gtgtCATCCGCAACCGCATTGGCGAGAAAAAATGGCTTCTGCGCGCCGCGCTGTACGGTATTCCGCTGCCGTGGATTGCTGTAGAAGCGGGCTGGTTAGTGGCTGAATATGGCCGCCAACCGTGGGCTATCGGTGAAGtg                                                                                              <  1:2707551/140‑1 (MQ=255)
                                      gtgtCATCCGCAACCGCATTGGCGAGAAAAAATGGCTTCTGCGCGCCGCGCTGTACGGTATTCCGCTGCCGTGGATTGCTGTAGAAGCGGGCTGGTTAGTGGCTGAATATGGCCGCCAACCGTGGGCTATCGGTGAAGtg                                                                                              >  1:2582767/1‑140 (MQ=255)
                                        gtCATCCGCAACCGCATTGGCGAGAAAAAATGGCTTCTGCGCGCCGCGCTGTACGGTATTCCGCTGCCGTGGATTGCTGTAGAAGCGGGCTGGTTAGTGGCTGAATATGGCCGCCAACCGTGGGCTATCGGTGAAGtgct                                                                                            >  1:624106/1‑140 (MQ=255)
                                        gtCATCCGCAACCGCATTGGCGAGAAAAAATGGCTTCTGCGCGCCGCGCTGTACGGTATTCCGCTGCCGTGGATTGCTGTAGAAGCGGGCTGGTTAGTGGCTGAATATGGCCGCCAACCGTGGGCTATCGGTGAAGtgct                                                                                            >  2:917212/1‑140 (MQ=255)
                                         tCATCCGCAACCGCATTGGCGAGAAAAAATGGCTTCTGCGCGCCGCGCTGTACGGTATTCCGCTGCCGTGGATTGCTGTAGAAGCGGGCTGGTTAGTGGCTGAATATGGCCGCCAACCGTGGGCTATCGGTGAAGtgctg                                                                                           >  1:679896/1‑140 (MQ=255)
                                            tCCGCAACCGCATTGGCGAGAAAAAATGGCTTCTGCGCGCCGCGCTGTACGGTATTCCGCTGCCGTGGATTGCTGTAGAAGCGGGCTGGTTAGTGGCTGAATATGGCCGCCAACCGTGGGCTATCGGTGAAGTGCTGCCg                                                                                        >  2:897527/1‑140 (MQ=255)
                                              cGCAACCGCATTGGCGAGAAAAAATGGCTTCTGCGCGCCGCGCTGTACGGTATTCCGCTGCCGTGGATTGCTGTAGAAGCGGGCTGGTTAGTGGCTGAATATGGCCGCCAACCGTGGGCTATCGGTGAAGTGCTGCCGAc                                                                                      >  2:2140313/1‑140 (MQ=255)
                                              cGCAACCGCATTGGCGAGAAAAAATGGCTTCTGCGCGCCGCGCTGTACGGTATTCCGCTGCCGTGGATTGCTGTAGAAGCGGGCTGGTTAGTGGCTGAATATGGCCGCCAACCGTGGGCTATCGGTGAAGTGCTGCCGAc                                                                                      >  2:3023423/1‑140 (MQ=255)
                                                 aaCCGCATTGGCGAGAAAAAATGGCTTCTGCGCGCCGCGCTGTACGGTATTCCGCTGCCGTGGATTGCTGTAGAAGCGGGCTGGTTAGTGGCTGAATATGGCCGCCAACCGTGGGCTATCGGTGAAGTGCTGCCGACAGc                                                                                   >  1:1539072/1‑140 (MQ=255)
                                                   ccGCATTGGCGAGAAAAAATGGCTTCTGCGCGCCGCGCTGTACGGTATTCCGCTGCCGTGGATTGCTGTAGAAGCGGGCTGGTTAGTGGCTGAATATGGCCGCCAACCGTGGGCTATCGGTGAAGTGCTGCCGACAGCtg                                                                                 >  2:2528701/1‑140 (MQ=255)
                                                     gCATTGGCGAGAAAAAATGGCTTCTGCGCGCCGCGCTGTACGGTATTCCGCTGCCGTGGATTGCTGTAGAAGCGGGCTGGTTAGTGGCTGAATATGGCCGCCAACCGTGGGCTATCGGTGAAGTGCTGCCGACAGCtgtg                                                                               <  1:2140346/140‑1 (MQ=255)
                                                        ttGGCGAGAAAAAATGGCTTCTGCGCGCCGCGCTGTACGGTATTCCGCTGCCGTGGATTGCTGTAGAAGCGGGCTGGTTAGTGGCTGAATATGGCCGCCAACCGTGGGCTATCGGTGAAGTGCTGCCGACAGCTGTGGCg                                                                            <  1:281235/140‑1 (MQ=255)
                                                           gCGAGAAAAAATGGCTTCTGCGCGCCGCGCTGTACGGTATTCCGCTGCCGTGGATTGCTGTAGAAGCGGGCTGGTTAGTGGCTGAATATGGCCGCCAACCGTGGGCTATCGGTGAAGTGCTGCCGACAGCTGTGGCGAAc                                                                         <  1:269403/140‑1 (MQ=255)
                                                           gCGAGAAAAAATGGCTTCTGCGCGCCGCGCTGTACGGTATTCCGCTGCCGTGGATTGCTGTAGAAGCGGGCTGGTTAGTGGCTGAATATGGCCGCCAACCGTGGGCTATCGGTGAAGTGCTGCCGACAGCTGTGGCGAAc                                                                         >  2:104245/1‑140 (MQ=255)
                                                           gCGAGAAAAAATGGCTTCTGCGCGCCGCGCTGTACGGTATTCCGCTGCCGTGGATTGCTGTAGAAGCGGGCTGGTTAGTGGCTGAATATGGCCGCCAACCGTGGGCTATCGGTGAAGTGCTGCCGACAGCTGTGGCGAAc                                                                         <  1:148033/140‑1 (MQ=255)
                                                             gagaAAAAATGGCTTCTGCGCGCCGCGCTGTACGGTATTCCGCTGCCGTGGATTGCTGTAGAAGCGGGCTGGTTAGTGGCTGAATATGGCCGCCAACCGTGGGCTATCGGTGAAGTGCTGCCGACAGCTGTGGCGAACTc                                                                       <  1:2372699/140‑1 (MQ=255)
                                                                aaaaaaTGGCTTCTGCGCGCCGCGCTGTACGGTATTCCGCTGCCGTGGATTGCTGTAGAAGCGGGCTGGTTAGTGGCTGAATATGGCCGCCAACCGTGGGCTATCGGTGAAGTGCTGCCGACAg                                                                                    <  1:797423/124‑1 (MQ=255)
                                                                aaaaaaTGGCTTCTGCGCGCCGCGCTGTACGGTATTCCGCTGCCGTGGATTGCTGTAGAAGCGGGCTGGTTAGTGGCTGAATATGGCCGCCAACCGTGGGCTATCGGTGAAGTGCTGCCGACAg                                                                                    >  2:797423/1‑124 (MQ=255)
                                                                        gCTTCTGCGCGCCGCGCTGTACGGTATTCCGCTGCCGTGGATTGCTGTAGAAGCGGGCTGGTTAGTGGCTGAATATGGCCGCCAACCGTGGGCTATCGGTGAAGTGCTGCCGACAGCTGTGGCGAACTCGTCACTGACCg                                                            <  2:1373880/140‑1 (MQ=255)
                                                                         cTTCTGCGCGCCGCGCTGTACGGTATTCCGCTGCCGTGGATTGCTGTAGAAGCGGGCTGGTTAGTGGCTGAATATGGCCGCCAACCGTGGGCTATCGGTGAAGTGCTGCCGACAGCTGTGGCGAACTCGTCACTGACCGc                                                           <  1:980885/140‑1 (MQ=255)
                                                                            cTGCGCGCCGCGCTGTACGGTATTCCGCTGCCGTGGATTGCTGTAGAAGCGGGCTGGTTAGTGGCTGAATATGGCCGCCAACCGTGGGCTATCGGTGAAGTGCTGCCGACAGCTGTGGCGAACTCGTCACTGACCGCAgg                                                        <  2:2777453/140‑1 (MQ=255)
                                                                              gcgcgcCGCGCTGTACGGTATTCCGCTGCCGTGGATTGCTGTAGAAGCGGGCTGGTTAGTGGCTGAATATGGCCGCCAACCGTGGGCTATCGGTGAAGTGCTGCCGACAGCTGTGGCGAACTCGTCACTGACCGCAGGCg                                                      <  1:2372508/140‑1 (MQ=255)
                                                                              gcgcgcCGCGCTGTACGGTATTCCGCTGCCGTGGATTGCTGTAGAAGCGGGCTGGTTAGTGGCTGAATATGGCCGCCAACCGTGGGCTATCGGTGAAGTGCTGCCGACAGCTGTGGCGAACTCGTCACTGACCGCAGGCg                                                      <  2:821836/140‑1 (MQ=255)
                                                                                   ccgcgcTGTACGGTATTCCGCTGCCGTGGATTGCTGTAGAAGCGGGCTGGTTAGTGGCTGAATATGGCCGCCAACCGTGGGCTATCGGTGAAGTGCTGCCGACAGCTGTGGCGAACTCGTCACTGACCGCAGGCGAtctc                                                 <  1:1816562/140‑1 (MQ=255)
                                                                                   ccgcgcTGTACGGTATTCCGCTGCCGTGGATTGCTGTAGAAGCGGGCTGGTTAGTGGCTGAATATGGCCGCCAACCGTGGGCTATCGGTGAAGTGCTGCCGACAGCTGTGGCGAACTCGTCACTGACCGCAGGCGAtctc                                                 <  1:2830620/140‑1 (MQ=255)
                                                                                   ccgcgcTGTACGGTATTCCGCTGCCGTGGATTGCTGTAGAAGCGGGCTGGTTAGTGGCTGAATATGGCCGCCAACCGTGGGCTATCGGTGAAGTGCTGCCGACAGCTGTGGCGAACTCGTCACTGACCGCAGGCGAtctc                                                 <  2:678667/140‑1 (MQ=255)
                                                                                   ccgcgcTGTACGGTATTCCGCTGCCGTGGATTGCTGTAGAAGCGGGCTGGTTAGTGGCTGAATATGGCCGCCAACCGTGGGCTATCGGTGAAGTGCTGCCGACAGCTGTGGCGAACTCGTCACTGACCGCAGGCGAtctc                                                 <  1:2528701/140‑1 (MQ=255)
                                                                                   ccgcgcTGTACGGTATTCCGCTGCCGTGGATTGCTGTAGAAGCGGGCTGGTTAGTGGCTGAATATGGCCGCCAACCGTGGGCTATCGGTGAAGTGCTGCCGACAGCTGTGGCGAACTCGTCACTGACCGCAGGCGAtctc                                                 <  1:2413281/140‑1 (MQ=255)
                                                                                     gcgcTGTACGGTATTCCGCTGCCGTGGATTGCTGTAGAAGCGGGCTGGTTAGTGGCTGAATATGGCCGCCAACCGTGGGCTATCGGTGAAGTGCTGCCGACAGCTGTGGCGAACTCGTCACTGACCGCAGGCGATCTCAt                                               <  1:1417755/140‑1 (MQ=255)
                                                                                     gcgcTGTACGGTATTCCGCTGCCGTGGATTGCTGTAGAAGCGGGCTGGTTAGTGGCTGAATATGGCCGCCAACCGTGGGCTATCGGTGAAGTGCTGCCGACAGCTGTGGCGAACTCGTCACTGACCGCAGGCGATCTCAt                                               <  2:1273452/140‑1 (MQ=255)
                                                                                     gcgcTGTACGGTATTCCGCTGCCGTGGATTGCTGTAGAAGCGGGCTGGTTAGTGGCTGAATATGGCCGCCAACCGTGGGCTATCGGTGAAGTGCTGCCGACAGCTGTGGCGAACTCGTCACTGACCGCAGGCGATCTCAt                                               <  1:2264769/140‑1 (MQ=255)
                                                                                        cTGTACGGTATTCCGCTGCCGTGGATTGCTGTAGAAGCGGGCTGGTTAGTGGCTGAATATGGCCGCCAACCGTGGGCTATCGGTGAAGTGCTGCCGACAGCTGTGGCGAACTCGTCACTGACCGCAGGCGATCTCAtctt                                            <  1:2140313/140‑1 (MQ=255)
                                                                                             cGGTATTCCGCTGCCGTGGATTGCTGTAGAAGCGGGCTGGTTAGTGGCTGAATATGGCCGCCAACCGTGGGCTATCGGTGAAGTGCTGCCGACAGTTGTGGCGAACTCGTCACTGACCGCAGGCGATCTCATCTTCTCaa                                       <  1:2281393/140‑1 (MQ=255)
                                                                                             cGGTATTCCGCTGCCGTGGATTGCTGTAGAAGCGGGCTGGTTAGTGGCTGAATATGGCCGCCAACCGTGGGCTATCGGTGAAGTGCTGCCGACAGCTGTGGCGAACTCGTCACTGACCGCAGGCGATCTCATCTTCTCaa                                       <  2:679896/140‑1 (MQ=255)
                                                                                             cGGTATTCCGCTGCCGTGGATTGCTGTAGAAGCGGGCTGGTTAGTGGCTGAATATGGCCGCCAACCGTGGGCTATCGGTGAAGTGCTGCCGACAGCTGTGGCGAACTCGTCACTGACCGCAGGCGATCTCATCTTCTCaa                                       <  1:213/140‑1 (MQ=255)
                                                                                                   tCCGCTGCCGTGGATTGCTGTAGAAGCGGGCTGGTTAGTGGCTGAATATGGCCGCCAACCGTGGGCTATCGGTGAAGTGCTGCCGACAGCTGTGGCGAACTCGTCACTGACCGCAGGCGATCTCATCTTCTCAATGGTGc                                 >  2:2637148/1‑140 (MQ=255)
                                                                                                     cGCTGCCGTGGATTGCTGTAGAAGCGGGCTGGTTAGTGGCTGAATATGGCCGCCAACCGTGGGCTATCGGTGAAGTGCTGCCGACAGCTGTGGCGAACTCGTCACTGACCGCAGGCGATCTCATCTTCTCAATGGTGCTg                               >  2:1941153/1‑140 (MQ=255)
                                                                                                     cGCTGCCGTGGATTGCTGTAGAAGCGGGCTGGTTAGTGGCTGAATATGGCCGCCAACCGTGGGCTATCGGTGAAGTGCTGCCGACAGCTGTGGCGAACTCGTCACTGACCGCAGGCGATCTCATCTTCTCAATGGTGCTg                               >  2:445409/1‑140 (MQ=255)
                                                                                                     cGCTGCCGTGGATTGCTGTAGAAGCGGGCTGGTTAGTGGCTGAATATGGCCGCCAACCGTGGGCTATCGGTGAAGTGCTGCCGACAGCTGTGGCGAACTCGTCACTGACCGCAGGCGATCTCATCTTCTCAATGGTGCTg                               >  2:388812/1‑140 (MQ=255)
                                                                                                     cGCTGCCGTGGATTGCTGTAGAAGCGGGCTGGTTAGTGGCTGAATATGGCCGCCAACCGTGGGCTATCGGTGAAGTGCTGCCGACAGCTGTGGCGAACTCGTCACTGACCGCAGGCGATCTCATCTTCTCAATGGTGCTg                               >  2:1558259/1‑140 (MQ=255)
                                                                                                     cGCTGCCGTGGATTGCTGTAGAAGCGGGCTGGTTAGTGGCTGAATATGGCCGCCAACCGTGGGCTATCGGTGAAGTGCTGCCGACAGCTGTGGCGAACTCGTCACTGACCGCAGGCGATCTCATCTTCTCAATGGTGCTg                               >  2:2869421/1‑140 (MQ=255)
                                                                                                     cGCTGCCGTGGATTGCTGTAGAAGCGGGCTGGTTAGTGGCTGAATATGGCCGCCAACCGTGGGCTATCGGTGAAGTGCTGCCGACAGCTGTGGCGAACTCGTCACTGACCGCAGGCGATCTCATCTTCTCAATGGTGCTg                               >  2:1552100/1‑140 (MQ=255)
                                                                                                     cGCTGCCGTGGATTGCTGTAGAAGCGGGCTGGTTAGTGGCTGAATATGGCCGCCAACCGTGGGCTATCGGTGAAGTGCTGCCGACAGCTGTGGCGAACTCGTCACTGACCGCAGGCGATCTCATCTTCTCAATGGTGCTg                               >  2:1344326/1‑140 (MQ=255)
                                                                                                     cGCTGCCGTGGATTGCTGTAGAAGCGGGCTGGTTAGTGGCTGAATATGGCCGCCAACCGTGGGCTATCGGTGAAGTGCTGCCGACAGCTGTGGCGAACTCGTCACTGACCGCAGGCGATCTCATCTTCTCAATGGTGCTg                               >  2:1415101/1‑140 (MQ=255)
                                                                                                       cTGCCGTGGATTGCTGTAGAAGCGGGCTGGTTAGTGGCTGAATATGGCCGCCAACCGTGGGCTATCGGTGAAGTGCTGCCGACAGCTGTGGCGAACTCGTCACTGACCGCAGGCGATCTCATCTTCTCAATGGTGCTGAt                             >  2:1258385/1‑140 (MQ=255)
                                                                                                        tGCCGTGGATTGCTGTAGAAGCGGGCTGGTTAGTGGCTGAATATGGCCGCCAACCGTGGGCTATCGGTGAAGTGCTGCCGACAGCTGTGGCGAACTCGTCACTGACCGCAGGCGATCTCATCTTCTCAATGGTGCTGAtt                            >  2:2049452/1‑140 (MQ=255)
                                                                                                         gCCGTGGATTGCTGTAGAAGCGGGCTGGTTAGTGGCTGAATATGGCCGCCAACCGTGGGCTATCGGTGAAGTGCTGCCGACAGCTGTGGCGAACTCGTCACTGACCGCAGGCGATCTCATCTTCTCAATGGTGCTGAttt                           <  1:445409/140‑1 (MQ=255)
                                                                                                          ccGTGGATTGCTGTAGAAGCGGGCTGGTTAGTGGCTGAATATGGCCGCCAACCGTGGGCTATCGGTGAAGTGCTGCCGACAGCTGTGGCGAACTCGTCACTGACCGCAGGCGATCTCATCTTCTCAATGGTGCTGATTTg                          >  2:2801555/1‑140 (MQ=255)
                                                                                                          ccGTGGATTGCTGTAGAAGCGGGCTGGTTAGTGGCTGAATATGGCCGCCAACCGTGGGCTATCGGTGAAGTGCTGCCGACAGCTGTGGCGAACTCGTCACTGACCGCAGGCGATCTCATCTTCTCAATGGTGCTGATTTg                          >  2:2499219/1‑140 (MQ=255)
                                                                                                          ccGTGGATTGCTGTAGAAGCGGGC‑‑‑TTAGTGGCTGAATATGGCCGCCAACCGTGGGCTATCGGTGAAGTGCTGCCGACAGCTGTGGCGAACTCGTCACTGACCGCAGGCGATCTCATCTTCTCAATGGTGCTGATTTGCgg                       <  2:1557626/140‑1 (MQ=255)
                                                                                                           cGTGGATTGCTGTAGAAGCGGGCTGGTTAGTGGCTGAATATGGCCGCCAACCGTGGGCTATCGGTGAAGTGCTGCCGACAGCTGTGGCGAACTCGTCACTGACCGCAGGCGATCTCATCTTCTCAATGGTGCTGATTTGc                         <  2:2582767/140‑1 (MQ=255)
                                                                                                           cGTGGATTGCTGTAGAAGCGGGCTGGTTAGTGGCTGAATATGGCCGCCAACCGTGGGCTATCGGTGAAGTGCTGCCGACAGCTGTGGCGAACTCGTCACTGACCGCAGGCGATCTCATCTTCTCAATGGTGCTGATTTGc                         <  1:2443174/140‑1 (MQ=255)
                                                                                                           cGTGGATTGCTGTAGAAGCGGGCTGGTTAGTGGCTGAATATGGCCGCCAACCGTGGGCTATCGGTGAAGTGCTGCCGACAGCTGTGGCGAACTCGTCACTGACCGCAGGCGATCTCATCTTCTCAATGGTGCTGATTTGc                         <  1:200339/140‑1 (MQ=255)
                                                                                                           cGTGGATTGCTGTAGAAGCGGGCTGGTTAGTGGCTGAATATGGCCGCCAACCGTGGGCTATCGGTGAAGTGCTGCCGACAGCTGTGGCGAACTCGTCACTGACCGCAGGCGATCTCATCTTCTCAATGGTGCTGATTTGc                         <  1:1344326/140‑1 (MQ=255)
                                                                                                           cGTGGATTGCTGTAGAAGCGGGCTGGTTAGTGGCTGAATATGGCCGCCAACCGTGGGCTATCGGTGAAGTGCTGCCGACAGCTGTGGCGAACTCGTCACTGACCGCAGGCGATCTCATCTTCTCAATGGTGCTGATTTGc                         <  1:2869421/140‑1 (MQ=255)
                                                                                                           cGTGGATTGCTGTAGAAGCGGGCTGGTTAGTGGCTGAATATGGCCGCCAACCGTGGGCTATCGGTGAAGTGCTGCCGACAGCTGTGGCGAACTCGTCACTGACCGCAGGCGATCTCATCTTCTCAATGGTGCTGATTTGc                         <  1:44301/140‑1 (MQ=255)
                                                                                                            gTGGATTGCTGTAGAAGCGGGCTGGTTAGTGGCTGAATATGGCCGCCAACCGTGGGCTATCGGTGAAGTGCTGCCGACAGCTGTGGCGAACTCGTCACTGACCGCAGGCGATTTCATCTTCTCAATGGTGCTGATTTGCg                        <  2:1714455/140‑1 (MQ=255)
                                                                                                            gTGGATTGCTGTAGAAGCGGGCTGGTTAGTGGCTGAATATGGCCGCCAACCGTGGGCTATCGGTGAAGTGCTGCCGACAGCTGTGGCGAACTCGTCACTGACCGCAGGCGATCTCATCTTCTCAATGGTGCTGATTTGCg                        >  1:428801/1‑140 (MQ=255)
                                                                                                            gTGGATTGCTGTAGAAGCGGGCTGGTTAGTGGCTGAATATGGCCGCCAACCGTGGGCTATCGGTGAAGTGCTGCCGACAGCTGTGGCGAACTCGTCACTGACCGCAGGCGATCTCATCTTCTCAATGGTGCTGATTTGCg                        <  1:3023423/140‑1 (MQ=255)
                                                                                                             tGGATTGCTGTAGAAGCGGGCTGGTTAGTGGCTGAATATGGCCGCCAACCGTGGGCTATCGGTGAAGTGCTGCCGACAGCTGTGGCGAACTCGTCACTGACCGCAGGCGATCTCATCTTCTCAATGGTGCTGATTTGCgg                       <  1:1836506/140‑1 (MQ=255)
                                                                                                             tGGATTGCTGTAGAAGCGGGCTGGTTAGTGGCTGAATATGGCCGCCAACCGTGGGCTATCGGTGAAGTGCTGCCGACAGCTGTGGCGAACTCGTCACTGACCGCAGGCGATCTCATCTTCTCAATGGTGCTGATTTGCgg                       <  1:917212/140‑1 (MQ=255)
                                                                                                             tGGATTGCTGTAGAAGCGGGCTGGTTAGTGGCTGAATATGGCCGCCAACCGTGGGCTATCGGTGAAGTGCTGCCGACAGCTGTGGCGAACTCGTCACTGACCGCAGGCGATCTCATCTTCTCAATGGTGCTGATTTGCgg                       <  1:2334630/140‑1 (MQ=255)
                                                                                                             tGGATTGCTGTAGAAGCGGGCTGGTTAGTGGCTGAATATGGCCGCCAACCGTGGGCTATCGGTGAAGTGCTGCCGACAGCTGTGGCGAACTCGTCACTGACCGCAGGCGATCTCATCTTCTCAATGGTGCTGATTTGCgg                       <  2:121483/140‑1 (MQ=255)
                                                                                                             tGGATTGCTGTAGAAGCGGGCTGGTTAGTGGCTGAATATGGCCGCCAACCGTGGGCTATCGGTGAAGTGCTGCCGACAGCTGTGGCGAACTCGTCACTGACCGCAGGCGATCTCATCTTCTCAATGGTGCTGATTTGCgg                       <  2:1056933/140‑1 (MQ=255)
                                                                                                              ggATTGCTGTAGAAGCGGGCTGGTTAGTGGCTGAATATGGCCGCCAACCGTGGGCTATCGGTGAAGTGCTGCCGACAGCTGTGGCGAACTCGTCACTGACCGCAGGCGATCTCATCTTCTCAATGGTGCTGATTTGCGGc                      <  1:1198180/140‑1 (MQ=255)
                                                                                                              ggATTGCTGTAGAAGCGGGCTGGTTAGTGGCTGAATATGGCCGCCAACCGTGGGCTATCGGTGAAGTGCTGCCGACAGCTGTGGCGAACTCGTCACTGACCGCAGGCGATCTCATCTTCTCAATGGTGCTGATTTGCGGc                      <  1:1239851/140‑1 (MQ=255)
                                                                                                               gATTGCTGTAGAAGCGGGCTGGTTAGTGGCTGAATATGGCCGCCAACCGTGGGCTATCGGTGAAGTGCTGCCGACAGCTGTGGCGAACTCGTCACTGACCGCAGGCGATCTCATCTTCTCAATGGTGCTGATTTGCGGcc                     <  1:2801555/140‑1 (MQ=255)
                                                                                                               gATTGCTGTAGAAGCGGGCTGGTTAGTGGCTGAATATGGCCGCCAACCGTGGGCTATCGGTGAAGTGCTGCCGACAGCTGTGGCGAACTCGTCACTGACCGCAGGCGATCTCATCTTCTCAATGGTGCTGATTTGCGGcc                     <  2:2737588/140‑1 (MQ=255)
                                                                                                                  tGCTGTAGAAGCGGGCTGGTTAGTGGCTGAATATGGCCGCCAACCGTGGGCTATCGGTGAAGTGCTGCCGACAGCTGTGGCGAACTCGTCACTGACCGCAGGCGATCTCATCTTCTCAATGGTGCTGATTTGCGGCCTGt                  <  1:2720267/140‑1 (MQ=255)
                                                                                                                    cTGTAGAAGCGGGCTGGTTAGTGGCTGAATATGGCCGCCAACCGTGGGCTATCGGTGAAGTGCTGCCGACAGCTGTGGCGAACTCGTCACTGACCGCAGGCGATCTCATCTTCTCAATGGTGCTGATTTGCgg                       >  1:1327100/1‑133 (MQ=255)
                                                                                                                    cTGTAGAAGCGGGCTGGTTAGTGGCTGAATATGGCCGCCAACCGTGGGCTATCGGTGAAGTGCTGCCGACAGCTGTGGCGAACTCGTCACTGACCGCAGGCGATCTCATCTTCTCAATGGTGCTGATTTGCgg                       >  2:1058052/1‑133 (MQ=255)
                                                                                                                    cTGTAGAAGCGGGCTGGTTAGTGGCTGAATATGGCCGCCAACCGTGGGCTATCGGTGAAGTGCTGCCGACAGCTGTGGCGAACTCGTCACTGACCGCAGGCGATCTCATCTTCTCAATGGTGCTGATTTGCgg                       <  1:1058052/133‑1 (MQ=255)
                                                                                                                    cTGTAGAAGCGGGCTGGTTAGTGGCTGAATATGGCCGCCAACCGTGGGCTATCGGTGAAGTGCTGCCGACAGCTGTGGCGAACTCGTCACTGACCGCAGGCGATCTCATCTTCTCAATGGTGCTGATTTGCgg                       <  2:1327100/133‑1 (MQ=255)
                                                                                                                    cTGTAGAAGCGGGCTGGTTAGTGGCTGAATATGGCCGCCAACCGTGGGCTATCGGTGAAGTGCTGCCGACAGCTGTGGCGAACTCGTCACTGACCGCAGGCGATCTCATCTTCTCAATGGTGCTGATTTGCgg                       <  2:1900446/133‑1 (MQ=255)
                                                                                                                    cTGTAGAAGCGGGCTGGTTAGTGGCTGAATATGGCCGCCAACCGTGGGCTATCGGTGAAGTGCTGCCGACAGCTGTGGCGAACTCGTCACTGACCGCAGGCGATCTCATCTTCTCAATGGTGCTGATTTGCgg                       >  1:1900446/1‑133 (MQ=255)
                                                                                                                       tAGAAGCGGGCTGGTTAGTGGCTGAATATGGCCGCCAACCGTGGGCTATCGGTGAAGTGCTGCCGACAGCTGTGGCGAACTCGTCACTGACCGCAGGCGATCTCATCTTCTCAATGGTGCTGATTTGCGGCATGTATAcc             <  1:1652288/140‑1 (MQ=255)
                                                                                                                               ggCTGGTTAGTGGCTGAATATGGCCGCCAACCGTGGGCTATCGGTGAAGTGCTGCCGACAGCTGTGGCGAACTCGTCACTGACCGCAGGCGATCTCATCTTCTCAATGGTGCTGATTTGCGGCCTGTATACCCTGTTCCt     >  2:3022108/1‑140 (MQ=255)
                                                                                                                               ggCTGGTTAGTGGCTGAATATGGCCGCCAACCGTGGGCTATCGGTGAAGTGCTGCCGACAGCTGTGGCGAACTCGTCACTGACCGCAGGCGATCTCATCTTCTCAATGGTGCTGATTTGCGGCCTGTATACCCTGTTCCt     >  1:2148675/1‑140 (MQ=255)
                                                                                                                               ggCTGGTTAGTGGCTGAATATGGCCGCCAACCGTGGGCTATCGGTGAAGTGCTGCCGACAGCTGTGGCGAACTCGTCACTGACCGCAGGCGATCTCATCTTCTCAATGGTGCTGATTTGCGGCCTGTATACCCTGTTCCt     >  1:330942/1‑140 (MQ=255)
                                                                                                                                  tGGTTAGTGGCTGAGTATGGCCGCCAACCGTGGGCTATCGGTGAAGTGCTGCCGACAGCTGTGGCGAACTCGTCACTGACCGCAGGCGATCTCATCTTCTCAATGGTGCTGATTTGCGGCCTGTATACCCTGTTCCtggt  <  2:1123540/140‑1 (MQ=255)
                                                                                                                                       |                                                                                                                                      
CTTCCTGCTTCTGGCAATCATCGCGCTCTCTTTCTGGAGTGTCATCCGCAACCGCATTGGCGAGAAAAAATGGCTTCTGCGCGCCGCGCTGTACGGTATTCCGCTGCCGTGGATTGCTGTAGAAGCGGGCTGGTTCGTGGCTGAATATGGCCGCCAACCGTGGGCTATCGGTGAAGTGCTGCCGACAGCTGTGGCGAACTCGTCACTGACCGCAGGCGATCTCATCTTCTCAATGGTGCTGATTTGCGGCCTGTATACCCTGTTCCTGGT  >  NC_000913/772648‑772917

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑