| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1207805 | 57 (0.460) | 65 (0.600) | 39/244 | 1.1 | 53.4% | coding (305/630 nt) | ycfK | e14 prophage; protein StfP |
| ? | NC_000913 | = 1209602 | 63 (0.580) | pseudogene (54/537 nt) | stfE | e14 prophage; putative side tail fiber protein fragment | |||||
Only 100 of 264 total aligned reads displayed.
GCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGG‑AGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGAT > NC_000913/1207666‑1207944 | tacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGG‑AGAAgg < 1:589501‑M1/16‑1 (MQ=255)tacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGG‑AGAAgg < 2:1500388‑M1/16‑1 (MQ=255)tacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGG‑AGAAgg < 1:1103522‑M1/16‑1 (MQ=255) ccAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGG‑AGAAGGa > 2:1117569/1‑140 (MQ=255) ttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGG‑AGAAGGAGCa > 2:249755‑M1/121‑140 (MQ=255) gCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGCTTGGCGATATCAAATCGGATCGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGG‑AGAAGGAGCa > 2:343236/1‑140 (MQ=255) tgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGG‑AGAAGGAGCaa < 2:1642108‑M1/21‑1 (MQ=255) tGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGG‑AGAAGGctctgca < 2:568824‑M1/140‑8 (MQ=255) agatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGG‑AGAAGGAGCAAAAc < 1:1592087‑M1/24‑1 (MQ=255) gaAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGG‑AGAAGGAGCAAAACTCa > 2:2079061/1‑140 (MQ=255) aaGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGG‑AGAAGGctctgcattacc < 1:1459305‑M1/140‑13 (MQ=255) gtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGG‑AGAAGGAGCAAAACTCAATg < 2:1407106‑M1/30‑1 (MQ=255) gggCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGG‑AGAAGGAGCAAAACTCAATgc > 1:225128/1‑140 (MQ=255) ttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGG‑AGAAGGAGCAAAACTCAATgcag < 1:1296009‑M1/33‑1 (MQ=255) ggcACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGG‑AGAAGGAGCAAAACTCAATgcagca < 1:1902527/140‑1 (MQ=255) ctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTTGG‑AGAAGGAGCAAAACTCAATgcagca > 1:1374369‑M1/106‑140 (MQ=255) gtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGG‑AGAAGGAGCAAAACTCAATGCAGCAACg < 1:527408‑M1/38‑1 (MQ=255) gtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGG‑AGAAGGAGCAAAACTCAATGCAGCAACg < 1:357287‑M1/38‑1 (MQ=255) gtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGG‑AGAAGGAGCAAAACTCAATGCAGCAACg < 1:2035615‑M1/38‑1 (MQ=255) gtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGG‑AGAAGGAGCAAAACTCAATGCAGCAACg < 2:798117‑M1/38‑1 (MQ=255) ggtcatttgttgatacgcgtacatagccaataagcatgttaaatcccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGG‑AGAAGGAGCAAAACTCAATGCAGCAACg < 2:1388901‑M1/38‑1 (MQ=255) tcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGG‑AGAAGGAGCAAAACTCAATGCAGCAACgg > 2:1103522‑M1/102‑140 (MQ=255) ccAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGG‑AGAAGGctctgcattacctgttggtgtcccgg < 2:1673342‑M1/140‑27 (MQ=255) ttacCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGG‑AGAAGGctctgcattacctgttggtgtcccggttccgtgg > 1:1394396‑M1/1‑106 (MQ=255) acCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGG‑AGAAGGctctgcattacctgttggtgtcccggttccgtggcc < 1:1961665‑M1/140‑37 (MQ=255) gcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGG‑AGAAGGAGCAAAACTCAATGCAGCaa > 1:889371‑M1/88‑123 (MQ=255) cgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGG‑AGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCa > 1:1135403‑M1/87‑140 (MQ=255) gtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGG‑AGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCAc > 1:1538371‑M1/86‑140 (MQ=255) tacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGG‑AGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCAcc < 2:87243‑M1/56‑1 (MQ=255) cACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGG‑AGAAGGctctgcattacctgttggtgtcccggttccgtggccttca > 2:202393‑M1/1‑100 (MQ=255) cACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGG‑AGAAGGctctgcattacctgttggtgtcccggttccgtggcc < 2:378868‑M1/136‑37 (MQ=255) cACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGG‑AGAAGGctctgcattacctgttggtgtcccggttccgtggcc > 1:378868‑M1/1‑100 (MQ=255) ttCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGG‑AGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagcc > 1:1683940‑M1/1‑97 (MQ=255) ttCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGG‑AGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagcc < 2:1933780‑M1/140‑44 (MQ=255) ttCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGG‑AGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagcc > 2:445606‑M1/1‑97 (MQ=255) ttCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGG‑AGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGt < 1:1329265/140‑1 (MQ=255) atagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGG‑AGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGt > 1:1351899‑M1/82‑140 (MQ=255) tCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGG‑AGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagcca > 1:1052513‑M1/1‑96 (MQ=255) tCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGG‑AGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCAcc < 2:1876853/136‑1 (MQ=255) ccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGG‑AGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCa < 1:1430078‑M1/63‑1 (MQ=255) ccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGG‑AGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCa > 1:87243‑M1/78‑140 (MQ=255) ccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGG‑AGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCa > 2:1135593‑M1/78‑140 (MQ=255) gcgcTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGG‑AGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactcc < 2:539760‑M1/140‑49 (MQ=255) gcgcTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGG‑AGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACTGGTTTCAt < 1:2068738/140‑1 (MQ=255) aataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGG‑AGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATa < 2:1020157‑M1/65‑1 (MQ=255) taagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGG‑AGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGc < 2:1011968‑M1/67‑1 (MQ=255) catgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGG‑AGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCtata > 2:134591‑M1/70‑140 (MQ=255) gttaaatccccctggtaaaagcaggaatgatgcctttctcttgttatttcttcattttcataaacgTTGATTTGGG‑AGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGCCGCACCGGTTTCATAGCTATACCg < 1:1769428‑M1/74‑1 (MQ=255) gttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGG‑AGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCg < 2:1841541‑M1/74‑1 (MQ=255) ccGCAAGAATCCGTTTGGCGATATCAGATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGG‑AGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggc > 2:1609584‑M1/1‑78 (MQ=255) ccGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGG‑AGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggc > 2:480912‑M1/1‑78 (MQ=255) gCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGG‑AGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctg > 1:1988187‑M1/1‑76 (MQ=255) gCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGG‑AGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctg < 1:817437‑M1/140‑65 (MQ=255) gCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGG‑AGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctg > 1:640143‑M1/1‑76 (MQ=255) gCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGG‑AGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctg > 2:1455632‑M1/1‑76 (MQ=255) gCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGG‑AGAAGGAGCAAAACTCGATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATg > 1:563003/1‑140 (MQ=255) ctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATtg < 1:69767‑M1/85‑1 (MQ=255) ctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGG‑AGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATtgg < 2:948949‑M1/85‑1 (MQ=255) ctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGG‑AGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATtgg > 2:1237673‑M1/56‑140 (MQ=255) aaTCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGG‑AGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATtgg < 1:512842/140‑1 (MQ=255) tCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGG‑AGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATtggtg < 1:1493658/140‑1 (MQ=255) aaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGG‑AGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTa > 2:886095‑M1/51‑140 (MQ=255) tttGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGG‑AGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTAt < 2:1542813/140‑1 (MQ=255) aagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGG‑AGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTAtt < 2:889580‑M1/92‑1 (MQ=255) aagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGG‑AGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTAtt > 2:1975163‑M1/49‑140 (MQ=255) gCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGG‑AGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAg < 2:2000754/140‑1 (MQ=255) caggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGG‑AGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAg > 1:1020157‑M1/46‑140 (MQ=255) gATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGG‑AGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCa < 1:1484668/140‑1 (MQ=255) gaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGG‑AGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCaa < 2:1282458‑M1/98‑1 (MQ=255) gaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGG‑AGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCaa > 2:357287‑M1/43‑140 (MQ=255) atCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGG‑AGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgcttt < 1:202393‑M1/140‑85 (MQ=255) atCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGG‑AGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATc < 1:927166/140‑1 (MQ=255) tgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGG‑AGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTa < 1:1425427‑M1/104‑1 (MQ=255) aTGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGG‑AGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaa < 1:445606‑M1/140‑95 (MQ=255) aTGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGG‑AGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaa > 2:14540‑M1/1‑46 (MQ=255) tGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGG‑AGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTc > 2:1187950/1‑140 (MQ=255) gCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGG‑AGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAg < 2:703218/140‑1 (MQ=255) cACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGG‑AGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGt < 1:305856/140‑1 (MQ=255) gttatttcttcattttcataaacgTTGGTTTGGG‑AGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTgg > 2:2044996‑M1/25‑140 (MQ=255) gtgCAAACGGCTCTCGAAAACCTTGGTTTGGG‑AGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTgggg > 2:1904951/1‑140 (MQ=255) tgCAAACGGCTCTCGAAAACCTTGGTTTGGG‑AGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccg > 1:263357‑M1/1‑37 (MQ=255) tgCAAACGGCTCTCGAAAACCTTGGTTTGGG‑AGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccg > 1:432908‑M1/1‑37 (MQ=255) tgCAAACGGCTCTCGAAAACCTTGGTTTGGG‑AGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccg > 2:1059395‑M1/1‑37 (MQ=255) tgCAAACGGCTCTCGAAAACCTTGGTTTGGG‑AGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacc > 1:1190741‑M1/1‑37 (MQ=255) tgCAAACGGCTCTCGAAAACCTTGGTTTGGG‑AGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccaccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccg > 2:808524‑M1/1‑37 (MQ=255) tgCAAACGGCTCTCGAAAACCTTGGTTTGGG‑AGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTc < 1:1653786/132‑1 (MQ=255) aaaCGGCTCTCGAAAACCTTGGTTTGGG‑AGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaa < 2:1493517‑M1/140‑107 (MQ=255) gCTCTCGAAAACCTTGGTTTGGG‑AGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggc < 1:1000850‑M1/140‑112 (MQ=255) tctcGAAAACCTTGGTTTGGG‑AGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaa > 1:1950686‑M1/1‑27 (MQ=255) tctcGAAAACCTTGGTTTGGG‑AGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaa > 1:1635948‑M1/1‑27 (MQ=255) cTTGGTTTGGG‑AGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATc < 2:1168432/140‑1 (MQ=255) TGGTTTGGG‑AGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTg > 1:1063088‑M1/1‑140 (MQ=255) TGGA‑AGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCctct > 2:1754273‑M1/1‑140 (MQ=255) ggg‑AGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttatgctgaagaatacccggaactggcaaaggcttatccgacaaata > 2:1267941‑M1/1‑9 (MQ=255) GGG‑AGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTg > 1:480969‑M1/1‑140 (MQ=255) G‑AGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTggg > 1:1841541‑M1/1‑140 (MQ=255) AGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTgggg > 2:1430078‑M1/1‑140 (MQ=255) aGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaattgc > 1:77459‑M1/1‑3 (MQ=255) AGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTggggggg < 1:1716974‑M1/140‑1 (MQ=255) GGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGa > 1:1011968‑M1/1‑140 (MQ=255) | GCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGG‑AGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGAT > NC_000913/1207666‑1207944 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |