| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NC_000913 | 2,048,724 | Δ5 bp | coding (3787‑3791/7077 nt) | yeeJ → | inverse autotransporter adhesin |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2048723 | 6 (0.050) | 53 (0.430) | 33/276 | 1.9 | 89.1% | coding (3786/7077 nt) | yeeJ | inverse autotransporter adhesin |
| ? | NC_000913 | 2048729 = | 7 (0.060) | coding (3792/7077 nt) | yeeJ | inverse autotransporter adhesin | |||||
TTTGGTGAGAAGACGGTTACTGCATCACTGGCTAATAATGGTGCCAGCGACAACAAAACTGTGCATTTTATTGGCGACACAGCGGCGGCAAAAATTATCGAGTTGGCGCCTGTCCCAGACAGCATAATCGCCGGTACCCCGCAGAACAGCTCCGGCAGCGTCATCACCGCCACAGTCGTTGATAATAATGGCTTTCCGGTGAAAGGTGTGACTGTGAACTTCACCAGCAACGCAGCGACAGCCGAAATGACGAACGGCGGTCAAGCCGTGACGA > NC_000913/2048586‑2048859 | tttGGTGAGAAGACGGTTACTGCATCACTGGCTAATAATGGTGCCAGCGACAACAAAACTGTGCATTTTATTGGCGACACAGCGGCGGCAAAAATTATCGAGTTGGCGCCTGTCCCAGACAGCATAATCGCCGGTACCga < 2:1976832‑M1/140‑3 (MQ=255) ttGGTGAGAAGACGGTTACTGCATCACTGGCTAATAATGGTGCCAGCGACAACAAAACTGTGCATTTTATTGGCGACACAGCGGCGGCAAAAATTATCGAGTTGGCGCCTGTCCCAGACAGCATAATCGCCGGTACCgaa < 1:798846‑M1/140‑4 (MQ=255) aagaCGGTTACTGCATCACTGGCTAATAATGGTGCCAGCGACAACAAAACTGTGCATTTTATTGGCGACACAGCGGCGGCAAAAATTATCGAGTTGGCGCCTGTCCCAGACAGCATAATCGCCGGTACCgaacagctccg < 2:714209‑M1/140‑12 (MQ=255) ggTTACTGCATCACTGGCTAATAATGGTGCCAGCGACAACAAAACTGTGCATTTTATTGGCGACACAGCGGCGGCAAAAATTATCGAGTTGGCGCCTGTCCCAGACAGCATAATCGCCGGTACCgaacagctccggcagc > 1:1281950‑M1/1‑124 (MQ=255) gTTACTGCATCACTGGCTAATAATGGTGCCAGCGACAACAAAACTGTGCATTTTATTGGCGACACAGCGGCGGCAAAAATTATCGAGTTGGCGCCTGTCCCAGACAGCATAATCGCCGGTACCgaacagctccggcagcg < 2:855571‑M1/140‑18 (MQ=255) cTGCATCACTGGCTAATAATGGTGCCAGCGACAACAAAACTGTGCATTTTATTGGCGACACAGCGGCGGCAAAAATTATCGAGTTGGCGCCTGTCCCAGACAGCATAATCGCCGGTACCgaacagctccg > 1:1710301‑M1/1‑119 (MQ=255) cTGCATCACTGGCTAATAATGGTGCCAGCGACAACAAAACTGTGCATTTTATTGGCGACACAGCGGCGGCAAAAATTATCGAGTTGGCGCCTGTCCCAGACAGCATAATCGCCGGTACCgaacagctccg < 2:1710301‑M1/130‑12 (MQ=255) gCATCACTGGCTAATAATGGTGCCAGCGACAACAAAACTGTGCATTTTATTGGCGACACAGCGGCGGCAAAAATTATCGAGTTGGCGCCTGTCCCAGACAGCATAATCGCCGGTACCgaacagctccggcagcgtcatca > 1:418337‑M1/1‑117 (MQ=255) cATCACTGGCTAATAAGGGTGCCAGCGACAACAAACCTGTGCTTTTTATTGGCGACACAGCGGCGGAAAAAATTATCGAGTGGGCGCCTGCCCCAGACAGCATAATCGCCGGTACCgaacagccccggcagcgtcatcac < 2:52623‑M1/140‑25 (MQ=255) aCTGGCTAATAATGGTGCCAGCGACAACAAAACTGTGCATTTTATTGGCGACACAGCGGCGGCAAAAATTATCGAGTTGGCGCCTGTCCCAGACAGCATAATCGCCGGTACCgaacagctccggcagcgtcatcaccgcc > 1:571552‑M1/1‑112 (MQ=255) aCTGGCTAATAATGGTGCCAGCGACAACAAAACTGTGCATTTTATTGGCGACACAGCGGCGGCAAAAATTATCGAGTTGGCGCCTGTCCCAGACAGCATAATCGCCGGTACCgaacagctccggcagcgtcatcaccgcc > 1:53354‑M1/1‑112 (MQ=255) aCTGGCTAATAATGGTGCCAGCGACAACAAAACTGTGCATTTTATTGGCGACACAGCGGCGGCAAAAATTATCGAGTTGGCGCCTGTCCCAGACAGCATAATCGCCGGTACCgaacagctccggcagcgtcatcaccgcc > 1:248281‑M1/1‑112 (MQ=255) cTGGCTAATAATGGTGCCAGCAAAAAAAAACCTGTGCTTTTTATGGGCGACACGGCGGCGAAAAAAATTATCGAGTGGGCGCCTGCCCCAGACAGCATAATCGCCGGTCCCgaacagctccggcagcgtcatcaccgcca < 2:1195636‑M1/140‑30 (MQ=255) ggCTAATAATGGCGCGAGCAAAAAAAAAACTGTGCTTTTTATGGGCGACACAGGGGGGCAAAAAATTATCGTTTGGGCGCTTGCCCCAGACAGAAAAATCGCCGTTAC‑‑‑‑CA‑AACATCTCCGGCAGCGTCATCACCGCcaca < 2:1194670/140‑1 (MQ=255) gcaaataagGGGGCCAGCGACAAAAAACCTGTGCTTTTTATGGGCGACACAGCGGCGGCAAAAATTATCGGGTGGGCGCCTGCCCCAGACAGCATAATCGCCGGTACC‑‑‑‑‑GAACAGCCCCGGCAGCGTCATCACCGCCACAg < 2:546534/137‑1 (MQ=255) gCTAATAATGGTGCCAGCGACAACAAAACTGTGCATTTTATTGGCGACACAGCGGCGGCAAAAATTATCGAGTTGGCGCCTGTCCCAGACAGCATAATCGCCGGTACCgaacagctccggcagcgtcatcaccgccacag > 1:1558398‑M1/1‑108 (MQ=255) gCTAATAATGGTGCCAGCGACAACAAAACTGTGCATTTTATTGGCGACACAGCGGCGGCAAAAATTATCGAGTTGGCGCCTGTCCCAGACAGCATAATCGCCGGTACCgaacagctccggcagcgtcatcaccgccacag > 1:52623‑M1/1‑108 (MQ=255) gCTAATAAGGGTGCCGGGAAAAAAAAATTTGTGCTTTTTATTGGCGACACAGCGGCGGCAAAAATTATGGAGTTGGCGCTTGCCCCAGACAGAAAAATCGCGGGTAC‑‑‑‑CA‑AACAGCCCCGGCAGCGTCATCACCGCCACAg < 2:1905862/140‑1 (MQ=255) ataatGGTGCCAGCGACAACAAAACTGTGCATTTTATTGGCGACACGGCGGCGGAAAAAATTATCGAGTTGGCGCCTGTCCAAGACAGCATAATCGCCGGTACCgaacagctccggcggcgtcatcaccgccacagtcgt < 2:1180372‑M1/140‑37 (MQ=255) aaagggtgccAGCGACAACAAACCTGTGCTTTTTATTGGCGACACAGCGGGGGCAAAAATTATCGAGTTGGCGCCTGCCCCAGACAGCATAATCGCCGGTACCgaacagctccggcagcgtcatcaccgccacagtcgtt < 2:652460‑M1/136‑38 (MQ=255) gTGCCAGCGACAACAAAACTGTGCATTTTATTGGCGACACAGCGGCGGCAAAAATTATCGAGTTGGCGCCTGTCCCAGACAGCATAATCGCCGGTACCgaacagctccggcagcgtcatcaccgccacagtcgttgataa > 1:1905862‑M1/1‑98 (MQ=255) gTGCCAGCGACAACAAAACTGTGCATTTTATTGGCGACACAGCGGCGGCAAAAATTATCGAGTTGGCGCCTGTCCCAGACAGCATAATCGCCGGTACCgaacagctccggcagcgtcatcaccgccacagtcgttgataa > 2:1618919‑M1/1‑98 (MQ=255) gTGCCAGCGACAACAAAACTGTGCATTTTATTGGCGACACAGCGGCGGCAAAAATTATCGAGTTGGCGCCTGTCCCAGACAGCATAATCGCCGGTACCgaacagctccggcagcgtcatcaccgccacagtcgttgataa > 1:1280913‑M1/1‑98 (MQ=255) gCCAGCGACAACAAAACTGTGCATTTTATTGGCGACACAGCGGCGGCAAAAATTATCGAGTTGGCGCCTGTCCCAGACAGCATAATCGCCGGTACCgaacagctccggcagcgtcatcaccgccacagtcgttgataata > 1:1003215‑M1/1‑96 (MQ=255) aGCGACAACAAAACTGTGCATTTTATTGGCGACACAGCGGCGGCAAAAATTATCGAGTTGGCGCCTGTCCCAGACAGCATAATCGCCGGTACCgaacagctccggcagcgtcatcaccgccacagtcgttgataataatg > 1:1168679‑M1/1‑93 (MQ=255) aGCAACAAAAAAACTGTGCTTTTTATGGGCGACACAGGGGCGGAAAAAATTATCGTGTGGGCGCCTCCCCCACACAGCAAAAGCGCCGGTACC‑‑‑‑‑GAACAGCTCCGGCGGCGTCATCACCGCCACAGTCGTTGATAATAATg < 2:1450486/140‑1 (MQ=255) aacaaAACTGTGCATTTTATTGGCGACACAGCGGCGGCAAAAATTATCGAGTTGGCGCCTGTCCCAGACAGCATAATCGCCGGTACCgaacagctccggcagcgtcatcaccgccacagtcgttgataataatggctttc > 1:2016905‑M1/1‑87 (MQ=255) aacaaAACTGTGCATTTTATTGGCGACACAGCGGCGGCAAAAATTATCGAGTTGGCGCCTGTCCCAGACAGCATAATCGCCGGTACCgaacagctccggcagcgtcatcaccgccacagtcgttgataataatggctttc > 2:1824762‑M1/1‑87 (MQ=255) attttgcattTTATTGGCGACACGGCGGCGGAAAAATTTATCGGGTTGGCGCCTGCCCAAGACAGAATAATCGCCGGTACCaaacagctccggaagcgtcatcaccgccacagtcgttgataataatggctttccggtga < 2:1860843‑M1/136‑60 (MQ=255) tggtgtttttttttggcgacACAGGGGCGGAAAAAATTATCGTGTTGGCCCCTGTCCCAGACAGCATAATCGCCGGTACCgaacacccccggcggcgtcatcaccgccacagtcgttgataataatggctttccggtgaa < 2:1281950‑M1/133‑61 (MQ=255) tgCATTTTATTGGCGACACAGCGGCGGCAAAAATTATCGAGTTGGCGCCTGTCCCAGACAGCATAATCGCCGGTACCgaacagctccggcagcgtcatcaccgccacagtcgttgataataatggctttccggtgaaagg > 1:1250761‑M1/1‑77 (MQ=255) tgCATTTTATTGGCGACACAGCGGCGGCAAAAATTATCGAGTTGGCGCCTGTCCCAGACAGCATAATCGCCGGTACCgaacagctccggcagcgtcatcaccgccacagtcgttgataataatggctttccggtgaaagg > 1:579782‑M1/1‑77 (MQ=255) tgCATTTTATTGGCGACACAGCGGCGGCAAAAATTATCGAGTTGGCGCCTGTCCCAGACAGCATAATCGCCGGTACCgaacagctccggcagcgtcatcaccgccacagtcgttgataataatggctttccggtgaaagg > 1:934399‑M1/1‑77 (MQ=255) cATTTTATTGGCGACACAGCGGCGGCAAAAATTATCGAGTTGGCGCCTGTCCCAGACAGCATAATCGCCGGTACCgaacagctccggcagcgtcatcaccgccacagtcgttgataataatggctttccggtgaaaggtg > 2:1796469‑M1/1‑75 (MQ=255) cATTTTATTGGCGACACAGCGGCGGCAAAAATTATCGAGTTGGCGCCTGTCCCAGACAGCATAATCGCCGGTACCgaacagctccggcagcgtcatcaccgccacagtcgttgataataatggctttccggtgaaaggtg > 1:522438‑M1/1‑75 (MQ=255) cATTTTATTGGCGACACAGCGGCGGCAAAAATTATCGAGTTGGCGCCTGTCCCAGACAGCATAATCGCCGGTACCgaacagctccggcagcgtcatcaccgccacagtcgttgataataatggctttccggtgaaaggtg > 1:674709‑M1/1‑75 (MQ=255) cATTTTATTGGCGACACAGCGGCGGCAAAAATTATCGAGTGGGCGCCTGCCCCAGACAGCATAATCGCCGGTACCgaacagctccggcggcgtcatcaccgccacagtcgttgataataatggctttccggtgaaaggtg < 2:137358‑M1/140‑66 (MQ=255) tttttaTGGGCGACACGGGGGCGGAAAAAATTATCGAGTGGGCGCTTGCCCCAGACAGCAAAATCGCCGGTACAaaacagctccggcagcgtcatcaccgccacagtcgttgataataatggctttccggtgaaaggtgt < 2:2013694‑M1/139‑67 (MQ=255) tATTGGCGACACAGCCGCGGCAAAAATTATCGAGTTGGCGCCTGTCCCAGACAGCATAATCGCCGGTACCgaacagctccggcagcgtcatcaccgccacagtcgttgataataatggctttccggtgaaaggtgtgact > 1:1346903‑M1/1‑70 (MQ=255) ttgggCGACACAGCGGCGGAAAAATTTAACGGGTGGGCCCCGTCCCCAGACACCAAACCCGCCGGTACC‑‑‑‑‑GAACACCCCGGGGAGCGTCATCACCGCCACAGTCGTTGATAATAATGGCTTTCCGGTGAAAGGTGTGACtg < 2:1977307/137‑1 (MQ=255) tGGCGACACAGCGGCGGCAAAAATTATCGAGTTGGCGCCTGTCCCAGACAGCATAATCGCCGGTACCgaacagctccggcagcgtcatcaccgccacagtcgttgataataatggctttccggtgaaaggtgtgactgtg > 1:576643‑M1/1‑67 (MQ=255) caGCGGCGCAAAAAATGATTGGTTGGGCGCCTGTCCCAAAAAGCATACTCGCGGCTA‑‑‑CG‑A‑AACACCCCCGGTGGCGTCGTAACCGCCACAGTCGTTGATAATAATGGCTTTCCGGTGAAAGGTGTGACTGTGAACTTCAc < 2:736214/140‑1 (MQ=255) gcAAAAATTATCGAGTTGGCGCCTGTCCCAGACAGCATAATCGCCGGTACCgaacagctccggcagcgtcatcaccgccacagtcgttgataataatggctttccggtgaaaggtgtgactgtgaacttcaccagcaacg > 1:988969‑M1/1‑51 (MQ=255) aaaaaaattATCGAGTGGGCGCCTGCCCCAGACAGCATAATCGCGGGTACCgaacagctccggcagcgtcatcaccgccacagtcgttgataataatggctttccggtgaaaggtgtgactgtgaacttcaccagcaacg < 2:1701060‑M1/138‑90 (MQ=255) aaaaaaattATCGAGTGGGCGCCTGCCCCAGACAGCAAAATCGCCGGTCCCgaacagctccggcagcgtcatcaccgccacagtcgttgataataatggctttccggtgaaaggtgtgactgtgaacttcaccagcaacg < 2:1571398‑M1/138‑90 (MQ=255) agccagcATAACCGCGGGTACCaaacacccccggcagcttcatccccgccacagtcgttgataataatggctttccggtgaaaggtgtgactgtgaacttcaccagcaacgcagcgacagccgaaatgacgaacggcggt < 2:536214‑M1/137‑119 (MQ=255) cATAATCGCCGGTACCgaacagctccggcagcgtcatcaccgccacagtcgttgataataatggctttccggtgaaaggtgtgactgtgaacttcaccagcaacgcagcgacagccgaaatgacgaacggcggtcaagcc > 1:1934407‑M1/1‑16 (MQ=255) cATAATCGCCGGTACCgaacagctccggcagcgtcatcaccgccacagtcgttgataataatggctttccggtgaaaggtgtgactgtgaacttcaccagcaacgcagcgacagccgaaatgacgaacggcggtcaagcc > 2:1975977‑M1/1‑16 (MQ=255) cATAATCGCCGGTACCgaacagctccggcagcgtcatcaccgccacagtcgttgataataatggctttccggtgaaaggtgtgactgtgaacttcaccagcaacgcagcgacagccgaaatgacgaacggcggtcaagcc > 1:1580118‑M1/1‑16 (MQ=255) cATAATCGCCGGTACCgaacagctccggcagcgtcatcaccgccacagtcgttgataataatggctttccggtgaaaggtgtgactgtgaacttcaccagcaacgcagcgacagccgaaatgacgaacggcggtcaagcc > 1:83506‑M1/1‑16 (MQ=255) cATAATCGCCGGTACCgaacagctccggcagcgtcatcaccgccacagtcgttgataataatggctttccggtgaaaggtgtgactgtgaacttcaccagcaacgcagcgacagccgaaatgacgaacggcggtcaagcc > 1:926117‑M1/1‑16 (MQ=255) cATAATCGCCGGTACCgaacagctccggcagcgtcatcaccgccacagtcgttgataataatggctttccggtgaaaggtgtgactgtgaacttcaccagcaacgcagcgacagccgaaatgacgaacggcggtcaagcc > 1:803964‑M1/1‑16 (MQ=255) cATAATCGCCGGTACCgaacagctccggcagcgtcatcaccgccacagtcgttgataataatggctttccggtgaaaggtgtgactgtgaacttcaccagcaacgcagcgacagccgaaatgacgaacggcggtcaagcc > 2:140363‑M1/1‑16 (MQ=255) cATAATCGCCGGTACCgaacagctccggcagcgtcatcaccgccacagtcgttgataataatggctttccggtgaaaggtgtgactgtgaacttcaccagcaacgcagcgacagccgaaatgacgaacggcggtcaagcc > 1:737066‑M1/1‑16 (MQ=255) cATAATCGCCGGTACCgaacagctccggcagcgtcatcaccgccacagtcgttgataataatggctttccggtgaaaggagtgactgtgaacttcaccagcaacgcagcgacagccgaaatgacgaacggcggtcaagcc > 1:1742128‑M1/1‑16 (MQ=255) cgggtaCCaaacggccccggcggcgtcatccccgccacagtcgttgataataatggctttccggtgaaaggtgtgactgtgaacttcaccagcaacgcagcgacagccgaaatgacgaacggcggtcaagccgtgacgaa < 2:571552‑M1/138‑133 (MQ=255) ccGGTACCgaacagctccggcagcgtcatcaccgccacagtcgttgataataatggctttccggtgaaaggtgtgactgtgaacttcaccagcaacgcagcgacagccgaaatgacgaacggcggtcaagccgtgacgaa > 1:989259‑M1/1‑8 (MQ=255) gTACCaaacagctccgagggcgtcatcaccgccacagtcgttgataataatggctttccggtgaaaggtgtgactgtgaacttcaccagcaacgcagcgacagccgaaatgacgaacggcggtcaagccgtgacgaacga < 2:2016905‑M1/140‑136 (MQ=255) tcccgaacagccccggcggcgtcatccccgccacagtcgttgataataatggctttccggtgaaaggtgtgactgtgaacttcaccagcaacgcagcgacagccgaaatgacgaacggcggtcaagccgtgacgaacgaa < 2:674709‑M1/138‑137 (MQ=255) | TTTGGTGAGAAGACGGTTACTGCATCACTGGCTAATAATGGTGCCAGCGACAACAAAACTGTGCATTTTATTGGCGACACAGCGGCGGCAAAAATTATCGAGTTGGCGCCTGTCCCAGACAGCATAATCGCCGGTACCCCGCAGAACAGCTCCGGCAGCGTCATCACCGCCACAGTCGTTGATAATAATGGCTTTCCGGTGAAAGGTGTGACTGTGAACTTCACCAGCAACGCAGCGACAGCCGAAATGACGAACGGCGGTCAAGCCGTGACGA > NC_000913/2048586‑2048859 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |