BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,734,694	C→A	D325E (GAC→GAA)	xylH →	xylose ABC transporter membrane subunit

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,734,694	0	C	A	100.0%	484.7 / NA	134	D325E (GAC→GAA)	xylH	xylose ABC transporter membrane subunit
Reads supporting (aligned to +/- strand): ref base C (0/0); new base A (58/76); total (58/76)

Only 100 of 138 total aligned reads displayed.

CTCCGGGATTAACGTTGAACGCACCAAACTTGCCGTGTTCGCGATTAACGGATTAATGGTAGCCATCGCCGGATTAATCCTTAGTTCTCGACTTGGCGCTGGTTCACCTTCTGCGGGAAATATCGCCGAACTGGACGCAATTGCAGCATGCGTGATTGGCGGCACCAGCCTGGCTGGCGGTGTGGGAAGCGTTGCCGGAGCAGTAATGGGGGCATTTATCATGGCTTCACTGGATAACGGCATGAGTATGATGGATGTACCGACCTTCTGG  >  NC_000913/3734559‑3734829

ctcCGGGATTAACGTTGAACGCACCAAACTTGCCGTGTTCGCGATTAACGGATTAATGGTAGCCATCGCCGGATTAATCCTTAGTTCTCGACTTGGCGCTGGTTCACCTTCTGCGGGAAATATCGCCGAACTGGAAGCac                                                                                                                                     >  1:580357/1‑139 (MQ=255)

 tcCGGGATTAACGTTGAACGCACCAAACTTGCCGTGTTCGCGATTAACGGATTAATGGTAGCCATCGCCGGATTAATCCTTAGTTCTCGACTTGGCGCTGGTTCACCTTCTGCGGGAAATATCGCCGAACTGGAAGCAAt                                                                                                                                    >  2:284617/1‑140 (MQ=255)

 tcCGGGATTAACGTTGAACGCACCAAACTTGCCGTGTTCGCGATTAACGGATTAATGGTAGCCATCGCCGGATTAATCCTTAGTTCTCGACTTGGCGCTGGTTCACCTTCTGCGGGAAATATCGCCGAACTGGAAGCAAt                                                                                                                                    >  2:1036244/1‑140 (MQ=255)

   cGGGATTAACGTTGAACGCACCAAACTTGCCGTGTTCGCGATTAACGGATTAATGGTAGCCATCGCCGGGTTAATCCTTAGTTCTCGACTTGGCGCTGGTTCACCTTCTGCGGGAAATATCGCCGAACTGGAAGCAATTg                                                                                                                                  <  1:267082/140‑1 (MQ=255)

   cGGGATTAACGTTGAACGCACCAAACTTGCCGTGTTCGCGATTAACGGATTAATGGTAGCCATCGCCGGATTAATCCTTAGTTCTCGACTTGGCGCTGGTTCACCTTCTGCGGGAAATATCGCCGAACTGGAAGCAATTg                                                                                                                                  <  1:458500/140‑1 (MQ=255)

     ggATTAACGTTGAACGCACCAAACTTGCCGTGTTCGCGATTAACGGATTAATGGTAGCCATCGCCGGATTAATCCTTAGTTCTCGACTTGGCGCTGGTTCACCTTCTGCGGGAAATATCGCCGAACTGGAAGCAATTgca                                                                                                                                <  2:773098/140‑1 (MQ=255)

      gATTAACGTTGAACGCACCAAACTTGCCGTGTTCGCGATTAACGGATTAATGGTAGCCATCGCCGGATTAATCCTTAGTTCTCGACTTGGCGCTGGTTCACCTTCTGCGGGAAATATCGCCGAACTGGAAGCAATTgcag                                                                                                                               <  1:2048058/140‑1 (MQ=255)

         tAACGTTGAACGCACCAAACTTGCCGTGTTCGCGATTAACGGATTAATGGTAGCCATCGCCGGATTAATCCTTAGTTCTCGACTTGGCGCTGGTTCACCTTCTGCGGGAAATATCGCCGAACTGGAAGCAATTGCAGCAt                                                                                                                            <  2:90327/140‑1 (MQ=255)

                gAACGCACCAAACTTGCCGTGTTCGCGATTAACGGATTAATGGTAGCCATCGCCGGATTAATCCTTAGTTCTCGACTTGGCGCTGGTTCACCTTCTGCGGGAAATATCGCCGAACTGGAAGCAATTGCAGCATGCGTGAt                                                                                                                     >  1:1896436/1‑140 (MQ=255)

                gAACGCACCAAACTTGCCGTGTTCGCGATTAACGGATTAATGGTAGCCATCGCCGGATTAATCCTTAGTTCTCGACTTGGCGCTGGTTCACCTTCTGCGGGAAATATCGCCGAACTGGAAGCAATTGCAGCATGCGTGAt                                                                                                                     >  1:600409/1‑140 (MQ=255)

                 aaCGCACCAAACTTGCCGTGTTCGCGATTAACGGATTAATGGTAGCCATCGCCGGATTAATCCTTAGTTCTCGACTTGGCGCTGGTTCACCTTCTGCGGGAAATATCGCCGAACTGGAAGCAATTGCAGCATGCGTGAtt                                                                                                                    >  2:1099147/1‑140 (MQ=255)

                   cGCACCAAACTTGCCGTGTTCGCGATTAACGGATTAATGGTAGCCATCGCCGGATTAATCCTTAGTTCTCGACTTGGCGCTGGTTCACCTTCTGCGGGAAATATCGCCGAACTGGAAGCAATTGCAGCATGCGTGATTgg                                                                                                                  <  2:589203/140‑1 (MQ=255)

                   cGCACCAAACTTGCCGTGTTCGCGATTAACGGATTAATGGTAGCCATCGCCGGATTAATCCTTAGTTCTCGACTTGGCGCTGGTTCACCTTCTGCGGGAAATATCGCCGAACTGGAAGCAATTGCAGCATGCGTGATTgg                                                                                                                  >  2:377463/1‑140 (MQ=255)

                        cAAACTTGCCGTGTTCGCGATTAACGGATTAATGGTAGCCATCGCCGGATTAATCCTTAGTTCTCGACTTGGCGCTGGTTCACCTTCTGCGGGAAATATCGCCGAACTGGAAGCAATTGCAGCATGCGTGATTGGCGGCa                                                                                                             <  1:574582/140‑1 (MQ=255)

                         aaaCTTGCCGTGTTCGCGATTAACGGATTAATGGTAGCCATCGCCGGATTAATCCTTAGTTCTCGACTTGGCGCTGGTTCACCTTCTGCGGGAAATATCGCCGAACTGGAAGCAATTGCAGCATGCGTGATTGGCGGCAc                                                                                                            <  1:988851/140‑1 (MQ=255)

                             ttGCCGTGTTCGCGATTAACGGATTAATGGTAGCCATCGCCGGATTAATCCTTAGTTCTCGACTTGGCGCTGGTTCACCTTCTGCGGGAAATATCGCCGAACTGGAAGCAATTGCAGCATGCGTGATTGGCGGCACCAGc                                                                                                        <  1:813836/140‑1 (MQ=255)

                               gCCGTGTTCGCGATTAACGGATTAATGGTAGCCATCGCCGGATTAATCCTTAGTTCTCGACTTGGCGCTGGTTCACCTTCTGCGGGAAATATCGCCGAACTGGAAGCAATTGCAGCATGCGTGATTGGCGGCACCAGCct                                                                                                      >  2:2019608/1‑140 (MQ=255)

                                     ttCGCGATTAACGGATTAATGGTAGCCATCGCCGGATTAATCCTTAGTTCTCGACTTGGCGCTGGTTCACCTTCTGCGGGAAATATCGCCGAACTGGAAGCAATTGCAGCATGCGTGATTGGCGGCACCAGCctggctgg                                                                                                >  1:1272675/1‑140 (MQ=255)

                                     ttCGCGATTAACGGATTAATGGTAGCCATCGCCGGATTAATCCTTAGTTCTCGACTTGGCGCTGGTTCACCTTCTGCGGGAAATATCGCCGAACTGGAAGCAATTGCAGCATGCGTGATTGGCGGCACCAGCctggctgg                                                                                                >  2:439902/1‑140 (MQ=255)

                                     ttCGCGATTAACGGATTAATGGTAGCCATCGCCGGATTAATCCTTAGTTCTCGACTTGGCGCTGGTTCACCTTCTGCGGGAAATATCGCCGAACTGGAAGCAATTGCAGCATGCGTGATTGGCGGCACCAGCctggctgg                                                                                                <  2:120258/140‑1 (MQ=255)

                                     ttCGCGATTAACGGATTAATGGTAGCCATCGCCGGATTAATCCTTAGTTCTCGACTTGGCGCTGGTTCACCTTCTGCGGGAAATATCGCCGAACTGGAAGCAATTGCAGCATGCGTGATTGGCGGCACCAGCctggctgg                                                                                                >  1:1193126/1‑140 (MQ=255)

                                        gcgATTAACGGATTAATGGTAGCCATCGCCGGATTAATCCTTAGTTCTCGACTTGGCGCTGGTTCACCTTCTGCGGGAAATATCGCCGAACTGGAAGCAATTGCAGCATGCGTGATTGGCGGCACCAGCCTGGCTGGCgg                                                                                             <  1:439902/140‑1 (MQ=255)

                                               aCGGATTAATGGTAGCCATCGCCGGATTAATCCTTAGTTCTCGACTTGGCGCTGGTTCACCTTCTGCGGGAAATATCGCCGAACTGGAAGCAATTGCAGCATGCGTGATTGGCGGCACCAGCCTGGCTGGCGGTGTGGGa                                                                                      >  2:1133079/1‑140 (MQ=255)

                                               aCGGATTAATGGTAGCCATCGCCGGATTAATCCTTAGTTCTCGACTTGGCGCTGGTTCACCTTCTGCGGGAAATATCGCCGAACTGGAAGCAATTGCAGCATGCGTGATTGGCGGCACCAGCCTGGCTGGCGGTGTGGGa                                                                                      >  1:767308/1‑140 (MQ=255)

                                                   aTTAATGGTAGCCATCGCCGGATTAATCCTTAGTTCTCGAC‑TGGCGCTGGTTCACCTTCTGCGGGAAATATCGCCGAACTGGAAGCAATTGCAGCATGCGTGATTGGCGGCACCAGCCTGGCTGGCGGTGTGGGAAGCGt                                                                                 >  1:349032/1‑140 (MQ=255)

                                                    ttAATGGTAGCCATCGCCGGATTAATCCTTAGTTCTCGACTTGGCGCTGGTTCACCTTCTGCGGGAAATATCGCCGAACTGGAAGCAATTGCAGCATGCGTGATTGGCGGCACCAGCCTGGCTGGCGGTGTGGGAAGCGt                                                                                 >  1:1864387/1‑140 (MQ=255)

                                                         ggTAGCCATCGCCGGATTAATCCTTAGTTCTCGACTTGGCGCTGGTTCACCTTCTGCGGGAAATATCGCCGAACTGGAAGCAATTGCAGCATGCGTGATTGGCGGCACCAGCCTGGCTGGCGGTGTGGGAAGCGTTGCCg                                                                            <  1:195387/140‑1 (MQ=255)

                                                         ggTAGCCATCGCCGGATTAATCCTTAGTTCTCGACTTGGCGCTGGTTCACCTTCTGCGGGAAATATCGCCGAACTGGAAGCAATTGCAGCATGCGTGATTGGCGGCACCAGCCTGGCTGGCGGTGTGGGAAGCGTTGCCg                                                                            <  1:1942497/140‑1 (MQ=255)

                                                            ggCCATCGCCGGATTAATCCTTAGTTCTCGACTTGGCGCTGGTTCACCTTCTGCGGGAAATATCGCCGAACTGGAAGCAATTGCAGCATGCGTGATTGGCGGCACCAGCCTGGCTGGCGGTGTGGGAAGCGTTGCCGGAg                                                                         <  2:513427/139‑1 (MQ=255)

                                                            aGCCATCGCCGGATTAATCCTTAGTTCTCGACTTGGCGCTGGTTCACCTTCTGCGGGAAATATCGCCGAACTGGAAGCAATTGCAGCATGCGTGATTGGCGGCACCAGCCTGGCTGGCGGTGTGGGAAGCGTTGCCGGAg                                                                         <  1:322699/140‑1 (MQ=255)

                                                             gCCATCGCCGGATTAATCCTTAGTTCTCGACTTGGCGCTGGTTCACCTTCTGCGGGAAATATCGCCGAACTGGAAGCAATTGCAGCATGCGTGATTGGCGGCACCAGCCTGGCTGGCGGTGTGGGAAGCGTTGCCGGGGc                                                                        >  2:1694963/1‑140 (MQ=255)

                                                             gCCATCGCCGGATTAATCCTTAGTTCTCGACTTGGCGCTGGTTCACCTTCTGCGGGAAATATCGCCGAACTGGAAGCAATTGCAGCATGCGTGATTGGCGGCACCAGCCTGGCTGGCGGTGTGGGAAGCGTTGCCGGAGc                                                                        <  2:1666170/140‑1 (MQ=255)

                                                             gCCATCGCCGGATTAATCCTTAGTTCTCGACTTGGCGCTGGTTCACCTTCTGCGGGAAATATCGCCGAACTGGAAGCAATTGCAGCATGCGTGATTGGCGGCACCAGCCTGGCTGGCGGTGTGGGAAGCGTTGCCGGAGc                                                                        >  2:1589244/1‑140 (MQ=255)

                                                             gCCATCGCCGGATTAATCCTTAGTTCTCGACTTGGCGCTGGTTCACCTTCTGCGGGAAATATCGCCGAACTGGAAGCAATTGCAGCATGCGTGATTGGCGGCACCAGCCTGGCTGGCGGTGTGGGAAGCGTTGCCGGAGc                                                                        >  2:81657/1‑140 (MQ=255)

                                                             gCCATCGCCGGATTAATCCTTAGTTCTCGACTTGGCGCTGGTTCACCTTCTGCGGGAAATATCGCCGAACTGGAAGCAATTGCAGCATGCGTGATTGGCGGCACCAGCCTGGCTGGCGGTGTGGGAAGCGTTGCCGGAGc                                                                        >  2:1551648/1‑140 (MQ=255)

                                                              ccATCGCCGGATTAATCCTTAGTTCTCGACTTGGCGCTGGTTCACCTTCTGCGGGAAATATCGCCGAACTGGAAGCAATTGCAGCATGCGTGATTGGCGGCACCAGCCTGGCTGGCGGTGTGGGAAGCGTTGCCGGAGCa                                                                       <  1:2019608/140‑1 (MQ=255)

                                                                aTCGCCGGATTAATCCTTAGTTCTCGACTTGGCGCTGGTTCACCTTCTGCGGGAAATATCGCCGAACTGGAAGCAATTGCAGCATGCGTGATTGGCGGCACCAGCCTGGCTGGCGGTGTGGGAAGCGTTGCCGGAGCAGt                                                                     <  2:1051141/140‑1 (MQ=255)

                                                                 tCGCCGGATTAATCCTTAGTTCTCGACTTGGCGCTGGTTCACCTTCTGCGGGAAATATCGCCGAACTGGAAGCAATTGCAGCATGCGTGATTGGCGGCACCAGCCTGGCTGGCGGTGTGGGAAGCGTTGCCGGAGCAGTa                                                                    >  1:864540/1‑140 (MQ=255)

                                                                 tCGCCGGATTAATCCTTAGTTCTCGACTTGGCGCTGGTTCACCTTCTGCGGGAAATATCGCCGAACTGGAAGCAATTGCAGCATGCGTGATTGGCGGCACCAGCCTGGCTGGCGGTGTGGGAAGCGTTGCCGGAGCAGTa                                                                    >  2:65117/1‑140 (MQ=255)

                                                                 tCGCCGGATTAATCCTTAGTTCTCGACTTGGCGCTGGTTCACCTTCTGCGGGAAATATCGCCGAACTGGAAGCAATTGCAGCATGCGTGATTGGCGGCACCAGCCTGGCTGGCGGTGTGGGAAGCGTTGCCGGAGCAGTa                                                                    >  1:1530290/1‑140 (MQ=255)

                                                                  cGCCGGATTAATCCTTAGTTCTCGACTTGGCGCTGGTTCACCTTCTGCGGGAAATATCGCCGAACTGGAAGCAATTGCAGCATGCGTGATTGGCGGCACCAGCCTGGCTGGCGGTGTGGGAAGCGTTGCCGGAGCAGTaa                                                                   >  1:1274288/1‑140 (MQ=255)

                                                                   gCCGGATTAATCCTTAGTTCTCGACTTGGCGCTGGTTCACCTTCTGCGGGAAATATCGCCGAACTGGAAGCAATTGCAGCATGCGTGATTGGCGGCACCAGCCTGGCTGGCGGTGTGGGAAGCGTTGCCGGAGCAGTAAt                                                                  <  2:1394561/140‑1 (MQ=255)

                                                                     cGGATTAATCCTTAGTTCTCGACTTGGCGCTGGTTCACCTTCTGCGGGAAATATCGCCGAACTGGAAGCAATTGCAGCATGCGTGATTGGCGGCACCAGCCTGGCTGGCGGTGTGGGAAGCGTTGCCGGAGCAGTAATgg                                                                <  2:220590/140‑1 (MQ=255)

                                                                        aTTAATCCTTAGTTCTCGACTTGGCGCTGGTTCACCTTCTGCGGGAAATATCGCCGAACTGGAAGCAATTGCAGCATGCGTGATTGGCGGCACCAGCCTGGCTGGCGGTGTGGGAAGCGTTGCCGGAGCAGTAATggggg                                                             >  1:858301/1‑140 (MQ=255)

                                                                        aTTAATCCTTAGTTCTCGACTTGGCGCTGGTTCACCTTCTGCGGGAAATATCGCCGAACTGGAAGCAATTGCAGCATGCGTGATTGGCGGCACCAGCCTGGCTGGCGGTGTGGGAAGCGTTGCCGGAGCAGTAATggggg                                                             <  1:2040762/140‑1 (MQ=255)

                                                                          tAATCCTTAGTTCTCGACTTGGCGCTGGTTCACCTTCTGCGGGAAATATCGCCGAACTGGAAGCAATTGCAGCATGCGTGATTGGCGGCACCAGCCTGGCTGGCGGTGTGGGAAGCGTTGCCGGAGCAGTAATGGGGGCa                                                           <  2:1563776/140‑1 (MQ=255)

                                                                               cTTAGTTCTCGACTTGGCGCTGGTTCACCTTCTGCGGGAAATATCGCCGAACTGGAAGCAATTGCAGCATGCGTGATTGGCGGCACCAGCCTGGCTGGCGGTGTGGGAAGCGTTGCCGGAGCAGTAATGGGGGCATTTAt                                                      >  2:1535272/1‑140 (MQ=255)

                                                                                ttAGTTCTCGACTTGGCGCTGGTTCACCTTCTGCGGGAAATATCGCCGAACTGGAAGCAATTGCAGCATGCGTGATTGGCGGCACCAGCCTGGCTGGCGGTGTGGGAAGCGTTGCCGGAGCAGTAATGGGGGCATTTATc                                                     <  2:1896436/140‑1 (MQ=255)

                                                                                ttAGTTCTCGACTTGGCGCTGGTTCACCTTCTGCGGGAAATATCGCCGAACTGGAAGCAATTGCAGCATGCGTGATTGGCGGCACCAGCCTGGCTGGCGGTGTGGGAAGCGTTGCCGGAGCAGTAATGGGGGCATTTATc                                                     <  1:1512842/140‑1 (MQ=255)

                                                                                 tAGTTCTCGACTTGGCGCTGGTTCACCTTCTGCGGGAAATATCGCCGAACTGGAAGCAATTGCAGCATGCGTGATTGGCGGCACCAGCCTGGCTGGCGGTGTGGGAAGCGTTGCCGGAGCAGTAATGGGGGCATTTATCa                                                    >  2:1306628/1‑140 (MQ=255)

                                                                                  aGTTCTCGACTTGGCGCTGGTTCACCTTCTGCGGGAAATATCGCCGAACTGGAAGCAATTGCAGCATGCGTGATTGGCGGCACCAGCCTGGCTGGCGGTGTGGGAAGCGTTGCCGGAGCAGTAATGGGGGCATTTATCAt                                                   >  2:1626774/1‑140 (MQ=255)

                                                                                  aGTTCTCGACTTGGCGCTGGTTCACCTTCTGCGGGAAATATCGCCGAACTGGAAGCAATTGCAGCATGCGTGATTGGCGGCACCAGCCTGGCTGGCGGTGTGGGAAGCGTTGCCGGAGCAGTAATGGGGGCATTTATCAt                                                   >  2:1339557/1‑140 (MQ=255)

                                                                                  aGTTCTCGACTTGGCGCTGGTTCACCTTCTGCGGGAAATATCGCCGAACTGGAAGCAATTGCAGCATGCGTGATTGGCGGCACCAGCCTGGCTGGCGGTGTGGGAAGCGTTGCCGGAGCAGTAATGGGGGCATTTATCAt                                                   <  1:1493045/140‑1 (MQ=255)

                                                                                      ctcGACTTGGCGCTGGTTCACCTTCTGCGGGAAATATCGCCGAACTGGAAGCAATTGCAGCATGCGTGATTGGCGGCACCAGCCTGGCTGGCGGTGTGGGAAGCGTTGCCGGAGCAGTAATGGGGGCATTTATCATGGCt                                               >  2:623679/1‑140 (MQ=255)

                                                                                       tcGACTTGGCGCTGGTTCACCTTCTGCGGGAAATATCGCCGAACTGGAAGCAATTGCAGCATGCGTGATTGGCGGCACCAGCCTGGCTGGCGGTGTGGGAAGCGTTGCCGGAGCAGTAATGGGGGCATTTATCATGGCtt                                              <  1:1358979/140‑1 (MQ=255)

                                                                                       tcGACTTGGCGCTGGTTCACCTTCTGCGGGAAATATCGCCGAACTGGAAGCAATTGCAGCATGCGTGATTGGCGGCACCAGCCTGGCTGGCGGTGTGGGAAGCGTTGCCGGAGCAGTAATGGGGGCATTTATCATGGCtt                                              >  1:936764/1‑140 (MQ=255)

                                                                                       tcGACTTGGCGCTGGTTCACCTTCTGCGGGAAATATCGCCGAACTGGAAGCAATTGCAGCATGCATGATTGGCGGCACCAGCCTGGCTGGCGGTGTGGGAAGCGTTGCCGGAGCAGTAATGGGGGCATTTATCATGGCtt                                              <  2:404948/140‑1 (MQ=255)

                                                                                         gACTTGGCGCTGGTTCACCTTCTGCGGGAAATATCGCCGAACTGGAAGCAATTGCAGCATGCGTGATTGGCGGCACCAGCCTGGCTGGCGGTGTGGGAAGCGTTGCCGGAGCAGTAATGGGGGCATTTATCATGGCTTCa                                            <  1:1306628/140‑1 (MQ=255)

                                                                                              ggCGCTGGTTCACCTTCTGCGGGAAATATCGCCGAACTGGAAGCAATTGCAGCATGCGTGATTGGCGGCACCAGCCTGGCTGGCGGTGTGGGAAGCGTTGCCGGAGCAGTAATGGGGGCATTTATCATgg                                                 <  2:2021873/130‑1 (MQ=255)

                                                                                              ggCGCTGGTTCACCTTCTGCGGGAAATATCGCCGAACTGGAAGCAATTGCAGCATGCGTGATTGGCGGCACCAGCCTGGCTGGCGGTGTGGGAAGCGTTGCCGGAGCAGTAATGGGGGCATTTATCATGGCTTCACTGGa                                       >  1:668766/1‑140 (MQ=255)

                                                                                                 gcTGGTTCACCTTCTGCGGGAAATATCGCCGAACTGGAAGCAATTGCAGCATGCGTGATTGGCGGCACCAGCCTGGCTGGCGGTGTGGGAAGCGTTGCCGGAGCAGTAATGGGGGCATTTATCATGGCTTCACTGGATaa                                    <  2:833573/140‑1 (MQ=255)

                                                                                                 gcTGGTTCACCTTCTGCGGGAAATATCGCCGAACTGGAAGCAATTGCAGCATGCGTGATTGGCGGCACCAGCCTGGCTGGCGGTGTGGGAAGCGTTGCCGGAGCAGTAATGGGGGCATTTATCATGGCTTCACTGGATaa                                    <  2:1131541/140‑1 (MQ=255)

                                                                                                 gcTGGTTCACCTTCTGCGGGAAATATCGCCGAACTGGAAGCAATTGCAGCATGCGTGATTGGCGGCACCAGCCTGGCTGGCGGTGTGGGAAGCGTTGCCGGAGCAGTAATGGGGGCATTTATCATGGCTTCACTGGATaa                                    <  1:1535272/140‑1 (MQ=255)

                                                                                                     gTTCACCTTCTGCGGGAAATATCGCCGAACTGGAAGCAATTGCAGCATGCGTGATTGGCGGCACCAGCCTGGCTGGCGGTGTGGGAAGCGTTGCCGGAGCAGTAATGGGGGCATTTATCATGGCTTCACTGGATAACggt                                <  1:1925994/140‑2 (MQ=255)

                                                                                                     gTTCACCTTCTGCGGGAAATATCGCCGAACTGGAAGCAATTGCAGCATGCGTGATTGGCGGCACCAGCCTGGCTGGCGGTGTGGGAAGCGTTGCCGGAGCAGTAATGGGGGCATTTATCATGGCTTCACTGGATAACGGc                                >  1:1042455/1‑140 (MQ=255)

                                                                                                     gTTCACCTTCTGCGGGAAATATCGCCGAACTGGAAGCAATTGCAGCATGCGTGATTGGCGGCACCAGCCTGGCTGGCGGTGTGGGAAGCGTTGCCGGAGCAGTAATGGGGGCATTTATCATGGCTTCACTGGATAACGGc                                <  2:417765/140‑1 (MQ=255)

                                                                                                     gTTCACCTTCTGCGGGAAATATCGCCGAACTGGAAGCAATTGCAGCATGCGTGATTGGCGGCACCAGCCTGGCTGGCGGTGTGGGAAGCGTTGCCGGAGCAGTAATGGGGGCATTTATCATGGCTTCACTGGATAACGGc                                <  1:1351886/140‑1 (MQ=255)

                                                                                                     gTTCACCTTCTGCGGGAAATATCGCCGAACTGGAAGCAATTGCAGCATGCGTGATTGGCGGCACCAGCCTGGCTGGCGGTGTGGGAAGCGTTGCCGGAGCAGTAATGGGGGCATTTATCATGGCTTCACTGGATAACGGc                                <  2:44498/140‑1 (MQ=255)

                                                                                                     gTTCACCTTCTGCGGGAAATATCGCCGAACTGGAAGCAATTGCAGCATGCGTGATTGGCGGCACCAGCCTGGCTGGCGGTGTGGGAAGCGTTGCCGGAGCAGTAATGGGGGCATTTATCATGGCTTCACTGGATAACGGc                                <  1:1687767/140‑1 (MQ=255)

                                                                                                     gTTCACCTTCTGCGGGAAATATCGCCGAACTGGAAGCAATTGCAGCATGCGTGATTGGCGGCACCAGCCTGGCTGGCGGTGTGGGAAGCGTTGCCGGAGCAGTAATGGGGGCATTTATCATGGCTTCACTGGATAACGGc                                <  1:1551648/140‑1 (MQ=255)

                                                                                                     gTTCACCTTCTGCGGGAAATATCGCCGAACTGGAAGCAATTGCAGCATGCGTGATTGGCGGCACCAGCCTGGCTGGCGGTGTGGGAAGCGTTGCCGGAGCAGTAATGGGGGCATTTATCATGGCTTCACTGGATAACGGc                                >  1:1056862/1‑140 (MQ=255)

                                                                                                      ttCACCTTCTGCGGGAAATATCGCCGAACTGGAAGCAATTGCAGCATGCGTGATTGGCGGCGCCTGCCTGGCTGGCGGTGTGGGAAGTGTTGGGGGAGCAGTAAGGGGGGGATTTATTATGTCTTCACGGGATGACGGCa                               <  2:797090/140‑1 (MQ=255)

                                                                                                      ttCACCTTCTGCGGGAAATATCGCCGAACTGGAAGCAATTGCAGCATGCGTGATTGGCGGCACCAGCCTGGCTGGCGGTGTGGGAAGCGTTGCCGGAGCAGTAATGGGGGCATTTATCATGGCTTCACTGGATAACGGCa                               <  1:2010176/140‑1 (MQ=255)

                                                                                                       tCACCTTCTGCGGGAAATATCGCCGAACTGGAAGCAATTGCAGCATGCGTGATTGGCGGCACCAGCCTGGCTGGCGGTGTGGGAAGCGTTGCCGGAGCAGTAATGGGGGCATTTATCATGGCTTCACTGGATAACGGCAt                              <  1:746889/140‑1 (MQ=255)

                                                                                                       tCACCTTCTGCGGGAAATATCGCCGAACTGGAAGCAATTGCAGCATGCGTGATTGGCGGCACCAGCCTGGCTGGCGGTGTGGGAAGCGTTGCCGGAGCAGTAATGGGGGCATTTATCATGGCTTCACTGGATAACGGCAt                              <  2:1272675/140‑1 (MQ=255)

                                                                                                       tCACCTTCTGCGGGAAATATCGCCGAACTGGAAGCAATTGCAGCATGCGTGATTGGCGGCACCAGCCTGGCTGGCGGTGTGGGAAGCGTTGCCGGAGCAGTAATGGGGGCATTTATCATGGCTTCACTGGATAACGGCAt                              <  1:1339557/140‑1 (MQ=255)

                                                                                                        cACCTTCTGCGGGAAATATCGCCGAACTGGAAGCAATTGCAGCATGCGTGATTGGCGGCACCAGCCTGGCTGGCGGTGTGGGAAGCGTTGCCGGAGCAGTAATGGGGGCATTTATCATGGCTTCACTGGATAACGGCATg                             <  2:1042455/140‑1 (MQ=255)

                                                                                                         aCCTTCTGCGGGAAATATCGCCGAACTGGAAGCAATTGCAGCATGCGTGATTGGCGGCACCAGCCTGGCTGGCGGTGTGGGAAGCGTTGCCGGAGCAGTAATGGGGGCATTTATCATGGCTTCACTGGATAACGGCATGa                            <  2:891051/140‑1 (MQ=255)

                                                                                                          ccTTCTGCGGGAAATATCGCCGAACTGGAAGCAATTGCAGCATGCGTGATTGGCGGCACCAGCCTGGCTGGCGGTGTGGGAAGCGTTGCCGGAGCAGTAATGGGGGCATTTATCATGGCTTCACTGGATAACGGCATGAg                           <  2:1353941/140‑1 (MQ=255)

                                                                                                          ccTTCTGCGGGAAATATCGCCGAACTGGAAGCAATTGCAGCATGCGTGATTGGCGGCACCAGCCTGGCTGGCGGTGTGGGAAGCGTTGCCGGAGCAGTAATGGGGGCATTTATCATGGCTTCACTGGATAACGGCATGAg                           <  2:608096/140‑1 (MQ=255)

                                                                                                             tCTGCGGGAAATATCGCCGAACTGGAAGCAATTGCAGCATGCGTGATTGGCGGCACCAGCCTGGCTGGCGGTGTGGGAAGCGTTGCCGGAGCAGTAATGGGGGCATTTATCATGGCTTCACTGGATAACGGCATGAGTat                        <  2:767308/140‑1 (MQ=255)

                                                                                                               tGCGGGAAATATCGCCGAACTGGAAGCAATTGCAGCATGCGTGATTGGCGGCACCAGCCTGGCTGGCGGTGTGGGAAGCGTTGCCGGAGCAGTAATGGGGGCATTTATCATGGCTTCACTGGATAACGGCATGAGTatga                      >  1:303140/1‑140 (MQ=255)

                                                                                                               tGCGGGAAATATCGCCGAACTGGAAGCAATTGCAGCATGCGTGATTGGCGGCACCAGCCTGGCTGGCGGTGTGGGAAGCGTTGCCGGAGCAGTAATGGGGGCATTTATCATGGCTTCACTGGATAACGGCATGAGTatga                      >  1:1057965/1‑140 (MQ=255)

                                                                                                               tGCGGGAAATATCGCCGAACTGGAAGCAATTGCAGCATGCGTGATTGGCGGCACCAGCCTGGCTGGCGGTGTGGGAAGCGTTGCCGGAGCAGTAATGGGGGCATTTATCATGGCTTCACTGGATAACGGCATGAGTatga                      >  2:1312089/1‑140 (MQ=255)

                                                                                                               tGCGGGAAATATCGCCGAACTGGAAGCAATTGCAGCATGCGTGATTGGCGGCACCAGCCTGGCTGGCGGTGTGGGAAGCGTTGCCGGAGCAGTAATGGGGGCATTTATCATGGCTTCACTGGATAACGGCATGAGTatga                      >  1:738438/1‑140 (MQ=255)

                                                                                                               tGCGGGAAATATCGCCGAACTGGAAGCAATTGCAGCATGCGTGATTGGCGGCACCAGCCTGGCTGGCGGTGTGGGAAGCGTTGCCGGAGCAGTAATGGGGGCATTTATCATGGCTTCACTGGATAACGGCATGAGGatga                      >  2:1816098/1‑140 (MQ=255)

                                                                                                                        tatCGCCGAACTGGAAGCAATTGCAGCATGCGTGATTGGCGGCACCAGCCTGGCTGGCGGTGTGGGAAGCGTTGCCGGAGCAGTAATGGGGGCATTTATCATGGCTTCACTGGATAACGGCATGAGTATGATGGATGTAc             <  2:564908/140‑1 (MQ=255)

                                                                                                                         atCGCCGAACTGGAAGCAATTGCAGCATGCGTGATTGGCGGCACCAGCCTGGCTGGCGGTGTGGGAAGCGTTGCCGGAGCAGTAATGGGGGCATTTATCATGGCTTCACTGGATAACGGCATGAGTATGATGGATGTAcc            <  1:284617/140‑1 (MQ=255)

                                                                                                                         atCGCCGAACTGGAAGCAATTGCAGCATGCGTGATTGGCGGCACCAGCCTGGCTGGCGGTGTGGGAAGCGTTGCCGGAGCAGTAATGGGGGCATTTATCATGGCTTCACTGGATAACGGCATGAGTATGATGGATGTAcc            >  1:1759351/1‑140 (MQ=255)

                                                                                                                           cGCCGAACTGGAAGCAATTGCAGCATGCGTGATTGGCGGCACCAGCCTGGCTGGCGGTGTGGGAAGCGTTGCCGGAGCAGTAATGGGGGCATTTATCATGGCTTCACTGGATAACGGCATGAGTATGATGGATGTACCGa          <  2:1362141/140‑1 (MQ=255)

                                                                                                                             ccGAACTGGAAGCAATTGCAGCATGCGTGATTGGCGGCACCAGCCTGGCTGGCGGTGTGGGAAGCGTTGCCGGAGCAGTAATGGGGGCATTTATCATGGCTTCACTGGATAACGGCATGAGTATGATGGATGTACCGAcc        >  2:1671770/1‑140 (MQ=255)

                                                                                                                              cGAACTGGAAGCAATTGCAGCATGCGTGATTGGCGGCACCCGCCTGGCTGGCGGGGTGGGAAGCGGTGCCCGAGCAGGAATGGGGGCAATTATCATGGCTTCACTGGATCACGGCCTGAGTATGATGGATGTACCGACCt       >  2:1479824/1‑140 (MQ=255)

                                                                                                                                aaCTGGAAGCAATTGCAGCATGCGTGATTGGCGGCACCAGCCTGGCTGGCGGTGTGGGAAGCGTTGCCGGAGCAGTAATGGGGGCATTTATCATGGCTTCACTGGATAACGGCATGAGTATGATGGATGTACCGACCtac     <  1:1809478/140‑3 (MQ=255)

                                                                                                                                aaCTGGAAGCAATTGCAGCATGCGTGATTGGCGGCACCAGCCTGGCTGGCGGTGTGGGAAGCGTTGCCGGAGCAGTAATGGGGGCATTTATCATGGCTTCACTGGATAACGGCATGAGTATGATGGATGTACCGACCTTc     <  2:1921597/140‑1 (MQ=255)

                                                                                                                                 aCTGGAAGCAATTGCAGCATGCGTGATTGGCGGCACCAGCCTGGCTGGCGGTGTGGGAAGCGTTGCCGGAGCAGTAATGGGGGCATTTATCATGGCTTCACTGGATAACGGCATGAGTATGATGGATGTACCGACCTTCt    <  1:377463/140‑1 (MQ=255)

                                                                                                                                   tGGAAGCAATTGCAGCATGCGTGATTGGCGGCACCAGCCTGGCTGGCGGTGTGGGAAGCGTTGCCGGAGCAGTAATGGGGGCATTTATCATGGCTTCACTGGATAACGGCATGAGTATGATGGATGTACCGACCTTCTgg  <  2:1793468/140‑1 (MQ=255)

                                                                                                                                   tGGAAGCAATTGCAGCATGCGTGATTGGCGGCACCAGCCTGGCTGGCGGTGTGGGAAGCGTTGCCGGAGCAGTAATGGGGGCATTTATCATGGCTTCACTGGATAACGGCATGAGTATGATGGATGTACCGACCTTCTgg  <  1:655536/140‑1 (MQ=255)

                                                                                                                                   tGGAAGCAATTGCAGCATGCGTGATTGGCGGCACCAGCCTGGCTGGCGGTGTGGGAAGCGTTGCCGGAGCAGTAATGGGGGCATTTATCATGGCTTCACTGGATAACGGCATGAGTATGATGGATGTACCGACCTTCTgg  <  1:1589244/140‑1 (MQ=255)

                                                                                                                                   tGGAAGCAATTGCAGCATGCGTGATTGGCGGCACCAGCCTGGCTGGCGGTGTGGGAAGCGTTGCCGGAGCAGTAATGGGGGCATTTATCATGGCTTCACTGGATAACGGCATGAGTATGATGGATGTACCGACCTTCTgg  <  1:1671770/140‑1 (MQ=255)

                                                                                                                                   tGGAAGCAATTGCAGCATGCGTGATTGGCGGCACCAGCCTGGCTGGCGGTGTGGGAAGCGTTGCCGGAGCAGTAATGGGGGCATTTATCATGGCTTCACTGGATAACGGCATGAGTATGATGGATGTACCGACCTTCTgg  <  2:303140/140‑1 (MQ=255)

CTCCGGGATTAACGTTGAACGCACCAAACTTGCCGTGTTCGCGATTAACGGATTAATGGTAGCCATCGCCGGATTAATCCTTAGTTCTCGACTTGGCGCTGGTTCACCTTCTGCGGGAAATATCGCCGAACTGGACGCAATTGCAGCATGCGTGATTGGCGGCACCAGCCTGGCTGGCGGTGTGGGAAGCGTTGCCGGAGCAGTAATGGGGGCATTTATCATGGCTTCACTGGATAACGGCATGAGTATGATGGATGTACCGACCTTCTGG  >  NC_000913/3734559‑3734829

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`