BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 412086	105 (0.860)	3 (0.020)	3/276	8.9	2.8%	coding (396/1185 nt)	araJ	putative transport protein AraJ
*	?	NC_000913	412090 =	107 (0.890)	3 (0.020)	3/276	8.9	2.8%	coding (392/1185 nt)	araJ	putative transport protein AraJ
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 108 total aligned reads displayed.

CCCAAAAATAGACCGATGCCATCACCGCAATATTAAAAACAGCGATCAATAAAAAGGTGTAACGCCAGCTAAATTCCTGACTTAAATACGTTCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAACCATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCTCCGACGCCAAAAAATGCGCCATGCGGAAAGCCGGATACCAGCCGACCAATGGCGAGCATCAGGTAAGACGAAGAGAGCG  >  NC_000913/411950‑412225

cccAAAAATAGACCGATGCCATCACCGCAATATTAAAAACAGCGATCAATAAAAAGGTGTAACGCCAGCTAAATTCCTGACTTAAATACGTTCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAACCATc                                                                                                                                          >  2:1297118/1‑140 (MQ=255)

 ccAAAAATAGACCGATGCCATCACCGCAATATTAAAAACAGCGATCAATAAAAAGGTGTAACGCCAGCTAAATTCCTGACTTAAATACGTTCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAACCATcc                                                                                                                                         >  1:169300/1‑140 (MQ=255)

   aaaaaTAGACCGATGCCATCACCGCAATATTAAAAACAGCGATCAATAAAAAGGTGTAACGCCAGCTAAATTCCTGACTTAAATACGTTCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAACCATcccc                                                                                                                                       >  2:185142/1‑140 (MQ=255)

         accccGATGCCATCCCCGAAATATTAAAAACAGCAACAAAAAAAAAGGTGTAACCCCAGCAAAATCCCTGACTAAAATCCGTCCCCAGCGAAATCCCCAGCAAATTGGCGACTGTCACCCCGGAAACCACCCCCGCCAcg                                                                                                                                 <  2:1282793/137‑1 (MQ=255)

           aCCGATGCCATCACCGCAATATTAAAAACAGCGATCAATAAAAAGGTGTAACGCCAGCTAAATTCCTGACTTAAATACGTTCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAACCATCCCCGCCAcggc                                                                                                                               >  1:154372/1‑140 (MQ=255)

           aCCGATGCCATCACCGCAATATTAAAAACAGCGATCAATAAAAAGGTGTAACGCCAGCTAAATTCCTGACTTAAATACGTTCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAACCATCCCCGCCAcggc                                                                                                                               >  2:1030256/1‑140 (MQ=255)

           aCCGATGCCATCACCGCAATATTAAAAACAGCGATCAATAAAAAGGTGTAACGCCAGCTAAATTCCTGACTTAAATACGTTCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAACCATCCCCGCCAcggc                                                                                                                               >  2:1376302/1‑140 (MQ=255)

           aCCGATGCCATCACCGCAATATTAAAAACAGCGATCAATAAAAAGGTGTAACGCCAGCTAAATTCCTGACTTAAATACGTTCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAACCATCCCCGCCAcggc                                                                                                                               >  2:1670162/1‑140 (MQ=255)

               aTGCCATCACCGCAATATTAAAAACAGCGATCAATAAAAAGGTGTAACGCCAGCTAAATTCCTGACTTAAATACGTTCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAACCATCCCCGCCAcggcggcg                                                                                                                           >  1:68100/1‑140 (MQ=255)

               aTGCCATCACCGCAATATTAAAAACAGCGATCAATAAAAAGGTGTAACGCCAGCTAAATTCCTGACTTAAATACGTTCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAACCATCCCCGCCAcggcggcg                                                                                                                           >  2:1327631/1‑140 (MQ=255)

               aTGCCATCACCGCAATATTAAAAACAGCGATCAATAAAAAGGTGTAACGCCAGCTAAATTCCTGACTTAAATACGTTCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAACCATCCCCGCCAcggcggcg                                                                                                                           >  1:2032383/1‑140 (MQ=255)

                tGCCATCACCGCAATATTAAAAACAGCGATCAATAAAAAGGTGTAACGCCAGCTAAATTCCTGACTTAAATACGTTCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAACCATCCCCGCCAcggcggcgg                                                                                                                          >  1:1734834/1‑140 (MQ=255)

                 gCCATCACCGCAATATTAAAAACAGCGATCAATAAAAAGGTGTAACGCCAGCTAAATTCCTGACTTAAATACGTTCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAACCATCCCCGCCACGGCGGCGGt                                                                                                                         >  2:1211166/1‑140 (MQ=255)

                     tCACCGCAATATTAAAAACAGCGATCAATAAAAAGGTGTAACGCCAGCTAAATTCCTGACTTAAATACGTTCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAACCATCCCCGCCACGGCGGCGGTGACt                                                                                                                     >  2:591549/1‑140 (MQ=255)

                        ccGCAATATTAAAAACAGCGATCAATAAAAAGGTGTAACGCCAGCTAAATTCCTGACTTAAATACGTTCCCAGCGGAATGCCCAGAAAATTGGCGACTGTCATCCCGGAAACCATCCCCGCCACGGCGGCGGTGACtttt                                                                                                                  <  1:1258163/140‑1 (MQ=255)

                        ccGCAATATTAAAAACAGCGATCAATAAAAAGGTGTAACGCCAGCTAAATTCCTGACTTAAATACGTCCCCAGCGGAATGCCCAGCAAATTGGCGTCTGTCATCCCGGAAACCACCCCCGCCACGGCGGCGGTGACtttt                                                                                                                  <  2:580732/140‑1 (MQ=255)

                         cGCAATATTAAAAACAGCGATCAATAAAAAGGTGTAACGCCAGCTAAATTCCTGACTTAAATACGTTCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAACCATCCCCGCCACGGCGGCGGTGACTTTTc                                                                                                                 >  1:1687904/1‑140 (MQ=255)

                         cGCAATATTAAAAACAGCGATCAATAAAAAGGTGTAACGCCAGCTAAATTCCTGACTTAAATACGTTCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAACCATCCCCGCCACGGCGGCGGTGACTTTTc                                                                                                                 >  2:1209514/1‑140 (MQ=255)

                                 tAAAAACAGCGATCAATAAAAAGGTGTAACGCCAGCTAAATTCCTGACTTAAATACGTTCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAACCATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTg                                                                                                         >  1:1065883/1‑140 (MQ=255)

                                  aaaaaCAGCGATAAAAAAAAGGGTGTAACGCCAGCTAAATTCCTGATTAAAATACTTCCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCACCCCGAAACCCACCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGa                                                                                                        <  2:1508564/140‑1 (MQ=255)

                                   aaaaCAGCGATCAATAAAAAGGTGTAACGCCAGCTAAATTCCTGACTTAAATACGTTCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAACCATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGAt                                                                                                       >  2:1330527/1‑140 (MQ=255)

                                        aGCGATCAATAAAAAGGTGTAACGCCAGCTAAATTCCTGACTTAAATACGTTCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAACCATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAAttt                                                                                                  >  1:1051916/1‑140 (MQ=255)

                                        aGCGATCAATAAAAAGGTGTAACGCCAGCTAAATTCCTGACTTAAATACGTTCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAACCATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAAttt                                                                                                  >  1:908918/1‑140 (MQ=255)

                                        aGCGATCAATAAAAAGGTGTAACGCCAGCTAAATTCCTGACTTAAATACGTTCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAACCATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAAttt                                                                                                  >  1:612272/1‑140 (MQ=255)

                                        aGCGATCAATAAAAAGGTGTAACGCCAGCTAAATTCCTGACTTAAATACGTTCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAACCATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAAttt                                                                                                  >  1:2000142/1‑140 (MQ=255)

                                        aGCGATCAATAAAAAGGTGTAACGCCAGCTAAATTCCTGACTTAAATACGTTCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAACCATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAAttt                                                                                                  >  1:1943101/1‑140 (MQ=255)

                                        aGCGATCAATAAAAAGGTGTAACGCCAGCTAAATTCCTGACTTAAATACGTTCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAAC‑‑‑CCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTg                                                                                               >  1:1258570/1‑140 (MQ=255)

                                          ggATCAAAAAAAGGGTAAACCGCCAGCTAAGTTCCTAACTTAAATGCTTCCCCAGCGGAACCCCGAGAAAATGGGCGTCTGTCTTCCGGAAACCCCCCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAAttttt                                                                                                <  2:307885/139‑1 (MQ=255)

                                          gaataaaTAAAAAGGTGAACCGCCAGAAAATTTCCTATTTTAAGTGCATACCCAGCGGATTACCGAGAAAATTGGCGACTGTCCCCCCGAAACCCAGCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAAttttt                                                                                                <  2:1149240/135‑1 (MQ=255)

                                          cGATCAATAAAAAGGTGTAACGCCAGCTAAATTCCTGACTTAAATACGTTCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAACCATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAAttttt                                                                                                >  2:1985348/1‑140 (MQ=255)

                                          cGATCAATAAAAAGGTGTAACGCCAGCTAAATTCCTGACTTAAATACGTTCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAACCATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAAttttt                                                                                                >  2:2006248/1‑140 (MQ=255)

                                          cGATCAATAAAAAGGTGTAACGCCAGCTAAATTCCTGACTTAAATACGTTCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAACCATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAAttttt                                                                                                >  2:179663/1‑140 (MQ=255)

                                          cGATCAATAAAAAGGTGTAACGCCAGCTAAATTCCTGACTTAAATACGTTCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAACCATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAAttttt                                                                                                >  1:1270544/1‑140 (MQ=255)

                                          cGATCAATAAAAAGGTGTAACGCCAGCTAAATTCCTGACTTAAATACGTTCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAACCATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAAttttt                                                                                                >  1:1508564/1‑140 (MQ=255)

                                           gATCAATAAAAAGGTGTAACGCCAGCTAAATTCCTGACTTAAATACGTTCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAACCATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTg                                                                                               >  1:1401714/1‑140 (MQ=255)

                                                    aaaGGTGTAACGCCAGCTAAATTCCTGACTTAAATACGTTCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAACCATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATAACACGa                                                                                      >  1:654693/1‑140 (MQ=255)

                                                       ggTGTAACGCCAGCTAAATTCCTGACTTAAATACGTTCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAACCATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATAACACGATCg                                                                                   >  2:794571/1‑140 (MQ=255)

                                                         tgtAACGCCAGCTAAATTCCTGACTTAAATACGTTCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAACCATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCt                                                                                 >  1:1427895/1‑140 (MQ=255)

                                                         tgtAACGCCAGCTAAATTCCTGACTTAAATACGTTCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAACCATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCt                                                                                 >  2:2039563/1‑140 (MQ=255)

                                                         tgtAACGCCAGCTAAATTCCTGACTTAAATACGTTCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAACCATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCt                                                                                 >  1:1524973/1‑140 (MQ=255)

                                                         tgtAACGCCAGCTAAATTCCTGACTTAAATACGTTCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAACCATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCt                                                                                 >  1:979511/1‑140 (MQ=255)

                                                         tgtAACGCCAGCTAAATTCCTGACTTAAATACGTTCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAACCATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCt                                                                                 >  2:1930808/1‑140 (MQ=255)

                                                          gtAACGCCAGCTAAATTCCTGACTTAAATACGTTCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAACCATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCTc                                                                                >  1:711153/1‑140 (MQ=255)

                                                           tAACGCCAGCTAAATTCCTGACTTAAATACGTTCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAACCATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCTcc                                                                               >  2:706427/1‑140 (MQ=255)

                                                           tAACGCCAGCTAAATTCCTGACTTAAATACGTTCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAACCATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCTcc                                                                               >  1:482671/1‑140 (MQ=255)

                                                           tAACGCCAGCTAAATTCCTGACTTAAATACGTTCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAACCATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCTcc                                                                               >  1:17311/1‑140 (MQ=255)

                                                            accGCCAGCTAAATTCCTGATTAAAATCCGTCCCCAGCGGAATCCCCAGAAAATGGGCGACTGCCGCCCCGAAAACCACCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCTCCg                                                                              <  2:17311/138‑1 (MQ=255)

                                                                  aGCTAAATTCCTGACTTAAATACGTTCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAACCATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCTCCGACGCCa                                                                        >  1:1207633/1‑140 (MQ=255)

                                                                  aGCTAAATTCCTGACTTAAATACGTTCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAACCATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCTCCGACGCCa                                                                        >  2:1849007/1‑140 (MQ=255)

                                                                   gCTAAATTCCTGACTTAAATACGTTCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAACCATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCTCCGACGCCaa                                                                       >  2:1653408/1‑140 (MQ=255)

                                                                   gCTAAATTCCTGACTTAAATACGTTCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAACCATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCTCCGACGCCaa                                                                       >  1:1329693/1‑140 (MQ=255)

                                                                          tCCTGACTTAAATACTTCCCCAGCGAAATGCCCAGCAAATTGGCGACTGTCACCCCGAAAACCACCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAA‑TTTTGATAACACGATCGCTCCGACGCCAAAAAATgcg                                                               <  1:1376302/140‑1 (MQ=255)

                                                                                   aaaTACGTTCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAACCATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCTCCGACGCCAAAAAATGCGCCATGCgg                                                       >  2:167366/1‑140 (MQ=255)

                                                                                   aaaTACGTTCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAACCATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCTCCGACGCCAAAAAATGCGCCATGCgg                                                       >  1:1590697/1‑140 (MQ=255)

                                                                                     atccGTTCCCAGCGAAATGCCAAGCAAATTGGCGACTGTCATCCCGGAAACCACCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCTCCGACGCCAAAAAATGCGCCATGCGGaa                                                     <  1:185142/137‑1 (MQ=255)

                                                                                     aTACGTCCCCAGCGGAATGCCCAGAAAATTGGCGACTGTCCCCCCGAAACCCACCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCTCCGACGCCAAAAAATGCGCCATGCGGaa                                                     <  2:482671/140‑1 (MQ=255)

                                                                                         gTTCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAACCATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCTCCGACGCCAAAAAATGCGCCATGCGGAAAGcc                                                 >  2:1563333/1‑140 (MQ=255)

                                                                                           tCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAACCATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCTCCGACGCCAAAAAATGCGCCATGCGGAAAGCCgg                                               >  1:1109299/1‑140 (MQ=255)

                                                                                           tCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAACCATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCTCCGACGCCAAAAAATGCGCCATGCGGAAAGCCgg                                               >  1:1876807/1‑140 (MQ=255)

                                                                                           tCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAACCATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCTCCGACGCCAAAAAATGCGCCATGCGGAAAGCCgg                                               >  2:2031482/1‑140 (MQ=255)

                                                                                           tCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAACCATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCTCCGACGCCAAAAAATGCGCCATGCGGAAAGCCgg                                               >  2:1428554/1‑140 (MQ=255)

                                                                                           tCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAACCACCCCCGCCACGGCGGCGGTGCCTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCTCCGACGCCAAAAAATGCGCCATGCGGAAAGCCgg                                               >  1:822270/1‑140 (MQ=255)

                                                                                             ccAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAACCATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCTCCGACGCCAAAAAATGCGCCATGCGGAAAGCCGGAt                                             >  1:1853970/1‑140 (MQ=255)

                                                                                             ccAGCGGAATCCCCAGCAAATTGGCGACTGTCACCCGGAAAACCACCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCTCCGACGCCAAAAAATGCGCCATGCGGAAAGCCGGAt                                             <  1:308874/140‑1 (MQ=255)

                                                                                              cAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAACCATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCTCCGACGCCAAAAAATGCGCCATGCGGAAAGCCGGATa                                            >  2:1018727/1‑140 (MQ=255)

                                                                                              cAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAACCATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCTCCGACGCCAAAAAATGCGCCATGCGGAAAGCCGGATa                                            >  1:1944649/1‑140 (MQ=255)

                                                                                               aGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAACCATCCCCGCCACGGCGGCGGTGGCTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCTCCGACGCCAAAAAATGCGCCATGCGGAAAGCCGGATAc                                           >  1:29283/1‑140 (MQ=255)

                                                                                               aGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAACCATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCTCCGACGCCAAAAAATGCGCCATGCGGAAAGCCGGATAc                                           >  2:437350/1‑140 (MQ=255)

                                                                                               aGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAACCATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCTCCGACGCCAAAAAATGCGCCATGCGGAAAGCCGGATAc                                           >  1:1193910/1‑140 (MQ=255)

                                                                                               aGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAAC‑‑‑CCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCTCCGACGCCAAAAAATGTGCCATGCGGAAAGCCGGATACCAg                                        <  2:1258570/140‑1 (MQ=255)

                                                                                                 cGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAACCATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCTCCGACGCCAAAAAATGCGCCATGCGGAAAGCCGGATACCa                                         >  1:133973/1‑140 (MQ=255)

                                                                                                  ggaacccccAGAAAATGGGCGACTTCCACCCCGAAACCCACCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCTCCGACGCCAAAAAATGCGCCATGCGGAAAGCCGGATACCAg                                        <  2:169300/134‑1 (MQ=255)

                                                                                                  ggAATGCCCAGCAAATGGGCGACTGTCATCCCGAAACCCATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCTCCGACGCCAAAAAATGCGCCATGCGGAAAGCCGGATACCAg                                        <  1:1503852/140‑1 (MQ=255)

                                                                                                   gAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAACCATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCTCCGACGCCAAAAAATGCGCCATGCGGAAAGCCGGATACCAGc                                       >  1:602707/1‑140 (MQ=255)

                                                                                                     aTGCCCAGCAAATTGGCGACTGTCATCCCGGAAACCATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCTCCGACGCCAAAAAATGCGCCATGCGGAAAGCCGGATACCAGCCg                                     >  2:776647/1‑140 (MQ=255)

                                                                                                      tGCCCAGCAAATTGGCGACTGTCATCCCGGAAACCATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCTCCGACGCCAAAAAATGCGCCATGCGGAAAGCCGGATACCAGCCGa                                    >  2:230335/1‑140 (MQ=255)

                                                                                                      tGCCCAGCAAATTGGCGACTGTCATCCCGGAAACCATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCTCCGACGCCAAAAAATGCGCCATGCGGAAAGCCGGATACCAGCCGa                                    >  2:1396803/1‑140 (MQ=255)

                                                                                                      tGCCCAGCAAATTGGCGACTGTCATCCCGGAAACCATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCTCCGACGCCAAAAAATGCGCCATGCGGAAAGCCGGATACCAGCCGa                                    >  1:331295/1‑140 (MQ=255)

                                                                                                         ccAGAAAATTGGCGACTGTCACCCGGAAAACCACCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCTCCGACGCCAAAAAATGCGCCATGCGGAAAGCCGGATACCAGCCGACCa                                 <  2:206315/140‑1 (MQ=255)

                                                                                                           aGCAAATTGGCGACTGTCATCCCGGAAACCATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCTCCGACGCCAAAAAATGCGCCATGCGGAAAGCCGGATACCAGCCGACCAAt                               >  1:1884390/1‑140 (MQ=255)

                                                                                                           aGCAAATTGGCGACTGTCATCCCGGAAACCATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCTCCGACGCCAAAAAATGCGCCATGCGGAAAGCCGGATACCAGCCGACCAAt                               >  1:654942/1‑140 (MQ=255)

                                                                                                           aGCAAATTGGCGACTGTCATCCCGGAAACCATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCTCCGACGCCAAAAAATGCGCCATGCGGAAAGCCGGATACCAGCCGACCAAt                               >  1:1818515/1‑140 (MQ=255)

                                                                                                           aGCAAATTGGCGACTGTCATCCCGGAAACCATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCTCCGACGCCAAAAAATGCGCCATGCGGAAAGCCGGATACCAGCCGACCAAt                               >  2:1616851/1‑140 (MQ=255)

                                                                                                              aaaTTGGCGACTGTCATCCCGGAAACCATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCTCCGACGCCAAAAAATGCGCCATGCGGAAAGCCGGATACCAGCCGACCAATGGc                            >  2:732102/1‑140 (MQ=255)

                                                                                                               aaTTGGCGACTGTCACCCCGAAACCCACCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCTCCGACGCCAAAAAATGCGCCATGCGGAAAGCCGGATACCAGCCGACCAATGGCg                           <  2:1300855/140‑1 (MQ=255)

                                                                                                               aaTGGGCGACTGTCCTCCCGAAACCCCCCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCTCCGACGCCAAAAAATGCGCCATGCGGAAAGCCGGATACCAGCCGACCAATGGCg                           <  2:2000142/140‑1 (MQ=255)

                                                                                                                  tGGCGACTGTCATCCCGGAAACCATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCTCCGACGCCAAAAAATGCGCCATGCGGAAAGCCGGATACCAGCCGACCAATGGCGAGc                        >  2:471415/1‑140 (MQ=255)

                                                                                                                   ggCGCCTGTCATCCCGAAAACCATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCTCCGACGCCAAAAAATGCGCCATGCGGAAAGCCGGATACCAGCCGACCAATGGCGAGCa                       <  2:60536/140‑1 (MQ=255)

                                                                                                                   ggCGACTGTCACCCAGAAAACCACCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCTCCGACGCCAAAAAATGCGCCATGCGGAAAGCCGGATACCAGCCGACCAATGGCGAGCa                       <  1:1467819/140‑1 (MQ=255)

                                                                                                                    gCGACTGTCATCCCGGAAACCATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCTCCGACGCCAAAAAATGCGCCATGCGGAAAGCCGGATACCAGCCGACCAATGGCGAGCAt                      >  1:1233606/1‑140 (MQ=255)

                                                                                                                         tGTCATCCCGGAAACCATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCTCCGACGCCAAAAAATGCGCCATGCGGAAAGCCGGATACCAGCCGACCAATGGCGAGCATCAGGt                 >  1:1928501/1‑140 (MQ=255)

                                                                                                                           tCATCCCGGAACCCACCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCTCCGACGCCAAAAAATGCGCCATGCGGAAAGCCGGATACCAGCCGACCAATGGCGAGCATCAGGTaa               <  2:1737679/140‑1 (MQ=255)

                                                                                                                              tCCCGGAAACCATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCTCCGACGCCAAAAAATGCGCCATGCGGAAAGCCGGATACCAGCCGACCAATGGCGAGCATCAGGTAAGAc            >  2:1553016/1‑140 (MQ=255)

                                                                                                                              tCCCGGAAACCATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCTCCGACGCCAAAAAATGCGCCATGCGGAAAGCCGGATACCAGCCGACCAATGGCGAGCATCAGGTAAGAc            >  1:68891/1‑140 (MQ=255)

                                                                                                                                   gAAACCATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCTCCGACGCCAAAAAATGCGCCATGCGGAAAGCCGGATACCAGCCGACCAATGGCGAGCATCAGGTAAGACGAaga       >  2:1974250/1‑140 (MQ=255)

                                                                                                                                   gAAACCATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCTCCGACGCCAAAAAATGCGCCATGCGGAAAGCCGGATACCAGCCGACCAATGGCGAGCATCAGGTAAGACGAaga       >  2:1641903/1‑140 (MQ=255)

                                                                                                                                   gAAACCATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCTCCGACGCC‑AAAAATGCGCCATGCGGAAAGCCGGATACCAGCCGACCAATGGCGAGCATCAGGTAAGACGAagag      >  2:279570/1‑140 (MQ=255)

                                                                                                                                     aaCCATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCTCCGACGCCAAAAAATGCGCCATGCGGAAAGCCGGATACCAGCCGACCAATGGCGAGCATCAGGTAAGACGAagaga     >  2:1470448/1‑140 (MQ=255)

                                                                                                                                      aCCATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCTCCGACGCCAAAAAATGCGCCATGCGGAAAGCCGGATACCAGCCGACCAATGGCGAGCATCAGGTAAGACGAagagag    <  2:654942/140‑1 (MQ=255)

                                                                                                                                        cATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCTCCGACGCCAAAAAATGCGCCATGCGGAAAGCCGGATACCAGCCGACCAATGGCGAGCATCAGGTAAGACGAAGAGAGCg  <  2:1818515/140‑1 (MQ=255)

CCCAAAAATAGACCGATGCCATCACCGCAATATTAAAAACAGCGATCAATAAAAAGGTGTAACGCCAGCTAAATTCCTGACTTAAATACGTTCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAACCATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCTCCGACGCCAAAAAATGCGCCATGCGGAAAGCCGGATACCAGCCGACCAATGGCGAGCATCAGGTAAGACGAAGAGAGCG  >  NC_000913/411950‑412225

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.