BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,365,279	C→A	S114S (TCG→TCT)	ais ←	putative lipopolysaccharide core heptose(II)‑phosphate phosphatase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,365,279	0	C	A	100.0%	477.3 / NA	132	S114S (TCG→TCT)	ais	putative lipopolysaccharide core heptose(II)‑phosphate phosphatase
Reads supporting (aligned to +/- strand): ref base C (0/0); new base A (56/76); total (56/76)

Only 100 of 134 total aligned reads displayed.

TGATTATGGGTGAAAATAACGATATTTTTATCAGGCGCTTTGCTTTGTAAGTCCTTAATTGCACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCT‑‑ACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCCGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATACCTGTTTTATCTGACAAGCATTGATT  >  NC_000913/2365142‑2365413

tGATTATGGGTGAAAATAACGATATTTTTATCAGGCGCTTTGCTTTGTAAGTCCTTAATTGCACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCT‑‑ACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCAGa                                                                                                                                      >  2:544502/1‑140 (MQ=255)

     aTGGGTGAAAATAACGATATTTTTATCAGGCGCTTTGCTTTGTAAGTCCTTAATTGCACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCT‑‑ACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCAGACTGaa                                                                                                                                 <  1:544502/140‑1 (MQ=255)

      tGGGTGAAAATAACGATATTTTTATCAGGCGCTTTGCTTTGTAAGTCCTTAATTGCACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCT‑‑ACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCAGACTGaa                                                                                                                                 <  1:1269040/139‑1 (MQ=255)

        ggTGAAAATAACGATATTTTTATCAGGCGCTTTGCTTTGTAAGTCCTTAATTGCACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCT‑‑ACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCAGACTGAATgg                                                                                                                              >  1:899109/1‑140 (MQ=255)

         gTGAAAATAACGATATTTTTATCAGGCGCTTTGCTTTGTAAGTCCTTAATTGCACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCT‑‑ACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCAGACTGAATGGt                                                                                                                             <  1:310096/140‑1 (MQ=255)

          tGAAAATAACGATATTTTTATCAGGCGCTTTGCTTTGTAAGTCCTTAATTGCACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCT‑‑ACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCAGACTGAATGGTc                                                                                                                            <  2:2023614/140‑1 (MQ=255)

            aaaaTAACGATATTTTTATCAGGCGCTTTGCTTTGTAAGTCCTTAATTGCACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCT‑‑ACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCAGACTGAATGGTCCg                                                                                                                          >  1:1685091/1‑140 (MQ=255)

            aaaaTAACGATATTTTTATCAGGCGCTTTGCTTTGTAAGTCCTTAATTGCACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCT‑‑ACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCAGACTGAATGGTCCg                                                                                                                          >  1:352170/1‑140 (MQ=255)

            aaaaTAACGATATTTTTATCAGGCGCTTTGCTTTGTAAGTCCTTAATTGCACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCT‑‑ACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCAGACTGAATGGTCCg                                                                                                                          <  1:47042/140‑1 (MQ=255)

            aaaaTAACGATATTTTTATCAGGCGCTTTGCTTTGTAAGTCCTTAATTGCACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCT‑‑ACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCAGACTGAATGGTCCg                                                                                                                          <  2:1651073/140‑1 (MQ=255)

             aaaTAACGATATTTTTATCAGGCGCTTTGCTTTGTAAGTCCTTAATTGCACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCT‑‑ACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCAGACTGAATGGTCCgg                                                                                                                         <  1:1072682/140‑1 (MQ=255)

             aaaTAACGATATTTTTATCAGGCGCTTTGCTTTGTAAGTCCTTAATTGCACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCT‑‑ACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCAGACTGAATGGTCCgg                                                                                                                         <  1:1936324/140‑1 (MQ=255)

              aaTAACGATATTTTTATCAGGCGCTTTGCTTTGTAAGTCCTTAATTGCACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCT‑‑ACCGTCAATTTTTTACCCGCTTAAAACCAGGTAGCAGACTGAATGGTCCGGa                                                                                                                        <  2:196782/140‑1 (MQ=255)

              aaTAACGATATTTTTATCAGGCGCTTTGCTTTGTAAGTCCTTAATTGCACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCT‑‑ACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCAGACTGAATGGTCCGGa                                                                                                                        <  1:127493/140‑1 (MQ=255)

              aaTAACGATATTTTTATCAGGCGCTTTGCTTTGTAAGTCCTTAATTGCACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCT‑‑ACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCAGACTGAATGGTCCGGa                                                                                                                        <  1:1073050/140‑1 (MQ=255)

              aaTAACGATATTTTTATCAGGCGCTTTGCTTTGTAAGTCCTTAATTGCACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCT‑‑ACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCAGACTGAATGGTCCGGa                                                                                                                        <  1:1796866/140‑1 (MQ=255)

               aTAACGATATTTTTATCAGGCGCTTTGCTTTGTAAGTCCTTAATTGCACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCT‑‑ACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCAGACTGAATGGTCCGGAc                                                                                                                       <  1:745812/140‑1 (MQ=255)

               aTAACGATATTTTTATCAGGCGCTTTGCTTTGTAAGTCCTTAATTGCACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCT‑‑ACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCAGACTGAATGGTCCGGAc                                                                                                                       <  1:745810/140‑1 (MQ=255)

                    gATATTTTTATCAGGCGCTTTGCTTTGTAAGTCCTTAATTGCACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCT‑‑ACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCAGACTGAATGGTCCGGACGGTAt                                                                                                                  <  2:1029400/140‑1 (MQ=255)

                    gATATTTTTATCAGGCGCTTTGCTTTGTAAGTCCTTAATTGCACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCT‑‑ACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCAGACTGAATGGTCCGGACGGTAt                                                                                                                  <  1:267936/140‑1 (MQ=255)

                      tatTTTTATCAGGCGCTTTGCTTTGTAAGTCCTTAATTGCACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCT‑‑ACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCAGACTGAATGGTCCGGACGGTATTa                                                                                                                >  1:451965/1‑140 (MQ=255)

                         ttttATCAGGCGCTTTGCTTTGTAAGTCCTTAATTGCACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCT‑‑ACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCAGACTGAATGGTCCGGACGGTATTACTg                                                                                                             >  1:1582435/1‑140 (MQ=255)

                             aTCAGGCGCTTTGCTTTGTAAGTCCTTAATTGCACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCT‑‑ACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCAGACTGAATGGTCCg                                                                                                                          >  2:560568/1‑123 (MQ=255)

                             aTCAGGCGCTTTGCTTTGTAAGTCCTTAATTGCACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCT‑‑ACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCAGACTGAATGGTCCg                                                                                                                          <  1:560568/123‑1 (MQ=255)

                                  gcgcTTTGCTTTGTAAGTCCTTAATTGCACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCT‑‑ACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCAGACTGAATGGTCCGGACGGTATTACTGGAATAAAGa                                                                                                    >  2:1218116/1‑140 (MQ=255)

                                  gcgcTTTGCTTTGTAAGTCCTTAATTGCACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCT‑‑ACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCAGACTGAATGGTCCGGACGGTATTACTGGAATAAAGa                                                                                                    >  1:511980/1‑140 (MQ=255)

                                   cgcTTTGCTTTGTAAGTCCTTAATTGCACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCT‑‑ACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCAGACTGAATGGTCCGGACGGTATTACTGGAATAAAGAt                                                                                                   <  1:1958752/140‑1 (MQ=255)

                                    gctttgctttGTAAGTCCTTAATTGCACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCT‑‑ACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCAGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATc                                                                                                  <  1:1316119/140‑1 (MQ=255)

                                            ttgTAAGTCCTTAATTGCACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCT‑‑ACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCAGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAg                                                                                          >  2:284315/1‑140 (MQ=255)

                                              gTAAGTCCTTAATTGCACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCT‑‑ACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCAGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAggg                                                                                        >  2:950157/1‑140 (MQ=255)

                                               tAAGTCCTTAATTGCACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCT‑‑ACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCAGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGa                                                                                       >  2:795818/1‑140 (MQ=255)

                                                  gTCCTTAATTGCACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCT‑‑ACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCAGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGatat                                                                                    <  2:1183770/140‑1 (MQ=255)

                                                   tCCTTAATTGCACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCT‑‑ACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCAGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATc                                                                                   <  2:360335/140‑1 (MQ=255)

                                                   gccgtAATTGCGCTATAAAACTCACTGCCGCACCGAAGAACGCGTTTAGTT‑‑GCCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCAGTCTGAATTGTCCAGACGGTATTACTGGAATAAAGATCGAAAGCAGGGATATc                                                                                   <  2:143020/136‑1 (MQ=255)

                                                    ccTTAATTGCACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCT‑‑ACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCAGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCa                                                                                  >  1:640338/1‑140 (MQ=255)

                                                     cTTAATTGCACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCT‑‑ACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCAGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAg                                                                                 <  1:1941349/140‑1 (MQ=255)

                                                     cTTAATTGCACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCT‑‑ACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCAGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAg                                                                                 <  2:899109/140‑1 (MQ=255)

                                                     cTTAATTGCACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCT‑‑ACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCAGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAg                                                                                 <  2:465284/140‑1 (MQ=255)

                                                      ttAATTGCACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCT‑‑ACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCAGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGc                                                                                <  1:1001885/140‑1 (MQ=255)

                                                       tAATTGCACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCT‑‑ACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCAGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCa                                                                               >  2:648854/1‑140 (MQ=255)

                                                       tAATTGCACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCT‑‑ACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCAGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCa                                                                               >  2:590448/1‑140 (MQ=255)

                                                         aTTGCACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCT‑‑ACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCAGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACt                                                                             >  1:1182034/1‑140 (MQ=255)

                                                           tGCACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCT‑‑ACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCAGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTaa                                                                           <  1:561928/140‑1 (MQ=255)

                                                             cACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCT‑‑ACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCAGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTaaaa                                                                         >  1:1150218/1‑140 (MQ=255)

                                                                     aTCTCATTACCGCACTGAAGAAGTCGTTTATCT‑‑ACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCAGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGcc                                                                 >  1:556297/1‑140 (MQ=255)

                                                                     aTCTCATTACCGCACTGAAGAAGTCGTTTATCT‑‑ACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCAGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGcc                                                                 <  1:659269/140‑1 (MQ=255)

                                                                     aTCTCATTACCGCACTGAAGAAGTCGTTTATCT‑‑ACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCAGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGcc                                                                 <  2:787737/140‑1 (MQ=255)

                                                                     aTCTCATTACCGCACTGAAGAAGTCGTTTATCT‑‑ACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCAGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGcc                                                                 <  1:1354722/140‑1 (MQ=255)

                                                                     aTCTCATTACCGCACTGAAGAAGTCGTTTATCT‑‑ACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCAGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGcc                                                                 <  1:825415/140‑1 (MQ=255)

                                                                          aTTACCGCACTGAAGAAGTCGTTTATCT‑‑ACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCAGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGtt                                                            >  1:1500193/1‑140 (MQ=255)

                                                                          aTTACCGCACTGAAGAAGTCGTTTATCT‑‑ACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCAGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGtt                                                            >  2:1269294/1‑140 (MQ=255)

                                                                            tACCGCACTGAAGAAGTCGTTTATCT‑‑ACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCAGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGcc                                                                 >  2:659497/1‑133 (MQ=255)

                                                                            tACCGCACTGAAGAAGTCGTTTATCT‑‑ACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCAGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCa                                                          >  2:173278/1‑140 (MQ=255)

                                                                            tACCGCACTGAAGAAGTCGTTTATCT‑‑ACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCAGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCa                                                          >  1:755347/1‑140 (MQ=255)

                                                                              ccGCACTGAAGAAGTCGTTTATCT‑‑ACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCAGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACg                                                        <  1:1422506/140‑1 (MQ=255)

                                                                               cGCACTGAAGAAGTCGTTTATCT‑‑ACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCAGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACgg                                                       >  2:269854/1‑140 (MQ=255)

                                                                               cGCACTGAAGAAGTCGTTTATCT‑‑ACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCAGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACgg                                                       >  2:1676033/1‑140 (MQ=255)

                                                                                gCACTGAAGAAGTCGTTTATCTACACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCAGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACg                                                        <  1:345628/140‑1 (MQ=255)

                                                                                gCACTGAAGAAGTCGTTTATCT‑‑ACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCAGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACggg                                                      <  1:1162522/140‑1 (MQ=255)

                                                                                gCACTGAAGAAGTCGTTTATCT‑‑ACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCAGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACggg                                                      <  1:2012269/140‑1 (MQ=255)

                                                                                 cACTGAAGAAGTCGTTTATCT‑‑ACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCAGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGc                                                     >  2:1747454/1‑140 (MQ=255)

                                                                                 cACTGAAGAAGTCGTTTATCT‑‑ACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCAGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGc                                                     >  2:1125469/1‑140 (MQ=255)

                                                                                 cACTGAAGAAGTCGTTTATCT‑‑ACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCAGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGc                                                     <  1:1396751/140‑1 (MQ=255)

                                                                                 cACTGAAGAAGTCGTATATCT‑‑ACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCAGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGc                                                     >  2:1322131/1‑140 (MQ=255)

                                                                                    tGAAGAAGTCGTTTATCT‑‑ACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCAGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATc                                                  <  1:1625671/140‑1 (MQ=255)

                                                                                    tGAAGAAGTCGTTTATCT‑‑ACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCAGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATc                                                  >  2:1625671/1‑140 (MQ=255)

                                                                                    tGAAGAAGTCGTTTATCT‑‑ACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCAGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATc                                                  >  1:125252/1‑140 (MQ=255)

                                                                                      aagaagTCGTTTATCT‑‑ACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCAGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCt                                                >  1:527104/1‑140 (MQ=255)

                                                                                      aagaagTCGTTTATCT‑‑ACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCAGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCt                                                >  1:1815678/1‑140 (MQ=255)

                                                                                      aagaagTCGTTTATCT‑‑ACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCAGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCt                                                <  2:1908866/140‑1 (MQ=255)

                                                                                         aagTCGTTTATCT‑‑ACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCAGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTggg                                             <  1:1676033/140‑1 (MQ=255)

                                                                                         aagTCGTTTATCT‑‑ACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCAGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTggg                                             <  1:795818/140‑1 (MQ=255)

                                                                                          agTCGTTTATCT‑‑ACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCAGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCATTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGt                                            <  2:448236/140‑1 (MQ=255)

                                                                                          agTCGTTTATCT‑‑ACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCAGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGt                                            <  2:945472/140‑1 (MQ=255)

                                                                                          agTCGTTTATCT‑‑ACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCAGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGt                                            <  2:511980/140‑1 (MQ=255)

                                                                                          agTCGTTTATCT‑‑ACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCAGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGt                                            <  2:451965/140‑1 (MQ=255)

                                                                                            tCGTTTATCT‑‑ACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCAGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTAc                                          >  2:1530390/1‑140 (MQ=255)

                                                                                            tCGTTTATCT‑‑ACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCAGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTAc                                          >  1:1250483/1‑140 (MQ=255)

                                                                                              gTTTATCT‑‑ACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCAGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCt                                        >  1:669241/1‑140 (MQ=255)

                                                                                                ttATCT‑‑ACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCAGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCttt                                      <  2:1841825/140‑1 (MQ=255)

                                                                                                ttATCT‑‑ACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCAGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCttt                                      <  1:69114/140‑1 (MQ=255)

                                                                                                ttATCT‑‑ACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCAGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGCGCATCCTGGGTACCttt                                      >  2:1955221/1‑140 (MQ=255)

                                                                                                 tATCT‑‑ACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCAGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTa                                     <  1:250164/140‑1 (MQ=255)

                                                                                                        aCCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCAGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGt                                >  2:121751/1‑140 (MQ=255)

                                                                                                            tCAATTTTTTACCCGCTGAAAACCAGGTAGCAGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATa                            <  2:1509537/140‑1 (MQ=255)

                                                                                                            tCAATTTTTTACCCGCTGAAAACCAGGTAGCAGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATa                            <  1:648854/140‑1 (MQ=255)

                                                                                                            tCAATTTTTTACCCGCTGAAAACCAGGTAGCAGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATa                            >  2:60081/1‑140 (MQ=255)

                                                                                                             cAATTTTTTACCCGCTGAAAACCAGGTAGCAGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATAc                           <  1:269854/140‑1 (MQ=255)

                                                                                                              aaTTTTTTACCCGCTGAAAACCAGGTAGCAGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATAcc                          >  1:25996/1‑140 (MQ=255)

                                                                                                                     tACCCGCTGAAAACCAGGTAGCAGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATACCTGTTTTa                   >  2:1874571/1‑140 (MQ=255)

                                                                                                                          gCTGAAAACCAGGTAGCAGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATACCTGTTTTATCTGa              >  2:618280/1‑140 (MQ=255)

                                                                                                                          gCTGAAAACCAGGTAGCAGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATACCTGTTTTATCTGa              <  2:755347/140‑1 (MQ=255)

                                                                                                                          gCTGAAAACCAGGTAGCAGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATACCTGTTTTATCTGa              >  1:496362/1‑140 (MQ=255)

                                                                                                                           cTGAAAACCAGGTAGCAGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATACCTGTTTTATCTGAc             <  1:1747454/140‑1 (MQ=255)

                                                                                                                            tGAAAACCAGGTAGCAGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATACCTGTTTTATCTGACa            <  2:1641986/140‑1 (MQ=255)

                                                                                                                                aaCCAGGTAGCAGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATACCTGTTTTATCTGACAAGCa        <  1:210895/140‑1 (MQ=255)

                                                                                                                                   cAGGTAGCAGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATACCTGTTTTATCTGACAAGCattg     <  1:774344/140‑1 (MQ=255)

                                                                                                                                    aGGTAGCAGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATACCTGTTTTATCTGACAAGCattga    <  1:1218116/140‑1 (MQ=255)

                                                                                                                                     ggTAGCAGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATACCTGTTTTATCTGACAAGCattgat   <  2:1500193/140‑1 (MQ=255)

                                                                                                                                      gTAGCAGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATACCTGTTTTATCTGACAAGCattgatt  >  1:1688118/1‑140 (MQ=255)

TGATTATGGGTGAAAATAACGATATTTTTATCAGGCGCTTTGCTTTGTAAGTCCTTAATTGCACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCT‑‑ACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCCGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATACCTGTTTTATCTGACAAGCATTGATT  >  NC_000913/2365142‑2365413

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`