| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,444,419 | G→T | R41S (CGT→AGT) | rplO ← | 50S ribosomal subunit protein L15 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,444,419 | 0 | G | T | 98.9% | 315.2 / ‑3.6 | 90 | R41S (CGT→AGT) | rplO | 50S ribosomal subunit protein L15 |
| Reads supporting (aligned to +/- strand): ref base G (1/0); new base T (42/47); total (43/47) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.78e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 | |||||||||||
TCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACGAGACTTCTGACCTTTGTGACCACGACCACCGGTTTTACCGAGGCCAGAACCGATACCACGACCCAGGCGTTTACCCGCCTTTTTGGAGCCTTCGGCCGGAGACAGAGTATTTAAACGCATCTCTTACTCC > NC_000913/3444283‑3444549 | tCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACtaga > 1:784409/1‑140 (MQ=255)tCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACtaga < 2:1703002/140‑1 (MQ=255) tACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACTAGACt > 1:708870/1‑140 (MQ=255) tACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACTAGACt < 2:47334/140‑1 (MQ=255) tAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACTAGACTTCTGa > 1:1062032/1‑140 (MQ=255) tAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACTAGACTTCTGa > 2:504658/1‑140 (MQ=255) tAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACTAGACTTCTGa < 1:1190263/140‑1 (MQ=255) aGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGGGGCATCTGACCACCCTCGAAACCGCGACGTACGCCGCCGCCAGAACTAGACTTCTGAc < 2:444432/140‑1 (MQ=255) aGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACTAGACTTCTGAc > 2:793890/1‑140 (MQ=255) aGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACTAGACTTCTGAc > 1:36306/1‑140 (MQ=255) aGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACTAGACTTCTGAc < 1:1168521/140‑1 (MQ=255) ccAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACTAGACTTCTGACCt > 1:1040946/1‑140 (MQ=255) ccAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACCGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACTAGACTTCTGACCt > 2:1533782/1‑140 (MQ=255) gTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACTAGACTTCTGACCTTtgt > 1:742401/1‑140 (MQ=255) gTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACTAGACTTCTGACCTTtgt > 2:112800/1‑140 (MQ=255) gTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACTAGACTTCTGACCTTtgt > 1:1683175/1‑140 (MQ=255) gTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACTAGACTTCTGACCTTtgt > 2:1166620/1‑140 (MQ=255) gTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACTAGACTTCTGACCTTtgt > 1:436153/1‑140 (MQ=255) acagacGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACTAGACTTCTGACCTTTGTgacca > 1:1870142/1‑140 (MQ=255) acagacGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACTAGACTTCTGACCTTTGTgacca > 2:1287772/1‑140 (MQ=255) acGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACTAGACTTCTGACCTTTGTgaccacgac > 1:1491970/1‑140 (MQ=255) cGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACTAGACTTCTGACCTTTGTgaccacgacc > 1:417024/1‑140 (MQ=255) cGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACTAGACTTCTGACCTTTGTgaccacgacc > 1:940731/1‑140 (MQ=255) gAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACTAGACTTCTGACCTTTGTgaccacgacca < 2:1248776/140‑1 (MQ=255) gAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACTAGACTTCTGACCTTTGTgaccacgacca < 1:482796/140‑1 (MQ=255) gAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACTAGACTTCTGACCTTTGTgaccacgacca > 1:1852792/1‑140 (MQ=255) aaTTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACTAGACTTCTGACCTTTGTgaccacgaccac < 2:1878388/140‑1 (MQ=255) cGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACTAGACTTCTGACCTTTGTGACCACGACCACCGGtt < 1:654697/140‑1 (MQ=255) gCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACTAGACTTCTGACCTTTGTGACCACGACCACCGGtttt > 2:262787/1‑140 (MQ=255) gCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACTAGACTTCTGACCTTTGTGACCACGACCACCGGtttt > 1:875221/1‑140 (MQ=255) gTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACTAGACTTCTGACCTTTGTGACCACGACCACCGGTTTTAcc < 2:1683175/140‑1 (MQ=255) gTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACTAGACTTCTGACCTTTGTGACCACGACCACCGGTTTTAcc < 2:1607666/140‑1 (MQ=255) gTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACTAGACTTCTGACCTTTGTGACCACGACCACCGGTTTTAcc < 2:899097/140‑1 (MQ=255) gTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACTAGACTTCTGACCTTTGTGACCACGACCACCGGTTTTAcc < 1:1974722/140‑1 (MQ=255) gTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACTAGACTTCTGACCTTTGTGACCACGACCACCGGTTTTAcc < 1:178254/140‑1 (MQ=255) gTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACTAGACTTCTGACCTTTGTGACCACGACCACCGGTTTTAcc < 2:516495/140‑1 (MQ=255) gTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACTAGACTTCTGACCTTTGTGACCACGACCACCGGTTTTAcc < 2:793424/140‑1 (MQ=255) tCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACTAGACTTCTGACCTTTGTGACCACGACCACCGGTTTTACCGAgg < 1:112800/140‑1 (MQ=255) cGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCCCCGCCAGAACTAGACTTCTGACCTTTGTGACCACGACCACCGGTTTTACCGAGGc < 2:888238/140‑1 (MQ=255) tACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACTAGACTTCTGACCTTTGTGACCACGACCACCGGTTTTACCGAGGCCAGAACCg > 2:660039/1‑140 (MQ=255) tACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACTAGACTTCTGACCTTTGTGACCACGACCACCGGTTTTACCGAGGCCAGAACCg > 1:1389670/1‑140 (MQ=255) tACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACGAGACTTCTGACCTTTGTGACCACGACCACCGGTTTTACCGAGGCCAGAACCg > 2:1472964/1‑140 (MQ=255) aaGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACTAGACTTCTGACCTTTGTGACCACGACCACCGGTTTTACCGAGGCCAGAACCGATACCa < 2:1810019/140‑1 (MQ=255) aGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACTAGACTTCTGACCTTTGTGACCACGACCACCGGTTTTACCGAGGCCAGAACCGATACCAc > 1:1531672/1‑140 (MQ=255) aGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGCCCCCCCTCGAAACCGCGACGTACGCCACCGCCAGAACTAGACTTCTGACCTTTGTGACCACGACCACCGGTTTTACCGAGGCCAGAACCGATACCACGAccc < 2:1441374/140‑1 (MQ=255) aGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACTAGACTTCTGACCTTTGTGACCACGACCACCGGTTTTACCGAGGCCAGAACCGATACCACGAccc < 1:981578/140‑1 (MQ=255) aGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACTAGACTTCTGACCTTTGTGACCACGACCACCGGTTTTACCGAGGCCAGAACCGATACCACGAccc > 1:1876718/1‑140 (MQ=255) aGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACTAGACTTCTGACCTTTGTGACCACGACCACCGGTTTTACCGAGGCCAGAACCGATACCACGAccc > 1:160321/1‑140 (MQ=255) aGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACTAGACTTCTGACCTTTGTGACCACGACC‑CCGGTTTTACCGAGGCCAGAACCGATACCACGACCCa > 1:1697136/1‑140 (MQ=255) cGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACTAGACTTCTGACCTTTGTGACCACGACCACCGGTTTTACCGAGGCCAGACCCGATACCACGACCCAgg > 2:1960845/1‑140 (MQ=255) cGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACTAGACTTCTGACCTTTGTGACCACGACCACCGGTTTTACCGAGGCCAGAACCGATACCACGACCCAgg > 2:1022311/1‑140 (MQ=255) ggTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACTAGACTTCTGACCTTTGTGACCACGACCACCGGTTTTACCGAGGCCAGAACCGATACCACGACCCAGGCGTTTACCCGCCTTTTTg < 2:1491970/140‑1 (MQ=255) agGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACTAGACTTCTGACCTTTGTGACCACGACCACCGGTTTTACCGAGGCCAGAACCGATACCACGACCCAGGCGTTTACCCGCCTTTTTGGAGCCtt > 1:1276606/1‑140 (MQ=255) agGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACTAGACTTCTGACCTTTGTGACCACGACCACCGGTTTTACCGAGGCCAGAACCGATACCACGACCCAGGCGTTTACCCGCCTTTTTGGAGCCtt < 1:1998670/140‑1 (MQ=255) gCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACTAGACTTCTGACCTTTGTGACCACGACCACCGGTTTTACCGAGGCCAGAACCGATACCACGACCCAGGCGTTTACCCGCCTTTTTGGAGCCTTCg > 1:1881744/1‑140 (MQ=255) gCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACTAGACTTCTGACCTTTGTGACCACGACCACCGGTTTTACCGAGGCCAGAACCGATACCACGACCCAGGCGTTTACCCGCCTTTTTGGAGCCTTCg > 2:1321734/1‑140 (MQ=255) aTCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACTAGACTTCTGACCTTTGTGACCACGACCACCGGTTTTACCGAGGCCAGAACCGATACCACGACCCAGGCGTTTACCCGCCTTTTTGGAGCCTTCGGc < 2:1062032/140‑1 (MQ=255) aTCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACTAGACTTCTGACCTTTGTGACCACGACCACCGGTTTTACCGAGGCCAGAACCGATACCACGACCCAGGCGTTTACCCGCCTTTTTGGAGCCTTCGGc < 1:660039/140‑1 (MQ=255) tCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACTAGACTTCTGACCTTTGTGACCACGACCACCGGTTTTACCGAGGCCAGAACCGATACCACGACCCAGGCGTTTACCCGCCTTTTTGGAGCCTTCGGcc > 1:318651/1‑140 (MQ=255) tCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACTAGACTTCTGACCTTTGTGACCACGACCACCGGTTTTACCGAGGCCAGAACCGATACCACGACCCAGGCGTTTACCCGCCTTTTTGGAGCCTTCGGcc > 2:334538/1‑140 (MQ=255) tCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACTAGACTTCTGACCTTTGTGACCACGACCACCGGTTTTACCGAGGCCAGAACCGATACCACGACCCAGGCGTTTACCCGCCTTTTTGGAGCCTTCGGcc > 2:2037574/1‑140 (MQ=255) tCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACTAGACTTCTGACCTTTGTGACCACGACCACCGGTTTTACCGAGGCCAGAACCGATACCACGACCCAGGCGTTTACCCGCCTTTTTGGAGCCTTCGGcc > 1:1648878/1‑140 (MQ=255) tCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACTAGACTTCTGACCTTTGTGACCACGACCACCGGTTTTACCGAGGCCAGAACCGATACCACGACCCAGGCGTTTACCCGCCTTTTTGGAGCCTTCGGcc > 1:688674/1‑140 (MQ=255) tCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACTAGACTTCTGACCTTTGTGACCACGACCACCGGTTTTACCGAGGCCAGAACCGATACCACGACCCAGGCGTTTACCCGCCTTTTTGGAGCCTTCGGcc > 2:1238528/1‑140 (MQ=255) tGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACTAGACTTCTGACCTTTGTGACCACGACCACCGGTTTTACCGAGGCCAGAACCGATACCACGACCCAGGCGTTTACCCGCCTTTTTGGAGCCTTCGGCCgg > 1:1758842/1‑140 (MQ=255) gACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACTAGACTTCTGACCTTTGTGACCACGACCACCGGTTTTACCGAGGCCAGAACCGATACCACGACCCAGGCGTTTACCCGCCTTTTTGGAGCCTTCGGCCGga < 2:742401/140‑1 (MQ=255) ccaccCTCGAAACCGCGACGTACGCCACCGCCAGAACTAGACTTCTGACCTTTGTGACCACGACCACCGGTTTTACCGAGGCCAGAACCGATACCACGACCCAGGCGTTTACCCGCCTTTTTGGAGCCTTCGGCCGgaga < 2:940731/140‑1 (MQ=255) ccaccCTCGAAACCGCGACGTACGCCACCGCCAGAACTAGACTTCTGACCTTTGTGACCACGACCACCGGTTTTACCGAGGCCAGAACCGATACCACGACCCAGGCGTTTACCCGCCTTTTTGGAGCCTTCGGCCGgaga < 1:1166620/140‑1 (MQ=255) ccaccCTCGAAACCGCGACGTACGCCACCGCCAGAACTAGACTTCTGACCTTTGTGACCACGACCACCGGTTTTACCGAGGCCAGAACCGATACCACGACCCAGGCGTTTACCCGCCTTTTTGGAGCCTTCGGCCGgaga < 1:566565/140‑1 (MQ=255) ccaccCTCGAAACCGCGACGTACGCCACCGCCAGAACTAGACTTCTGACCTTTGTGACCACGACCACCGGTTTTACCGAGGCCAGAACCGATACCACGACCCAGGCGTTTACCCGCCTTTTTGGAGCCTTCGGCCGgaga < 1:1203562/140‑1 (MQ=255) ccaccCTCAAAACCGCGACGTACGCCACCGCCAGAACTAGACTTCTGACCTTTGTGACCACGACCACCGGTTTTACCGAGGCCAGAACCGATACCACGACCCAGGCGTTTACCCGCCTTTTTGGAGCCTTCGGCCGgaga < 1:1204216/140‑1 (MQ=255) cccccCGAAACCGCGACGTACGCCCCCGCCAAAACTAGACTTCCGACCTTTTGGACCACGACCCCCGGTTTTACCGAGGCCAGAACCGATACCACGACCCAGGCGTTTACCCGCCTTTTTGGAGCCTTCGGCCGGAGACa < 2:708870/139‑1 (MQ=255) ccccTCGAAACCGCGACGTACGCCCCCGCCAGAACTAGACTTCTGACCTTTGTGACCCCGCCCACCGGTTTTACCGAGGCCAGAACCGATACCCCGACCCAGGCGTTTACCCGCCTTTTTGGAGCCTTCGGCCGGAGACa < 2:1999800/139‑1 (MQ=255) accCTCGAACCCCCGACGTACCCCGCCGCCAGAACTAGTCTCCTGACCTTTGTTACCACGGCCTCCGGTTTTCCCGAGGCCGGAACCGATACCGCGGCCCAGGCGTTTACCCGCCTTTTTGGAGCCTTCGGCCGGAGACa < 2:1276606/140‑1 (MQ=255) accCTCGAAACCGCGACGTACGCCACCGCCAGAACTAGACTTCTGACCTTTGTGACCACGACCACCGGTTTTACCGAGGCCAGAACCGATACCACGACCCAGGCGTTTACCCGCCTTTTTGGAGCCTTCGGCCGGAGACa < 2:1531672/140‑1 (MQ=255) accCTCGAAACCGCGACGTACGCCACCGCCAGAACTAGACTTCTGACCTTTGTGACCACGACCACCGGTTTTACCGAGGCCAGAACCGATACCACGACCCAGGCGTTTACCCGCCTTTTTGGAGCCTTCGGCCGGAGACa < 2:318651/140‑1 (MQ=255) accCTCGAAACCGCGACGTACGCCACCGCCAGAACTAGACTTCTGACCTTTGTGACCACGACCACCGGTTTTACCGAGGCCAGAACCGATACCACGACCCAGGCGTTTACCCGCCTTTTTGGAGCCTTCGGCCGGAGACa < 2:1953827/140‑1 (MQ=255) cccTCGAAACCGCGGCGTACGCCACCGCCAGAACTAGACTTCTGACCTTTGTGACCACGACCACCGGTTTTACCGAGGCCAGAACCGATACCACGACCCAGGCGTTTACCCGCCTTTTTGGAGCCTTCGGCCGGAGACag < 2:283652/140‑1 (MQ=255) cccTCGAAACCGCGACGTACGCCACCGCCAGAACTAGACTTCTGACCTTTGTGACCACGACCACCGGTTTTACCGAGGCCAGAACCGATACCACGACCCAGGCGTTTACCCGCCTTTTTGGAGCCTTCGGCCGGAGACag < 2:36306/140‑1 (MQ=255) ccTCGAAACCGCGACGTACGCCACCGCCAGAACTAGACTTCTGACCTTTGTGACCACGACCACCGGTTTTACCGAGGCCAGAACCGATACCACGACCCAGGCGTTTACCCGCCTTTTTGGAGCCTTCGGCCGGAGACaga < 2:355783/140‑1 (MQ=255) ccTCGAAACCGCGACGTACGCCACCGCCAGAACTAGACTTCTGACCTTTGTGACCACGACCACCGGTTTTACCGAGGCCAGAACCGATACCACGACCCAGGCGTTTACCCGCCTTTTTGGAGCCTTCGGCCGGAGACaga > 2:704949/1‑140 (MQ=255) cTCGAAACCGCGACGTACGCCGCCGCCAGAACTAGACTTCTGACCTTTGGGACCACGACCACCGGTTTTACCGAGGCCAGAACCGATACCCCGCCTCAGGCGTTTTCCCGCCTTTTTGGAGCCTTCGGCCGGAGACagag < 2:1515198/140‑1 (MQ=255) tgAAGCCGCGCCGTACGCCACCGCCAGAACTAGACTTCTGACCTTTGTGACCACGACCACCGGTTTTACCGAGGCCAGACCCGATACCACGACCCAGGCGTTTACCCGCCTTTTTGGAGCCTTCGGCCGGAGACAGAGTa < 2:1832458/139‑1 (MQ=255) cGAAACCGCGACGTACGCCACCGCCAGAACTAGACTTCTGACCTTTGTGACCACGACCACCGGTTTTACCGAGGCCAGAACCGATACCACGACCCAGGCGTTTACCCGCCTTTTTGGAGCCTTCGGCCGGAGACAGAGTa < 1:598878/140‑1 (MQ=255) aaaCCGCGACGTACGCCACCGCCAGAACTAGACTTCTGACCTTTGTGACCACGACCACCGGTTTTACCGAGGCCAGAACCGATACCACGACCCAGGCGTTTACCCGCCTTTTTGGAGCCTTCGGCCGGAGACAGAGTAtt > 2:1985648/1‑140 (MQ=255) cgcgACGTACGCCACCGCCAGAACTAGACTTCTGACCTTTGTGACCACGACCACCGGTTTTACCGAGGCCAGAACCGATACCACGACCCAGGCGTTTACCCGCCTTTTTGGAGCCTTCGGCCGGAGACAGAGTATTTaaa < 1:765818/140‑1 (MQ=255) cgcgACGTACGCCACCGCCAGAACTAGACTTCTGACCTTTGTGACCACGACCACCGGTTTTACCGAGGCCAGAACCGATACCACGACCCAGGCGTTTACCCGCCTTTTTGGAGCCTTCGGCCGGAGACAGAGTATTTaaa < 2:1602677/140‑1 (MQ=255) gcgACGTACGCCACCGCCAGAACTAGACTTCTGACCTTTGTGACCACGACCACCGGTTTTACCGAGGCCAGAACCGATACCACGACCCAGGCGTTTACCCGCCTTTTTGGAGCCTTCGGCCGGAGACAGAGTATTTAAAc < 2:724920/140‑1 (MQ=255) gcgACGTACGCCACCGCCAGAACTAGACTTCTGACCTTTGTGACCACGACCACCGGTTTTACCGAGGCCAGAACCGATACCACGACCCAGGCGTTTACCCGCCTTTTTGGAGCCTTCGGCCGGAGACAGAGTATTTAAAc > 1:730922/1‑140 (MQ=255) gACGTACGCCACCGCCAGAACTAGACTTCTGACCTTTGTGACCACGACCACCGGTTTTACCGAGGCCAGAACCGATACCACGACCCAGGCGTTTACCCGCCTTTTTGGAGCCTTCGGCCGGAGACAGAGTATTTAAACGc < 1:704949/140‑1 (MQ=255) gACGTACGCCACCGCCAGAACTAGACTTCTGACCTTTGTGACCACGACCACCGGTTTTACCGAGGCCAGAACCGATACCACGACCCAGGCGTTTACCCGCCTTTTTGGAGCCTTCGGCCGGAGACAGAGTATTTAAACGc < 2:1122714/140‑1 (MQ=255) gACGTACGCCACCGCCAGAACTAGACTTCTGACCTTTGTGACCACGACCACCGGTTTTACCGAGGCCAGAACCGATACCACGACCCAGGCGTTTACCCGCCTTTTTGGAGCCTTCGGCCGGAGACAGAGTATTTAAACGc < 1:736564/140‑1 (MQ=255) gACGTACGCCACCGCCAGAACTAGACTTCTGACCTTTGTGACCACGACCACCGGTTTTACCGAGGCCAGAACCGATACCACGACCCAGGCGTTTACCCGCCTTTTTGGAGCCTTCGGCCGGAGACAGAGTATTTAAACGc < 1:766625/140‑1 (MQ=255) tACGCCACCGCCAGAACTAGACTTCTGACCTTTGTGACCACGACCACCGGTTTTACCGAGGCCAGAACCGATACCACGACCCAGGCGTTTACCCGCCTTTTTGGAGCCTTCGGCCGGAGACAGAGTATTTAAACGCAtct > 1:196800/1‑140 (MQ=255) cGCCACCGCCAGAACTAGACTTCTGACCTTTGTGACCACGACCACCGGTTTTACCGAGGCCAGAACCGATACCACGACCCAGGCGTTTACCCGCCTTTTTGGAGCCTTCGGCCGGAGACAGAGTATTTAAACGCATctct < 1:1979117/140‑1 (MQ=255) ccACCGCCAGAACTAGACTTCTGACCTTTGTGACCACGACCACCGGTTTTACCGAGGCCAGAACCGATACCACGACCCAGGCGTTTACCCGCCTTTTTGGAGCCTTCGGCCGGAGACAGAGTATTTAAACGCATCTCTTa < 1:262787/140‑1 (MQ=255) cGCCAGAACTAGACTTCTGACCTTTGTGACCACGACCACCGGTTTTACCGAGGCCAGAACCGATACCACGACCCAGGCGTTTACCCGCCTTTTTGGAGCCTTCGGCCGGAGACAGAGTATTTAAACGCATCTCTTActcc > 1:320238/1‑140 (MQ=255) | TCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACGAGACTTCTGACCTTTGTGACCACGACCACCGGTTTTACCGAGGCCAGAACCGATACCACGACCCAGGCGTTTACCCGCCTTTTTGGAGCCTTCGGCCGGAGACAGAGTATTTAAACGCATCTCTTACTCC > NC_000913/3444283‑3444549 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |