BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,506,903	C→A	pseudogene (43/249 nt)	yjhE →	KpLE2 phage‑like element; putative membrane protein (pseudogene)

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,506,903	0	C	A	100.0%	364.7 / NA	103	pseudogene (43/249 nt)	yjhE	KpLE2 phage‑like element; putative membrane protein (pseudogene)
Reads supporting (aligned to +/- strand): ref base C (0/0); new base A (59/44); total (59/44)

Only 100 of 103 total aligned reads displayed.

GCGCGCTTCGCAATAAAATCTCCCTTCGCCCAGTATTGGGAAAAGTAGATACATTCAAACTGTGTACGCTGTTTCGTCTCACAGTTCACGACATTGCTGGCCGATGAGCTGACCATTGGGCCTATCCGGGCTGTCCCGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATTGATGAACGCCGGTTCCGCTGTCGCCGACATTATTTCACCTATCGCCTTTGGCATTATTATCGACAAAACAGGCAACTGGAGTTTACCATTCTA  >  NC_000913/4506768‑4507039

gcgcgcTTCGCAATAAAATCTCCCTTCGCCCAGTATTGGGAAAAGTAGATACATTCAAACTGTGTACGCTGTTTCGTCTCACAGTTCACGACATTGCTGGCCGATGAGCTGACCATTGGGCCTATCCGGGCTGTCACGAt                                                                                                                                      <  2:399523/140‑1 (MQ=255)

   cgcTTCGCAATAAAATCTCCCTTCGCCCAGTATTGGGAAAAGTAGATACATTCAAACTGTGTACGCTGTTTCGTCTCACAGTTCACGACATTGCTGGCCGATGAGCTGACCATTGGGCCTATCCGGGCTGTCACGATGGa                                                                                                                                   >  1:381739/1‑140 (MQ=255)

     cTTCGCAATAAAATCTCCCTTCGCCCAGTATTGGGAAAAGTAGATACATTCAAACTGTGTACGCTGTTTCGTCTCACAGTTCACGACATTGCTGGCCGATGAGCTGACCATTGGGCCTATCCGGGCTGTCACGAt                                                                                                                                      <  1:392268/135‑1 (MQ=255)

     cTTCGCAATAAAATCTCCCTTCGCCCAGTATTGGGAAAAGTAGATACATTCAAACTGTGTACGCTGTTTCGTCTCACAGTTCACGACATTGCTGGCCGATGAGCTGACCATTGGGCCTATCCGGGCTGTCACGAt                                                                                                                                      >  2:392268/1‑135 (MQ=255)

     cTTCGCAATAAAATCTCCCTTCGCCCAGTATTGGGAAAAGTAGATACATTCAAACTGTGTACGCTGTTTCGTCTCACAGTTCACGACATTGCTGGCCGATGAGCTGACCATTGGGCCTATCCGGGCTGTCACGATGGata                                                                                                                                 >  1:668809/1‑140 (MQ=255)

     cTTCGCAATAAAATCTCCCTTCGCCCAGTATTGGGAAAAGTAGATACATTCAAACTGTGTACGCTGTTTCGTCTCACAGTTCACGACATTGCTGGCCGATGAGCTGACCATTGGGCCTATCCGGGCTGTCACGATGGata                                                                                                                                 >  1:964538/1‑140 (MQ=255)

       tCGCAATAAAATCTCCCTTCGCCCAGTATTGGGAAAAGTAGATACATTCAAACTGTGTACGCTGTTTCGTCTCACAGTTCACGACATTGCTGGCCGATGAGCTGACCATTGGGCCTATCCGGGCTGTCACGATGGATAtt                                                                                                                               <  2:1020188/140‑1 (MQ=255)

         gCAATAAAATCTCCCTTCGCCCAGTATTGGGAAAAGTAGATACATTCAAACTGTGTACGCTGTTTCGTCTCACAGTTCACGACATTGCTGGCCGATGAGCTGACCATTGGGCCTATCCGGGCTGTCACGATGGATATTAc                                                                                                                             <  2:651621/140‑1 (MQ=255)

         gCAATAAAATCTCCCTTCGCCCAGTATTGGGAAAAGTAGATACATTCAAACTGTGTACGCTGTTTCGTCTCACAGTTCACGACATTGCTGGCCGATGAGCTGACCATTGGGCCTATCCGGGCTGTCACGATGGATATTAc                                                                                                                             <  2:26568/140‑1 (MQ=255)

             tAAAATCTCCCTTCGCCCAGTATTGGGAAAAGTAGATACATTCAAACTGTGTACGCTGTTTCGTCTCACAGTTCACGACATTGCTGGCCGATGAGCTGACCATTGGGCCTATCCGGGCTGTCACGATGGATATTACGCCg                                                                                                                         <  2:338148/140‑1 (MQ=255)

               aaaTCTCCCTTCGCCCAGTATTGGGAAAAGTAGATACATTCAAACTGTGTACGCTGTTTCGTCTCACAGTTCACGACATTGCTGGCCGATGAGCTGACCATTGGGCCTATCCGGGCTGTCACGATGGATATTACGCCGaa                                                                                                                       <  2:802602/140‑1 (MQ=255)

                       cTTCGCCCAGTATTGGGAAAAGTAGATACATTCAAACTGTGTACGCTGTTTCGTCTCACAGTTCACGACATTGCTGGCCGATGAGCTGACCATTGGGCCTATCCGGGCTGTCACGATGGATATTACGCCGAAGTATGTgg                                                                                                               >  2:483835/1‑140 (MQ=255)

                          cGCCCAGTATTGGGAAAAGTAGATACATTCAAACTGTGTACGCTGTTTCGTCTCACAGTTCACGACATTGCTGGCCGATGAGCTGACCATTGGGCCTATCCGGGCTGTCACGATGGATATTACGCCGaa                                                                                                                       >  1:1099501/1‑129 (MQ=255)

                          cGCCCAGTATTGGGAAAAGTAGATACATTCAAACTGTGTACGCTGTTTCGTCTCACAGTTCACGACATTGCTGGCCGATGAGCTGACCATTGGGCCTATCCGGGCTGTCACGATGGATATTACGCCGaa                                                                                                                       <  2:1099501/129‑1 (MQ=255)

                           gCCCAGTATTGGGAAAAGTAGATACATTCAAACTGTGTACGCTGTTTCGTCTCACAGTTCACGACATTGCTGGCCGATGAGCTGACCATTGGGCCTATCCGGGCTGTCACGATGGATATTACGCCGAAGTATGTGGGAAt                                                                                                           >  1:641832/1‑140 (MQ=255)

                            cccAGTATTGGGAAAAGTAGATACATTCAAACTGTGTACGCTGTTTCGTCTCACAGTTCACGACATTGCTGGCCGATGAGCTGACCATTGGGCCTATCCGGGCTGTCACGATGGATATTACGCCGAAGTATGTGGGAAtt                                                                                                          >  1:796634/1‑140 (MQ=255)

                              cAGTATTGGGAAAAGTAGATACATTCAAACTGTGTACGCTGTTTCGTCTCACAGTTCACGACATTGCTGGCCGATGAGCTGACCATTGGGCCTATCCGGGCTGTCACGATGGATATTACGCCGAAGTATGTGGGAATTGc                                                                                                        <  1:483835/140‑1 (MQ=255)

                              cAGTATTGGGAAAAGTAGATACATTCAAACTGTGTACGCTGTTTCGTCTCACAGTTCACGACATTGCTGGCCGATGAGCTGACCATTGGGCCTATACGGGCTGTCACGATGGATATTACGCCGAAGTATGTGGGAATTGc                                                                                                        <  2:705410/140‑1 (MQ=255)

                                gTATTGGGAAAAGTAGATACATTCAAACTGTGTACGCTGTTTCGTCTCACAGTTCACGACATTGCTGGCCGATGAGCTGACCATTGGGCCTATCCGGGCTGTCACGATGGATATTACGCCGAAGTATGTGGGAATTGCCa                                                                                                      >  1:24222/1‑140 (MQ=255)

                                gTATTGGGAAAAGTAGATACATTCAAACTGTGTACGCTGTTTCGTCTCACAGTTCACGACATTGCTGGCCGATGAGCTGACCATTGGGCCTATCCGGGCTGTCACGATGGATATTACGCCGAAGTATGTGGGAATTGCCa                                                                                                      >  2:712296/1‑140 (MQ=255)

                                gTATTGGGAAAAGTAGATACATTCAAACTGTGTACGCTGTTTCGTCTCACAGTTCACGACATTGCTGGCCGATGAGCTGACCATTGGGCCTATCCGGGCTGTCACGATGGATATTACGCCGAAGTATGTGGGAATTGCCa                                                                                                      >  2:866427/1‑140 (MQ=255)

                                           aGTAGATACATTCAAACTGTGTACGCTGTTTCGTCTCACAGTTCACGACATTGCTGGCCGATGAGCTGACCATTGGGCCTATCCGGGCTGTCACGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATtgatg                                                                                           >  2:372628/1‑140 (MQ=255)

                                           aGTAGATACATTCAAACTGTGTACGCTGTTTCGTCTCACAGTTCACGACATTGCTGGCCGATGAGCTGACCATTGGGCCTATCCGGGCTGTCACGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATtgatg                                                                                           >  1:307145/1‑140 (MQ=255)

                                           aGTAGATACATTCAAACTGTGTACGCTGTTTCGTCTCACAGTTCACGACATTGCTGGCCGATGAGCTGACCATTGGGCCTATCCGGGCTGTCACGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATtgatg                                                                                           >  2:256171/1‑140 (MQ=255)

                                           aGTAGATACATTCAAACTGTGTACGCTGTTTCGTCTCACAGTTCACGACATTGCTGGCCGATGAGCTGACCATTGGGCCTATCCGGGCTGTCACGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATtgatg                                                                                           >  2:1118605/1‑140 (MQ=255)

                                           aGTAGATACATTCAAACTGTGTACGCTGTTTCGTCTCACAGTTCACGACATTGCTGGCCGATGAGCTGACCATTGGGCCTATCCGGGCTGTCACGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATtgatg                                                                                           >  1:1125638/1‑140 (MQ=255)

                                           aGTAGATACATTCAAACTGTGTACGCTGTTTCGTCTCACAGTTCACGACATTGCTGGCCGATGAGCTGACCATTGGGCCTATCCGGGCTGTCACGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATtgatg                                                                                           >  1:395271/1‑140 (MQ=255)

                                           aGTAGATACATTCAAACTGTGTACGCTGTTTCGTCTCACAGTTCACGACATTGCTGGCCGATGAGCTGACCATTGGGCCTATCCGGGCTGTCACGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATtgatg                                                                                           >  1:1033003/1‑140 (MQ=255)

                                           aGTAGATACATTCAAACTGTGTACGCTGTTTCGTCTCACAGTTCACGACATTGCTGGCCGATGAGCTGACCATTGGGCCTATCCGGGCTGTCACGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATtgatg                                                                                           <  1:517075/140‑1 (MQ=255)

                                           aGTAGATACATTCAAACTGTGTACGCTGTTTCGTCTCACAGTTCACGACATTGCTGGCCGATGAGCTGACCATTGGGCCTATCCGGGCTGTCACGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATtgatg                                                                                           >  1:1034199/1‑140 (MQ=255)

                                             tAGATACATTCAAACTGTGTACGCTGTTTCGTCTCACAGTTCACGACATTGCTGGCCGATGAGCTGACCATTGGGCCTATCCGGGCTGTCACGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATTGATGaa                                                                                         >  2:973691/1‑140 (MQ=255)

                                                aTACATTCAAACTGTGTACGCTGTTTCGTCTCACAGTTCACGACATTGCTGGCCGATGAGCTGACCATTGGGCCTATCCGGGCTGTCACGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATTGATGAACGc                                                                                      <  1:372628/140‑1 (MQ=255)

                                                aTACATTCAAACTGTGTACGCTGTTTCGTCTCACAGTTCACGACATTGCTGGCCGATGAGCTGACCATTGGGCCTATCCGGGCTGTCACGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATTGATGAACGc                                                                                      <  1:256171/140‑1 (MQ=255)

                                                      tCAAACTGTGTACGCTGTTTCGTCTCACAGTTCACGACATTGCTGGCCGATGAGCTGACCATTGGGCCTATCCGGGCTGTCACGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATTGATGAACGCCGGTTc                                                                                >  2:293179/1‑140 (MQ=255)

                                                       cAAACTGTGTACGCTGTTTCGTCTCACAGTTCACGACATTGCTGGCCGATGAGCTGACCATTGGGCCTATCCGGGCTGTCACGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATTGATGAACGCCGGTTcc                                                                               >  1:271329/1‑140 (MQ=255)

                                                         aaCTGTGTACGCTGTTTCGTCTCACAGTTCACGACATTGCTGGCCGATGAGCTGACCATTGGGCCTATCCGGGCTGTCACGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATTGATGAACGCCGGTTCCGc                                                                             >  2:1136411/1‑140 (MQ=255)

                                                              tgtACGCTGTTTCGTCTCACAGTTCACGACATTGCTGGCCGATGAGCTGACCATTGGGCCTATCCGGGCTGTCACGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATTGATGAACGCCGGTTCCGCTGTCg                                                                        >  1:571275/1‑140 (MQ=255)

                                                              tgtACGCTGTTTCGTCTCACAGTTCACGACATTGCTGGCCGATGAGCTGACCATTGGGCCTATCCGGGCTGTCACGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATTGATGAACGCCGGTTCCGCTGTCg                                                                        >  2:307298/1‑140 (MQ=255)

                                                              tgtACGCTGTTTCGTCTCACAGTTCACGACATTGCTGGCCGATGAGCTGACCATTGGGCCTATCCGGGCTGTCACGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATTGATGAACGCCGGTTCCGCTGTCg                                                                        >  1:225587/1‑140 (MQ=255)

                                                              tgtACGCTGTTTCGTCTCACAGTTCACGACATTGCTGGCCGATGAGCTGACCATTGGGCCTATCCGGGCTGTCACGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATTGATGAACGCCGGTTCCGCTGTCg                                                                        >  2:505268/1‑140 (MQ=255)

                                                              tgtACGCTGTTTCGTCTCACAGTTCACGACATTGCTGGCCGATGAGCTGACCATTGGGCCTATCCGGGCTGTCACGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATTGATGAACGCCGGTTCCGCTGTCg                                                                        >  1:886132/1‑140 (MQ=255)

                                                              tgtACGCTGTTTCGTCTCACAGTTCACGACATTGCTGGCCGATGAGCTGACCATTGGGCCTATCCGGGCTGTCACGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATTGATGAACGCCGGTTCCGCTGTCg                                                                        >  1:1098343/1‑140 (MQ=255)

                                                                tACGCTGTTTCGTCTCACAGTTCACGACATTGCTGGCCGATGAGCTGACCATTGGGCCTATCCGGGCTGTCACGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATTGATGAACGCCGGTTCCGCTGTCGcc                                                                      <  1:307298/140‑1 (MQ=255)

                                                                tACGCTGTTTCGTCTCACAGTTCACGACATTGCTGGCCGATGAGCTGACCATTGGGCCTATCCGGGCTGTCACGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATTGATGAACGCCGGTTCCGCTGTCGcc                                                                      >  1:281920/1‑140 (MQ=255)

                                                                tACGCTGTTTCGTCTCACAGTTCACGACATTGCTGGCCGATGAGCTGACCATTGGGCCTATCCGGGCTGTCACGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATTGATGAACGCCGGTTCCGCTGTCGcc                                                                      <  2:1034199/140‑1 (MQ=255)

                                                                tACGCTGTTTCGTCTCACAGTTCACGACATTGCTGGCCGATGAGCTGACCATTGGGCCTATCCGGGCTGTCACGATGGATATTACGCCG‑AGTATGTGGGAATTGCCAGCGGATTGATGAACGCCGGTTCCGCTGTCGCCg                                                                     >  1:859208/1‑140 (MQ=255)

                                                                  cGCTGTTTCGTCTCACAGTTCACGACATTGCTGGCCGATGAGCTGACCATTGGGCCTATCCGGGCTGTCACGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATTGATGAACGCCGGTTCCGCTGTCGCCGa                                                                    <  2:1125638/140‑1 (MQ=255)

                                                                  cGCTGTTTCGTCTCACAGTTCACGACATTGCTGGCCGATGAGCTGACCATTGGGCCTATCCGGGCTGTCACGATGGATATTACGCCG‑AGTATGTGGGAATTGCCAGCGGATTGATGAACGCCGGTTCCGCTGTCGCCGAc                                                                   <  2:859208/140‑1 (MQ=255)

                                                                   gCTGTTTCGTCTCACAGTTCACGACATTGCTGGCCGATGAGCTGACCATTGGGCCTATCCGGGCTGTCACGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATTGATGAACGCCGGTTCCGCTGTCGCCGAc                                                                   <  2:1098343/140‑1 (MQ=255)

                                                                   gCTGTTTCGTCTCACAGTTCACGACATTGCTGGCCGATGAGCTGACCATTGGGCCTATCCGGGCTGTCACGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATTGATGAACGCCGGTTCCGCTGTCGCCGAc                                                                   <  2:886132/140‑1 (MQ=255)

                                                                     tGTTTCGTCTCACAGTTCACGACATTGCTGGCCGATGAGCTGACCATTGGGCCTATCCGGGCTGTCACGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATTGATGAACGCCGGTTCCGCTGTCGCCGACat                                                                 <  2:395271/140‑1 (MQ=255)

                                                                        ttCGTCTCACAGTTCACGACATTGCTGGCCGATGAGCTGACCATTGGGCCTATCCGGGCTGTCACGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATTGATGAACGCCGGTTCCGCTGTCGCCGACattat                                                              >  1:904071/1‑140 (MQ=255)

                                                                         tCGTCTCACAGTTCACGACATTGCTGGCCGATGAGCTGACCATTGGGCCTATCCGGGCTGTCACGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATTGATGAACGCCGGTTCCGCTGTCGCCGACattatt                                                             <  1:1118605/140‑1 (MQ=255)

                                                                          cGTCTCACAGTTCACGACATTGCTGGCCGATGAGCTGACCATTGGGCCTATCCGGGCTGTCACGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATTGATGAACGCCGGTTCCGCTGTCGCCGACATTAttt                                                            <  2:1033003/140‑1 (MQ=255)

                                                                              tcACAGTTCACGACATTGCTGGCCGATGAGCTGACCATTGGGCCTATCCGGGCTGTCACGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATTGATGAACGCCGGTTCCGCTGTCGCCGACATTATTTCAcc                                                        >  1:778965/1‑140 (MQ=255)

                                                                                 caGTTCACGACATTGCTGGCCGATGAGCTGACCATTGGGCCTATCCGGGCTGTCACGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATTGATGAACGCCGGTTCCGCTGTCGCCGACATTATTTCACCTa                                                      <  1:1132762/139‑1 (MQ=255)

                                                                                 caGTTCACGACATTGCTGGCCGATGAGCTGACCATTGGGCCTATCCGGGCTGTCACGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATTGATGAACGCCGGTTCCGCTGTCGCCGACATTATTTCACCTa                                                      >  2:1132762/1‑139 (MQ=255)

                                                                                 caGTTCACGACATTGCTGGCCGATGAGCTGACCATTGGGCCTATCCGGGCTGTCACGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATTGATGAACGCCGGTTCCGCTGTCGCCGACATTATTTCACCTAt                                                     >  2:574944/1‑140 (MQ=255)

                                                                                 caGTTCACGACATTGCTGGCCGATGAGCTGACCATTGGGCCTATCCGGGCTGTCACGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATTGATGAACGCCGGTTCCGCTGTCGCCGACATTATTTCACCTAt                                                     <  1:866427/140‑1 (MQ=255)

                                                                                 caGTTCACGACATTGCTGGCCGATGAGCTGACCATTGGGCCTATCCGGGCTGTCACGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATTGATGAACGCCGGTTCCGCTGTCGCCGACATTATTTCACCTAt                                                     >  2:251194/1‑140 (MQ=255)

                                                                                    ttCACGACATTGCTGGCCGATGAGCTGACCATTGGGCCTATCCGGGCTGTCACGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATTGATGAACGCCGGTTCCGCTGTCGCCGACATTAttt                                                            <  1:953891/130‑1 (MQ=255)

                                                                                    ttCACGACATTGCTGGCCGATGAGCTGACCATTGGGCCTATCCGGGCTGTCACGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATTGATGAACGCCGGTTCCGCTGTCGCCGACATTAttt                                                            >  2:953891/1‑130 (MQ=255)

                                                                                    ttCACGACATTGCTGGCCGATGAGCTGACCATTGGGCCTATCCGGGCTGTCACGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATTGATGAACGCCGGTTCCGCTGTCGCCGACATTATTTCACCTATCGc                                                  >  2:885106/1‑140 (MQ=255)

                                                                                     tCACGACATTGCTGGCCGATGAGCTGACCATTGGGCCTATCCGGGCTGTCACGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATTGATGAACGCCGGTTCCGCTGTCGCCGACATTATTTCACCTATCGcc                                                 <  2:668809/140‑1 (MQ=255)

                                                                                     tCACGACATTGCTGGCCGATGAGCTGACCATTGGGCCTATCCGGGCTGTCACGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATTGATGAACGCCGGTTCCGCTGTCGCCGACATTATTTCACCTATCGcc                                                 <  2:143280/140‑1 (MQ=255)

                                                                                      cACGACATTGCTGGCCGATGAGCTGACCATTGGGCCTATCCGGGCTGTCACGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATTGATGAACGCCGGTTCCGCTGTCGCCGACATTATTTCACCTATCGCCt                                                >  1:540321/1‑140 (MQ=255)

                                                                                      cACGACATTGCTGGCCGATGAGCTGACCATTGGGCCTATCCGGGCTGTCACGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATTGATGAACGCCGGTTCCGCTGTCGCCGACATTATTTCACCTATCGCCt                                                >  1:725913/1‑140 (MQ=255)

                                                                                            aTTGCTGGCCGATGAGCTGACCATTGGGCCTATCCGGGCTGTCACGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATTGATGAACGCCGGTTCCGCTGTCGCCGACATTATTTCACCTATCGCCTTTGGCa                                          <  1:973691/140‑1 (MQ=255)

                                                                                            aTTGCTGGCCGATGAGCTGACCATTGGGCCTATCCGGGCTGTCACGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATTGATGAACGCCGGTTCCGCTGTCGCCGACATTATTTCACCTATCGCCTTTGGCa                                          <  2:1040334/140‑1 (MQ=255)

                                                                                              tGCTGGCCGATGAGCTGACCATTGGGCCTATCCGGGCTGTCACGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATTGATGAACGCCGGTTCCGCTGTCGCCGACATTATTTCACCTATCGCCttt                                              >  1:182232/1‑134 (MQ=255)

                                                                                              tGCTGGCCGATGAGCTGACCATTGGGCCTATCCGGGCTGTCACGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATTGATGAACGCCGGTTCCGCTGTCGCCGACATTATTTCACCTATCGCCttt                                              <  2:182232/134‑1 (MQ=255)

                                                                                              tGCTGGCCGATGAGCTGACCATTGGGCCTATCCGGGCTGTCACGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATTGATGAACGCCGGTTCCGCTGTCGCCGACATTATTTCACCTATCGCCTTTGGCatt                                        >  2:822211/1‑140 (MQ=255)

                                                                                              tGCTGGCCGATGAGCTGACCATTGGGCCTATCCGGGCTGTCACGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATTGATGAACGCCGGTTCCGCTGTCGCCGACATTATTTCACCTATCGCCTTTGGCatt                                        >  1:787500/1‑140 (MQ=255)

                                                                                              tGCTGGCCGATGAGCTGACCATTGGGCCTATCCGGGCTGTCACGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATTGATGAACGCCGGTTCCGCTGTCGCCGACATTATTTCACCTATCGCCTTTGGCatt                                        >  1:390461/1‑140 (MQ=255)

                                                                                              tGCTGGCCGATGAGCTGACCATTGGGCCTATCCGGGCTGTCACGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATTGATGAACGCCGGTTCCGCTGTCGCCGACATTATTTCACCTATCGCCTTTGGCatt                                        >  2:721928/1‑140 (MQ=255)

                                                                                                 tGGCCGATGAGCTGACCATTGGGCCTATCCGGGCTGTCACGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATTGATGAACGCCGGTTCCGCTGTCGCCGACATTATTTCACCTATCGCCTTTGGCattatt                                     <  2:621976/140‑1 (MQ=255)

                                                                                                   gCCGATGAGCTGACCATTGGGCCTATCCGGGCTGTCACGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATTGATGAACGCCGGTTCCGCTGTCGCCGACATTATTTCACCTATCGCCTTTGGCATtattat                                   >  2:419823/1‑140 (MQ=255)

                                                                                                   gCCGATGAGCTGACCATTGGGCCTATCCGGGCTGTCACGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATTGATGAACGCCGGTTCCGCTGTCGCCGACATTATTTCACCTATCGCCTTTGGCATtattat                                   >  1:537345/1‑140 (MQ=255)

                                                                                                   gCCGATGAGCTGACCATTGGGCCTATCCGGGCTGTCACGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATTGATGAACGCCGGTTCCGCTGTCGCCGACATTATTTCACCTATCGCCTTTGGCATtattat                                   >  2:563573/1‑140 (MQ=255)

                                                                                                     cGATGAGCTGACCATTGGGCCTATCCGGGCTGTCACGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATTGATGAACGCCGGTTCCGCTGTCGCCGACATTATTTCACCTATCGCCTTTGGCATTATTATCg                                 <  2:453421/140‑1 (MQ=255)

                                                                                                     cGATGAGCTGACCATTGGGCCTATCCGGGCTGTCACGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATTGATGAACGCCGGTTCCGCTGTCGCCGACATTATTTCACCTATCGCCTTTGGCATTATTATCg                                 >  1:453421/1‑140 (MQ=255)

                                                                                                     cGATGAGCTGACCATTGGGCCTATCCGGGCTGTCACGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATTGATGAACGCCGGTTCCGCTGTCGCCGACATTATTTCACCTATCGCCTTTGGCATTATTATCg                                 >  1:447792/1‑140 (MQ=255)

                                                                                                      gATGAGCTGACCATTGGGCCTATCCGGGCTGTCACGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATTGATGAACGCCGGTTCCGCTGTCGCCGACATTATTTCACCTATCGCCTTTGGCATTATTATCGa                                <  2:964538/140‑1 (MQ=255)

                                                                                                             tGACCATTGGGCCTATCCGGGCTGTCACGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATTGATGAACGCCGGTTCCGCTGTCGCCGACATTATTTCACCTATCGCCTTTGGCATTATTATCGACAAAACa                         >  1:306762/1‑140 (MQ=255)

                                                                                                                   ttGGGCCTATCCGGGCTGTCACGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATTGATGAACGCCGGTTCCGCTGTCGCCGACATTATTTCACCTATCGCCTTTGGCATTATTATCGACAAAACAGGCAAc                   <  1:419823/140‑1 (MQ=255)

                                                                                                                      ggCCTATCCGGGCTGTCACGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATTGATGAACGCCGGTTCCGCTGTCGCCGACATTATTTCACCTATCGCCTTTGGCATTATTATCGACAAAACAGGCAACTgg                >  2:1036658/1‑140 (MQ=255)

                                                                                                                         cTATCCGGGCTGTCACGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATTGATGAACGCCGGTTCCGCTGTCGCCGACATTATTTCACCTATCGCCTTTGGCATTATTATCGACAAAACAGGCAACTGGAGt             >  2:142610/1‑140 (MQ=255)

                                                                                                                         cTATCCGGGCTGTCACGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATTGATGAACGCCGGTTCCGCTGTCGCCGACATTATTTCACCTATCGCCTTTGGCATTATTATCGACAAAACAGGCAACTGGAGt             >  1:273854/1‑140 (MQ=255)

                                                                                                                          tATCCGGGCTGTCACGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATTGATGAACGCCGGTTCCGCTGTCGCCGACATTATTTCACCTATCGCCTTTGGCATTATTATCGACAAAACAGGCAACTGGAGtt            <  1:1094109/140‑1 (MQ=255)

                                                                                                                           aTCCGGGCTGTCACGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATTGATGAACGCCGGTTCCGCTGTCGCCGACATTATTTCACCTATCGCCTTTGGCATTATTATCGACAAAACAGGCAACTGGAGttt           >  2:237687/1‑140 (MQ=255)

                                                                                                                            tCCGGGCTGTCACGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATTGATGAACGCCGGTTCCGCTGTCGCCGACATTATTTCACCTATCGCCTTTGGCATTATTATCGACAAAACAGGCAACTGGAGTTTa          <  2:447792/140‑1 (MQ=255)

                                                                                                                             ccGGGCTGTCACGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATTGATGAACGCCGGTTCCGCTGTCGCCGACATTATTTCACCTATCGCCTTTGGCATTATTATCGACAAAACAGGCAACTGGAGTTTAc         <  1:142610/140‑1 (MQ=255)

                                                                                                                               gggCTGTCACGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATTGATGAACGCCGGTTCCGCTGTCGCCGACATTATTTCACCTATCGCCTTTGGCATTATTATCGACAAAACAGGCAACTGGAGTTTACCa       <  2:537345/140‑1 (MQ=255)

                                                                                                                               gggCTGTCACGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATTGATGAACGCCGGTTCCGCTGTCGCCGACATTATTTCACCTATCGCCTTTGGCATTATTATCGACAAAACAGGCAACTGGAGTTTACCa       <  2:225587/140‑1 (MQ=255)

                                                                                                                                ggCTGTCACGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATTGATGAACGCCGGTTCCGCTGTCGCCGACATTATTTCACCTATCGCCTTTGGCATTATTATCGACAAAACAGGCAACTGGAGTTTACCAt      >  2:913001/1‑140 (MQ=255)

                                                                                                                                 gCTGTCACGATGGGTATTACGCCGAAGTATGTGGGAATTGCCAGCGGATTGATGAACGCCGGTTCCGCTGTCGCCGACATTATTTCACCTATCGCCTTTGGCATTATTATCGACAAAACAGGCAACTGGAGTTTACCAtt     >  2:857163/1‑140 (MQ=255)

                                                                                                                                 gCTGTCACGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATTGATGAACGCCGGTTCCGCTGTCGCCGACATTATTTCACCTATCGCCTTTGGCATTATTATCGACAAAACAGGCAACTGGAGTTTa          <  1:999627/135‑1 (MQ=255)

                                                                                                                                 gCTGTCACGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATTGATGAACGCCGGTTCCGCTGTCGCCGACATTATTTCACCTATCGCCTTTGGCATTATTATCGACAAAACAGGCAACTGGAGTTTACCAtt     >  2:793778/1‑140 (MQ=255)

                                                                                                                                   tGTCACGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATTGATGAACGCCGGTTCCGCTGTCGCCGACATTATTTCACCTATCGCCTTTGGCATTATTATCGACAAAACAGGCAACTGGAGTTTACCATTCt   <  1:713477/140‑1 (MQ=255)

                                                                                                                                    gTCACGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATTGATGAACGCCGGTTCCGCTGTCGCCGACATTATTTCACCTATCGCCTTTGGCATTATTATCGACAAAACAGGCAACTGGAGTTTACCATTCTa  <  1:913001/140‑1 (MQ=255)

GCGCGCTTCGCAATAAAATCTCCCTTCGCCCAGTATTGGGAAAAGTAGATACATTCAAACTGTGTACGCTGTTTCGTCTCACAGTTCACGACATTGCTGGCCGATGAGCTGACCATTGGGCCTATCCGGGCTGTCCCGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATTGATGAACGCCGGTTCCGCTGTCGCCGACATTATTTCACCTATCGCCTTTGGCATTATTATCGACAAAACAGGCAACTGGAGTTTACCATTCTA  >  NC_000913/4506768‑4507039

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`