Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,628,649	0	A	C	30.4%	117.5 / 15.8	56	intergenic (+102/+206)	nadR/ettA	DNA‑binding transcriptional repressor/NMN adenylyltransferase NadR/energy‑dependent translational throttle protein EttA
Reads supporting (aligned to +/- strand):  ref base A (32/7);  new base C (0/17);  total (32/24)
Fisher's exact test for biased strand distribution p-value = 3.53e-09
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

TGGAACTGGTGCGGGAGATGATGGGGGAGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAACCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTATCAGGCCTACAGTTTTACA  >  NC_000913/4628510‑4628788                                                                                                                                            |                                                                                                                                            tGGAACTGGTGCGGGAGATGATGGGGGAGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGaaaaaa                                                                                                                                             >  2:1309019/1‑140 (MQ=255) tGGAACTGGTGCGGGAGATGATGGGGGAGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGaaaaaa                                                                                                                                             >  1:996673/1‑140 (MQ=255)    aaCTGGTGCGGGAGATGATGGGGGAGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAACCt                                                                                                                                          <  2:984980/140‑1 (MQ=255)      cTGGTGCGGGAGATGATGGGGGAGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAACCTGc                                                                                                                                        <  2:996673/140‑1 (MQ=255)        ggTGCGGGAGATGATGGGGGAGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAACCTGCAc                                                                                                                                      <  1:583746/140‑1 (MQ=255)        ggTGCGGGAGATGATGGGGGAGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAACCTGCAc                                                                                                                                      <  1:211800/140‑1 (MQ=255)               gagaTGATGGGGGAGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAACCTGCACGGGTGAc                                                                                                                               >  1:96410/1‑140 (MQ=255)                     gtgGGGGAGCAGAGATAACCGTGATGAAACTGCTAAAGGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTAAAACCCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAACCCTGCACGGGTGACCCGCCa                                                                                                                         <  2:484380/139‑1 (MQ=255)                     atgGGGGAGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAACCCTCTCTGGAAGAGGCTGTCGAGATAAAACAAGTTTTAAAAAACCCTGCACGGGTGACCCGCCa                                                                                                                         <  2:635968/140‑1 (MQ=255)                       gggggAGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAACCCTGCACGGGTGCCCCGCCACg                                                                                                                       <  1:1182957/140‑1 (MQ=255)                           gAGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAACCTGCACGGGTGACCCGCCACGAAAt                                                                                                                   >  2:300639/1‑140 (MQ=255)                            aGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAACCCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAACCCTGCACGGGTGCCCCGCCACGAAAtt                                                                                                                  <  1:35507/140‑1 (MQ=255)                            aGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAACCTGCACGGGTGACCCg                                                                                                                            >  2:283103/1‑130 (MQ=255)                            aGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAACCTGCACGGGTGACCCg                                                                                                                            <  1:283103/130‑1 (MQ=255)                               agagATAACCGTGATAAAACTGCTAAAAGGCGAGGTAAAAAATGATTTTTTTTGATGATTTAAAACCCTCTCTGGAAGAGGCTGTCGAGATAAAACAAGTTTTAAAAAACCCTGCGCGGGTGACCCGCCACGAAATTGAg                                                                                                               <  2:1414090/140‑1 (MQ=255)                               agagAAAACCGTGATAAAACTCCTCAAAGGCGGGGTAAAAAAGGATTTTTTTTGATGAGTTAAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTAAAAAACCCTGCAGGGGTGACCCGCCACGAAATTGAg                                                                                                               <  2:714796/140‑1 (MQ=255)                                gagaTAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAACCTGCACGGGTGACCCGCCACGAAATTGAgg                                                                                                              >  2:56754/1‑140 (MQ=255)                                      aCCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAACCCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAACCTGCACGGGTGACCCGCCACGAAATTGAg                                                                                                               <  2:966982/133‑1 (MQ=255)                                      aCCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAACCTGCACGGGTGACCCGCCACGAAATTGAg                                                                                                               >  1:966982/1‑133 (MQ=255)                                      aCCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAACCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTa                                                                                                        >  1:714796/1‑140 (MQ=255)                                         gTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTAAAACCCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAACCCTGCACGGGTGCCCCGCCACGAAATTGAGGATGCTAAgg                                                                                                     <  1:1448246/140‑1 (MQ=255)                                          agatgaAACTGCTAAAGGGCAAGATAAAAAATGATTTTTTTTGATAAGTTAAAACCCTCTCGGGAAGCGGCTGACGAGATTAAACAGGGTTCAAAAAACCCTGCGCGGGTAACCCGCCACGAAATTGAGGATGCTAAGGc                                                                                                    <  2:323022/139‑1 (MQ=255)                                           gatgaAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAACCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCt                                                                                                   >  1:637224/1‑140 (MQ=255)                                             tgaAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAACCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCtgt                                                                                                 >  2:1437766/1‑140 (MQ=255)                                                     cTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAACCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGAcc                                                                                         >  1:423604/1‑140 (MQ=255)                                                     cTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAACCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGAcc                                                                                         >  1:516068/1‑140 (MQ=255)                                                      caaaaGGCGAGGTAAAAAATGAGTTTTTTTGATGAGTTAAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTAAAAAAACCTGCAGGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCg                                                                                        <  2:96410/138‑1 (MQ=255)                                                       cAAGGGCGAGGTATAAAATGATTTTTTTTGATGAGTTAAAACCCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGTTTTGAAAAACCCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGAAGACCgg                                                                                       <  2:118866/140‑1 (MQ=255)                                                               aGGTACAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAACCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGgtg                                                                               >  1:964434/1‑140 (MQ=255)                                                                 gTAAAAAATGAGTTTTTTTGATGAGTTAAAACCCTCTCTGGAAGAGGCTGTCGAGATAAAAAAAGTTTTAAAAAACCCTGCAGGGGTGCCCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGtt                                                                             <  2:637224/140‑1 (MQ=255)                                                                           aGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAACCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCAt                                                                   >  2:464274/1‑140 (MQ=255)                                                                           aGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAACCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCAt                                                                   >  2:560174/1‑140 (MQ=255)                                                                            gTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAACCTGCACGGTTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATc                                                                  >  1:1277383/1‑140 (MQ=255)                                                                                ttttGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAACCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGc                                                              >  1:1229166/1‑140 (MQ=255)                                                                                   tgatgaTTTAAAACCCCTTCTGGAAGAGGCTGTCGAAATAAAAAAAGTTTTAAAAAACCCTGCAGGGGTGCCCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCAtt                                                           <  2:423604/140‑1 (MQ=255)                                                                                      tgaGTTAAAACCCTCTCGGGAAGAGGCTGTCGAAATTAAACAAGGTTTAAAAAACCCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCgg                                                        <  2:516068/140‑1 (MQ=255)                                                                                              aaccccctctGAAAGAGGCTGTCGAGATAAAAAAAGTTTTAAAAAACCCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAAt                                                <  2:1083220/134‑1 (MQ=255)                                                                                                    ctctGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAACCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGa                                          >  1:1083220/1‑140 (MQ=255)                                                                                                    ctctGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAACCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGa                                          >  2:384794/1‑140 (MQ=255)                                                                                                    ctctGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAACCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGa                                          >  2:394311/1‑140 (MQ=255)                                                                                                    ctctGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAACCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGa                                          >  1:783120/1‑140 (MQ=255)                                                                                                       gggAAGAGGCTGTCGAGATAAAACAAGGTTGAAAAAACCCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGc                                       <  1:56754/139‑1 (MQ=255)                                                                                                           agagGCTGTCGAGATTAAACAAGGTTTGAAAAAACCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACg                                   >  2:1085254/1‑140 (MQ=255)                                                                                                            gagGCTGTCGAGATTAAACAAGGTTTGAAAAAACCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGc                                  >  1:603844/1‑140 (MQ=255)                                                                                                              ggCTGTGGAGATAAAACAGGGTTGGAAAAACCCTGCAGGGGGGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCACGATGCCTGATGCgccacgt                                <  1:642326/140‑7 (MQ=25)                                                                                                               gCTGTCGAGATTAAACAAGGTTTGAAAAAACCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTa                               >  1:1241228/1‑140 (MQ=255)                                                                                                               gCTGTCGAGATTAAACAAGGTTTGAAAAAACCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTa                               >  1:721130/1‑140 (MQ=255)                                                                                                                cTGTCGAGATAAAACAAGGTTAAAAAAACCCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTAc                              <  1:1186907/140‑1 (MQ=255)                                                                                                                cTGTCGAAATTAAACAGGTTTTAAAAAACCCGGCCGGGGTCCCCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTAc                              <  2:603844/140‑1 (MQ=37)                                                                                                                 tGTCGAGATTAAACAAGGTTTGAAAAAACCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTAcc                             >  1:432070/1‑140 (MQ=255)                                                                                                                   tCGAGATTAAACAAGGTTTGAAAAAACCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACcgc                           >  2:20717/1‑140 (MQ=255)                                                                                                                    cGAGATTAAACAAGGTTTGAAAAAACCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACcgcg                          >  2:850921/1‑140 (MQ=255)                                                                                                                          aaaaCAAGTTTTAAAAAACCCTGCACGGGTGCCCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTAt                    <  2:1229166/139‑1 (MQ=255)                                                                                                                             aCAAGGTTTGAAAAAACCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTATCAg                 >  1:1438232/1‑140 (MQ=255)                                                                                                                                agttttAAAAAACCCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTATCAGGcc              <  1:1185699/137‑1 (MQ=255)                                                                                                                                aGGTTTAAAAAACCCTGCAGGGGTGCCCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTATCAGGcc              <  1:793309/140‑1 (MQ=255)                                                                                                                                aGGTTGGAAAAACCCTGCCGGGGTGCCCCGCCACGAAATTGAGGATGCTAAGGCTGTTGGAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTATCAGGcc              <  2:1438232/140‑1 (MQ=37)                                                                                                                                 ggTTTGAAAAACCCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTATCAGGCCt             <  1:464274/140‑1 (MQ=255)                                                                                                                                 ggTTTGAAAAAACCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTATCAGGCCt             >  2:382826/1‑140 (MQ=255)                                                                                                                                 ggTTTGAAAAAACCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTATCAGGCCt             >  1:298930/1‑140 (MQ=255)                                                                                                                                  tttaaaaaaacCCTGCCGGGGTGCCCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTATCAGGCCTa            <  1:1437766/135‑1 (MQ=37)                                                                                                                                  gTTTGAAAAAACCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTATCAGGCCTa            >  2:960502/1‑140 (MQ=255)                                                                                                                                  gTTTAAAAAACCCTGCAGGGGTGCCCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTATCAGGCCTa            <  1:1309019/140‑1 (MQ=255)                                                                                                                                     tGAAAAAACCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTATCAGGCCTACAg         >  2:1338344/1‑140 (MQ=255)                                                                                                                                      gAAAAAACCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTATCAGGCCTACAGt        >  1:1155190/1‑140 (MQ=255)                                                                                                                                            aCCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTATCAGGCCTACAGTTTTACa  <  1:384794/140‑1 (MQ=255)                                                                                                                                            aCCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTATCAGGCCTACAGTTTTACa  >  2:865740/1‑140 (MQ=255)                                                                                                                                            |                                                                                                                                            TGGAACTGGTGCGGGAGATGATGGGGGAGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAACCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTATCAGGCCTACAGTTTTACA  >  NC_000913/4628510‑4628788

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑