BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,850,546	G→A	intergenic (‑111/‑101)	hycA ← / → hypA	regulator of the transcriptional regulator FhlA/hydrogenase 3 nickel incorporation protein HypA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,850,546	0	G	A	100.0%	473.2 / NA	131	intergenic (‑111/‑101)	hycA/hypA	regulator of the transcriptional regulator FhlA/hydrogenase 3 nickel incorporation protein HypA
Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (61/70); total (61/70)

Only 100 of 131 total aligned reads displayed.

TTTCTCGCTTATTTCCCAAATAGTCATTGTCAGGTTACCCGTTTAACAGAGATGCCAGCTTTAAGCATTTTTTGTGCCAACTTTTAATTTATTGTTATTAAAGAGATTTTTAAGCTAAAGATGAATTTCGTCGCCGTGTCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCTGCCAACGGGCACT  >  NC_000913/2850409‑2850678

tttCTCGCTTATTTCCCAAATAGTCATTGTCAGGTTACCCGTTTAACAGAGATGCCAGCTTTAAGCATTTTTTGTGCCAACTTTTAATTTATTGTTATTAAAGAGATTTTTAAGCTAAAGATGAATTTCGTCGCCGTATc                                                                                                                                    >  1:1422310/1‑140 (MQ=255)

 ttCTCGCTTATTTCCCAAATAGTCATTGTCAGGTTACCCGTTTAACAGAGATGCCAGCTTTAAGCATTTTTTGTGCCAACTTTTAATTTATTGTTATTAAAGAGATTTTTAAGCTAAAGATGAATTTCGTCGCCGTATCg                                                                                                                                   <  1:2049056/140‑1 (MQ=255)

 ttCTCGCTTATTTCCCAAATAGTCATTGTCAGGTTACCCGTTTAACAGAGATGCCAGCTTTAAGCATTTTTTGTGCCAACTTTTAATTTATTGTTATTAAAGAGATTTTTAAGCTAAAGATGAATTTCGTCGCCGTATCg                                                                                                                                   <  1:1577510/140‑1 (MQ=255)

  tctcGCTTATTTCCCAAATAGTCATTGTCAGGTTACCCGTTTAACAGAGATGCCAGCTTTAAGCATTTTTTGTGCCAACTTTTAATTTATTGTTATTAAAGAGATTTTTAAGCTAAAGATGAATTTCGTCGCCGTATCGa                                                                                                                                  >  1:567886/1‑140 (MQ=255)

     cGCTTATTTCCCAAATAGTCATTGTCAGGTTACCCGTTTAACAGAGATGCCAGCTTTAAGCATTTTTTGTGCCAACTTTTAATTTATTGTTATTAAAGAGATTTTTAAGCTAAAGATGAATTTCGTCGCCGTATCGACgt                                                                                                                               <  1:1210623/140‑1 (MQ=255)

      gCTTATTTCCCAAATAGTCATTGTCAGGTTACCCGTTTAACAGAGATGCCAGCTTTAAGCATTTTTTGTGCCAACTTTTAATTTATTGTTATTAAAGAGATTTTTAAGCTAAAGATGAATTTCGTCGCCGTATCGACgtg                                                                                                                              <  2:184343/140‑1 (MQ=255)

       cTTATTTCCCAAATAGTCATTGTCAGGTTACCCGTTTAACAGAGATGCCAGCTTTAAGCATTTTTTGTGCCAACTTTTAATTTATTGTTATTAAAGAGATTTTTAAGCTAAAGATGAATTTCGTCGCCGTATCGACgtgt                                                                                                                             <  1:1461187/140‑1 (MQ=255)

         tATTCCCCAAATAGTCATTGTCAGGTTACCCGTTTAACAGAGATGCCAGCTTTAAGCATTTTTTGTGCCAACTTTTAATTTATTGTTATTAAAGAGATTTTTAAGCTAAAGATGAATTTCGTCGCCGTATCGACgtg                                                                                                                              >  2:380815/1‑137 (MQ=255)

            ttCCCAAATAGTCATTGTCAGGTTACCCGTTTAACAGAGATGCCAGCTTTAAGCATTTTTTGTGCCAACTTTTAATTTATTGTTATTAAAGAGATTTTTAAGCTAAAGATGAATTTCGTCGCCGTATCGACGTGTCAttt                                                                                                                        <  2:567886/140‑1 (MQ=255)

              cccAAATAGTCATTGTCAGGTTACCCGTTTAACAGAGATGCCAGCTTTAAGCATTTTTTGTGCCAACTTTTAATTTATTGTTATTAAAGAGATTTTTAAGCTAAAGATGAATTTCGTCGCCGTATCGACgt                                                                                                                               <  1:152604/131‑1 (MQ=255)

              cccAAATAGTCATTGTCAGGTTACCCGTTTAACAGAGATGCCAGCTTTAAGCATTTTTTGTGCCAACTTTTAATTTATTGTTATTAAAGAGATTTTTAAGCTAAAGATGAATTTCGTCGCCGTATCGACgt                                                                                                                               >  2:152604/1‑131 (MQ=255)

              cccAAATAGTCATTGTCAGGTTACCCGTTTAACAGAGATGCCAGCTTTAAGCATTTTTTGTGCCAACTTTTAATTTATTGTTATTAAAGAGATTTTTAAGCTAAAGATGAATTTCGTCGCCGTATCGACGTGTCATTTCg                                                                                                                      <  2:608715/140‑1 (MQ=255)

              cccAAATAGTCATTGTCAGGTTACCCGTTTAACAGAGATGCCAGCTTTAAGCATTTTTTGTGCCAACTTTTAATTTATTGTTATTAAAGAGATTTTTAAGCTAAAGATGAATTTCGTCGCCGTATCGACGTGTCATTTCg                                                                                                                      >  2:1068612/1‑140 (MQ=255)

              cccAAATAGTCATTGTCAGGTTACCCGTTTAACAGAGATGCCAGCTTTAAGCATTTTTTGTGCCAACTTTTAATTTATTGTTATTAAAGAGATTTTTAAGCTAAAGATGAATTTCGTCGCCGTATCGACGTGTCATTTCg                                                                                                                      <  1:522798/140‑1 (MQ=255)

                cAAATAGTCATTGTCAGGTTACCCGTTTAACAGAGATGCCAGCTTTAAGCATTTTTTGTGCCAACTTTTAATTTATTGTTATTAAAGAGATTTTTAAGCTAAAGATGAATTTCGTCGCCGTATCGACGTGTCATTTCGAc                                                                                                                    <  2:311647/140‑1 (MQ=255)

                  aaTAGTCATTGTCAGGTTACCCGTTTAACAGAGATGCCAGCTTTAAGCATTTTTTGTGCCAACTTTTAATTTATTGTTATTAAAGAGATTTTTAAGCTAAAGATGAATTTCGTCGCCGTATCGACGTGTCATTTCGAcat                                                                                                                  >  2:195567/1‑140 (MQ=255)

                  aaTAGTCATTGTCAGGTTACCAGTTTAACAGAGATGCCAGCTTTAAGCATTTTTTGTGCCAACTTTTAATTTATTGTTATTAAAGAGATTTTTAAGCTAAAGATGAATTTCGTCGCCGTATCGACGTGTCATTTCGAcat                                                                                                                  >  1:1366476/1‑140 (MQ=255)

                     aGTCATTGTCAGGTTACCCGTTTAACAGAGATGCCAGCTTTAAGCATTTTTTGTGCCAACTTTTAATTTATTGTTATTAAAGAGATTTTTAAGCTAAAGATGAATTTCGTCGCCGTATCGACGTGTCATTTCGAcatcat                                                                                                               <  2:1422310/140‑1 (MQ=255)

                     aGTCATTGTCAGGTTACCCGTTTAACAGAGATGCCAGCTTTAAGCATTTTTTGTGCCAACTTTTAATTTATTGTTATTAAAGAGATTTTTAAGCTAAAGATGAATTTCGTCGCCGTATCGACGTGTCATTTCGAcatcat                                                                                                               <  2:1501276/140‑1 (MQ=255)

                      gTCATTGTCAGGTTACCCGTTTAACAGAGATGCCAGCTTTAAGCATTTTTTGTGCCAACTTTTAATTTATTGTTATTAAAGAGATTTTTAAGCTAAAGATGAATTTCGTCGCCGTATCGACGTGTCATTTCGACatcatc                                                                                                              >  1:989546/1‑140 (MQ=255)

                              cAGGTTACCCGTTTAACAGAGATGCCAGCTTTAAGCATTTTTTGTGCCAACTTTTAATTTATTGTTATTAAAGAGATTTTTAAGCTAAAGATGAATTTCGTCGCCGTATCGACGTGTCATTTCGACATCATCGACattat                                                                                                      >  1:2258554/1‑140 (MQ=255)

                               aGGTTACCCGTTTAACAGAGATGCCAGCTTTAAGCATTTTTTGTGCCAACTTTTAATTTATTGTTATTAAAGAGATTTTTAAGCTAAAGATGAATTTCGTCGCCGTATCGACGTGTCATTTCGACATCATCGACattatt                                                                                                     <  2:1647963/140‑1 (MQ=255)

                               aGGTTACCCGTTTAACAGAGATGCCAGCTTTAAGCATTTTTTGTGCCAACTTTTAATTTATTGTTATTAAAGAGATTTTTAAGCTAAAGATGAATTTCGTCGCCGTATCGACGTGTCATTTCGACATCATCGACattatt                                                                                                     <  2:725791/140‑1 (MQ=255)

                               aGGTTACCCGTTTAACAGAGATGCCAGCTTTAAGCATTTTTTGTGCCAACTTTTAATTTATTGTTATTAAAGAGATTTTTAAGCTAAAGATGAATTTCGTCGCCGTATCGACGTGTCATTTCGACATCATCGACattatt                                                                                                     <  2:2399097/140‑1 (MQ=255)

                                     cccGTTTAACAGAGATGCCAGCTTTAAGCATTTTTTGTGCCAACTTTTAATTTATTGTTATTAAAGAGATTTTTAAGCTAAAGATGAATTTCGTCGCCGTATCGACGTGTCATTTCGACATCATCGACATTATTCACCGc                                                                                               >  1:1367478/1‑140 (MQ=255)

                                     cccGTTTAACAGAGATGCCAGCTTTAAGCATTTTTTGTGCCAACTTTTAATTTATTGTTATTAAAGAGATTTTTAAGCTAAAGATGAATTTCGTCGCCGTATCGACGTGTCATTTCGACATCATCGACATTATTCACCGc                                                                                               >  2:1288557/1‑140 (MQ=255)

                                       cGTTTAACAGAGATGCCAGCTTTAAGCATTTTTTGTGCCAACTTTTAATTTATTGTTATTAAAGAGATTTTTAAGCTAAAGATGAATTTCGTCGCCGTATCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAg                                                                                             <  1:1593220/140‑1 (MQ=255)

                                       cGTTTAACAGAGATGCCAGCTTTAAGCATTTTTTGTGCCAACTTTTAATTTATTGTTATTAAAGAGATTTTTAAGCTAAAGATGAATTTCGTCGCCGTATCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAg                                                                                             <  1:1895455/140‑1 (MQ=255)

                                        gTTTAACAGAGATGCCAGCTTTAAGCATTTTTTGTGCCAACTTTTAATTTATTGTTATTAAAGAGATTTTTAAGCTAAAGATGAATTTCGTCGCCGTATCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAgg                                                                                            <  2:2258554/140‑1 (MQ=255)

                                         tttAACAGAGATGCCAGCTTTAAGCATTTTTTGTGCCAACTTTTAATTTATTGTTATTAAAGAGATTTTTAAGCTAAAGATGAATTTCGTCGCCGTATCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAggg                                                                                           <  2:1364587/140‑1 (MQ=255)

                                           tAACAGAGATGCCAGCTTTAAGCATTTTTTGTGCCAACTTTTAATTTATTGTTATTAAAGAGATTTTTAAGCTAAAGATGAATTTCGTCGCCGTATCGACGTGTCATTTCGACATCATCGACATTATTCACCg                                                                                                >  1:1830065/1‑133 (MQ=255)

                                                   aTGCCAGCTTTAAGCATTTTTTGTGCCAACTTTTAATTTATTGTTATTAAAGAGATTTTTAAGCTAAAGATGAATTTCGTCGCCGTATCGACGTGTCATTTCGACATCATCGACATTATTCACCg                                                                                                >  1:807513/1‑125 (MQ=255)

                                                   aTGCCAGCTTTAAGCATTTTTTGTGCCAACTTTTAATTTATTGTTATTAAAGAGATTTTTAAGCTAAAGATGAATTTCGTCGCCGTATCGACGTGTCATTTCGACATCATCGACATTATTCACCg                                                                                                <  2:807513/125‑1 (MQ=255)

                                                   aTGCCAGCTTTAAGCATTTTTTGTGCCAACTTTTAATTTATTGTTATTAAAGAGATTTTTAAGCTAAAGATGAATTTCGTCGCCGTATCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAggg                                                                                           <  1:1568513/130‑1 (MQ=255)

                                                   aTGCCAGCTTTAAGCATTTTTTGTGCCAACTTTTAATTTATTGTTATTAAAGAGATTTTTAAGCTAAAGATGAATTTCGTCGCCGTATCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAggg                                                                                           >  2:1568513/1‑130 (MQ=255)

                                                   aTGCCAGCTTTAAGCATTTTTTGTGCCAACTTTTAATTTATTGTTATTAAAGAGATTTTTAAGCTAAAGATGAATTTCGTCGCCGTATCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAaca                                                                                 >  1:1575969/1‑140 (MQ=255)

                                                   aTGCCAGCTTTAAGCATTTTTTGTGCCAACTTTTAATTTATTGTTATTAAAGAGATTTTTAAGCTAAAGATGAATTTCGTCGCCGTATCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAaca                                                                                 >  1:1514959/1‑140 (MQ=255)

                                                    tGCCAGCTTTAAGCATTTTTTGTGCCAACTTTTAATTTATTGTTATTAAAGAGATTTTTAAGCTAAAGATGAATTTCGTCGCCGTATCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAaca                                                                                 >  2:1441201/1‑139 (MQ=255)

                                                      ccAGCTTTAAGCATTTTTTGTGCCAACTTTTAATTTATTGTTATTAAAGAGATTTTTAAGCTAAAGATGAATTTCGTCGCCGTATCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTg                                                                              >  1:1997745/1‑140 (MQ=255)

                                                      ccAGCTTTAAGCATTTTTTGTGCCAACTTTTAATTTATTGTTATTAAAGAGATTTTTAAGCTAAAGATGAATTTCGTCGCCGTATCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTg                                                                              >  2:1254002/1‑140 (MQ=255)

                                                       cAGCTTTAAGCATTTTTTGTGCCAACTTTTAATTTATTGTTATTAAAGAGATTTTTAAGCTAAAGATGAATTTCGTCGCCGTATCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTgg                                                                             <  2:130252/140‑1 (MQ=255)

                                                       cAGCTTTAAGCATTTTTTGTGCCAACTTTTAATTTATTGTTATTAAAGAGATTTTTAAGCTAAAGATGAATTTCGTCGCCGTATCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTgg                                                                             <  2:1575969/140‑1 (MQ=255)

                                                       cAGCTTTAAGCATTTTTTGTGCCAACTTTTAATTTATTGTTATTAAAGAGATTTTTAAGCTAAAGATGAATTTCGTCGCCGTATCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTgg                                                                             >  2:1641501/1‑140 (MQ=255)

                                                       cAGCTTTAAGCATTTTTTGTGCCAACTTTTAATTTATTGTTATTAAAGAGATTTTTAAGCTAAAGATGAATTTCGTCGCCGTATCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTgg                                                                             <  1:1641501/140‑1 (MQ=255)

                                                         gCTTTAAGCATTTTTTGTGCCAACTTTTAATTTATTGTTATTAAAGAGATTTTTAAGCTAAAGATGAATTTCGTCGCCGTATCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGca                                                                           <  1:1517268/140‑1 (MQ=255)

                                                         gCTTTAAGCATTTTTTGTGCCAACTTTTAATTTATTGTTATTAAAGAGATTTTTAAGCTAAAGATGAATTTCGTCGCCGTATCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGca                                                                           >  1:280938/1‑140 (MQ=255)

                                                           tttAAGCATTTTTTGTGCCGACTTTTAATTTATTGTTATTAAAGAGATTTTTAAGCTAAAGATGAATTTCGTCGCCGTATCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGcaca                                                                         >  1:444678/1‑140 (MQ=255)

                                                           tttAAGCATTTTTTGTGCCAACTTTTAATTTATTGTTATTAAAGAGATTTTTAAGCTAAAGATGAATTTCGTCGCCGTATCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAggg                                                                                           <  1:374337/122‑1 (MQ=255)

                                                           tttAAGCATTTTTTGTGCCAACTTTTAATTTATTGTTATTAAAGAGATTTTTAAGCTAAAGATGAATTTCGTCGCCGTATCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAggg                                                                                           >  2:374337/1‑122 (MQ=255)

                                                           tttAAGCATTTTTTGTGCCAACTTTTAATTTATTGTTATTAAAGAGATTTTTAAGCTAAAGATGAATTTCGTCGCCGTATCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGcaca                                                                         >  1:377224/1‑140 (MQ=255)

                                                             tAAGCATTTTTTGTGCCAACTTTTAATTTATTGTTATTAAAGAGATTTTTAAGCTAAAGATGAATTTCGTCGCCGTATCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGCACAat                                                                       >  1:208685/1‑140 (MQ=255)

                                                             tAAGCATTTTTTGTGCCAACTTTTAATTTATTGTTATTAAAGAGATTTTTAAGCTAAAGATGAATTTCGTCGCCGTATCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGCACAat                                                                       >  1:499738/1‑140 (MQ=255)

                                                               aGCATTTTTTGTGCCAACTTTTAATTTATTGTTATTAAAGAGATTTTTAAGCTAAAGATGAATTTCGTCGCCGTATCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGca                                                                           >  1:1286173/1‑134 (MQ=255)

                                                               aGCATTTTTTGTGCCAACTTTTAATTTATTGTTATTAAAGAGATTTTTAAGCTAAAGATGAATTTCGTCGCCGTATCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGca                                                                           <  2:1286173/134‑1 (MQ=255)

                                                               aGCATTTTTTGTGCCAACTTTTAATTTATTGTTATTAAAGAGATTTTTAAGCTAAAGATGAATTTCGTCGCCGTATCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGCACAatta                                                                     <  2:280938/140‑1 (MQ=255)

                                                               aGCATTTTTTGTGCCAACTTTTAATTTATTGTTATTAAAGAGATTTTTAAGCTAAAGATGAATTTCGTCACCGTATCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGCACAatta                                                                     <  2:1585285/140‑1 (MQ=255)

                                                                    tttttGTGCCAACTTTTAATTTATTGTTATTAAAGAGATTTTTAAGCTAAAGATGAATTTCGTCGCCGTATCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGCACAatta                                                                     <  2:1539922/135‑1 (MQ=255)

                                                                    tttttGTGCCAACTTTTAATTTATTGTTATTAAAGAGATTTTTAAGCTAAAGATGAATTTCGTCGCCGTATCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGCACAatta                                                                     >  1:1539922/1‑135 (MQ=255)

                                                                           gCCAACTTTTAATTTATTGTTATTAAAGAGATTTTTAAGCTAAAGATGAATTTCGTCGCCGTATCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCt                                                         >  1:1495072/1‑140 (MQ=255)

                                                                            ccAACTTTTAATTTATTGTTATTAAAGAGATTTTTAAGCTAAAGATGAATTTCGTCGCCGTATCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGCACAatta                                                                     >  1:1877573/1‑127 (MQ=255)

                                                                            ccAACTTTTAATTTATTGTTATTAAAGAGATTTTTAAGCTAAAGATGAATTTCGTCGCCGTATCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGCACAatta                                                                     <  2:1877573/127‑1 (MQ=255)

                                                                            ccAACTTTTAATTTATTGTTATTAAAGAGATTTTTAAGCTAAAGATGAATTTCGTCGCCGTATCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTg                                                        >  2:2142217/1‑140 (MQ=255)

                                                                            ccAACTTTTAATTTATTGTTATTAAAGAGATTTTTAAGCTAAAGATGAATTTCGTCGCCGTATCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTg                                                        <  1:1629233/140‑1 (MQ=255)

                                                                               aCTTTTAATTTATTGTTATTAAAGAGATTTTTAAGCTAAAGATGAATTTCGTCGCCGTATCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCa                                                     <  2:1997745/140‑1 (MQ=255)

                                                                                cTTTTAATTTATTGTTATTAAAGAGATTTTTAAGCTAAAGATGAATTTCGTCGCCGTATCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAGGGTTAATCAACACTGGCACAATTATTGCTTGTAGCTGGCaa                                                    <  2:989546/140‑1 (MQ=255)

                                                                                cTTTTAATTTATTGTTATTAAAGAGATTTTTAAGCTAAAGATGAATTTCGTCGCCGTATCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCaa                                                    <  2:1830931/140‑1 (MQ=255)

                                                                                      aTTTATTGTTATTAAAGAGATTTTTAAGCTAAAGATGAATTTCGTCGCCGTATCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTa                                              <  2:171860/140‑1 (MQ=255)

                                                                                      aTTTATTGTTATTAAAGAGATTTTTAAGCTAAAGATGAATTTCGTCGCCGTATCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTa                                              <  1:363446/140‑1 (MQ=255)

                                                                                          aTTGTTATTAAAGAGATTTTTAAGCTAAAGATGAATTTCGTCGCCGTATCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATgg                                          >  1:1190405/1‑140 (MQ=255)

                                                                                           ttGTTATTAAAGAGATTTTTAAGCTAAAGATGAATTTCGTCGCCGTATCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATggg                                         >  1:648041/1‑140 (MQ=255)

                                                                                           ttGTTATTAAAGAGATTTTTAAGCTAAAGATGAATTTCGTCGCCGTATCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATggg                                         >  2:1203739/1‑140 (MQ=255)

                                                                                           ttGTTATTAAAGAGATTTTTAAGCTAAAGATGAATTTCGTCGCCGTATCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATggg                                         >  1:1823433/1‑140 (MQ=255)

                                                                                                attaAAGAGATTTTTAAGCTAAAGATGAATTTCGTCGCCGTATCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCg                                    >  1:37549/1‑140 (MQ=255)

                                                                                                     agagATTTTTAAGCTAAAGATGAATTTCGTCGCCGTATCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATg                               <  1:219930/140‑1 (MQ=255)

                                                                                                       agaTTTTTAAGCTAAAGATGAATTTCGTCGCCGTATCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCa                             <  2:1366476/140‑1 (MQ=255)

                                                                                                       agaTTTTTAAGCTAAAGATGAATTTCGTCGCCGTATCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCa                             <  1:1299930/140‑1 (MQ=255)

                                                                                                       agaTTTTTAAGCTAAAGATGAATTTCGTCGCCGTATCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCa                             <  2:55176/140‑1 (MQ=255)

                                                                                                       agaTTTTTAAGCTAAAGATGAATTTCGTCGCCGTATCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCa                             <  2:37549/140‑1 (MQ=255)

                                                                                                       agaTTTTTAAGCTAAAGATGAATTTCGTCGCCGTATCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCa                             <  1:2142217/140‑1 (MQ=255)

                                                                                                        gaTTTTTAAGCTAAAGATGAATTTCGTCGCCGTATCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAgg                                      <  1:1064365/130‑1 (MQ=255)

                                                                                                        gaTTTTTAAGCTAAAGATGAATTTCGTCGCCGTATCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAgg                                      >  2:1064365/1‑130 (MQ=255)

                                                                                                        gaTTTTTAAGCTAAAGATGAATTTCGTCGCCGTATCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCAc                            >  2:1949009/1‑140 (MQ=255)

                                                                                                         aTTTTTAAGCTAAAGATGAATTTCGTCGCCGTATCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGat                                  >  2:202150/1‑133 (MQ=255)

                                                                                                         aTTTTTAAGCTAAAGATGAATTTCGTCGCCGTATCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGat                                  <  1:202150/133‑1 (MQ=255)

                                                                                                         aTTTTTAAGCTAAAGATGAATTTCGTCGCCGTATCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACg                           >  2:1943655/1‑140 (MQ=255)

                                                                                                          tttttAAGCTAAAGATGAATTTCGTCGCCGTATCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCa                             <  2:2022444/137‑1 (MQ=255)

                                                                                                           ttttAAGCTAAAGATGAATTTCGTCGCCGTATCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGaa                         >  1:33079/1‑140 (MQ=255)

                                                                                                            tttAAGCTAAAGATGAATTTCGTCGCCGTATCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGaaa                        >  1:375791/1‑140 (MQ=255)

                                                                                                             ttAAGCTAAAGATGAATTTCGTCGCCGTATCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAAt                       <  1:1949009/140‑1 (MQ=255)

                                                                                                             ttAAGCTAAAGATGAATTTCGTCGCCGTATCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAAt                       >  1:1727169/1‑140 (MQ=255)

                                                                                                                   tAAAGATGAATTTCGTCGCCGTATCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCct                 <  2:1727169/140‑1 (MQ=255)

                                                                                                                           aaTTTCGTCGCCGTATCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCTGCCAAc         >  2:306545/1‑140 (MQ=255)

                                                                                                                            aTTTCGTCGCCGTATCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCTGCCAACg        <  1:1943655/140‑1 (MQ=255)

                                                                                                                               tcgtcgCCGTATCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCTGCCAACGGGc     >  1:2018264/1‑140 (MQ=255)

                                                                                                                                cgtcgCCGTATCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCTGCCAACGGGCa    <  1:1288557/140‑1 (MQ=255)

                                                                                                                                 gtcgCCGTATCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCTGCCAACGGGCAc   >  2:1547140/1‑140 (MQ=255)

                                                                                                                                  tcgCCGTATCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCTGCCAACg        >  2:2284155/1‑134 (MQ=255)

                                                                                                                                  tcgCCGTATCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCTGCCAACg        <  1:2284155/134‑1 (MQ=255)

                                                                                                                                  tcgCCGTATCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCTGCCAACGGGCACt  >  1:1031676/1‑140 (MQ=255)

                                                                                                                                  tcgCCGTATCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCTGCCAACGGGCACt  >  1:1441795/1‑140 (MQ=255)

TTTCTCGCTTATTTCCCAAATAGTCATTGTCAGGTTACCCGTTTAACAGAGATGCCAGCTTTAAGCATTTTTTGTGCCAACTTTTAATTTATTGTTATTAAAGAGATTTTTAAGCTAAAGATGAATTTCGTCGCCGTGTCGACGTGTCATTTCGACATCATCGACATTATTCACCGCAGGGATAATCAACACTGGCACAATTATTGCTTGTAGCTGGCAATAGTTAATGGGAGGCGATATGCACGAAATAACCCTCTGCCAACGGGCACT  >  NC_000913/2850409‑2850678

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`