| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,580,492 | 0 | G | T | 25.5% | 242.9 / 73.3 | 98 | A105E (GCG→GAG) | yhhX | putative oxidoreductase YhhX |
| Reads supporting (aligned to +/- strand): ref base G (36/37); new base T (11/14); total (47/51) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.17e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.96e-01 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
CTTTCCACTTCAACAATCTCTCCCAACTTGCCACTTTCAATCGCTTTTTTCGCTGTCAGGAAGCAGGAGTCAAAGCGACGATTCTGATACGGCGTGACGGTCAGCCCTTTGCTTTTCGCCAACGCAAACAGCTCTTTCGCCTGCGCAAGTGTCGGAGTGAACGGTTTTTCGACCAGCACATTTTTCCCGGCTTCCAGCGCGCGTTTCGCGTACTCGAAATGGCTGTCCGCGTGGGTGCAGACAACAACCAGCTTAACATCGGGATCGTTTAGTAC > NC_000913/3580354‑3580628 | cTTTCCACTTCAACAATCTCTCCCAACTTGCCACTTTCAATCGCTTTTTTCGCTGTCAGGAAGCAGGAGTCAAAGCGACGATTCTGATACGGCGTGACGGTCAGCCCTTTGCTTTTCGCCAACGCAAACAGCTCTTTCGc > 2:898963/1‑140 (MQ=255) tttCCACTTCAACAATCTCTCCCAACTTGCCACTTTCAATCGCTTTTTTCGCTGTCAGGAAGCAGGAGTCAAAGCGACGATTCTGATACGGCGTGACGGTCAGCCCTTTGCTTTTCGCCAACGCAAACAGCTCTTTCGcc > 1:196265/1‑140 (MQ=255) ttCCACTTCAACAATCTCTCCCAACTTGCCACTTTCAATCGCTTTTTTCGCTGTCAGGAAGCAGGAGTCAAAGCGACGATTCTGATACGGCGTGACGGTCAGCCCTTTGCTTTTCGCCAACGCAAACAGCTCTTTCTCCt < 2:344480/140‑1 (MQ=255) tCCACTTCAACAATCTCTCCCAACTTGCCACTTTCAATCGCTTTTTTCGCTGTCAGGAAGCAGGAGTCAAAGCGACGATTCTGATACGGCGTGACGGTCAGCCCTTTGCTTTTCGCCAACGCAAACAGCTCTTTCGCCTg > 2:1267098/1‑140 (MQ=255) ccTTCAACAATCTCTCCCAACTTGCCACTTTCAATCGCTTTTTTCGCTGTCAGGAAGCAGGAGTCAAAGCGACGATTCTGATACGGCGTGACGGTCAGCCCTTTGCTTTTCGCCAACGCAAACAGCTCTTTCGCCTgcgc < 1:662134/139‑1 (MQ=255) aCTTCAACAATCTCTCCCAACTTGCCACTTTCAATCGCTTTTTTCGCTGTCAGGAAGCAGGAGTCAAAGCGACGATTCTGATACGGCGTGACGGTCAGCCCTTTGCTTTTCGCCAACGCAAACAGCTCTTTCTCCTgcgc < 2:1166029/140‑1 (MQ=255) aCTTCAACAATCTCTCCCAACTTGCCACTTTCAATCGCTTTTTTCGCTGTCAGGAAGCAGGAGTCAAAGCGACGATTCTGATACGGCGTGACGGTCAGCCCTTTGCTTTTCGCCAACGCAAACAGCTCTTTCTCCTgcgc < 2:1042661/140‑1 (MQ=255) aCTTCAACAATCTCTCCCAACTTGCCACTTTCAATCGCTTTTTTCGCTGTCAGGAAGCAGGAGTCAAAGCGACGATTCTGATACGGCGTGACGGTCAGCCCTTTGCTTTTCGCCAACGCAAACAGCTCTTTCGCCTgcgc < 2:196265/140‑1 (MQ=255) aCTTCAACAATCTCTCCCAACTTGCCACTTTCAATCGCTTTTTTCGCTGTCAGGAAGCAGGAGTCAAAGCGACGATTCTGATACGGCGTGACGGTCAGCCCTTTGCTTTTCGCCAACGCAAACAGCTCTTTCGCCTgcgc < 1:1016410/140‑1 (MQ=255) aCTTCAACAATCCCTCCCAACTTGCCACTTTCAATCGCTTTTTTCGCTGTCAGGAAGCAGGAGTCAAAGCGACGATTCTGATACGGCGTGACGGTCAGCCCTTTGCTTTTCGCCAACGCAAACAGCTCTTTCGCCTgcgc < 1:1267098/140‑1 (MQ=255) cTTCAACAATCTCTCCCAACTTGCCACTTTCAATCGCTTTTTTCGCTGTCAGGAAGCAGGAGTCAAAGCGACGATTCTGATACGGCGTGACGGTCAGCCCTTTGCTAATCGCCAACGCAAAACGCTCTTTCGCCTGAGCa > 2:1097199/1‑140 (MQ=255) aacaaTCTCTCCCAACTTGCCACTTTCAATCGCTTTTTTCGCTGTCAGGAAGCAGGAGTCAAAGCGACGATTCTGATACGGCGTGACGGTCAGCCCTTTGCTTTTCGCCAACGCAAACAGCTCTTTCGCCTGCGCAAgtg < 1:655993/140‑1 (MQ=255) caaTCTCTCCCAACTTGCCACTTTCAATCGCTTTTTTCGCTGTCAGGAAGCAGGAGTCAAAGCGACGATTCTGATACGGCGTGACGGTCAGCCCTTTGCTTTTCGCCAACGCGAACAGCTCTTTCGCCTGCGCAAGTGTc < 1:759683/140‑1 (MQ=255) caaTCTCTCCCAACTTGCCACTTTCAATCGCTTTTTTCGCTGTCAGGAAGCAGGAGTCAAAGCGACGATTCTGATACGGCGTGACGGTCAGCCCTTTGCTTTTCGCCAACGCAAACAGCTCTTTCGCCTGCGCAAGTGTc < 1:1095058/140‑1 (MQ=255) tctctcCCAACTTGCCACTTTCAATCGCTTTTTTCGCTGTCAGGAAGCAGGAGTCAAAGCGACGATTCTGATACGGCGTGACGGTCAGCCCTTTGCTTTTCGCCAACGCAAACAGCTCTTTCGCCTGCGCAAGTGTCGGa > 2:1130084/1‑140 (MQ=255) ctcCCAACTTGCCACTTTCAATCGCTTTTTTCGCTGTCAGGAAGCAGGAGTCAAAGCGACGATTCTGATACGGCGTGACGGTCAGCCCTTTGCTTTTCGCCAACGCAAACAGCTCTTTCGCCTGCGCAAGTGTCGGAGTg < 1:612372/140‑1 (MQ=255) tcCCAACTTGCCACTTTCAATCGCTTTTTTCGCTGTCAGGAAGCAGGAGTCAAAGCGACGATTCTGATACGGCGTGACGGTCAGCCCTTTGCTTTTCGCCAACGCAAACAGCTCTTTCGCCTGCGCGAGTGTCGGAGTGa > 2:437176/1‑140 (MQ=255) cccAACTTGCCACTTTCAATCGCTTTTTTCGCTGTCAGGAAGCAGGAGTCAAAGCGACGATTCTGATACGGCGTGACGGTCAGCCCTTTGCTTTTCGCCAACGCAAACAGCTCTTTCTCCTGCGCAAGTGTCGGAGTGaa > 2:860539/1‑140 (MQ=255) cccAACTTGCCACTTTCAATCGCTTTTTTCGCTGTCAGGAAGCAGGAGTCAAAGCGACGATTCTGATACGGCGTGACGGTCAGCCCTTTGCTTTTCGCCAACGCAAACAGCTCTTTCGCCTGCGCAAGTGTCGGAGTGaa > 1:615833/1‑140 (MQ=255) ccAACTTGCCACTTTCAATCGCTTTTTTCGCTGTCAGGAAGCAGGAGTCAAAGCGACGATTCTGATACGGCGTGACGGTCAGCCCTTTGCTTTTCGCCAACGCAAACAGCTCTTTCGCCTGCGCAAGTGTCGGAGTGAAc < 1:806013/140‑1 (MQ=255) cAACTTGCCACTTTCAATCGCTTTTTTCGCTGTCAGGAAGCAGGAGTCAAAGCGACGATTCTGATACGGCGTGACGGTCAGCCCTTTGCTTTTCGCCAACGCAAACAGCTCTTTCGCCTGCGCAAGTGTCGGAGTGAACg < 2:146233/140‑1 (MQ=255) ttGCCACTTTCAATCGCTTTTTTCGCTGTCAGGAAGCAGGAGTCAAAGCGACGATTCTGATACGGCGTGACGGTCAGCCCTTTGCTTTTCGCCAACGCAAACAGCTCTTTCTCCTGCGCAAGTGTCGGAGTGAACGGttt > 1:598694/1‑140 (MQ=255) ccACTTTCAATCGCTTTTTTCGCTGTCAGGAAGCAGGAGTCAAAGCGACGATTCTGATACGGCGTGACGGTCAGCCCTTTGCTTTTCGCCAACGCAAACAGCTCTTTCGCCTGCGCAAGTGTCGGAGTGAACGGTTTTTc > 2:78912/1‑140 (MQ=255) ccACTTTCAATCGCTTTTTTCGCTGTCAGGAAGCAGGAGTCAAAGCGACGATTCTGATACGGCGTGACGGTCAGCCCTTTGCTTTTCGCCAACGCAAACAGCTCTTTCGCCTGCGCAAGTGTCGGAGTGAACGGTTTTTc > 1:429795/1‑140 (MQ=255) ccACTTTCAATCGCTTTTTTCGCTGTCAGGAAGCAGGAGTCAAAGCGACGATTCTGATACGGCGTGACGGTCAGCCCTTTGCTTTTCGCCAACGCAAACAGCTCTTTCGCCTGCGCAAGTGTCGGAGTGAACGGTTTTTc > 2:1140644/1‑140 (MQ=255) ccACTTTCAATCGCTTTTTTCGCTGTCAGGAAGCAGGAGTCAAAGCGACGATTCTGATACGGCGTGACGGTCAGCCCTTTGCTTTTCGCCAACGCAAACAGCTCTTTCGCCTGCGCAAGTGTCGGAGTGAACGGTTTTTc > 1:1201792/1‑140 (MQ=255) aCTTTCAATCGCTTTTTTCGCTGTCAGGAAGCAGGAGTCAAAGCGACGATTCTGATACGGCGTGACGGTCAGCCCTTTGCTTTTCGCCAACGCAAACAGCTCTTTCGCCTGCGCAAGTGTCGGAGTGAACGGTTTTTCGa < 2:573625/140‑1 (MQ=255) cTTTCAATCGCTTTTTTCGCTGTCAGGAAGCAGGAGTCAAAGCGACGATTCTGATACGGCGTGACGGTCAGCCCTTTGCTTTTCGCCAACGCAAACAGCTCTTTCTCCTGCGCAAGTGTCGGAGTGAACGGTTTTTCGAc < 2:178184/140‑1 (MQ=255) tCAATCGCTTTTTTCGCTGTCAGGAAGCAGGAGTCAAAGCGACGATTCTGATACGGCGTGACGGTCAGCCCTTTGCTTTTCGCCAACGCAAACAGCTCTTTCGCCTGCGCAAGTGTCGGAGTGAACGGTTTTTCGACCAg > 2:437706/1‑140 (MQ=255) aTCGCTTTTTTCGCTGTCAGGAAGCAGGAGTCAAAGCGACGATTCTGATACGGCGTGACGGTCAGCCCTTTGCTTTTCGCCAACGCAAACAGCTCTTTCTCCTGCGCAAGTGTCGGAGTGAACGGTTTTTCGACCAGcac > 2:1095910/1‑140 (MQ=255) tCGCTTTTTTCGCTGTCAGGAAGCAGGAGTCAAAGCGACGATTCTGATACGGCGTGACGGTCAGCCCTTTGCTTTTCGCCAACGCAAACAGCTCTTTCTCCTGCGCAAGTGTCGGAGTGAACGGTTTTTCGACCAGcaca > 2:824703/1‑140 (MQ=255) cTTTTTTCGCTGTCAGGAAGCAGGAGTCAAAGCGACGATTCTGATACGGCGTGACGGTCAGCCCTTTGCTTTTCGCCAACGCAAACAGCTCTTTCGCCTGCGCAAGTGTCGGAGTGAACGGTTTTTCGACCAGCACAttt < 2:633504/140‑1 (MQ=255) cTTTTTTCGCTGTCAGGAAGCAGGAGTCAAAGCGACGATTCTGATACGGCGTGACGGTCAGCCCTTTGCTTTTCGCCAACGCAAACAGCTCTTTCGCCTGCGCAAGTGTCGGAGTGAACGGTTTTTCGACCAGCACAttt > 1:1078370/1‑140 (MQ=255) ttttttCGCTGTCAGGAAGCAGGAGTCAAAGCGACGATTCTGATACGGCGTGACGGTCAGCCCTTTGCTTTTCGCCAACGCAAACAGCTCTTTCGCCTGCGCAAGTGTCGGAGTGAACGGTTTTTCGACCAGCACAtttt > 2:12602/1‑140 (MQ=255) ttttCGCTGTCAGGAAGCAGGAGTCAAAGCGACGATTCTGATACGGCGTGACGGTCAGCCCTTTGCTTTTCGCCAACGCAAACAGCTCTTTCGCCTGCGCGAGTGTCGGAGTGAACGGTTTTTCGACCAGCACAATTTTc < 1:437176/140‑1 (MQ=255) ttttCGCTGTCAGGAAGCAGGAGTCAAAGCGACGATTCTGATACGGCGTGACGGTCAGCCCTTTGCTTTTCGCCAACGCAAACAGCTCTTTCGCCTGCGCAAGTGTCGGAGTGAACGGTTTTTCGACCAGCACATTTTTc < 2:615833/140‑1 (MQ=255) tCAGGAAGCAGGAGTCAAAGCGACGATTCTGATACGGCGTGACGGTCAGCCCTTTGCTTTTCGCCAACGCAAACAGCTCTTTCGCCTGCGCAAGTGTCGGAGTGAACGGTTTTTCGACCAGCACATTTTTCCCGGCTTcc < 2:182134/140‑1 (MQ=255) aGGAAGCAGGAGTCAAAGCGACGATTCTGATACGGCGTGACGGTCAGCCCTTTGCTTTTCGCCAACGCAAACAGCTCTTTCGCCTGCGCAAGTGTCGGAGTGAACGGTTTTTCGACCAGCACATTTTTCCCGGCTTCCAg > 1:292952/1‑140 (MQ=255) aGCAGGAGTCAAAGCGACGATTCTGATACGGCGTGACGGTCAGCCCTTTGCTTTTCGCCAACGCAAACAGCTCTTTCTCCTGCGCAAGTGTCGGAGTGAACGGTTTTTCGACCAGCACATTTTTCCCGGCTTCCAgcgcg < 2:1096587/140‑1 (MQ=255) ggAGTCAAAGCGACGATTCTGATACGGCGTGACGGTCAGGCCTTTGCTTTTCGCCAACGCAAACAGCTCTTTCGCCTGCGCAAGTGTCGGAGTGAACGGTTTTTCGACCAGCACATTTTTCCCGGCTTCCAGCGCGCGtt > 2:1141986/1‑140 (MQ=255) ggAGTCAAAGCGACGATTCTGATACGGCGTGACGGTCAGCCCTTTGCTTTTCGCCAACGCAAACAGCTCTTTCTCCTGCGCAAGTGTCGGAGTGAACGGTTTTTCGACCAGCACATTTTTCCCGGCTTCCAGCGCGCGtt > 2:765675/1‑140 (MQ=255) aGTCAAAGCGACGATTCTGATACGGCGTGACGGTCAGCCCTTTGCTTTTCGCCAACGCAAACAGCTCTTTCTCCTGCGCAAGTGTCGTAGTGAACGGTTTTTCGACCAGCACATTTTTCCCGGCTTCCAGCGCGCGTTTc > 1:629534/1‑140 (MQ=255) aGTCAAAGCGACGATTCTGATACGGCGTGACGGTCAGCCCTTTGCTTTTCGCCAACGCAAACAGCTCTTTCTCCTGCGCAAGTGTCGGAGTGAACGGTTTTTCGACCAGCACATTTTTCCCGGCTTcc < 1:1166892/128‑1 (MQ=255) aGTCAAAGCGACGATTCTGATACGGCGTGACGGTCAGCCCTTTGCTTTTAGCCAACGCAAACAGCTCTTTCTCCTGCGCAAGTGTCGGAGTGAACGGTTTTTCGACCAGCACATTTTTCCCGGCTTcc > 2:1166892/1‑128 (MQ=255) cAAAGCGACGATTCTGATACGGCGTGACGGTCAGCCCTTTGCTTTTCGCCAACGCAAACAGCTCTTTCTCCTGCGCAAGTGTCGGAGTGAACGGTTTTTCGACCAGCACATTTTTCCCGGCTTCCAGCGCGCGTTTcgcg < 1:765675/140‑1 (MQ=255) aaGCGACGATTCTGATACGGCGTGACGGTCAGCCCTTTGCTTTTCGCCAACGCAAACAGCTCTTTCTCCTGCGCAAGTGTCGGAGTGAACGGTTTTTCGACCAGCACATTTTTCCCGGCTTCCAGCGCGCGTTTCGCGTa < 1:409601/140‑1 (MQ=255) aaGCGACGATTCTGATACGGCGTGACGGTCAGCCCTTTGCTTTTCGCCAACGCAAACAGCTCTTTCGCCTGCGCAAGTGTCGGAGTGAACGGTTTTTCGACCAGCACATTTTTCCCGGCTTCCAGCGCGCGTTTCGCGTa < 1:957826/140‑1 (MQ=255) aGCGACGATTCTGATACGGCGTGACGGTCAGCCCTTTGCTTTTCGCCAACGCAAACAGCTCTTTCTCCTGCGCAAGTGTCGGAGTGAACGGTTTTTCGACCAGCACATTTTTCCCGGCTTCCAGCGCGCGTTTCGCGTAc > 2:85752/1‑140 (MQ=255) aGCGACGATTCTGATACGGCGTGACGGTCAGCCCTTTGCTTTTCGCCAACGCAAACAGCTCTTTCGCCTGCGCAAGTGTCGGAGTGAACGGTTTTTCGACCAGCACATTTTTCCCGGCTTCCAGCGCGCGTTTCGCGTAc > 2:614557/1‑140 (MQ=255) aGCGACGATTCTGATACGGCGTGACGGTCAGCCCTTTGCTTTTCGCCAACGCAAACAGCTCTTTCGCCTGCGCAAGTGTCGGAGTGAACGGTTTTTCGACCAGCACATTTTTCCCGGCTTCCAGCGCGCGTTTCGCGTAc > 1:6863/1‑140 (MQ=255) gCGACGATTCTGATACGGCGTGACGGTCAGCCCTTTGCTTTTCGCCAACGCAAACAGCTCTTTCTCCTGCGCAAGTGTCGGAGTGAACGGTTTTTCGACCAGCACATTTTTCCCGGCTTCCAGCGCGCGTTTCGCGTACt < 2:878424/140‑1 (MQ=255) gCGACGATTCTGATACGGCGTGACGGTCAGCCCTTTGCTTTTCGCCAACGCAAACAGCTCTTTCGCCTGCGCAAGTGTCGGAGTGAACGGTTTTTCGACCAGCACATTTTTCCCGGCTTCCAGCGCGCGTTTCGCGTACt < 2:1167919/140‑1 (MQ=255) ttCTGATACGGCGTGACGGTCAGCCCTTTGCTTTTCGCCAACGCAAACAGCTCTTTCGCCTGCGCAAGTGTCGGAGTGAACGGTTTTTCGACCAGCACATTTTTCCCGGCTTCCAGCGCGCGTTTCGCGTACTCGAAATg > 2:576659/1‑140 (MQ=255) tGATACGGCGTGACGGTCAGCCCTTTGCTTTTCGCCAACGCAAACAGCTCTTTCGCCTGCGCAAGTGTCGGAGTGAACGGTTTTTCGACCAGCACATTTTTCCCGGCTTCCAGCGCGCGTTTCGCGTACTCGAAATGGCt < 1:1009718/140‑1 (MQ=255) gATACGGCGTGACGGTCAGCCCTTTGCTTTTCGCCAACGCAAACAGCTCTTTCGCCTGCGCAAGTGTCGGAGTGAACGGTTTTTCGACCAGCACATTTTTCCCGGCTTCCAGCGCGCGTTTCGCGTACTCGAAATGGCTg > 1:603992/1‑140 (MQ=255) aTACGGCGTGACGGTCAGCCCTTTGCTTTTCGCCAACGCAAACAGCTCTTTCGCCTGCGCAAGTGTCGGAGTGAACGGTTTTTCGACCAGCACATTTTTCCCGGCTTCCAGCGCGCGTTTCGCGTACTCGAAATGGCTGt > 1:246836/1‑140 (MQ=255) aTACGGCGTGACGGTCAGCCCTTTGCTTTTCGCCAACGCAAACAGCTCTTTCGCCTGCGCAAGTGTCGGAGTGAACGGTTTTTCGACCAGCACATTTTTCCCGGCTTCCAGCGCGCGTTTCGCGTACTCGAAATGGCTGt < 2:907676/140‑1 (MQ=255) gCGTGACGGTCAGCCCTTTGCTTTTCGCCAACGCAAACAGCTCTTTCTCCTGCGCAAGTGTCGGAGTGAACGGTTTTTCGACCAGCACATTTTTCCCGGCTTCCAGCGCGCGTTTCGCGTACTCGAAATGGCTGTCcgcg > 1:719726/1‑140 (MQ=255) gCGTGACGGTCAGCCCTTTGCTTTTCGCCAACGCAAACAGCTCTTTCTCCTGCGCAAGTGTCGGAGTGAACGGTTTTTCGACCAGCACATTTTTCCCGGCTTCCAGCGCGCGTTTCGCGTACTCGAAATGGCTGTCcgcg > 1:1003820/1‑140 (MQ=255) gCGTGACGGTCAGCCCTTTGCTTTTCGCCAACGCAAACAGCTCTTTCGCCTGCGCAAGTGTCGGAGTGAACGGTTTTTCGACCAGCACATTTTTCCCGGCTTCCAGCGCGCGTTTCGCGTACTCGAAATGGCTGACcgcg > 2:986229/1‑140 (MQ=255) cGTTACGGTCAGCCCTTTGCTTTTCGCCAACGCAGAAAGATCTTTCTCCTGCGCAAGTGTCGGAGTGCACGGGTTTTCGACCAGCCCATTTTTCCTGGCTTCCACCGCGCGTTTCGCGTACTCGAAAGGGCTGTCCgtgt > 2:713902/1‑140 (MQ=255) cGTGACGGTCAGCCCTTTGCTTTTCGCCAACGCAAACAGCTCTTTCGCCTGCGCAAGTGTCGGAGTGAACGGTTTTTCGACCAGCACATTTTTCCCGGCTTCCAGCGCGCGTTTCGCGTACTCGAAATGGCTGTCcgcgg > 1:110847/1‑139 (MQ=255) cGTGACGGTCAGCCCTTTGCTTTTCGCCAACGCAAACAGCTCTTTCGCCTGCGCAAGTGTCGGAGTGAACGGTTTTTCGACCAGCACATTTTTCCCGGCTTCCAGCGCGCGTTTCGCGTACTCGAAATGGCTGTCCGCGt > 2:997184/1‑140 (MQ=255) cGTGACGGTCAGCCCTTTGCTTTTCGCCAACGCAAACAGCTCTTTCGCCTGCGCAAGTGTCGGAGTGAACGGTTTTTCGACCAGCACATTTTTCCCGGCTTCCAGCGCGCGTTTCGCGTACTCGAAATGGCTGTCCGCGt > 2:1012485/1‑140 (MQ=255) cGTGACGGTCAGCCCTTTGCTTTTCGCCAACGCAAACAGCTCTTTCGCCTGCGCAAGTGTCGGAGTGAACGGTTTTTCGACCAGCACATTTTTCCCGGCTTCCAGCGCGCGTTTCGCGTACTCGAAATGGCTGTCCGCGt > 1:849304/1‑140 (MQ=255) gTGACGGTCAGCCC‑TTGCTTTTCGCCAACGCAAACAGCTCTTTCTCCTGCGCAAGTGTCGGAGTGAACGGTTTTTCGACCAGCACATTTTTCCCGGCTTCCAGCGCGCGTTTCGCGTACTCGAAATGGCTGTCCGCGTgg < 1:265721/140‑1 (MQ=255) tGACGGTCAGCCCTTTGCTTTTCGCCAACGCAAACAGCTCTTTCGCCTGCGCAAGTGTCGGAGTGAACGGTTTTTCGACCAGCACATTTTTCCCGGCTTCCAGCGCGCGTTTCGCGTACTCGAAATGGCTGTCCGCGTgg < 1:747361/140‑1 (MQ=255) aCGGTCAGCCCTTTGCTTTTCGCCAACGCAAACAGCTCTTTCGCCTGCGCAAGTGTCGGAGTGAACGGTTTTTCGACCAGCACATTTTTCCCGGCTTCCAGCGCGCGTTTCGCGTACTCGAAATGGCTGTCcgcg < 1:317299/135‑1 (MQ=255) aCGGTCAGCCCTTTGCTTTTCGCCAACGCAAACAGCTCTTTCGCCTGCGCAAGTGTCGGAGTGAACGGTTTTTCGACCAGCACATTTTTCCCGGCTTCCAGCGCGCGTTTCGCGTACTCGAAATGGCTGTCcgcg > 2:317299/1‑135 (MQ=255) aCGGTCAGCCCTTTGCTTTTCGCCAACGCAAACAGCTCTTTCGCCTGCGCAAGTGTCGGAGTGAACGGTTTTTCGACCAGCACATTTTTCCCGGCTTCCAGCGCGCGTTTCGCGTACTCGAAATGGCTGTCCGCGTgggg > 1:444409/1‑139 (MQ=255) aCGGTCAGCCCTTTGCTTTTCGCCAACGCAAACAGCTCTTTCGCCTGCGCAAGTGTCGGAGTGAACGGTTTTTCGACCAGCACATTTTTCCCGGCTTCCAGCGCGCGTTTCGCGTACTCGAAATGGCTGTCCGCGTGGGt > 1:320740/1‑140 (MQ=255) cGGTCAGCCCTTTGCTTTTCGCCAACGCAAACAGCTCTTTCTCCTGCGCAAGTGTCGGAGTGAACGGTTTTTCGACCAGCACATTTTTCCCGGCTTCCAGCGCGCGTTTCGCGTACTCGAAATGGCTGTCCGCGTGGGTg < 2:719726/140‑1 (MQ=255) ggTCAGCCCTTTGCTTTTCGCCAACGCAAACAGCTCTTTCGCCTGCGCAAGTGTCGGAGTGAACGGTTTTTCGACCAGCACATTTTTCCCGGCTTCCAGCGCGCGTTTCGCGTACTCGAAATGGCTGTCCGCGTGGGTGc < 1:742285/140‑1 (MQ=255) aGCCCTTTGCTTTTCGCCAACGCAAACAGCTCTTTCGCCTGCGCAAGTGTCGGAGTGAACGGTTTTTCGACCAGCACATTTTTCCCGGCTTCCAGCGCGCGTTTCGCGTACTCGAAATGGCTGTCCGCGTGGGTGCAGac > 1:1069664/1‑140 (MQ=255) cccTTTGCTTTTCGCCAACGCAAACAGCTCTTTCGCCTGCGCAAGTGTCGGAGTGAACGGTTTTTCGACCAGCACATTTTTCCCGGCTTCCAGCGCGCGTTTCGCGTACTCGAAATGGCTGTCCGCGTGGGTGCAGacaa < 2:663310/140‑1 (MQ=255) cTTTGCTTTTCGCCAACGCAAACAGCTCTTTCTCCTGCGCAAGTGTCGGAGTGAACGGTTTTTCGACCAGCACATTTTTCCCGGCTTCCAGCGCGCGTTTCGCGTACTCGAAATGGCTGTCCGCGTGGGTGCAGacaaca < 2:1181951/140‑1 (MQ=255) cTTTGCTTTTCGCCAACGCAAACAGCTCTTTCGCCTGCGCAAGTGTCGGAGTGAACGGTTTTTCGACCAGCACATTTTTCCCGGCTTCCAGCGCGCGTTTCGCGTACTCGAAATGGCTGTCCGCGTGGGTGCAGacaaca < 1:614557/140‑1 (MQ=255) ttGCTTTTCGCCAACGCAAACAGCTCTTTCGCCTGCGCAAGTGTCGGAGTGAACGGTTTTTCGACCAGCACATTTTTCCCGGTTTCCAGCGCGCGTTTCGCGTACTCGAAATGGCTGTCCGCGTGGGTGCAGACaacaac < 1:1097199/140‑1 (MQ=255) ttGCTTTTCGCCAACGCAAACAGCTCTTTCGCCTGCGCAAGTGTCGGAGTGAACGGTTTTTCGACCAGCACATTTTTCCCGGCTTCCAGCGCGCGTTTCGCGTACTCGAAATGGCTGTCCGCGTGGGTGCAGACaacaac > 2:237906/1‑140 (MQ=255) tGCTTTTCGCCAACGCAAACAGCTCTTTCGCCTGCGCAAGTGTCGGAGTGAACGGTTTTTCGACCAGCACATTTTTCCCGGCTTCCAGCGCGCGTTTCGCGTACTCGAAATGGCTGTCCGCGTGGGTGCAGACAACAAcc > 2:1164831/1‑140 (MQ=255) ttCGCCAACGCAAACAGCTCTTTCGCCTGCGCAAGTGTCGGAGTGAACGGTTTTTCGACCAGCACATTTTTCCCGGCTTCCAGCGCGCGTTTCGCGTACTCGAAATGGCTGTCCGCGTGGGTGCAGACAACAACCAGCtt < 2:320740/140‑1 (MQ=255) ttCGCCAACGCAAACAGCTCTTTCGCCTGCGCAAGTGTCGGAGTGAACGGTTTTTCGACCAGCACATTTTTCCCGGCTTCCAGCGCGCGTTTCGCGTACTCGAAATGGCTGTCCGCGTGGGTGCAGACAACAACCAGCtt > 2:1047880/1‑140 (MQ=255) ttCGCCAACGCAAACAGCTCTTTCGCCTGCGCAAGTGTCGGAGTGAACGGTTTTTCGACCAGCACATTTTTCCCGGCTTCCAGCGCGCGTTTCGCGTACTCGAAATGGCTGTCCGCGTGGGTGCAGACAACAACCAGCtt > 1:419108/1‑140 (MQ=255) tCGCCAACGCAAACAGCTCTTTCGCCTGCGCAAGTGTCGGAGTGAACGGTTTTTCGACCAGCACATTTTTCCCGGCTTCCAGCGCGCGTTTCGCGTACTCGAAATGGCTGTCCGCGTGGGTGCAGACAACAACCAGCTTa > 1:729590/1‑140 (MQ=255) cAACGCAAACAGCTCTTTCGCCTGCGCAAGTGTCGGAGTGAACGGTTTTTCGACCAGCACATTTTTCCCGGCTTCCAGCGCGCGTTTCGCGTACTCGAAATGGCTGTCCGCGTGGGTGCAGACAACAACCAGCTTAACAt < 2:618111/140‑1 (MQ=255) cAACGCAAACAGCTCTTTCGCCTGCGCAAGTGTCGGAGTGAACGGTTTTTCGACCAGCACATTTTTCCCGGCTTCCAGCGCGCGTTTCGCGTACTCGAAATGGCTGTCCGCGTGGGTGCAGACAACAACCAGCTTAACAt < 1:1130084/140‑1 (MQ=255) cAACGCAAACAGCTCTTTCGCCTGCGCAAGTGTCGGAGTGAACGGTTTTTCGACCAGCACATTTTTCCCGGCTTCCAGCGCGCGTTTCGCGTACTCGAAATGGCTGTCCGCGTGGGTGCAGACAACAACCAGCTTAACAt < 2:1129525/140‑1 (MQ=255) cAAACAGCTCTTTCTCCTGCGCAAGTGTCGTAGTGAACGGTTTTTCGACCAGCACATTTTTCCCGGCTTCCAGCGCGCGTTTCGCGTACTCGAAATGGCTGTCCGCGTGGGTGCAGACAACAACCAGCTTAACATCGGGa < 2:629534/140‑1 (MQ=255) cAAACAGCTCTTTCGCCTGCGCAAGTGTCGGAGTGAACGGTTTTTCGACCAGCACATTTTTCCCGGCTTCCAGCGCGCGTTTCGCGTACTCGAAATGGCTGTCCGCGTGGGTGCAGACaacaac > 2:27843/1‑124 (MQ=255) cAAACAGCTCTTTCGCCTGCGCAAGTGTCGGAGTGAACGGTTTTTCGACCAGCACATTTTTCCCGGCTTCCAGCGCGCGTTTCGCGTACTCGAAATGGCTGTCCGCGTGGGTGCAGACaacaac < 1:27843/124‑1 (MQ=255) cAAACAGCTCTTTCGCCTGCGCAAGTGTCGGAGTGAACGGTTTTTCGACCAGCACATTTTTCCCGGCTTCCAGCGCGCGTTTCGCGTACTCGAAATGGCTGTCCGCGTGGGTGCAGACAACAACCAGCTTAACATCGGGa < 2:1201792/140‑1 (MQ=255) cAAACAGCTCTTTCGCCTGCGCAAGTGTCGGAGTGAACGGTTTTTCGACCAGCACATTTTTCCCGGCTTCCAGCGCGCGTTTCGCGTACTCGAAATGGCTGTCCGCGTGGGTGCAGACAACAACCAGCTTAACATCGGGa < 1:1012485/140‑1 (MQ=255) cAAACAGCTCTTTCGCCTGCGCAAGTGTCGGAGTGAACGGTTTTTCGACCAGCACATTTTTCCCGGCTTCCAGCGCGCGTTTCGCGTACTCGAAATGGCTGTCCGCGTGGGTGCAGACAACAACCAGCTTAACATCGGGa < 1:1141986/140‑1 (MQ=255) cAAACAGCTCTTTCGCCTGCGCAAGTGTCGGAGTGAACGGTTTTTCGACCAGCACATTTTTCCCGGCTTCCAGCGCGCGTTTCGCGTACTCGAAATGGCTGTCCGCGTGGGTGCAGACAACAACCAGCTTAACATCGGGa < 1:211336/140‑1 (MQ=255) cAAACAGCTCTTTCGCCTGCGCAAGTGTCGGAGTGAACGGTTTTTCGACCAGCACATTTTTCCCGGCTTCCAGCGCGCGTTTCGCGTACTCGAAATGGCTGTCCGCGTGGGTGCAGACAACAACCAGCTTAACATCGGGa < 2:743316/140‑1 (MQ=255) cAAACAGCTCTTTCGCCTGCGCAAGTGTCGGAGTGAACGGTTTTTCGACCAGCACATTTTTCCCGGCTTCCAGCGCGCGTTTCGCGTACTCGAAATGGCTGTCCGCGTGGGTGCAGACAACAACCAGCTTAACATCGGGa < 2:603992/140‑1 (MQ=255) aaCAGCTCTTTCGCCTGCGCAAGTGTCGGAGTGAACGGTTTTTCGACCAGCACATTTTTCCCGGCTTCCAGCGCGCGTTTCGCGTACTCGAAATGGCTGTCCGCGTGGGTGCAGACAACAACCAGCTTAACATCGGGATc > 1:228377/1‑140 (MQ=255) tttCTCCTGCGCAAGTGTCGGAGTGAACGGTTTTTCGACCAGCACATTTTTCCCGGCTTCCAGCGCGCGTTTCGCGTACTCGAAATGGCTGTCCGCGTGGGTGCAGACAACAACCAGCTTAACATCGGGATCGTTTAGTa > 2:962985/1‑140 (MQ=255) ttCTCCTGCGCAAGTGTCGGAGTGAACGGTTTTTCGACCAGCACATTTTTCCCGGCTTCCAGCGCGCGTTTCGCGTACTCGAAGTGGCTGTCCGCGTGGGTGCAGACAACAACCAGCTTAACATCGGGATCGTTTAGTAc < 2:1003820/140‑1 (MQ=255) ttCGCCTGCGCAAGTGTCGGAGTGAACGGTTTTTCGACCAGCACATTTTTCCCGGCTTCCAGCGCGCGTTTCGCGTACTCGAAATGGCTGTCCGCGTGGGTGCAGACAACAACCAGCTTAACATCGGGATCGTTTAGTAc < 1:898963/140‑1 (MQ=255) | CTTTCCACTTCAACAATCTCTCCCAACTTGCCACTTTCAATCGCTTTTTTCGCTGTCAGGAAGCAGGAGTCAAAGCGACGATTCTGATACGGCGTGACGGTCAGCCCTTTGCTTTTCGCCAACGCAAACAGCTCTTTCGCCTGCGCAAGTGTCGGAGTGAACGGTTTTTCGACCAGCACATTTTTCCCGGCTTCCAGCGCGCGTTTCGCGTACTCGAAATGGCTGTCCGCGTGGGTGCAGACAACAACCAGCTTAACATCGGGATCGTTTAGTAC > NC_000913/3580354‑3580628 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |