Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,949,193	(A)6→5	intergenic (‑183/‑49)	amiC ← / → argA	N‑acetylmuramoyl‑L‑alanine amidase C/N‑acetylglutamate synthase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,949,188	0	A	.	100.0%	313.2 / NA	74	intergenic (‑178/‑54)	amiC/argA	N‑acetylmuramoyl‑L‑alanine amidase C/N‑acetylglutamate synthase
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base . (34/40);  total (34/40)

GTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCATAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCGAAAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGTGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGT  >  NC_000913/2949049‑2949323                                                                                                                                            |                                                                                                                                        gTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCATAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCGa                                                                                                                                         >  2:749352/1‑140 (MQ=255)   aaaCGACTAATTTGACCGGAAACTTTAGCGAAAGACGCATAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCGaaa                                                                                                                                       >  2:1409738/1‑140 (MQ=255)   aaaCGACTAATTTGACCGGAAACTTTAGCGAAAGACGCATAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCGaaa                                                                                                                                       >  2:1363518/1‑140 (MQ=255)   aaaCGACTAATTTGACCGGAAACTTTAGCGAAAGACGCATAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCGaaa                                                                                                                                       >  2:1392016/1‑140 (MQ=255)     aCGACTAATTTGACCGGAAACTTTAGCGAAAGACGCATAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCGaaaaa                                                                                                                                     >  2:922155/1‑140 (MQ=255)     aCGACTAATTTGACCGGAAACTTTAGCGAAAGACGCATAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCGaaaaa                                                                                                                                     <  2:1279707/140‑1 (MQ=255)     aCGACTAATTTGACCGGAAACTTTAGCGAAAGACGCATAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCGaaaaa                                                                                                                                     <  1:1283361/140‑1 (MQ=255)     aCGACTAATTTGACCGGAAACTTTAGCGAAAGACGCATAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCGaaaaa                                                                                                                                     <  1:99767/140‑1 (MQ=255)     aCGACTAATTTGACCGGAAACTTTAGCGAAAGACGCATAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCGaaaaa                                                                                                                                     <  1:866874/140‑1 (MQ=255)     aCGACTAATTTGACCGGAAACTTTAGCGAAAGACGCATAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCGaaaaa                                                                                                                                     <  1:1392016/140‑1 (MQ=255)          tAATTTGACCGGAAACTTTAGCGAAAGACGCATAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCG‑AAAAACAGaa                                                                                                                               <  2:236087/140‑1 (MQ=255)           aaTTTGACCGGAAACTTTAGCGAAAGACGCATAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCG‑AAAAACAGAAt                                                                                                                              <  1:506874/140‑1 (MQ=255)           aaTTTGACCGGAAACTTTAGCGAAAGACGCATAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCG‑AAAAACAGAAt                                                                                                                              <  1:1417364/140‑1 (MQ=255)            aTTTGACCGGAAACTTTAGCGAAAGACGCATAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCG‑AAAAACAGAATa                                                                                                                             >  2:1172712/1‑140 (MQ=255)            aTTTGACCGGAAACTTTAGCGAAAGACGCATAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCG‑AAAAACAGAATa                                                                                                                             >  1:826409/1‑140 (MQ=255)                gcccGGAAACTTTAGCGAAAGACGCATAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCG‑AAAAACAGAATaaaaa                                                                                                                         <  1:663157/138‑1 (MQ=255)                 aCCGGAAGCTTTAGCGAAAGACGCATAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCG‑AAAAACAGAATAAAAAt                                                                                                                        >  1:1139644/1‑140 (MQ=255)                      aaaCTTTAGCGAAAGACGCATAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCG‑AAAAACAGAATAAAAATACACt                                                                                                                   >  2:1452003/1‑140 (MQ=255)                           ttAGCGAAAGACGCATAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCG‑AAAAACAGAATAAAAATACACTAAttt                                                                                                              >  1:146077/1‑140 (MQ=255)                               cGAAAGACGCATAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCG‑AAAAACAGAATAAAAATACACTAATTTCGaa                                                                                                          <  2:1139397/140‑1 (MQ=255)                               cGAAAGACGCATAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCG‑AAAAACAGAATAAAAATACACTAATTTCGaa                                                                                                          <  1:1452003/140‑1 (MQ=255)                               cGAAAGACGCATAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCG‑AAAAACAGAATAAAAATACACTAATTTCGaa                                                                                                          <  2:738895/140‑1 (MQ=255)                                  aaGACGCATACTCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCG‑AAAAACAGAATAAAAATACACTAATTTCGaataa                                                                                                       <  2:1359376/140‑1 (MQ=255)                                  aaGACGCATAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCG‑AAAAACAGAATAAAAATACACTAATTTCGaataa                                                                                                       <  1:1283034/140‑1 (MQ=255)                                    gACGCATAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCG‑AAAAACAGAATAAAAATACACTAATTTCGAATAATc                                                                                                     <  1:813588/140‑1 (MQ=255)                                    gACGCATAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCG‑AAAAACAGAATAAAAATACACTAATTTCGAATAATc                                                                                                     <  2:1369203/140‑1 (MQ=255)                                    gACGCATAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCG‑AAAAACAGAATAAAAATACACTAATTTCGAATAATc                                                                                                     >  1:1163317/1‑140 (MQ=255)                                      cGCATAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCG‑AAAAACAGAATAAAAATACACTAATTTCGAATAATCAt                                                                                                   >  1:1041289/1‑140 (MQ=255)                                      cGCATAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCG‑AAAAACAGAATAAAAATACACTAATTTCGAATAATCAt                                                                                                   >  1:1324477/1‑140 (MQ=255)                                           aaTCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCG‑AAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCaaa                                                                                              <  1:45825/140‑1 (MQ=255)                                             tCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCG‑AAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAaga                                                                                            >  1:1137071/1‑140 (MQ=255)                                              cTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCG‑AAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAagag                                                                                           <  2:720757/140‑1 (MQ=255)                                                    tCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCG‑AAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGTGTGc                                                                                     <  1:590954/140‑1 (MQ=255)                                                    tCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCG‑AAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGTGTGc                                                                                     <  1:343588/140‑1 (MQ=255)                                                      taataaACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCG‑AAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGTGTGCCg                                                                                   <  1:922155/140‑1 (MQ=255)                                                       aataaACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCG‑AAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGTGTGCCGt                                                                                  >  1:1277196/1‑140 (MQ=255)                                                        ataaACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCG‑AAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGTGTGc                                                                                     <  1:476023/136‑1 (MQ=255)                                                        ataaACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCG‑AAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGTGTGc                                                                                     >  2:476023/1‑136 (MQ=255)                                                         taaACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCG‑AAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGTGTGCCGTgg                                                                                <  2:1411860/140‑1 (MQ=255)                                                         taaACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCG‑AAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGTGTGCCGTgg                                                                                >  2:656844/1‑140 (MQ=255)                                                           aaCGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCG‑AAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGTGTGCCGTGGTa                                                                              >  2:1206803/1‑140 (MQ=255)                                                               gTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCG‑AAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGTGTGCCGTGGTAAAgg                                                                          >  2:430332/1‑140 (MQ=255)                                                                tAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCG‑AAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGTGTGCCGTGGTAAAGGa                                                                         >  2:1289403/1‑140 (MQ=255)                                                                tAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCG‑AAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGTGTGCCGTGGTAAAGGa                                                                         >  2:932605/1‑140 (MQ=255)                                                                  aaCATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCG‑AAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGTGTGCCGTGGTAAAGGAAc                                                                       >  2:828203/1‑140 (MQ=255)                                                                   aCATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCG‑AAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGTGTGCCGTGGTAAAGGAACg                                                                      <  2:518781/140‑1 (MQ=255)                                                                       tCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCG‑AAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGTGTGCCGTGGTAAAGGAACGTaaa                                                                  >  1:535147/1‑140 (MQ=255)                                                                             tataTTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCG‑AAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGTGTGCCGTGGTAAAGGAACGTAAAACCGAg                                                            <  1:1363518/140‑1 (MQ=255)                                                                              atatTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCG‑AAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGTGTGCCGTGGTAAAGGAACGTAAAACCGAGt                                                           >  2:694656/1‑140 (MQ=255)                                                                                 ttCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCG‑AAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGTGTGCCGTGGTAAAGGAACGTAAAACCGAGTTgg                                                        >  1:492481/1‑140 (MQ=255)                                                                                  tCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCG‑AAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGTGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGt                                                       <  1:1372291/140‑1 (MQ=255)                                                                                   cACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCG‑AAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGTGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGTc                                                      >  1:1445862/1‑140 (MQ=255)                                                                                   cACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCG‑AAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGTGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGTc                                                      >  2:1442506/1‑140 (MQ=255)                                                                                    aCGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCG‑AAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGTGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCg                                                     <  2:146077/140‑1 (MQ=255)                                                                                     cGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCG‑AAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGTGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGa                                                    <  2:306795/140‑1 (MQ=255)                                                                                     cGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCG‑AAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGTGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGa                                                    <  2:535147/140‑1 (MQ=255)                                                                                           tACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCG‑AAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGTGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGAtt                                              >  2:722417/1‑140 (MQ=255)                                                                                                aTAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCG‑AAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGTGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGcc                                         >  1:514850/1‑140 (MQ=255)                                                                                                 tAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCG‑AAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGTGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCa                                        <  2:448819/140‑1 (MQ=255)                                                                                                 tAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCG‑AAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGTGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCa                                        <  1:749352/140‑1 (MQ=255)                                                                                                  aaaaaaGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCG‑AAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGTGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCAt                                       >  1:1395966/1‑140 (MQ=255)                                                                                                  aaaaaaGTCGCTCTCGCATAAAATATACGCTTGCACCCTGCG‑AAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGTGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCAt                                       >  2:1238195/1‑140 (MQ=255)                                                                                                   aaaaaGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCG‑AAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGTGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCAtt                                      <  1:1442506/140‑1 (MQ=255)                                                                                                    aaaaGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCG‑AAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGTGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTc                                     >  2:533940/1‑140 (MQ=255)                                                                                                    aaaaGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCG‑AAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGTGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTc                                     >  1:1362779/1‑140 (MQ=255)                                                                                                     aaaGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCG‑AAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGTGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCg                                    >  2:1039942/1‑140 (MQ=255)                                                                                                      aaGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCG‑AAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGTGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCgg                                   <  1:828203/140‑1 (MQ=255)                                                                                                      aaGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCG‑AAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGTGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCgg                                   <  2:239781/140‑1 (MQ=255)                                                                                                        gTCGCTCTCGCATAAAATTTACACTTGCACCCTGCG‑AAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGTGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGtt                                 <  1:996195/140‑1 (MQ=255)                                                                                                           gCTCTCGCATAAAATTTACACTTGCACCCTGCG‑AAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGTGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTccc                              <  1:722417/140‑1 (MQ=255)                                                                                                           gCTCTCGCATAAAATTTACACTTGCACCCTGCG‑AAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGTGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTccc                              <  1:1409738/140‑1 (MQ=255)                                                                                                           gCTCTCGCATAAAATTTACACTTGCACCCTGCG‑AAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGTGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTccc                              <  1:1206803/140‑1 (MQ=255)                                                                                                            ctctCGCATAAAATTTACACTTGCACCCTGCG‑AAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGTGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCt                             >  2:432697/1‑140 (MQ=255)                                                                                                               tcGCATAAAATTTACACTTGCACCCTGCG‑AAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGTGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCtata                          <  2:492481/140‑1 (MQ=255)                                                                                                               tcGCATAAAATTTACACTTGCACCCTGCG‑AAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGTGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCtata                          <  2:514850/140‑1 (MQ=255)                                                                                                                cGCATAAAATTTACACTTGCACCCTGCG‑AAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGTGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTatat                         >  2:1107446/1‑140 (MQ=255)                                                                                                                cGCATAAAATTTACACTTGCACCCTGCG‑AAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGTGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTatat                         <  1:533940/140‑1 (MQ=255)                                                                                                                         tttACACTTGCACCCTGCG‑AAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGTGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCa                >  2:616372/1‑140 (MQ=255)                                                                                                                           tACACTTGCACCCTGCG‑AAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGTGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCAcc              <  1:1039942/140‑1 (MQ=255)                                                                                                                                 tGCACCCTGCG‑AAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGTGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGaa        >  2:1392930/1‑140 (MQ=255)                                                                                                                                 tGCACCCTGCG‑AAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGTGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGaa        <  2:1041289/140‑1 (MQ=255)                                                                                                                                  gCACCCTGCG‑AAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGTGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGaaa       <  2:1163317/140‑1 (MQ=255)                                                                                                                                     cccTGCG‑AAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGTGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAAc    <  2:1077258/140‑1 (MQ=255)                                                                                                                                       cTGCG‑AAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGTGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGt  >  2:1111855/1‑140 (MQ=255)                                                                                                                                            |                                                                                                                                        GTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCATAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCGAAAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGTGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGT  >  NC_000913/2949049‑2949323

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑