BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,211,996	C→G	W3S (TGG→TCG)	iraM ←	anti‑adaptor protein IraM, inhibitor of sigma(S) proteolysis

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,211,996	0	C	G	100.0%	551.2 / NA	143	W3S (TGG→TCG)	iraM	anti‑adaptor protein IraM, inhibitor of sigma(S) proteolysis
Reads supporting (aligned to +/- strand): ref base C (0/0); new base G (56/87); total (56/87)

Only 100 of 143 total aligned reads displayed.

GACTTAACCGGTGTAAATATACTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACCACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTACCCCCCCCTCAAAAAAATAAATTAATTAAAATGATGGCTTATATAAAATA  >  NC_000913/1211861‑1212130

gACTTAACCGGTGTAAATATACTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACCACATGTAGGTTGAATTACCGTGTCAATTACTATCGACtt                                                                                                                                    >  1:1190108/1‑140 (MQ=255)

   ttAACCGGTGTAAATATACTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACCACATGTAGGTTGAATTACCGTGTCAATTACTATCGACTTCAt                                                                                                                                 <  2:1359316/140‑1 (MQ=255)

   ttAACCGGTGTAAATATACTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACCACATGTAGGTTGAATTACCGTGTCAATTACTATCGACTTCAt                                                                                                                                 >  2:200487/1‑140 (MQ=255)

   ttAACCGGTGTAAATATACTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACCACATGTAGGTTGAATTACCGTGTCAATTACTATCGACTTCAt                                                                                                                                 <  1:13692/140‑1 (MQ=255)

     aaCCGGTGTAAATATACTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACCACATGTAGGTTGAATTACCGTGTCAATTACTATCGACTTCAttt                                                                                                                               >  1:629187/1‑140 (MQ=255)

     aaCCGGTGTAAATATACTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACCACATGTAGGTTGAATTACCGTGTCAATTACTATCGACTTCAttt                                                                                                                               >  2:918986/1‑140 (MQ=255)

     aaCCGGTGTAAATATACTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACCACATGTAGGTTGAATTACCGTGTCAATTACTATCGACTTCAttt                                                                                                                               >  2:671925/1‑140 (MQ=255)

       ccGGTGTAAATATACTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACCACATGTAGGTTGAATTACCGTGTCAATTACTATCGACTTCATTTGt                                                                                                                             >  1:600518/1‑140 (MQ=255)

       ccGGTGTAAATATACTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACCACATGTAGGTTGAATTACCGTGTCAATTACTATCGACTTCATTTGt                                                                                                                             >  1:196143/1‑140 (MQ=255)

        cGGTGTAAATATACTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACCACATGTAGGTTGAATTACCGTGTCAATTACTATCGACTTCATTTGtt                                                                                                                            <  2:833621/140‑1 (MQ=255)

        cGGTGTAAATATACTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACCACATGTAGGTTGAATTACCGTGTCAATTACTATCGACTTCATTTGtt                                                                                                                            <  1:709406/140‑1 (MQ=255)

         ggTGTAAATATACTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACCACATGTAGGTTGAATTACCGTGTCAATTACTATCGACTTCATTTGTTa                                                                                                                           <  1:10704/140‑1 (MQ=255)

           tgtAAATATACTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACCACATGTAGGTTGAATTACCGTGTCAATTACTATCGACTTCATTTGTTATg                                                                                                                         >  1:1413898/1‑140 (MQ=255)

              aaaTATACTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACCACATGTAGGTTGAATTACCGTGTCAATTACTATCGACTTCATTTGTTATGTCt                                                                                                                      <  1:619847/140‑1 (MQ=255)

                atatatTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCACATTACCCCATATGGCTGAAAAAGATATACCACATGTAGGTTGAATTACCGTGTCAATTACTATCGACTTCATTTGTTATGTCTTa                                                                                                                    >  2:429086/1‑140 (MQ=255)

                    ctggcaaggaggGAGAAATATAGTAGATTGATCCCAGATGATCATTTTCATATTCCCCCATATGGTTGAAAAAGATATCCCCCATGTAGG‑TGAATTACCGTGTCAATTACTATCGACTTCATTTGTTATGTCTTATCCCa                                                                                                               <  2:843381/134‑1 (MQ=255)

                    aCTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACCACATGTAGGTTGAATTACCGTGTCAATTACTATCGACTTCATTTGTTATGTCTTATccc                                                                                                                >  1:509388/1‑140 (MQ=255)

                     cTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACCACATGTAGGTTGAATTACCGTGTCAATTACTATCGACTTCATTTGTTATGTCTTATCCCa                                                                                                               <  2:461565/140‑1 (MQ=255)

                     cTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACCACATGTAGGTTGAATTACCGTGTCAATTACTATCGACTTCATTTGTTATGTCTTATCCCa                                                                                                               <  1:547609/140‑1 (MQ=255)

                     cTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACCACATGTAGGTTGAATTACCGTGTCAATTACTATCGACTTCATTTGTTATGTCTTATCCCa                                                                                                               <  1:709209/140‑1 (MQ=255)

                     cTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACCACATGTAGGTTGAATTACCGTGTCAATTACTATCGACTTCATTTGTTATGTCTTATCCCa                                                                                                               <  1:374949/140‑1 (MQ=255)

                     cTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACCACATGTAGGTTGAATTACCGTGTCAATTACTATCGACTTCATTTGTTATGTCTTATCCCa                                                                                                               <  1:988981/140‑1 (MQ=255)

                     cTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACCACATGTAGGTTGAATTACCGTGTCAATTACTATCGACTTCATTTGTTATGTCTTATCCCa                                                                                                               >  2:1112439/1‑140 (MQ=255)

                     cTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACCACATGTAGGTTGAATTACCGTGTCAATTACTATCGACTTCATTTGTTATGTCTTATCCCa                                                                                                               <  2:1160210/140‑1 (MQ=255)

                     cTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACCACATGTAGGTTGAATTACCGTGTCAATTACTATCGACTTCATTTGTTATGTCTTATCCCa                                                                                                               <  1:224242/140‑1 (MQ=255)

                     cTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACCACATGTAGGTTGAATTACCGTGTCAATTACTATCGACTTCATTTGTTATGTCTTATCCCa                                                                                                               <  1:1005888/140‑1 (MQ=255)

                     cTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACCACATGTAGGTTGAATTACCGTGTCAATTACTATCGACTTCATTTGTTATGTCTTATCCCa                                                                                                               >  2:874582/1‑140 (MQ=255)

                     cTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACCACATGTAGGTTGAATTACCGTGTCAATTACTATCGACTTCATTTGTTATGTCTTATCCCa                                                                                                               <  2:810155/140‑1 (MQ=255)

                     cTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACCACATGTAGGTTGAATTACCGTGTCAATTACTATCGACTTCATTTGTAATGTCTTATCCCa                                                                                                               <  1:55341/140‑1 (MQ=255)

                     cTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACCACATGTAGGTTGAATTACCATGTCAATTACTATCGACTTCATTTGTTATGTCTTATCCCa                                                                                                               >  1:938646/1‑140 (MQ=255)

                      tGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACCACATGTAGGTTGAATTACCGTGTCAATTACTATCGACTTCATTTGTTATGTCTTATCCCAc                                                                                                              <  2:1333300/140‑1 (MQ=255)

                      tGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACCACATGTAGGTTGAATTACCGTGTCAATTACTATCGACTTCATTTGTTATGTCTTATCCCAc                                                                                                              <  1:671925/140‑1 (MQ=255)

                      tGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCAAATGGCTGAAAAAGATATACCACATGTAGGTTGAATTACCGTGTCAATTACTATCGACTTCATTTGTTATGTCTTATCCCAc                                                                                                              <  2:944194/140‑1 (MQ=255)

                       gCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACCACATGTAGGTTGAATTACCGTGTCAATTACTATCGACTTCATTTGTTATGTCTTATCCCACg                                                                                                             <  2:1123721/140‑1 (MQ=255)

                       gCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACCACATGTAGGTTGAATTACCGTGTCAATTACTATCGACTTCATTTGTTATGTCTTATCCCACg                                                                                                             <  2:1027848/140‑1 (MQ=255)

                       gCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACCACATGTAGGTTGAATTACCGTGTCAATTACTATCGACTTCATTTGTTATGTCTTATCCCACg                                                                                                             <  1:30716/140‑1 (MQ=255)

                       gCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACCACATGTAGGTTGAATTACCGTGTCAATTACTATCGACTTCATTTGTTATGTCTTATCCCACg                                                                                                             <  1:923699/140‑1 (MQ=255)

                       gCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACCACATGTAGGTTGAATTACCGTGTCAATTACTATCGACTTCATTTGTTATGTCTTATCCCACg                                                                                                             <  1:906410/140‑1 (MQ=255)

                       gCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACCACATGTAGGTTGAATTACCGTGTCAATTACTATCGACTTCATTTGTTATGTCTTATCCCACg                                                                                                             >  1:801930/1‑140 (MQ=255)

                       gCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACCACATGTAGGTTGAATTACCGTGTCAATTACTATCGACTTCATTTGTTATGTCTTATCCCACg                                                                                                             >  1:769730/1‑140 (MQ=255)

                       gCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACCACATGTAGGTTGAATTACCGTGTCAATTACTATCGACTTCATTTGTTATGTCTTATCCCACg                                                                                                             <  2:600518/140‑1 (MQ=255)

                       gCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACCACATGTAGGTTGAATTACCGTGTCAATTACTATCGACTTCATTTGTTATGTCTTATCCCACg                                                                                                             <  1:1299670/140‑1 (MQ=255)

                       gCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACCACATGTAGGTTGAATTACCGTGTCAATTACTATCGACTTCATTTGTTATGTCTTATCCCACg                                                                                                             <  2:1187532/140‑1 (MQ=255)

                       gCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACCACATGTAGGTTGAATTACCGTGTCAATTACTATCGACTTCATTTGTTATGTCTTATCCCACg                                                                                                             >  2:121881/1‑140 (MQ=255)

                       gCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACCACATGTAGGTTGAATTACCGTGTCAATTACTATCGACTTCATTTGTTATGTCTTATCCCACg                                                                                                             <  2:196143/140‑1 (MQ=255)

                       gCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGACCATTTTCATATTACCCCATATGGCTGAAAAAGATATACCACATGTAGGTTGAATTACCGTGTCAATTACTATCGACTTCATTTGTTATGTCTTATCCCACg                                                                                                             <  1:1329847/140‑1 (MQ=255)

                        ccAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACCACATGTAGGTTGAATTACCGTGTCAATTACTATCGACTTCATTTGTTATGTCTTATCCCACgg                                                                                                            >  2:631398/1‑140 (MQ=255)

                         cAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACCACATGTAGGTTGAATTACCGTGTCAATTACTATCGACTTCATTTGTTATGTCTTATCCCACGGt                                                                                                           <  2:608024/140‑1 (MQ=255)

                          aggaggGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACCACATGTAGGTTGAATTACCGTGTCAATTACTATCGACTTCATTTGTTATGTCTTATCCCACGGTa                                                                                                          <  2:629187/140‑1 (MQ=255)

                                gagaAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACCACATGTAGGTTGAATTACCGTGTCAATTACTATCGACTTCATTTGTTATGTCTTATCCCa                                                                                                               <  2:1344972/129‑1 (MQ=255)

                                gagaAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACCACATGTAGGTTGAATTACCGTGTCAATTACTATCGACTTCATTTGTTATGTCTTATCCCa                                                                                                               >  1:1344972/1‑129 (MQ=255)

                                 agaAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACCACATGTAGGTTGAATTACCGTGTCAATTACTATCGACTTCATTTGTTATGTCTTATCCCACGGTATTTAata                                                                                                   <  1:562456/140‑1 (MQ=255)

                                     atatAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACCACATGTAGGTTGAATTACCGTGTCAATTACTATCGACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGt                                                                                               <  2:566789/140‑1 (MQ=255)

                                         agtagATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACCACATGTAGGTTGAATTACCGTGTCAATTACTATCGACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCAt                                                                                           <  1:1112439/140‑1 (MQ=255)

                                          gtagATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACCACATGTAGGTTGAATTACCGTGTCAATTTCTATCGACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCAtt                                                                                          >  2:1289984/1‑140 (MQ=255)

                                          gtagATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACCACATGTAGGTTGAATTACCGTGTCAATTACTATCGACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCAtt                                                                                          <  2:688544/140‑1 (MQ=255)

                                          gtagATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACCACATGTAGGTTGAATTACCGTGTCAATTACTATCGACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCAtt                                                                                          <  1:631398/140‑1 (MQ=255)

                                          gtagATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACCACATGTAGGTTGAATTACCGTGTCAATTACTATCGACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCAtt                                                                                          >  2:36696/1‑140 (MQ=255)

                                          gtagATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACCACATGTAGGTTGAATTACCGTGTCAATTACTATCGACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCAtt                                                                                          >  1:507253/1‑140 (MQ=255)

                                            agATTGATACCAGATGATCATTTTCACATTACCCCATATGGCTGAAAAAGATATACCACATGTAGGTTGAATTACCGTGTCAATTACTATCGACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAg                                                                                        <  1:429086/140‑1 (MQ=255)

                                             gATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACCACATGTAGGTTGAATTACCGTGTCAATTACTATCGACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAgg                                                                                       >  1:35797/1‑140 (MQ=255)

                                                tGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACCACATGTAGGTTGAATTACCGTGTCAATTACTATCGACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATg                                                                                    >  1:1075672/1‑140 (MQ=255)

                                                tGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACCACATGTAGGTTGAATTACCGTGTCAATTACTATCGACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATg                                                                                    >  2:1144378/1‑140 (MQ=255)

                                                  aTACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACCACATGTAGGTTGAATTACCGTGTCAATTACTATCGACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGtt                                                                                  >  1:875713/1‑140 (MQ=255)

                                                  aTACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACCACATGTAGGTTGAATTACCGTGTCAATTACTATCGACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGtt                                                                                  >  1:916455/1‑140 (MQ=255)

                                                     ccAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACCACATGTAGGTTGAATTACCGTGTCAATTACTATCGACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTAt                                                                               >  2:251137/1‑140 (MQ=255)

                                                        gatgatCATTTTCATATTACCCCATATGGCTGAAAAAGATATACCACATGTAGGTTGAATTACCGTGTCAATTACTATCGACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTc                                                                            >  1:234180/1‑140 (MQ=255)

                                                        gatgatCATTTTCATATTACCCCATATGGCTGAAAAAGATATACCACATGTAGGTTGAATTACCGTGTCAATTACTATCGACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTc                                                                            >  1:271255/1‑140 (MQ=255)

                                                        gatgatCATTTTCATATTACCCCATATGGCTGAAAAAGATATACCACATGTAGGTTGAATTACCGTGTCAATTACTATCGACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTc                                                                            >  2:1162200/1‑140 (MQ=255)

                                                          tgatCATTTTCATATTACCCCATATGGCTGAAAAAGATATACCACATGTAGGTTGAATTACCGTGTCAATTACTATCGACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCtt                                                                          >  1:958710/1‑140 (MQ=255)

                                                              cATTTTCATATTACCCCATATGGCTGAAAAAGATATACCACATGTAGGTTGAATTACCGTGTCAATTACTATCGACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGAtt                                                                      <  1:495627/140‑1 (MQ=255)

                                                              cATTTTCATATTACCCCATATGGCTGAAAAAGATATACCACATGTAGGTTGAATTACCGTGTCAATTACTATCGACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGAtt                                                                      <  2:769730/140‑1 (MQ=255)

                                                                   tCATATTACCCCATATGGCTGAAAAAGATATACCACATGTAGGTTGAATTACCGTGTCAATTACTATCGACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCa                                                                 >  1:1339484/1‑140 (MQ=255)

                                                                   tCATATTACCCCATATGGCTGAAAAAGATATACCACATGTAGGTTGAATTACCGTGTCAATTACTATCGACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCa                                                                 <  1:488324/140‑1 (MQ=255)

                                                                   tCATATTACCCCATATGGCTGAAAAAGATATACCACATGTAGGTTGAATTACCGTGTCAATTACTATCGACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCa                                                                 <  1:469163/140‑1 (MQ=255)

                                                                   tCATATTACCCCATATGGCTGAAAAAGATATACCACATGTAGGTTGAATTACCATGTCAATTACTATCGACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCa                                                                 <  2:938646/140‑1 (MQ=255)

                                                                      tatTACCCCATATGGCTGAAAAAGATATACCACATGTAGGTTGAATTACCGTGTCAATTACTATCGACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCatat                                                              <  2:435072/140‑1 (MQ=255)

                                                                      tatTACCCCATATGGCTGAAAAAGATATACCACATGTAGGTTGAATTACCGTGTCAATTACTATCGACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCatat                                                              <  2:47491/140‑1 (MQ=255)

                                                                      tatTACCCCATATGGCTGAAAAAGATATACCACATGTAGGTTGAATTACCGTGTCAATTACTATCGACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCatat                                                              <  2:507253/140‑1 (MQ=255)

                                                                      tatTACCCCATATGGCTGAAAAAGATATACCACATGTAGGTTGAATTACCGTGTCAATTACTATCGACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCatat                                                              <  2:234180/140‑1 (MQ=255)

                                                                      tatTACCCCATATGGCTGAAAAAGATATACCACATGTAGGTTGAATTACCGTGTCAATTACTATCGACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCatat                                                              <  2:317449/140‑1 (MQ=255)

                                                                       atTACCCCATATGGCTGAAAAAGATATACCACATGTAGGTTGAATTACCGTGTCAATTACTATCGACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATg                                                             <  1:153224/140‑1 (MQ=255)

                                                                         tACCCCATATGGCTGAAAAAGATATACCACATGTAGGTTGAATTACCGTGTCAATTACTATCGACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAg                                                           <  2:610622/140‑1 (MQ=255)

                                                                          aCCCCATATGGCTGAAAAAGATATACCACATGTAGGTTGAATTACCGTGTCAATTACTATCGACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGt                                                          <  1:200487/140‑1 (MQ=255)

                                                                                tatGGCTGAAAAAGATATACCACATGTAGGTTGAATTACCGTGTCAATTACTATCGACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTa                                                    >  2:689174/1‑140 (MQ=255)

                                                                                     cTGAAAAAGATATACCACATGTAGGTTGAATTACCGTGTCAATTACTATCGACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTAccccc                                               >  2:1262998/1‑140 (MQ=255)

                                                                                     cTGAAAAAGATATACCACATGTAGGTTGAATTACCGTGTCAATTACTATCGACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTAccccc                                               >  1:962466/1‑140 (MQ=255)

                                                                                                  aCCACATGTAGGTTGAATTACCGTGTCAATTACTATCGACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTACCCCCCCCTCAAAAaaat                                  >  2:272812/1‑140 (MQ=255)

                                                                                                      caTGTAGGTTGAATTACCGTGTCAATTACTATCGACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTACCCCCCCCTCAAAAaaataaat                              <  2:503693/140‑1 (MQ=255)

                                                                                                        tGTAGGTTGAATTACCGTGTCAATTACTATCGACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTACCCCCCCCTCAAAAAAATAaatta                            >  2:756537/1‑140 (MQ=255)

                                                                                                           aGGTTGAATTACCGTGTCAATTACTATCGACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTACCCCCCCCTCAAAAAAATAaattaatt                         >  1:1322459/1‑140 (MQ=255)

                                                                                                                 aaTTACCGTGTCAATTACTATCGACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTACCCCCCCCTCAAAAAAATAAATTAATTAAAatg                   <  1:36696/140‑1 (MQ=255)

                                                                                                                 aaTTACCGTGTCAATTACTATCGACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTACCCCCCCCTCAAAAAAATAAATTAATTAAAatg                   <  2:75841/140‑1 (MQ=255)

                                                                                                                 aaTTACCGTGTCAATTACTATCGACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTACCCCCCCCTCAAAAAAATAAATTAATTAAAatg                   <  1:1144378/140‑1 (MQ=255)

                                                                                                                 aaTTACCGTGTCAATTACTATCGACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTACCCCCCCCTCAAAAAAATAAATTAATTAAAatg                   <  2:916455/140‑1 (MQ=255)

                                                                                                                      ccGTGTCAATTACTATCGACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTACCCCCCCCTCAAAAAAATAAATTAATTAAAATGATGGc              <  1:121881/140‑1 (MQ=255)

                                                                                                                           tCAATTACTATCGACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTACCCCCCCCTCAAAAAAATAAATTAATTAAAatg                   >  2:502535/1‑130 (MQ=255)

                                                                                                                                  cTATCGACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTACCCCCCCCTCAAAAAAATAAATTAATTAAAATGATGGCTTATataaaata  <  2:35797/140‑1 (MQ=255)

                                                                                                                                  cTATCGACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTACCCCCCCCTCAAAAAAATAAATTAATTAAAATGATGGCTTATataaaata  <  2:201579/140‑1 (MQ=255)

                                                                                                                                  cTATCGACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTACCCCCCCCTCAAAAAAATAAATTAATTAAAATGATGGCTTATataaaata  <  2:271255/140‑1 (MQ=255)

GACTTAACCGGTGTAAATATACTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACCACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTACCCCCCCCTCAAAAAAATAAATTAATTAAAATGATGGCTTATATAAAATA  >  NC_000913/1211861‑1212130

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`