BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
MC JC	NC_000913	257,908	Δ776 bp		insB9–[crl]	insB9, insA9, [crl]

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	257908–258675	258683	9–776	94 [0]	[0] 93	insB9–[crl]	insB9,insA9,[crl]

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 257907	0 (0.000)	78 (0.650)	56/260	0.6	100%	intergenic (+8/+16)	crl/insB9	RNA polymerase holoenzyme assembly factor Crl/IS1 transposase B
*	?	NC_000913	258684 =	0 (0.000)	78 (0.650)	56/260	0.6	100%	pseudogene (9/331 nt)	crl	RNA polymerase holoenzyme assembly factor Crl

GCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGC‑‑‑‑TGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGTT  >  NC_000913/258547‑258822

aaaatttgctaaattttgccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGt                                                                                                                                              <  1:635010‑M2/3‑1 (MQ=255)

 aaatttgctaaattttgccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTg                                                                                                                                             <  1:798567‑M2/4‑1 (MQ=255)

   atttgctaaattttgccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCa                                                                                                                                           <  1:1998118‑M2/6‑1 (MQ=255)

   atttgctaaattttgccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCa                                                                                                                                           <  1:1378107‑M2/6‑1 (MQ=255)

      tgctaaattttgccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAg                                                                                                                                        <  1:1089175‑M2/9‑1 (MQ=255)

      tgctaaattttgccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAg                                                                                                                                        >  1:2151206‑M2/132‑140 (MQ=255)

       gctaaattttgccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGa                                                                                                                                       <  1:1265306‑M2/10‑1 (MQ=255)

       gctaaattttgccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGa                                                                                                                                       >  1:1835456‑M2/131‑140 (MQ=255)

                            aaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTg                                                                                                                  <  1:1806112‑M2/31‑1 (MQ=255)

                             aaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGt                                                                                                                 <  1:107598‑M2/32‑1 (MQ=255)

                             aaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGt                                                                                                                 <  2:1001156‑M2/32‑1 (MQ=255)

                               acagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCt                                                                                                               <  1:1263984‑M2/34‑1 (MQ=255)

                                 agttgcatcacaacaggagatagcaatgacgttaccgggtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTgg                                                                                                             >  2:1752795‑M2/105‑140 (MQ=255)

                                 agttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTgg                                                                                                             <  2:37235‑M2/36‑1 (MQ=255)

                                   ttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGC‑‑‑‑t                                                                                                       <  1:65551‑M2/38‑1 (MQ=255)

                                           caacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGC‑‑‑‑TGTATGCGt                                                                                               >  1:598448‑M2/95‑140 (MQ=255)

                                           caacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGC‑‑‑‑TGTATGCGt                                                                                               <  2:598448‑M2/46‑1 (MQ=255)

                                              caggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGC‑‑‑‑TGTATGCGTCaa                                                                                            >  2:1130871‑M2/92‑140 (MQ=255)

                                                   gatagcaatgacgttaccgagtggacacccgaagagcggattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTC‑TTTTCGATTGTCTGGC‑‑‑‑TGTATGCGTCAACGTGaa                                                                                      >  2:328984‑M2/87‑140 (MQ=255)

                                                   gatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGC‑‑‑‑TGTATGCGTCAACGTGa                                                                                       >  1:2149222‑M2/87‑140 (MQ=255)

                                                    atagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGC‑‑‑‑TGTATGCGTCAACGTGaa                                                                                      >  2:1829445‑M2/86‑140 (MQ=255)

                                                     tagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGC‑‑‑‑TGTATGCGTCAACGTGaaa                                                                                     <  1:1756211‑M2/56‑1 (MQ=255)

                                                      agcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGC‑‑‑‑TGTATGCGTCAACGTGAAAc                                                                                    >  1:249704‑M2/84‑140 (MQ=255)

                                                      agcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGC‑‑‑‑TGTATGCGTCAACGTGAAAc                                                                                    >  1:2069032‑M2/84‑140 (MQ=255)

                                                        caatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGC‑‑‑‑TGTATGCGTCAACGTGAAACCg                                                                                  >  1:2133270‑M2/82‑140 (MQ=255)

                                                           tgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGC‑‑‑‑TGTATGCGTCAACGTGAAAcc                                                                                   <  1:2166004‑M2/58‑1 (MQ=255)

                                                           tgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGC‑‑‑‑TGTATGCGTCAACGTGAAAcc                                                                                   >  2:2166004‑M2/79‑136 (MQ=255)

                                                           tgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGC‑‑‑‑TGTATGCGTCAACGTGAAACCGGCa                                                                               <  1:1989674‑M2/62‑1 (MQ=255)

                                                           tgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGC‑‑‑‑TGTATGCGTCAACGTGAAACCGGCa                                                                               <  2:249704‑M2/62‑1 (MQ=255)

                                                           tgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGC‑‑‑‑TGTATGCGTCAACGTGAAACCGGCa                                                                               >  1:1465837‑M2/79‑140 (MQ=255)

                                                            gacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGC‑‑‑‑TGTATGCGTCAACGTGAAACCGGCAc                                                                              >  1:1460004‑M2/78‑140 (MQ=255)

                                                             acgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGTATGCGTCAACGTGAAACCgg                                                                                 >  1:1768926‑M2/77‑140 (MQ=255)

                                                             acgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGC‑‑‑‑TGTATGCGTCAACGTGAAACCGGCAcc                                                                             >  2:1135870‑M2/77‑140 (MQ=255)

                                                               gttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGC‑‑‑‑TGTATGCGTCAACGTGAAACCGGCACCgg                                                                           <  2:1465837‑M2/66‑1 (MQ=255)

                                                               gttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGC‑‑‑‑TGTATGCGTCAACGTGAAACCGGCACCgg                                                                           <  2:2133270‑M2/66‑1 (MQ=255)

                                                                 taccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGC‑‑‑‑TGTATGCGTCAACGTGAAACCGGCACCGGaa                                                                         <  2:1889196‑M2/68‑1 (MQ=255)

                                                                  accgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGC‑‑‑‑TGTATGCGTCAACGTGAAACCGGCACCGGAAg                                                                        >  2:1496732‑M2/72‑140 (MQ=255)

                                                                       gtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGC‑‑‑‑TGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGt                                                                   <  2:646755‑M2/74‑1 (MQ=255)

                                                                        tggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGC‑‑‑‑TGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTg                                                                  <  2:2151206‑M2/75‑1 (MQ=255)

                                                                        tggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGC‑‑‑‑TGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTg                                                                  <  2:1460004‑M2/75‑1 (MQ=255)

                                                                        tggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGC‑‑‑‑TGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTg                                                                  >  2:83732‑M2/66‑140 (MQ=255)

                                                                        tggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGAC‑‑‑‑TGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTg                                                                  <  2:716959‑M2/75‑1 (MQ=255)

                                                                             acccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGC‑‑‑‑TGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTc                                                             >  1:1004812‑M2/61‑140 (MQ=255)

                                                                                  aagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGC‑‑‑‑TGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTgggg                                                        <  2:1776438‑M2/85‑1 (MQ=255)

                                                                                  aagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGC‑‑‑‑TGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTgggg                                                        >  1:1272959‑M2/56‑140 (MQ=255)

                                                                                  aagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGC‑‑‑‑TGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTgggg                                                        <  1:1496732‑M2/85‑1 (MQ=255)

                                                                                      gcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTgggg                                                        <  2:1768926‑M2/89‑1 (MQ=255)

                                                                                         gattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGC‑‑‑‑TGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCtggtgg                                                 >  2:2089341‑M2/49‑140 (MQ=255)

                                                                                         gattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGC‑‑‑‑TGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCtggtgg                                                 <  1:1493641‑M2/92‑1 (MQ=255)

                                                                                         gattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGC‑‑‑‑TGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCtg                                                     <  1:375576‑M2/88‑1 (MQ=255)

                                                                                         gattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGC‑‑‑‑TGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCtg                                                     >  2:375576‑M2/49‑136 (MQ=255)

                                                                                          attgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGC‑‑‑‑TGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGtgga                                                <  1:1135870‑M2/93‑1 (MQ=255)

                                                                                          attgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGC‑‑‑‑TGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGtgga                                                <  2:2069032‑M2/93‑1 (MQ=255)

                                                                                           ttgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGC‑‑‑‑TGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGtggat                                               <  1:1130871‑M2/94‑1 (MQ=255)

                                                                                            tgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGC‑‑‑‑TGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGtggatg                                              >  1:1309396‑M2/46‑140 (MQ=255)

                                                                                             gatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGC‑‑‑‑TGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGtggatgg                                             >  1:551081‑M2/45‑140 (MQ=255)

                                                                                                 aaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGC‑‑‑‑TGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCtggtgg                                                 <  1:2115229‑M2/92‑1 (MQ=255)

                                                                                                 aaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGC‑‑‑‑TGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCtggtgg                                                 >  2:2115229‑M2/41‑132 (MQ=255)

                                                                                                   aaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGC‑‑‑‑TGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTgg                                       <  2:1309396‑M2/102‑1 (MQ=255)

                                                                                                        ttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGC‑‑‑‑TGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAgcg                                  >  2:225992‑M2/34‑140 (MQ=255)

                                                                                                        ttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGC‑‑‑‑TGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAgcg                                  <  1:347857‑M2/107‑1 (MQ=255)

                                                                                                              cactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGC‑‑‑‑TGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGaa                            <  2:1835456‑M2/113‑1 (MQ=255)

                                                                                                                    gcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGC‑‑‑‑TGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGt                      <  1:83732‑M2/119‑1 (MQ=255)

                                                                                                                        gtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGC‑‑‑‑TGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTa                  >  1:1988006‑M2/18‑140 (MQ=255)

                                                                                                                         tatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGC‑‑‑‑TGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTAc                 >  2:1172593‑M2/17‑140 (MQ=255)

                                                                                                                         tatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGC‑‑‑‑TGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTAc                 <  2:2149222‑M2/124‑1 (MQ=255)

                                                                                                                         tatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGC‑‑‑‑TGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTAc                 >  2:1184422‑M2/17‑140 (MQ=255)

                                                                                                                         tatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGC‑‑‑‑TGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTAc                 <  1:1829445‑M2/124‑1 (MQ=255)

                                                                                                                         tatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGC‑‑‑‑TGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTAc                 <  1:1184422‑M2/124‑1 (MQ=255)

                                                                                                                         tatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGC‑‑‑‑TGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTAc                 >  2:372317‑M2/17‑140 (MQ=255)

                                                                                                                             ttcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGC‑‑‑‑TGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTa              >  2:193467‑M2/13‑139 (MQ=255)

                                                                                                                             ttcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGC‑‑‑‑TGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTa              <  1:193467‑M2/127‑1 (MQ=255)

                                                                                                                             ttcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGC‑‑‑‑TGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTAc             >  2:1775288‑M2/13‑140 (MQ=255)

                                                                                                                              tcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGC‑‑‑‑TGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACa            >  2:1057018‑M2/12‑140 (MQ=255)

                                                                                                                               cgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGC‑‑‑‑TGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAg           >  1:1469152‑M2/11‑140 (MQ=255)

                                                                                                                               cgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGC‑‑‑‑TGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAg           >  2:2150923‑M2/11‑140 (MQ=255)

                                                                                                                               cgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGC‑‑‑‑TGTATGCGTCAACGTGAAACCAGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAg           >  2:1471930‑M2/11‑140 (MQ=255)

                                                                                                                                gtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGC‑‑‑‑TGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGt          >  1:550511‑M2/10‑140 (MQ=255)

                                                                                                                                  gaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGC‑‑‑‑TGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTa        <  1:1083537‑M2/133‑1 (MQ=255)

                                                                                                                                  gaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGC‑‑‑‑TGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTa        <  1:225992‑M2/133‑1 (MQ=255)

                                                                                                                                  gaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGC‑‑‑‑TGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTa        <  2:1591105‑M2/133‑1 (MQ=255)

                                                                                                                                   aaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGC‑‑‑‑TGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTa        >  2:1118650‑M2/7‑139 (MQ=255)

                                                                                                                                   aaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGC‑‑‑‑TGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTa        <  1:1118650‑M2/133‑1 (MQ=255)

                                                                                                                                   aaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGC‑‑‑‑TGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTAc       >  2:1139537‑M2/7‑140 (MQ=255)

                                                                                                                                   aaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGC‑‑‑‑TGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTAc       >  1:1798199‑M2/7‑140 (MQ=255)

                                                                                                                                     ggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGC‑‑‑‑TGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCa     >  1:179957‑M2/5‑140 (MQ=255)

                                                                                                                                     ggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGC‑‑‑‑TGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCa     >  1:1530566‑M2/5‑140 (MQ=255)

                                                                                                                                     ggtaAGTGCAAAGATAATCGATTCTTTTTCGATCGTCTGGC‑‑‑‑TGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCa     >  1:772169‑M2/5‑140 (MQ=255)

                                                                                                                                      gtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGC‑‑‑‑TGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCT‑GGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGt   >  2:1848535‑M2/4‑140 (MQ=255)

                                                                                                                                       taAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGC‑‑‑‑TGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGt   <  2:1272959‑M2/138‑1 (MQ=255)

                                                                                                                                        aAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGC‑‑‑‑TGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTa        >  2:276243‑M2/2‑134 (MQ=255)

                                                                                                                                        aAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGC‑‑‑‑TGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTa        <  1:276243‑M2/133‑1 (MQ=255)

                                                                                                                                        aAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGC‑‑‑‑TGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGtt  >  2:73806‑M2/2‑140 (MQ=255)

GCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGC‑‑‑‑TGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGTT  >  NC_000913/258547‑258822

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`