| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,098,000 | G→T | S101Y (TCT→TAT) | wzzB ← | regulator of length of O‑antigen component of lipopolysaccharide chains |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,098,000 | 0 | G | T | 91.6% | 429.1 / 32.7 | 132 | S101Y (TCT→TAT) | wzzB | regulator of length of O‑antigen component of lipopolysaccharide chains |
| Reads supporting (aligned to +/- strand): ref base G (6/5); new base T (60/60); total (67/65) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 | |||||||||||
Only 100 of 132 total aligned reads displayed.
TGCGCCCTCTGCAGTTTGCCCAACATAAGAAACAGTCAATGGTAATTGCTGGTTCTTAACAGAAGGTTCGATGGTAAGTTTTTCTCGTTCTTCCTGATTATCCAGCGTTTCTGCTAATGCAGAGAAGGCAGAACTGAAGCGACCAATTAACGTCTCCTGCAAATCCGATACTTTCGGTGCAGCCTGACCATAGATAACATTCATGGCATTGTTATAGCCAGCAATTTGCCCCACGTCGGGCTGAGTGATAATTGCTGTTGACGTCC > NC_000913/2097870‑2098135 | tgCGCCCTCTGCAGTTTGCCCAACATAAGAAACAGTCAATGGTAATTGCTGGTTCTTAACAGAAGGTTCGATGGTAAGTTTTTCTCGTTCTTCCTGATTATCCAGCGTTTCTGCTAATGCAGAGAAGGCATAACTGAAGc < 2:609318/140‑1 (MQ=255)tgCGCCCTCTGCAGTTTGCCCAACATAAGAAACAGTCAATGGTAATTGCTGGTTCTTAACAGAAGGTTCGATGGTAAGTTTTTCTCGTTCTTCCTGATTATCCAGCGTTTCTGCTAATGCAGAGAAGGCATAACTGAAGc > 2:264399/1‑140 (MQ=255) gcgcCCTCTGCAGTTTGCCCAACATAAGAAACAGTCAATGGTAATTGCTGGTTCTTAACAGAAGGTTCGATGGTAAGTTTTTCTCGTTCTTCCTGATTATCCAGCGTTTCTGCTAATGCAGAGAAGGCATAACTGAAGCg < 1:122599/140‑1 (MQ=255) cgcCCTCTGCAGTTTGCCCAACATAAGAAACAGTCAATGGTAATTGCTGGTTCTTAACAGAAGGTTCGATGGTAAG‑TTTTCTCGTTCTTCCTGATTATCCAGCGTTTCTGCTAATGCAGAGAAGGCATAACTGAAGCGAc > 1:532323/1‑140 (MQ=255) gcCCTCTGCAGTTTGCCCAACATAAGAAACAGTCAATGGTAATTGCTGGTTCTTAACAGAAGGTTCGATGGTAAGTTTTTCTCGTTCTTCCTGATTATCCAGCGTTTCTGCTAATGCAGAGAAGGCATAACTGAAGCGAc < 1:836771/140‑1 (MQ=255) gcCCTCTGCAGTTTGCCCAACATAAGAAACAGTCAATGGTAATTGCTGGTTCTTAACAGAAGGTTCGATGGTAAGTTTTTCTCGTTCTTCCTGATTATCCAGCGTTTCTGCTAATGCAGAGAAGGCATAACTGAAGCGAc < 2:1164973/140‑1 (MQ=255) cccTCTGCAGTTTGCCCAACATAAGAAACAGTCAATGGTAATTGCTGGTTCTTAACAGAAGGTTCGATGGTAAGTTTTTCTCGTTCTTCCTGATTATCCAGCGTTTCTGCTAATGCAGAGAAGGCATAACTGAAGCGAcc < 2:775433/140‑1 (MQ=255) cccTCTGCAGTTTGCCCAACATAAGAAACAGTCAATGGTAATTGCTGGTTCTTAACAGAAGGTTCGATGGTAAGTTTTTCTCGTTCTTCCTGATTATCCAGCGTTTCTGCTAATGCAGAGAAGGCATAACTGAAGCGAcc < 1:1320007/140‑1 (MQ=255) cccTCTGCAGTTTGCCCAACATAAGAAACAGTCAATGGTAATTGCTGGTTCTTAACAGAAGGTTCGATGGTAAGTTTTTCTCGTTCTTCCTGATTATCCAGCGTTTCTGCTAATGCAGAGAAGGCATAACTGAAGCGAcc < 1:2085762/140‑1 (MQ=255) ctctGCAGTTTGCCCAACATAAGAAACAGTCAATGGTAATTGCTGGTTCTTAACAGAAGGTTCGATGGTAAGTTTTTCTCGTTCTTCCTGATTATCCAGCGTTTCTGCTAATGCAGAGAAGGCATAACTGAAGCGACCaa < 1:1327989/140‑1 (MQ=255) ctGCAGTTTGCCCAACATAAGAAACAGTCAATGGTAATTGCTGGTTCTTAACAGAAGGTTCGATGGTAAGTTTTTCTCGTTCTTCCTGATTATCCAGCGTTTCTGCTAATGCAGAGAAGGCAGAACTGAAGCGACCAAtt > 2:986575/1‑140 (MQ=255) tGCAGTTTGCCCAACATAAGAAACAGTCAATGGTAATTGCTGGTTCTTAACAGAAGGTTCGATGGTAAGTTTTTCTCGTTCTTCCTGATTATCCAGCGTTTCTGCTAATGCAGAGAAGGCATAACTGAAGCGACCAATTa > 1:440716/1‑140 (MQ=255) tGCAGTTTGCCCAACATAAGAAACAGTCAATGGTAATTGCTGGTTCTTAACAGAAGGTTCGATGGTAAGTTTTTCTCGTTCTTCCTGATTATCCAGCGTTTCTGCTAATGCAGAGAAGGCATAACTGAAGCGACCAATTa > 1:100956/1‑140 (MQ=255) ttGCCCAACATAAGAAACAGTCAATGGTAATTGCTGGTTCTTAACAGAAGGTTCGATGGTAAGTTTTTCTCGTTCTTCCTGATTATCCAGCGTTTCTGCTAATGCAGAGAAGGCATAACTGAAGCGACCAATTAACGtct > 1:1387899/1‑140 (MQ=255) gCCCAACATAAGAAACAGTCAATGGTAATTGCTGGTTCTTAACAGAAGGTTCGATGGTAAGTTTTTCTCGTTCTTCCTGACTATCCAGCGTTTCTGCTAATGCAGAGAAGGCATAACTGAAGCGACCAATTAACGTCTcc > 1:185296/1‑140 (MQ=255) aaGAAACAGTCAATGGTAATTGCTGGTTCTTAACAGAAGGTTCGATGGTAAGTTTTTCTCGTTCTTCCTGATTATCCAGCGTTTCTGCTAATGCAGAGAAGGCATAACTGAAGCGACCAATTAACGTCTCCTGCAAATcc > 2:1646241/1‑140 (MQ=255) gAAACAGTCAATGGTAATTGCTGGTTCTTAACAGAAGGTTCGATGGTAAG‑TTTTCTCGTTCTTCCTGATTATCCAGCGTTTCTGCTAATGCAGAGAAGGCATAACTGAAGCGACCAATTAACGTCTCCTGCAAATCCGAt < 2:532323/140‑1 (MQ=255) aaaCAGTCAATGGTAATTGCTGGTTCTTAACAGAAGGTTCGATGGTAAGTTTTTCTCGTTCTTCCTGATTATCCAGCGTTTCTGCTAATGCAGAGAAGGCATAACTGAAGCGACCAATTAACGTCTCCTGCAAATCCGAt < 1:1658069/140‑1 (MQ=255) aaaCAGTCAATGGTAATTGCTGGTTCTTAACAGAAGGTTCGATGGTAAGTTTTTCTCGTTCTTCCTGATTATCCAGCGTTTCTGCTAATGCAGAGAAGGCATAACTGAAGCGACCAATTAACGTCTCCTGCAAATCCGAt < 2:1543700/140‑1 (MQ=255) aCAGTCAATGGTAATTGCTGGTTCTTAACAGAAGGTTCGATGGTAAGTTTTTCTCGTTCTTCCTGATTATCCAGCGTTTCTGCTAATGCAGAGAAGGCATAACTGAAGCGACCAATTAACGTCTCCTGCAAATCCGATAc > 1:2127060/1‑140 (MQ=255) aGTCAATGGTAATTGCTGGTTCTTAACAGAAGGTTCGATGGTAAGTTTTTCTCGTTCTTCCTGATTATCCAGCGTTTCTGCTAATGCAGAGAAGGCATAACTGAAGCGACCAATTAACGTCTCCTGCAAATCCGATACtt > 1:1847124/1‑140 (MQ=255) aGTCAATGGTAATTGCTGGTTCTTAACAGAAGGTTCGATGGTAAGTTTTTCTCGTTCTTCCTGATTATCCAGCGTTTCTGCTAATGCAGAGAAGGCATAACTGAAGCGACCAATTAACGTCTCCTGCAAATCCGATACtt > 1:464741/1‑140 (MQ=255) aGTCAATGGTAATTGCTGGTTCTTAACAGAAGGTTCGATGGTAAGTTTTTCTCGTTCTTCCTGATTATCCAGCGTTTCTGCTAATGCAGAGAAGGCATAACTGAAGCGACCAATTAACGTCTCCTGCAAATCCGATACtt > 2:897697/1‑140 (MQ=255) aGTCAATGGTAATTGCTGGTTCTTAACAGAAGGTTCGATGGTAAGTTTTTCTCGTTCTTCCTGATTATCCAGCGTTTCTGCTAATGCAGAGAAGGCATAACTGAAGCGACCAATTAACGTCTCCTGCAAATCCGATACtt > 2:279688/1‑140 (MQ=255) aGTCAATGGTAATTGCTGGTTCTTAACAGAAGGTTCGATGGTAAGTTTTTCTCGTTCTTCCTGATTATCCAGCGTTTCTGCTAATGCAGAGAAGGCATAACTGAAGCGACCAATTAACGTCTCCTGCAAATCCGATACtt > 2:348533/1‑140 (MQ=255) aGTCAATGGTAATTGCTGGTTCTTAACAGAAGGTTCGATGGTAAGTTTTTCTCGTTCTTCCTGATTATCCAGCGTTTCTGCTAATGCAGAGAAGGCATAACTGAAGCGACCAATTAACGTCTCCTGCAAATCCGATACtt > 1:1571135/1‑140 (MQ=255) aGTCAATGGTAATTGCTGGTTCTTAACAGAAGGTTCGATGGTAAGTTTTTCTCGTTCTTCCTGATTATCCAGCGTTTCTGCTAATGCAGAGAAGGCAGAACTGAAGCGACCAATTAACGTCTCCTGCAAATCCGATACtt > 1:2130558/1‑140 (MQ=255) aGTCAATGGTAATTGCTGGTTCTTAACAGAAGGTTCGATGGTAAGTTTTTCTCGTTCTTCCTGATTATCCAGCGTTTCTGCTAATGCAGAGAAGGCA‑TACTGAAGCGACCAATTAACGTCTCCTGCAAATCCGATACttt > 1:17680/1‑140 (MQ=255) gTCAATGGTAATTGCTGGTTCTTAACAGAAGGTTCGATGGTAAGTTTTTCTCGTTCTTCCTGATTATCCAGCGTTTCTGCTAATGCAGAGAAGGCATAACTGAAGCGACCAATTAACGTCTCCTGCAAATCCGATACttt > 1:1373169/1‑140 (MQ=255) cAATGGTAATTGCTGGTTCTTAACAGAAGGTTCGATGGTAAGTTTTTCTCGTTCTTCCTGATTATCCAGCGTTTCTGCTAATGCAGAGAAGGCATAACTGAAGCGACCAATTAACGTCTCCTGCAAATCCGATACTTTCg > 2:1312963/1‑140 (MQ=255) aTGGTAATTGCTGGTTCTTAACAGAAGGTTCGATGGTAAGTTTTTCTCGTTCTTCCTGATTATCCAGCGTTTCTGCTAATGCAGAGAAGGCATAACTGAAGCGACCAATTAACGTCTCCTGCAAATCCGATACTTTCGGt < 2:475571/140‑1 (MQ=255) tGGTAATTGCTGGTTCTTAACAGAAGGTTCGATGGTAAGTTTTTCTCGTTCTTCCTGATTATCCAGCGTTTCTGCTAATGCAGAGAAGGCATAACTGAAGCGACCAATTAACGTCTCCTGCAAATCCGATACTTTCGGTg < 1:180780/140‑1 (MQ=255) tGGTAATTGCTGGTTCTTAACAGAAGGTTCGATGGTAAGTTTTTCTCGTTCTTCCTGATTATCCAGCGTTTCTGCTAATGCAGAGAAGGCATAACTGAAGCGACCAATTAACGTCTCCTGCAAATCCGATACTTTCGGTg > 1:466541/1‑140 (MQ=255) tAATTGCTGGTTCTTAACAGAAGGTTCGATGGTAAGTTTTTCTCGTTCTTCCTGATTATCCAGCGTTTCTGCTAATGCAGAGAAGGCATAACTGAAGCGACCAATTAACGTCTCCTGCAAATCCGATACTTTCGGTGCAg < 2:1847124/140‑1 (MQ=255) aTTGCTGGTTCTTAACAGAAGGTTCGATGGTAAGTTTTTCTCGTTCTTCCTGATTATCCAGCGTTTCTGCTAATGCAGAGAAGGCATAACTGAAGCGACCAATTAACGTCTCCTGCAAATCCGATACTTTCGGTGCAGcc < 2:2108919/140‑1 (MQ=255) ttGCTGGTTCTTAACAGAAGGTTCGATGGTAAGTTTTTCTCGTTCTTCCTGATTATCCAGCGTTTCTGCTAATGCAGAGAAGGCATAACTGAAGCGACCAATTAACGTCTCCTGCAAATCCGATACTTTCGGTGCAGc > 1:992228/1‑138 (MQ=255) ttGCTGGTTCTTAACAGAAGGTTCGATGGTAAGTTTTTCTCGTTCTTCCTGATTATCCAGCGTTTCTGCTAATGCAGAGAAGGCATAACTGAAGCGACCAATTAACGTCTCCTGCAAATCCGATACTTTCGGTGCAGCCt < 1:1751863/140‑1 (MQ=255) ttGCTGGTTCTTAACAGAAGGTTCGATGGTAAGTTTTTCTCGTTCTTCCTGATTATCCAGCGTTTCTGCTAATGCAGAGAAGGCATAACTGAAGCGACCAATTAACGTCTCCTGCAAATCCGATACTTTCGGTGCAGCCt > 1:423167/1‑140 (MQ=255) gCTGGTTCTTAACAGAAGGTTCGATGGTAAGTTTTTCTCGTTCTTCCTGATTATCCAGCGTTTCTGCTAATGCAGAGAAGGCATAACTGAAGCGACCAATTAACGTCTCCTGCAAATCCGATACTTTCGGTGCAGCCTGa < 1:775560/140‑1 (MQ=255) tGGTTCTTAACAGAAGGTTCGATGGTAAGTTTTTCTCGTTCTTCCTGATTATCCAGCGTTTCTGCTAATGCAGAGAAGGCATAACTGAAGCGACCAATTAACGTCTCCTGCAAATCCGATACTTTCGGTGCAGCCTg < 1:607566/137‑1 (MQ=255) tGGTTCTTAACAGAAGGTTCGATGGTAAG‑TTTTCTCGTTCTTCCTGATTATCCAGCGTTTCTGCTAATGCAGAGAAGGCATAACTGAAGCGACCAATTAACGTCTCCTGCAAATCCGATACTTTCGGTGCAGCCTGa < 2:567077/137‑1 (MQ=255) tGGTTCTTAACAGAAGGTTCGATGGTAAG‑TTTTCTCGTTCTTCCTGATTATCCAGCGTTTCTGCTAATGCAGAGAAGGCATAACTGAAGCGACCAATTAACGTCTCCTGCAAATCCGATACTTTCGGTGCAGCCTGa > 1:567077/1‑137 (MQ=255) gTTCTTAACAGAAGGTTCGATGGTAAGTTTTTCTCGTTCTTCCTGATTATCCAGCGTTTCTGCTAATGCAGAGAAGGCATAACTGAAGCGACCAATTAACGTCTCCTGCAAATCCGATACTTTCGGTGCAGCCTGACCAt < 2:190759/140‑1 (MQ=255) gTTCTTAACAGAAGGTTCGATGGTAAGTTTTTCTCGTTCTTCCTGATTATCCAGCGTTTCTGCTAATGCAGAGAAGGCAGAACTGAAGCGACCAATTAACGTCTCCTGCAAATCCGATACTTTCGGTGc < 1:1300257/129‑1 (MQ=255) gTTCTTAACAGAAGGTTCGATGGTAAGTTTTTCTCGTTCTTCCTGATTATCCAGCGTTTCTGCTAATGCAGAGAAGGCAGAACTGAAGCGACCAATTAACGTCTCCTGCAAATCCGATACTTTCGGTGCAGCCTGACCAt < 1:986575/140‑1 (MQ=255) gTTCTTAACAGAAGGTTCGATGGTAAGTTTTTCTCGTTCTTCCTGACTATCCAGCGTTTCTGCTAATGCAGAGAAGGCATAACTGAAGCGACCAATTAACGTCTCCTGCAAATCCGATACTTTCGGTGCAGCCTGACCAt < 2:185296/140‑1 (MQ=255) tAACAGAAGGTTCGATGGTAAGTTTTTCTCGTTCTTCCTGATTATCCAGCGTTTCTGCTAATGCAGAGAAGGCATAACTGAAGCGACCAATTAACGTCTCCTGCAAATCCGATACTTTCGGTGCAGCCTGACCATAGATa > 1:798497/1‑140 (MQ=255) gAAGGTTCGATGGTAAGTTTTTCTCGTTCTTCCTGATTATCCAGCGTTTCTGCTAATGCAGAGAAGGCATAACTGAAGCGACCAATTAACGTCTCCTGCAAATCCGATACTTTCGGTGCAGCCTGACCATAGAt < 1:1052236/134‑1 (MQ=255) gAAGGTTCGATGGTAAGTTTTTCTCGTTCTTCCTGATTATCCAGCGTTTCTGCTAATGCAGAGAAGGCATAACTGAAGCGACCAATTAACGTCTCCTGCAAATCCGATACTTTCGGTGCAGCCTGACCATAGAt > 2:1052236/1‑134 (MQ=255) gAAGGTTCGATGGTAAGTTTTTCTCGTTCTTCCTGATTATCCAGCGTTTCTGCTAATGCAGAGAAGGCATAACTGAAGCGACCAATTAACGTCTCCTGCAAATCCGATACTTTCGGTGCAGCCTGACCATAGATAACAtt > 2:1912189/1‑140 (MQ=255) gAAGGTTCGATGGTAAGTTTTTCTCGTTCTTCCTGATTATCCAGCGTTTCTGCTAATGCAGAGAAGGCATAACTGAAGCGACCAATTAACGTCTCCTGCAAATCCGATACTTTCGGTGCAGCCTGACCATAGATAACAtt > 1:1232883/1‑140 (MQ=255) gAAGGTTCGATGGTAAGTTTTTCTCGTTCTTCCTGATTATCCAGCGTTTCTGCTAATGCAGAGAAGGCATAACTGAAGCGACCAATTAACGTCTCCTGCAAATCCGATACTTTCGGTGCAGCCTGACCATAGATAACAtt > 1:1173230/1‑140 (MQ=255) aaGGTTCGATGGTAAGTTTTTCTCGTTCTTCCTGATTATCCAGCGTTTCTGCTAATGCAGAGAAGGCATAACTGAAGCGACCAATTAACGTCTCCTGCAAATCCGATACTTTCGGTGCAGCCTGACCATAGATAACATTc > 2:1930994/1‑140 (MQ=255) aaGGTTCGATGGTAAGTTTTTCTCGTTCTTCCTGATTATCCAGCGTTTCTGCTAATGCAGAGAAGGCATAACTGAAGCGACCAATTAACGTCTCCTGCAAATCCGATACTTTCGGTGCAGCCTGACCATAGATAACATTc > 1:1911555/1‑140 (MQ=255) aaGGTTCGATGGTAAGTTTTTCTCGTTCTTCCTGATTATCCAGCGTTTCTGCTAATGCAGAGAAGGCATAACTGAAGCGACCAATTAACGTCTCCTGCAAATCCGATACTTTCGGTGCAGCCTGACCATAGATAACATTc > 2:757931/1‑140 (MQ=255) aGGTTCGATGGTAAGTTTTTCTCGTTCTTCCTGATTATCCAGCGTTTCTGCTAATGCAGAGAAGGCATAACTGAAGCGACCAATTAACGTCTCCTGCAAATCCGATACTTTCGGTGCAGCCTGACCATAGATAACATTCa > 2:1018955/1‑140 (MQ=255) aGGTTCGATGGTAAGTTTTTCTCGTTCTTCCTGATTATCCAGCGTTTCTGCTAATGCAGAGAAGGCATAACTGAAGCGACCAATTAACGTCTCCTGCAAATCCGATACTTTCGGTGCAGCCTGACCATAGATAACATTCa < 2:2149889/140‑1 (MQ=255) ttCGATGGTAAGTTTTTCTCGTTCTTCCTGATTATCCAGCGTTTCTGCTAATGCAGAGAAGGCATAACTGAAGCGACCAATTAACGTCTCCTGCAAATCCGATACTTTCGGTGCAGCCTGACCATAGATAACATTCATgg < 2:43132/140‑1 (MQ=255) tCGATGGTAAGTTTTTCTCGTTCTTCCTGATTATCCAGCGTTTCTGCTAATGCAGAGAAGGCATAACTGAAGCGACCAATTAACGTCTCCTGCAAATCCGATACTTTCGGTGCAGCCTGACCATAGATAACATTCATGGc > 1:949072/1‑140 (MQ=255) tCGATGGTAAGTTTTTCTCGTTCTTCCTGATTATCCAGCGTTTCTGCTAATGCAGAGAAGGCATAACTGAAGCGACCAATTAACGTCTCCTGCAAATCCGATACTTTCGGTGCAGCCTGACCATAGATAACATTCATGGc > 1:1626391/1‑140 (MQ=255) cGATGGTAAGTTTTTCTCGTTCTTCCTGATTATCCAGCGTTTCTGCTAATGCAGAGAAGGCATAACTGAAGCGACCAATTAACGTCTCCTGCAAATCCGATACTTTCGGTGCAGCCTGACCATAGATAACATTCATGGCa < 2:1201020/140‑1 (MQ=255) cGATGGTAAGTTTTTCTCGTTCTTCCTGATTATCCAGCGTTTCTGCTAATGCAGAGAAGGCATAACTGAAGCGACCAATTAACGTCTCCTGCAAATCCGATACTTTCGGTGCAGCCTGACCATAGATAACATTCATGGCa < 2:949072/140‑1 (MQ=255) cGATGGTAAGTTTTTCTCGTTCTTCCTGATTATCCAGCGTTTCTGCTAATGCAGAGAAGGCATAACTGAAGCGACCAATTAACGTCTCCTGCAAATCCGATACTTTCGGTGCAGCCTGACCATAGATAACATTCATGGCa < 2:619015/140‑1 (MQ=255) cGATGGTAAGTTTTTCTCGTTCTTCCTGATTATCCAGCGTTTCTGCTAATGCAGAGAAGGCATAACTGAAGCGACCAATTAACGTCTCCTGCAAATCCGATACTTTCGGTGCAGCCTGACCATAGATAACATTCATGGCa < 1:757931/140‑1 (MQ=255) cGATGGTAAGTTTTTCTCGTTCTTCCTGATTATCCAGCGTTTCTGCTAATGCAGAGAAGGCATAACTGAAGCGACCAATTAACGTCTCCTGCAAATCCGATACTTTCGGTGCAGCCTGACCATAGATAACATTCATGGCa < 1:348533/140‑1 (MQ=255) cGATGGTAAGTTTTTCTCGTTCTTCCTGATTATCCAGCGTTTCTGCTAATGCAGAGAAGGCATAACTGAAGCGACCAATTAACGTCTCCTGCAAATCCGATACTTTCGGTGCAGCCTGACCATAGATAACATTCATGGCa < 2:464741/140‑1 (MQ=255) cGATGGTAAGTTTTTCTCGTTCTTCCTGATTATCCAGCGTTTCTGCTAATGCAGAGAAGGCATAACTGAAGCGACCAATTAACGTCTCCTGCAAATCCGATACTTTCGGTGCAGCCTGACCATAGATAACATTCATGGCa < 1:1646241/140‑1 (MQ=255) cGATGGTAAGTTTTTCTCGTTCTTCCTGATTATCCAGCGTTTCTGCTAATGCAGAGAAGGCATAACTGAAGCGACCAATTAACGTCTCCTGCAAATCCGATACTTTCGGTGCAGCCTGACCATAGATAACATTCATGGCa < 2:1626391/140‑1 (MQ=255) cGATGGTAAGTTTTTCTCGTTCTTCCTGATTATCCAGCGTTTCTGCTAATGCAGAGAAGGCATAACTGAAGCGACCAATTAACGTCTCCTGCAAATCCGATACTTTCGGTGCAGCCTGACCATAGATAACATTCATGGCa < 1:1851106/140‑1 (MQ=255) cGATGGTAAGTTTTTCTCGTTCTTCCTGATTATCCAGCGTTTCTGCTAATGCAGAGAAGGCATAACTGAAGCGACCAATTAACGTCTCCTGCAAATCCGATACTTTCGGTGCAGCCTGACCATAGATAACATTCATGGCa < 2:1809496/140‑1 (MQ=255) aTGGTAAGTTTTTCTCGTTCTTCCTGATTATCCAGCGTTTCTGCTAATGCAGAGAAGGCATAACTGAAGCGACCAATTAACGTCTCCTGCAAATCCGATACTTTCGGTGCAGCCTGACCATAGATAACATTCATGGCAtt > 1:2010849/1‑140 (MQ=255) tAAGTTTTTCTCGTTCTTCCTGATTATCCAGCGTTTCTGCTAATGCAGAGAAGGCATAACTGAAGCGACCAATTAACGTCTCCTGCAAATCCGATACTTTCGGTGCAGCCTGACCATAGATAACATTCATGGCATTGTta > 2:96743/1‑140 (MQ=255) aGTTTTTCTCGTTCTTCCTGATTATCCAGCGTTTCTGCTAATGCAGAGAAGGCATAACTGAAGCGACCAATTAACGTCTCCTGCAAATCCGATACTTTCGGTGCAGCCTGACCATAGATAACATTCATGGc < 1:1217773/131‑1 (MQ=255) aGTTTTTCTCGTTCTTCCTGATTATCCAGCGTTTCTGCTAATGCAGAGAAGGCATAACTGAAGCGACCAATTAACGTCTCCTGCAAATCCGATACTTTCGGTGCAGCCTGACCATAGATAACATTCATGGc > 2:1217773/1‑131 (MQ=255) aGTTTTTCTCGTTCTTCCTGATTATCCAGCGTTTCTGCTAATGCAGAGAAGGCATAACTGAAGCGACCAATTAACGTCTCCTGCAAATCCGATACTTTCGGTGCAGCCTGACCATAGATAACATTCATGGCATTGTtata > 2:1869048/1‑140 (MQ=255) ttCTCGTTCTTCCTGATTATCCAGCGTTTCTGCTAATGCAGAGAAGGCATAACTGAAGCGACCAATTAACGTCTCCTGCAAATCCGATACTTTCGGTGCAGCCTGACCATAGATAACATTCATGGCATTGTTATAGCCAg > 2:2006823/1‑140 (MQ=255) tcCTGATTATCCAGCGTTTCTGCTAATGCAGAGAAGGCATAACTGAAGCGACCAATTAACGTCTCCTGCAAATCCGATACTTTCGGTGCAGCCTGACCATAGATAACATTCATGGCATTGTTATAGCCAGCAATTTGccc < 1:897697/140‑1 (MQ=255) aTCCAGCGTTTCTGCTAATGCAGAGAAGGCAGAACTGAAGCGACCAATTAACGTCTCCTGCAAATCCGATACTTTCGGTGCAGCCTGACCATAGATAACATTCATGGCATTGTTATAGCCAGCAATTTGCCCCACGTCgg < 2:2130558/140‑1 (MQ=255) tCCAGCGTTTCTGCTAATGCAGAGAAGGCATAACTGAAGCGACCAATTAACGTCTCCTGCAAATCCGATACTTTCGGTGCAGCCTGACCATAGATAACATTCATGGCATTGTTATAGCCAGCAATTTGCCCCACGTCggg > 2:1792960/1‑140 (MQ=255) tCCAGCGTTTCTGCTAATGCAGAGAAGGCATAACTGAAGCGACCAATTAACGTCTCCTGCAAATCCGATACTTTCGGTGCAGCCTGACCATAGATAACATTCATGGCATTGTTATAGCCAGCAATTTGCCCCACGTCggg > 1:421049/1‑140 (MQ=255) tCCAGCGTTTCTGCTAATGCAGAGAAGGCATAACTGAAGCGACCAATTAACGTCTCCTGCAAATCCGATACTTTCGGTGCAGCCTGACCATAGATAACATTCATGGCATTGTTATAGCCAGCAATTTGCCCCACGTCggg < 2:1373169/140‑1 (MQ=255) tCCAGCGTTTCTGCTAATGCAGAGAAGGCATAACTGAAGCGACCAATTAACGTCTCCTGCAAATCCGATACTTTCGGTGCAGCCTGACCATAGATAACATTCATGGCATTGTTATAGCCAGCAATTTGCCCCACGTCggg > 2:1485628/1‑140 (MQ=255) tCCAGCGTTTCTGCTAATGCAGAGAAGGCAGAACTGAAGCGACCAATTAACGTCTCCTGCAAATCCGATACTTTCGGTGCAGCCTGACCATAGATAACATTCATGGCATTGTTATAGCCAGCAATTTGCCCCACGTCggg > 2:1033174/1‑140 (MQ=255) cAGCGTTTCTGCTAATGCAGAGAAGGCATAACTGAAGCGACCAATTAACGTCTCCTGCAAATCCGATACTTTCGGTGCAGCCTGACCATAGATAACATTCATGGCATTGTTATAGCCAGCAATTTGCCCCACGTCGGGCt < 2:2051872/140‑1 (MQ=255) gCGTTTCTGCTAATGCAGAGAAGGCATAACTGAAGCGACCAATTAACGTCTCCTGCAAATCCGATACTTTCGGTGCAGCCTGACCATAGATAACATTCATGGCATTGTTATAGCCAGCAATTTGCCCCACGTCGGGCTGa < 1:1912189/140‑1 (MQ=255) gCGTTTCTGCTAATGCAGAGAAGGCAGAACTGAAGCGACCAATTAACGTCTCCTGCAAATCCGATACTTTCGGTGCAGCCTGACCATAGATAACATTCATGGCATTGTTATAGCCAGCAATTTGCCCCACGTCGGGCTGa < 2:1597341/140‑1 (MQ=255) cGTTTCTGCTAATGCAGAGAAGGCATAACTGAAGCGACCAATTAACGTCTCCTGCAAATCCGATACTTTCGGTGCAGCCTGACCATAGATAACATTCATGGCATTGTTATAGCCAGCAATTTGCCCCACGTCGGGCTGAg > 1:1963662/1‑140 (MQ=255) gTTTCTGCTAATGCAGAGAAGGCATAACTGAAGCGACCAATTAACGTCTCCTGCAAATCCGATACTTTCGGTGCAGCCTGACCATAGATAACATTCATGGCATTGTTATAGCCAGCAATTTGCCCCACGTCggg > 1:1568703/1‑134 (MQ=255) gTTTCTGCTAATGCAGAGAAGGCATAACTGAAGCGACCAATTAACGTCTCCTGCAAATCCGATACTTTCGGTGCAGCCTGACCATAGATAACATTCATGGCATTGTTATAGCCAGCAATTTGCCCCACGTCggg < 2:1568703/134‑1 (MQ=255) gTTTCTGCTAATGCAGAGAAGGCATAACTGAAGCGACCAATTAACGTCTCCTGCAAATCCGATACTTTCGGTGCAGCCTGACCATAGATAACATTCATGGCATTGTTATAGCCAGCAATTTGCCCCACGTCGGGCTGAGt > 2:824705/1‑140 (MQ=255) tttCTGCTAATGCAGAGAAGGCATAACTGAAGCGACCAATTAACGTCTCCTGCAAATCCGATACTTTCGGTGCAGCCTGACCATAGATAACATTCATGGCATTGTTATAGCCAGCAATTTGCCCCACGTCggg < 2:1236006/133‑1 (MQ=255) tttCTGCTAATGCAGAGAAGGCATAACTGAAGCGACCAATTAACGTCTCCTGCAAATCCGATACTTTCGGTGCAGCCTGACCATAGATAACATTCATGGCATTGTTATAGCCAGCAATTTGCCCCACGTCGGGCTGAGTg > 1:1589331/1‑140 (MQ=255) tCTGCTAATGCAGAGAAGGCATAACTGAAGCGACCAATTAACGTCTCCTGCAAATCCGATACTTTCGGTGCAGCCTGACCATAGATAACATTCATGGCATTGTTATAGCCAGCAATTTGCCCCACGTCGGGCTGAGTGAt < 2:440716/140‑1 (MQ=255) tCTGCTAATGCAGAGAAGGCATAACTGAAGCGACCAATTAACGTCTCCTGCAAATCCGATACTTTCGGTGCAGCCTGACCATAGATAACATTCATGGCATTGTTATAGCCAGCAATTTGCCCCACGTCGGGCTGAGTGAt < 2:100956/140‑1 (MQ=255) aaTGCAGAGAAGGCATAACTGAAGCGACCAATTAACGTCTCCTGCAAATCCGATACTTTCGGTGCAGCCTGACCATAGATAACATTCATGGCATTGTTATAGCCAGCAATTTGCCCCACGTCGGGCTGAGTGATAATTGc > 1:1397572/1‑140 (MQ=255) cAGAGAAGGCATAACTGAAGCGACCAATTAACGTCTCCTGCAAATCCGATACTTTCGGTGCAGCCTGACCATAGATAACATTCATGGCATTGTTATAGCCAGCAATTTGCCCCACGTCGGGCTGAGTGATAATTGCTGtt < 1:2006823/140‑1 (MQ=255) agaAGGCAGAACTGAAGCGACCAATTAACGTCTCCTGCAAATCCGATACTTTCGGTGCAGCCTGACCATAGATAACATTCATGGCATTGTTATAGCCAGCAATTTGCCCCACGTCGGGCTGAGTGATAATTGCTGTTGAc > 2:1354220/1‑140 (MQ=255) gaAGGCATAACTGAAGCGACCAATTAACGTCTCCTGCAAATCCGATACTTTCGGTGCAGCCTGACCATAGATAACATTCATGGCATTGTTATAGCCAGCAATTTGCCCCACGTCGGGCTGAGTGATAATTGCTGTTGACg < 1:1930994/140‑1 (MQ=255) gaAGGCATAACTGAAGCGACCAATTAACGTCTCCTGCAAATCCGATACTTTCGGTGCAGCCTGACCATAGATAACATTCATGGCATTGTTATAGCCAGCAATTTGCCCCACGTCGGGCTGAGTGATAATTGCTGTTGACg < 1:1022775/140‑1 (MQ=255) ggCATAACTGAAGCGACCAATTAACGTCTCCTGCAAATCCGATACTTTCGGTGCAGCCTGACCATAGATAACATTCATGGCATTGTTATAGCCAGCAATTTGCCCCACGTCGGGCTGAGTGATAATTGCTGTTGACGTcc > 1:2116843/1‑140 (MQ=255) | TGCGCCCTCTGCAGTTTGCCCAACATAAGAAACAGTCAATGGTAATTGCTGGTTCTTAACAGAAGGTTCGATGGTAAGTTTTTCTCGTTCTTCCTGATTATCCAGCGTTTCTGCTAATGCAGAGAAGGCAGAACTGAAGCGACCAATTAACGTCTCCTGCAAATCCGATACTTTCGGTGCAGCCTGACCATAGATAACATTCATGGCATTGTTATAGCCAGCAATTTGCCCCACGTCGGGCTGAGTGATAATTGCTGTTGACGTCC > NC_000913/2097870‑2098135 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |